Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	effect	AA_change	Repeat	AD1019_dx
MT	3796	A->G	+	ENSG00000198888	MT-ND1	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	1
MT	15326	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	1
12	897487	A->G	+	ENSG00000060237	WNK1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.466667
X	1303297	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.176471
X	1303329	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.538462
X	1303335	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.357143
X	1303336	A->G	+	ENSG00000198223	CSF2RA	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.142857
X	1389690	A->G	-	ENSG00000169100	SLC25A6	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.463362
X	1435756	A->G	-	ENSG00000169093	ASMTL	protein_coding	CDS	splice_region_variant&synonymous_variant	p.Thr->Thr	Alu	0.428571
19	1799652	A->G	-	ENSG00000130270	ATP8B3	protein_coding	Intron	stop_lost	p.Ter->Trp	Alu	0.0625
19	1799664	A->G	-	ENSG00000130270	ATP8B3	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0571429
19	1799681	A->G	-	ENSG00000130270	ATP8B3	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.0625
19	1799688	A->G	-	ENSG00000130270	ATP8B3	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0625
19	1799730	A->G	-	ENSG00000130270	ATP8B3	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.0689655
X	2221159	A->G	-	ENSG00000169084	DHRSX	protein_coding	CDS	missense_variant	p.His->Arg	Alu	1
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.425532
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.145833
4	2938309	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.097561
12	6638308	A->G	-	ENSG00000111644	ACRBP	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.24
12	6824621	A->G	+	ENSG00000250510	GPR162	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	1
12	7097002	A->G	-	ENSG00000139178	C1RL	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	1
12	7496888	A->G	-	ENSG00000177575	CD163	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	1
12	7936170	A->G	-	ENSG00000059804	SLC2A3	protein_coding	five_prime_utr	upstream_gene_variant	.	Alu	1
12	8515301	A->G	+	ENSG00000166527	CLEC4D	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.615385
3	10043852	A->G	+	ENSG00000144554	FANCD2	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	1
6	12037770	A->G	+	ENSG00000095951	HIVEP1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.357143
3	15251166	A->G	+	ENSG00000131375	CAPN7	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.489362
4	15723435	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	splice_region_variant&synonymous_variant	p.Ser->Ser	Alu	0.214286
4	15723455	A->G	+	ENSG00000109743	BST1	protein_coding	Intron	stop_lost	p.Ter->Trp	Alu	0.5625
17	15986849	A->G	-	ENSG00000214941	ZSWIM7	protein_coding	three_prime_utr	stop_lost	p.Ter->Trp	Alu	0.384615
11	17076518	A->G	-	ENSG00000110700	RPS13	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.181818
10	17318710	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.619048
10	17318717	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.388889
10	17318718	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.333333
6	17951412	A->G	-	ENSG00000137177	KIF13A	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.0666667
19	18071260	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.125
19	18071296	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.16
19	18071320	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.342857
19	18173937	A->G	+	ENSG00000216490	IFI30	protein_coding	exon	synonymous_variant	p.Leu->Leu	Alu	0.0866209
16	18868647	A->G	-	ENSG00000157106	SMG1	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	1
16	18896930	A->G	-	ENSG00000157106	SMG1	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.395349
22	19441667	A->G	-	ENSG00000100084	HIRA	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.0235294
19	21189884	A->G	+	ENSG00000196705	ZNF431	protein_coding	exon	missense_variant	p.His->Arg	Alu	0.181818
22	22322827	A->G	+	ENSG00000211644	IGLV1-51	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.107143
22	22369838	A->G	+	ENSG00000211649	IGLV7-46	IG_V_gene	CDS	synonymous_variant	p.Gly->Gly	Alu	0.142857
22	22698308	A->G	+	ENSG00000211660	IGLV2-23	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.190476
22	22712982	A->G	+	ENSG00000211662	IGLV3-21	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.2
22	22720912	A->G	+	ENSG00000211663	IGLV3-19	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.25
22	22721067	A->G	+	ENSG00000211663	IGLV3-19	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.125
22	22758986	A->G	+	ENSG00000211666	IGLV2-14	IG_V_gene	CDS	synonymous_variant	p.Gly->Gly	Alu	0.0697674
19	23359502	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.0833333
18	26081293	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.133333
18	26081328	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.214286
12	27654803	A->G	+	ENSG00000110841	PPFIBP1	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.119048
15	28146325	A->G	-	ENSG00000128731	HERC2	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.583333
6	31271074	A->G	-	ENSG00000204525	HLA-C	protein_coding	exon	splice_region_variant&synonymous_variant	p.Ala->Ala	Alu	1
6	32581698	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	CDS	missense_variant	p.Met->Val	Alu	1
6	32641522	A->G	+	ENSG00000196735	HLA-DQA1	protein_coding	exon	missense_variant	p.Met->Val	Alu	0.2
1	32673567	A->G	+	ENSG00000162521	RBBP4	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.166667
1	32673577	A->G	+	ENSG00000162521	RBBP4	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.142857
6	32761662	A->G	-	ENSG00000232629	HLA-DQB2	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	1
18	35245561	A->G	+	ENSG00000186812	ZNF397	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.3
20	35713827	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0357143
20	35713838	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0344828
3	38140549	A->G	+	ENSG00000172936	MYD88	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0851064
19	39885865	A->G	-	ENSG00000275395	FCGBP	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.4
X	40709372	A->G	-	ENSG00000180182	MED14	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0545455
13	40951694	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.153846
13	40951697	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.214286
13	40951700	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.142857
13	45516235	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0681818
13	45516236	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.26087
19	45701886	A->G	+	ENSG00000011478	QPCTL	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.130435
20	45802004	A->G	+	ENSG00000101457	DNTTIP1	protein_coding	CDS	synonymous_variant	p.Lys->Lys	Alu	0.056338
1	46193386	A->G	-	ENSG00000085998	POMGNT1	protein_coding	exon	splice_region_variant&synonymous_variant	p.Glu->Glu	Alu	0.647059
22	46292235	A->G	+	ENSG00000075234	TTC38	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.125
3	49360949	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.125
3	49360951	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.08
19	49931109	A->G	+	ENSG00000169136	ATF5	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.222222
10	49942262	A->G	+	ENSG00000204152	TIMM23B	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.210526
19	51128414	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	splice_region_variant&synonymous_variant	p.Val->Val	Alu	0.0540541
3	52749755	A->G	-	ENSG00000114904	NEK4	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.0666667
12	53296435	A->G	+	ENSG00000123349	PFDN5	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.380952
19	54221229	A->G	-	ENSG00000204577	LILRB3	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	1
19	54222121	A->G	-	ENSG00000204577	LILRB3	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.307692
19	54222756	A->G	-	ENSG00000204577	LILRB3	protein_coding	CDS	missense_variant	p.Met->Val	Alu	1
19	54241806	A->G	-	ENSG00000244482	LILRA6	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.775
19	54596482	A->G	+	ENSG00000104974	LILRA1	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.360515
7	56078966	A->G	+	ENSG00000129103	SUMF2	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0909091
7	56078974	A->G	+	ENSG00000129103	SUMF2	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.0909091
7	56079014	A->G	+	ENSG00000129103	SUMF2	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.125
15	63529092	A->G	+	ENSG00000140455	USP3	protein_coding	five_prime_utr	non_coding_transcript_exon_variant	.	Alu	0.0434783
15	63530518	A->G	+	ENSG00000140455	USP3	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.166667
11	64219583	A->G	+	ENSG00000149781	FERMT3	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.0571429
17	64350416	A->G	-	ENSG00000261371	PECAM1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.461951
17	64869127	A->G	-	ENSG00000176809	LRRC37A3	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.928571
17	68256848	A->G	+	ENSG00000196704	AMZ2	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.307692
12	68766670	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.2
12	68766805	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.3
12	68766819	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.25
12	68766820	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.333333
12	68766837	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.222222
X	71463838	A->G	+	ENSG00000147133	TAF1	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.0833333
2	73732585	A->G	-	ENSG00000144034	TPRKB	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0454545
2	73732587	A->G	-	ENSG00000144034	TPRKB	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.0454545
16	74299614	A->G	+	ENSG00000103035	PSMD7	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0689655
16	74637928	A->G	-	ENSG00000168411	RFWD3	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.0666667
7	74778357	A->G	+	ENSG00000158517	NCF1	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.0645161
17	81563959	A->G	-	ENSG00000182446	NPLOC4	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.0869565
16	88033197	A->G	+	ENSG00000172530	BANP	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	0.333333
2	88885984	A->G	+	ENSG00000211598	IGKV4-1	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0961538
2	88886002	A->G	+	ENSG00000211598	IGKV4-1	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0615385
2	88897489	A->G	+	ENSG00000211599	IGKV5-2	IG_V_gene	Intergenic	missense_variant&splice_region_variant	p.Asp->Gly	Alu	0.166667
2	88947406	A->G	-	ENSG00000243466	IGKV1-5	IG_V_gene	CDS	synonymous_variant	p.Ser->Ser	Alu	0.0625
1	89020144	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.291667
1	89020153	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0769231
1	89020179	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0714286
1	89020203	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.285714
2	89117625	A->G	-	ENSG00000240382	IGKV1-17	IG_V_gene	CDS	missense_variant	p.Asp->Gly	Alu	0.0652174
2	89213700	A->G	-	ENSG00000244575	IGKV1-27	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.130435
2	89947971	A->G	+	ENSG00000243264	IGKV2D-29	IG_V_gene	CDS	missense_variant	p.Asp->Gly	Alu	0.230769
10	90902279	A->G	+	ENSG00000148688	RPP30	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.0740741
10	90902318	A->G	+	ENSG00000148688	RPP30	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.103448
1	93158861	A->G	-	ENSG00000117500	TMED5	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0833333
10	94607959	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	synonymous_variant	p.Ser->Ser	Alu	0.214286
10	94607972	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	missense_variant	p.Thr->Ala	Alu	0.166667
14	95193319	A->G	-	ENSG00000165959	CLMN	protein_coding	Intron	splice_region_variant&synonymous_variant	p.Lys->Lys	Alu	0.7
2	95899186	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.153846
2	95899211	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.169811
2	95904765	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	synonymous_variant	p.Arg->Arg	Alu	0.0980392
2	95904788	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.142857
2	95904802	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.163636
2	95904827	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.159091
2	95912299	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	synonymous_variant	p.Lys->Lys	Alu	0.111111
4	98886511	A->G	-	ENSG00000151247	EIF4E	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.117647
7	99493532	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	synonymous_variant	p.Leu->Leu	Alu	0.0344828
7	100435673	A->G	-	ENSG00000241357	AC092849.2	antisense	CDS	synonymous_variant	p.Lys->Lys	Alu	0.263158
8	102829408	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.278481
8	102829409	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0867993
14	103579448	A->G	+	ENSG00000256053	APOPT1	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.2
14	103579449	A->G	+	ENSG00000256053	APOPT1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.272727
14	105940038	A->G	-	ENSG00000211933	IGHV6-1	IG_V_gene	CDS	synonymous_variant	p.Ser->Ser	Alu	0.272727
14	106116935	A->G	-	ENSG00000211941	IGHV3-11	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.157895
14	106153928	A->G	-	ENSG00000211943	IGHV3-15	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.0754717
14	106810859	A->G	-	ENSG00000224650	IGHV3-74	IG_V_gene	CDS	missense_variant	p.Ile->Val	Alu	0.0714286
2	108758496	A->G	+	ENSG00000153201	RANBP2	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	1
2	112324194	A->G	+	ENSG00000188177	ZC3H6	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.588235
1	120168929	A->G	-	ENSG00000265808	SEC22B	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.193182
12	122769036	A->G	+	ENSG00000139726	DENR	protein_coding	CDS	splice_region_variant&synonymous_variant	p.Val->Val	Alu	0.0544218
10	124762529	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.0666667
10	125826630	A->G	+	ENSG00000107949	BCCIP	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.625
7	128502637	A->G	+	ENSG00000165055	METTL2B	protein_coding	exon	synonymous_variant	p.Thr->Thr	Alu	0.111111
10	133300492	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.117647
10	133300530	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0833333
9	134048094	A->G	-	ENSG00000169925	BRD3	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0714286
5	144169846	A->G	-	ENSG00000145817	YIPF5	protein_coding	Intergenic	missense_variant&splice_region_variant	p.Lys->Arg	Alu	0.0533333
1	150748246	A->G	-	ENSG00000163131	CTSS	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	exon	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.020202
1	161589617	A->G	+	ENSG00000273112	AL590385.2	processed_transcript	CDS	synonymous_variant	p.Gln->Gln	Alu	0.15625
4	189957425	A->G	+	ENSG00000109536	FRG1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.947826
2	201154148	A->G	+	ENSG00000003402	CFLAR	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.142857
2	201154192	A->G	+	ENSG00000003402	CFLAR	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.2
2	201154209	A->G	+	ENSG00000003402	CFLAR	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.181818
2	218385460	A->G	+	ENSG00000018280	SLC11A1	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.0923077
2	218574082	A->G	+	ENSG00000144580	CNOT9	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.142857
1	220057912	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	stop_lost	p.Ter->Trp	Alu	0.25
1	225786879	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.153846
1	225786912	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.3125
1	225786943	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0909091
1	247100415	A->G	-	ENSG00000188295	ZNF669	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.0555556
1	247100417	A->G	-	ENSG00000188295	ZNF669	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.0810811
19	2291978	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.3
10	16437386	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.277778
6	26172460	A->G	+	ENSG00000274290	HIST1H2BE	protein_coding	five_prime_utr	.	.	Alu	0.0740741
21	37410605	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.25
12	56731526	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.3
12	56731538	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.166667
16	57174182	A->G	-	ENSG00000172775	FAM192A	protein_coding	five_prime_utr	.	.	Alu	0.117647
16	57174194	A->G	-	ENSG00000172775	FAM192A	protein_coding	five_prime_utr	.	.	Alu	0.117647
12	57487798	A->G	+	ENSG00000123329	ARHGAP9	protein_coding	five_prime_utr	.	.	Alu	0.2
11	62840107	A->G	-	ENSG00000133316	WDR74	protein_coding	five_prime_utr	.	.	Alu	0.133333
7	66740100	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.0967742
7	66740101	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.1
7	66740125	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.0350877
10	72220101	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0909091
10	72220134	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0677966
10	72220165	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0675676
10	72220174	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0375
10	72220179	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0561798
10	72220182	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.101124
10	72220186	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0681818
10	72220209	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0224719
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.5
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.32967
4	86932235	A->G	-	ENSG00000285458	AC093827.5	protein_coding	five_prime_utr	.	.	Alu	0.142857
14	92118887	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.05
14	92118922	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.3
3	150618776	A->G	+	ENSG00000198843	SELENOT	protein_coding	five_prime_utr	.	.	Alu	0.0410959
3	179325151	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0833333
3	179325235	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0888889
16	587945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383388	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1383415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
X	1383451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383455	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1383460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.470588
X	1383461	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
X	1383483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
X	1383515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	1383593	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	1383594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
X	1383794	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
X	1384034	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1384038	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1384083	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1384085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
X	1384147	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
X	1385005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
X	1385022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1385087	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
X	1385218	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	1385224	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
1	1886300	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1886304	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2292569	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2292752	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2293145	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2293942	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.285714
19	2293948	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.583333
19	2293976	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.230769
19	2294034	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.230769
17	2600318	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
X	2724560	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2744183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2744227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	2744255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
18	2851355	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.125
9	3501629	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.1875
9	3501653	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.294118
9	3501654	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.166667
9	3501760	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.133333
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.3
11	3794677	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.25
6	4036805	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.461538
20	4819060	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.111111
3	5127973	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.15
20	5563164	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0930233
20	5601507	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.217391
20	5601533	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5601569	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.208333
7	6397733	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.125
7	6397750	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.230769
7	6397779	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.454545
9	6488055	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.181818
9	6488062	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.166667
7	6751877	A->G	+	ENSG00000187953	PMS2CL	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
12	7724787	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
12	7724959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
12	7724960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
12	7725357	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
12	7725447	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
12	7725470	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	7725492	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
12	7728302	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
12	7923426	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.185185
12	7923493	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.125
12	7923563	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.25
12	7923600	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.166667
12	7923842	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.423077
12	7923907	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.117647
12	7923933	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.09375
12	7923936	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0588235
12	7923975	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.333333
12	7923986	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0909091
20	8141476	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
19	8540544	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.181818
19	8541718	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.466667
12	8943153	A->G	-	ENSG00000003056	M6PR	protein_coding	Intergenic	.	.	Alu	0.769231
11	9263313	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.636364
2	9507774	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9507851	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.368421
2	9507877	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.210526
2	9507906	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.166667
2	9513080	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9523999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3125
1	9927385	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.12
1	9927387	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.08
1	9927390	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.111111
1	9927412	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0833333
1	9927426	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
1	9927518	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.136364
1	9927573	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.173913
1	9927582	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.277778
1	9927874	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.5
1	9927893	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9927894	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.6
1	9927902	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9927945	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0833333
1	9927962	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0625
1	9928037	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.142857
1	9928049	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.375
1	9928055	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0740741
1	9928072	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.105263
1	9928080	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9928089	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.428571
1	9928110	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.25
1	9928123	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.142857
1	9928132	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.538462
1	9928632	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.204082
1	9928633	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.346939
1	9928634	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.176471
1	9928660	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.047619
1	9928691	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.111111
1	9928776	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.08
1	9928791	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.153846
1	9928793	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.181818
1	9928794	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0909091
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.387097
3	10152248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0888889
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0652174
3	10152284	A->G	+	.	.	.	Intergenic	.	.	Alu	0.113208
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.346154
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.183333
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.109091
3	10152351	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.275862
3	10152557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.690476
3	10152573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0731707
3	10152587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.146341
3	10152592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.119048
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.348837
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.228571
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.483871
3	10152658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10152659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	10152689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.291667
3	10152692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	10152704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	10152721	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
3	10152733	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	10152737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	10152742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.411765
3	10152751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.555556
3	10152752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.578947
3	10152764	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
3	10152866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.225806
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	10152887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
3	10152888	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
3	10152910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
3	10152957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10152965	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	10152967	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
3	10153022	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.192308
3	10153060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.208333
3	10153069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
3	10153126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
3	10153128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.206897
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.131579
3	10153198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.175439
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.301587
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
3	10153238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0512821
3	10153266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
3	10153299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10153300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
3	10153349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10153350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
3	10153379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.448276
3	10153414	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
5	10368369	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.2
5	10368371	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.52381
5	10368375	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.227273
5	10368423	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.272727
5	10368782	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.230769
5	10759982	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.181818
19	10930619	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.2
19	10930855	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.105263
19	10930979	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.25
19	10930981	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.363636
19	10932938	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.769231
19	11107993	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.2
19	11450009	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.210526
19	11450010	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.421053
19	11450020	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.157895
19	11450051	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.857143
19	11450083	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.153846
19	11450402	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.3
19	11450409	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.75
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.62069
19	11450427	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.107143
19	11450429	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.0645161
12	11660479	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.214286
8	11825317	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.133333
18	12031271	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.5
18	12031272	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.3
18	12031424	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.3
19	12941191	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0416667
19	12941878	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0857143
Y	13395391	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.363636
Y	13395556	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.4
Y	13395563	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.428571
11	13703891	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.111111
11	13703892	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.117647
11	13703915	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.266667
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.3125
19	13837503	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0364964
19	13837515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0517241
19	13837516	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0630631
19	13837543	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0561798
19	13837884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0277778
19	13837899	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0237288
19	13837902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103093
19	13837925	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0229358
19	13838025	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0387597
19	13838043	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0222222
19	13838055	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0582524
19	13838061	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0265487
19	13838083	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0506329
19	13838119	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0305344
19	13838162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.114519
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.231707
19	13838188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.074813
19	13838286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0302013
19	13838291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115894
19	13838300	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0227273
19	13838303	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0247934
19	13838304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0222222
19	13838380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428125
19	13838386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0627063
19	13838453	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
19	13838492	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0314961
6	14121360	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.428571
6	14121399	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0705882
6	14121438	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.179487
6	14121439	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0886076
6	14121445	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0344828
19	14389573	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14389655	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.2
19	14389724	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.117647
19	14398414	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14399664	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.105263
10	14595522	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.208333
5	14715196	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.636364
10	14906966	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.0606061
10	14907007	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.09375
10	14907135	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.2
10	14907136	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.2
10	14907139	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.142857
6	15254830	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15254853	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15254854	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.259259
6	15254895	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.05
6	15254921	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.075
6	15254922	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0714286
6	15254931	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0666667
6	15270820	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.105263
3	15410753	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.454545
3	15410783	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.5
3	15410786	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.363636
3	15410787	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.181818
1	15692076	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.181818
16	15700515	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.310345
16	15700516	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.1
16	15700581	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.1875
16	15700685	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.384615
16	15700686	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.461538
16	15700725	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.3
16	15701100	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.272727
16	15701116	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.0869565
16	15701139	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.0869565
16	15701182	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.176471
16	15701186	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.4375
16	15701187	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.3125
19	16080635	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16080691	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16080692	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1875
19	16080741	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16080744	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16080753	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16082839	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16082845	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0952381
19	16082907	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.2
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1875
19	16083257	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.5
19	16083258	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.384615
19	16083297	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16083323	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16083324	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.222222
19	16083395	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.130435
19	16083396	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0869565
19	16084068	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.333333
19	16084109	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16085208	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.3
19	16085318	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.115385
19	16085486	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0909091
17	16383008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
17	16383291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
17	16383909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	16637422	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.3
19	16637423	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16642314	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
11	16740941	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.133333
11	16740950	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.153846
11	16740962	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.461538
11	16756395	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.545455
11	16756409	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.333333
11	16756435	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.166667
11	16756436	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.333333
11	16756451	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.375
11	16756476	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.833333
11	16756530	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.285714
11	16756531	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.538462
11	16756647	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.230769
11	16756722	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.375
11	16756723	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.733333
11	16756898	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
11	17076686	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.217391
19	17084609	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	17103794	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.538462
19	17103807	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.4
19	17105253	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.272727
10	17217017	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.115385
10	17217058	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.153846
10	17217365	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.0294118
11	17334798	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.3
11	17336078	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	17336084	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.266667
11	17336100	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.357143
11	17336108	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	17336123	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.285714
11	17336126	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.384615
11	17336132	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.25
11	17336171	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.5
11	17336172	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.117647
11	17336178	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.25
11	17336190	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.357143
11	17336205	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	17337040	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	17337041	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17337045	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.277778
11	17337068	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17337070	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	17337082	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.75
11	17337176	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.178571
11	17337193	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.259259
11	17337887	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.176471
10	17687378	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.642857
17	18272753	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.45
17	18272776	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.166667
17	18272804	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.181818
17	18273884	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.105263
19	18276129	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
19	18276166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	19111481	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	19598513	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.25
1	19600701	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.181818
1	19601364	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.153846
13	19714741	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.25
3	19952093	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.196078
1	20647924	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.181818
1	20755311	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.347826
1	20755323	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20755324	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	20755333	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	20755347	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	20755465	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	20755466	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	20755488	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	20755489	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	20755492	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	20755544	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.125
1	20755561	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	20755569	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.6
1	20756758	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.5625
1	20756783	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.125
1	20756784	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.125
1	20756827	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20756844	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	20756847	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.571429
1	20756912	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.75
1	20756913	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.153846
16	21518154	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0454545
10	21968608	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.333333
10	21968649	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.727273
14	22908509	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.2
14	22916154	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.642857
14	22916164	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.133333
14	22916354	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.238095
14	22916377	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.238095
14	22916408	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.444444
8	23062493	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.4
7	23520966	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.133333
3	23848349	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.461538
3	23848350	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.307692
4	24531468	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.2
22	24573003	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.242424
22	24573004	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0625
22	24573021	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.5
22	24573053	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.157895
22	24573054	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.235294
22	24573057	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.25
22	24573093	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.108108
22	24573096	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.184211
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.118644
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.454545
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.159574
22	24573192	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0208333
22	24573617	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0238095
22	24573655	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.138462
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.15
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.28125
22	24573702	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0833333
22	24573722	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0350877
22	24573723	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0338983
22	24573725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.03125
22	24573726	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.046875
22	24573734	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0634921
22	24573737	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0327869
22	24573787	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0487805
22	24573796	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0769231
22	24573814	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.472222
22	24573832	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.116279
22	24573833	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0638298
22	24573838	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0392157
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.410714
22	24574608	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.142857
22	24574615	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.12
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.941176
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.235294
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.533333
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.375
22	24574678	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.307692
22	24574703	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.190476
22	24574707	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.2
22	24574708	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0952381
22	24574742	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.444444
22	24574751	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0714286
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.477273
22	24574764	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0416667
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.114286
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.028169
6	24710363	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.148148
4	25279889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
18	26169183	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.2
18	26169195	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.466667
18	26169219	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.222222
18	26169240	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.35
18	26169249	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.125
18	26169263	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.105263
18	26169683	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.2
10	26773027	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26773377	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.3
10	26773378	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.3
10	27125818	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.153846
10	27125821	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.2
17	27298045	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.333333
17	27298046	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.25
17	27302147	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.214286
17	27302153	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.2
1	27878003	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.133333
1	27878007	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.285714
1	27878030	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.266667
1	27880448	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27880460	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.111111
1	27880598	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	27880607	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.357143
1	27881401	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	27881433	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0571429
1	27881434	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0588235
10	28525686	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.466667
10	28525689	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.133333
10	28525690	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.133333
10	28525726	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.705882
10	28525729	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.3125
10	28525735	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.117647
10	28525763	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.714286
10	28538357	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.230769
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.227273
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0909091
10	28538474	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0952381
10	28538497	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.142857
10	28538532	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.111111
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.136364
10	28538708	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.263158
10	28538711	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.105263
10	28539639	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0689655
10	28539659	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0967742
10	28539684	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0869565
10	28539685	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.136364
10	28545312	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.153846
17	28722353	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.2
2	28763948	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	28763953	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	28764870	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28784814	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28786170	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28786188	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.178571
2	28786214	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28786217	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.08
2	28786584	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0689655
2	28788932	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.103448
2	28788938	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0645161
2	28792466	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0666667
2	28792467	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0483871
16	28831469	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.142857
1	29174900	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.181818
22	29199040	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
22	29287369	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.153846
17	29755773	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
6	30492025	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0223881
6	30492063	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0546448
6	30492075	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.021164
14	31019995	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.117647
16	31121254	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0851064
16	31121852	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.153846
16	31121855	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0714286
16	31121881	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.137931
16	31122003	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.3
16	31122013	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.125
16	31122694	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31122702	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31122760	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.666667
16	31122801	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31122802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31123240	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.307692
16	31123272	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31123286	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.625
16	31123310	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.277778
16	31123343	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31123356	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.5
16	31123362	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.166667
16	31123382	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.538462
16	31123383	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.384615
16	31123391	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.142857
16	31123406	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.363636
16	31123469	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31123470	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31123471	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.7
16	31123483	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.166667
16	31123526	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.105263
16	31123530	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.473684
16	31123560	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31123641	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.3125
16	31123646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.266667
16	31358557	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.128205
16	31364161	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.117647
16	31456246	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
18	32121410	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.3
5	32165093	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.166667
2	32507253	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.142857
2	32507254	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32520756	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.545455
15	32579820	A->G	+	ENSG00000261064	LINC02256	lincRNA	Intergenic	.	.	Alu	0.333333
7	32758682	A->G	+	ENSG00000229358	DPY19L1P1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
7	32758721	A->G	+	ENSG00000229358	DPY19L1P1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0952381
9	33027729	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0869565
9	33027730	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.12
9	33027756	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.125
9	33027771	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0714286
9	33027881	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	33037472	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0666667
9	33037632	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	33038108	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0487805
9	33076984	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
6	33260329	A->G	-	ENSG00000223501	VPS52	protein_coding	Intergenic	.	.	Alu	0.454545
11	33265653	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33268035	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	33268091	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	33268117	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.357143
11	33268136	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.157895
11	33268160	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	33268464	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	33268500	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	33268516	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1
21	33404873	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0327869
21	33405012	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.108108
21	33405973	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.155172
21	33405986	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0338983
21	33406282	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.166667
17	35076154	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.272727
17	35076167	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35076170	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35076437	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35076464	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.384615
17	35076513	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.5
17	35076639	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.166667
22	35266923	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.2
20	35728014	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.166667
20	35728059	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0909091
19	35770266	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.7
19	35770299	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.2
19	35770306	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.7
19	35770312	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.181818
7	35888752	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
1	36476745	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0869565
1	36476763	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0869565
1	36476916	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.214286
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.285714
1	36476961	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.117647
6	36541894	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.25
6	36541925	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.142857
6	36541926	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.227273
6	36541944	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0952381
6	36541957	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.214286
6	36541960	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.133333
6	36541993	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.357143
6	36542061	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.4
6	36542086	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.25
6	36542108	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.2
17	36548823	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.214286
20	36913851	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36914592	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.545455
21	37410928	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.105263
21	37427130	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.428571
21	37427131	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.214286
21	37427386	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0952381
21	37427398	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.117647
8	37864970	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.2
9	37885590	A->G	-	ENSG00000122696	SLC25A51	protein_coding	Intergenic	.	.	Alu	0.166667
8	37888567	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0540541
8	37889064	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	37892611	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.162791
8	37893142	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.05
8	37893147	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0789474
8	37893171	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.129032
8	37893172	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.266667
8	37893212	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.521739
8	37893234	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0555556
8	37893269	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.075
8	37893278	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.1
8	37893347	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0943396
8	37893668	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.457143
8	37893728	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.424242
8	37893733	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.116667
8	37893738	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.418605
8	37895361	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0229885
6	37971803	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.3
8	38140460	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.363636
8	38140596	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.545455
8	38140612	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.2
19	38844997	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.176471
2	39054208	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39115646	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.4
2	39115664	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
14	39178439	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.16
14	39178807	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.153846
3	39409942	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	40377024	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0526316
1	40377052	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	40377053	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	40377104	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.157895
1	40377214	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.125
4	40617374	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.272727
13	40949614	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0754717
22	40955334	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.111111
13	40997369	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.272727
13	40997625	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.08
13	41011681	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.114943
13	41011690	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.038961
13	41011694	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0447761
13	41011716	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.05
13	41012605	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0447761
13	41012623	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0441176
13	41012664	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0384615
13	41012757	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0434783
20	41041300	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.166667
20	41041323	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41042050	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.12
20	41042090	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.157895
20	41042145	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	41052003	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.125
13	41057249	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.230769
13	41057499	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	41057645	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0606061
17	42007750	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.4
3	42015910	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.363636
3	42018866	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.272727
3	42018869	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.3
3	42018877	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.4
3	42022642	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.181818
8	42534071	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.153846
8	42534082	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.272727
6	42940301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0882353
6	42940304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	42941455	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0597015
6	42941842	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.363636
6	42941899	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.352941
6	42941906	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.2
6	42941916	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.6
6	42942079	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.277778
6	42942300	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.333333
6	42942320	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.105263
6	42942346	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.125
6	42942350	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.185185
6	42942373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.481481
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.727273
6	42942481	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.764706
6	42943140	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.15625
6	42943148	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.5
6	42943158	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.114286
6	42943165	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0731707
6	42943175	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0487805
6	42943183	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.12766
6	42943193	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.119048
6	42943213	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.138889
6	42943221	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0444444
6	42943239	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.037037
6	42943240	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42943241	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0384615
6	42943351	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.128205
6	43029649	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.111111
6	43029674	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.583333
6	43029679	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.5
6	43029700	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.454545
6	43029755	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.7
6	43029800	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.4
6	43029809	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.6
6	43029855	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.384615
6	43029872	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.166667
6	43029882	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.210526
10	43141101	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.1875
10	43141123	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.117647
10	43141124	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.3125
10	43141130	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.125
10	43141467	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.153846
10	43141477	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.178571
10	43141489	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.0625
10	43438438	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.173913
6	43616442	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.307692
6	43616469	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.153846
1	43676232	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.363636
15	43749821	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.333333
11	43857059	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.2
5	44815644	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.133333
5	44815669	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.266667
5	44815675	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.111111
5	44816347	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.117647
7	44832684	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0526316
7	44832686	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0283019
7	44832692	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.03125
7	44832701	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.394495
7	44832704	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.172727
7	44832731	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0505051
7	44832775	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0555556
7	44832777	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0714286
7	44832810	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.125
7	44832820	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.208333
7	44832822	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.222222
7	44832828	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.206897
7	44832838	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0666667
7	44832855	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.205882
7	44832864	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0444444
7	44832867	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0444444
7	44832874	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.456522
7	44832881	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.352941
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.132075
7	44832893	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0754717
7	44832903	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0545455
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.363636
7	44832917	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.08
7	44833090	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0714286
7	44833102	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0582524
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44833133	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0909091
7	44833140	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0684932
7	44833223	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0357143
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.253012
7	44833263	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0833333
7	44833280	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0277778
7	44833300	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.54
7	44833305	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.176471
7	44833329	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.131579
7	44833330	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.282051
7	44833371	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.757576
7	44833397	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.5
7	44833401	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0588235
7	44833402	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0588235
7	44833404	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.205882
7	44833453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.27907
7	44833460	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.170213
7	44833464	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0363636
7	44833499	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0645161
7	44833502	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0298507
7	44833507	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.546875
7	44833508	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0923077
7	44833516	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0517241
7	44833617	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.031746
7	44833623	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.128571
7	44838478	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.3
X	44883254	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.25
X	44883260	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.333333
X	44883280	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.133333
X	44883609	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.153846
19	45006305	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.157895
19	45006334	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45006876	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45012534	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45012582	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.176471
19	45012682	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45013350	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.230769
19	45013361	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.25
19	45013375	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45013578	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
17	45217147	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.272727
17	45467226	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	1
1	45653316	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.333333
1	45656889	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.153846
1	45683354	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
21	46321274	A->G	-	ENSG00000160298	C21orf58	protein_coding	Intergenic	.	.	Alu	0.133333
11	47368253	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.571429
11	47368256	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480215	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47480359	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47480360	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.333333
17	47488813	A->G	-	ENSG00000228782	MRPL45P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
20	47510732	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.5
20	47510845	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.25
11	47538054	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47542569	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47542656	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47765942	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.157895
2	47896476	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
19	48328907	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0882353
19	48328940	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0540541
19	48328957	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.111111
19	48329042	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.116279
X	48580629	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.384615
X	48580668	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.117647
17	48867597	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	48936500	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.166667
3	48936505	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.3
3	48936547	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
13	48991559	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.214286
15	49034889	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.2
3	49368936	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.5
18	49389787	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.666667
3	49407047	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.25
3	49407336	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.166667
13	50039258	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.181818
13	50047609	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.157895
3	50099148	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
15	50099418	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.193548
14	50115249	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.142857
14	50193314	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.181818
5	50413652	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.272727
5	50413659	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.25
22	50539964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0552147
22	50540019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0858896
17	51027214	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51027229	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51027349	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
19	52193703	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.5
3	52415245	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.8
3	52415252	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.285714
3	52415277	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.25
3	52415296	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.166667
3	52415297	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.428571
3	52415314	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.125
13	52630414	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.545455
8	52706855	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.105263
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.55
8	52706889	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.157895
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.263158
3	53253400	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.181818
3	53253405	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.111111
3	53864280	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.125
19	53871124	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.171429
19	53872600	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.0930233
19	53872610	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.186047
19	53872624	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.0731707
19	53873114	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.0348837
2	53965402	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.230769
2	53965425	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.4
2	53965433	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.230769
2	53965489	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.105263
2	53965497	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.272727
8	54081585	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.2
19	54097512	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.277778
19	54097557	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.176471
19	54097565	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.1875
19	54097652	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.263158
19	54097659	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.210526
19	54097686	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.263158
19	54097718	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.214286
19	54097800	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.181818
19	54098308	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.111111
19	54098335	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.210526
19	54098597	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.176471
19	54202945	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.04
19	54202950	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.037037
19	54203577	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0909091
19	54203613	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0434783
19	54203648	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0697674
19	54204125	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.1
19	54216264	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.128571
19	54216266	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.046875
19	54237241	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.166667
19	54237247	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.5
19	54238053	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.195122
19	54238063	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.236364
19	54238073	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0465116
19	54238146	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0869565
19	54238153	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.214286
19	54238162	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.310345
19	54238175	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.2
19	54238202	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.129032
19	54238212	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.08
19	54238218	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.25
19	54238232	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0833333
19	54238238	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.69697
19	54238257	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0714286
X	54562102	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
X	54562120	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54562126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	54562226	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
X	54562243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54562252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
X	54562255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
X	54562281	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	54562289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
X	54562307	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
X	54562308	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
X	54562329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.261905
X	54562666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.159091
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.228571
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.434783
X	54562748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16
X	54563506	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.233333
X	54563522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54563528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.193548
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.548387
X	54563555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54563564	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
X	54563574	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54563600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54563627	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54563633	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
X	54563634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54563647	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
X	54563692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121951
X	54563711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.241935
X	54563731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
X	54564507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54564508	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	54564537	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54564582	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
X	54564588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
X	54564617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54564658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
X	54564814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
X	54564820	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54564833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54564834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
X	54564838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54564873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54564971	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
X	54564972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
X	54564978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
X	54565009	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54565015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54565019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	54565573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54566807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54566813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54566886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
19	54891602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
14	55059383	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.166667
14	55275703	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0714286
14	55275770	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0689655
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.387097
14	55278752	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55278804	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0588235
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.16
14	55278828	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55278859	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55278901	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55279055	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.545455
14	55279127	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0714286
14	55279140	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.148148
14	55279148	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0689655
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.421053
14	55279167	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.4
14	55279206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.5
14	55279207	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55281120	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55281133	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.571429
14	55281219	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.333333
14	55285136	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1
14	55290272	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
12	55787569	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.3
8	55890004	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0810811
8	55890005	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0833333
8	55890019	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0789474
8	55890063	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0606061
8	55890802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.291667
8	55890840	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.28
8	55890857	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.173913
8	55890867	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.315789
8	55891200	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0588235
8	55891231	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55891232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.514286
8	55891258	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55891272	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0540541
8	55891273	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0571429
8	55891343	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0967742
8	55895557	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0789474
8	55895561	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.1
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55896190	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55896211	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55896258	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0689655
8	55896818	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55896881	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55906512	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55906537	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.222222
8	55906540	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55906691	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55906694	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55906695	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55916927	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55917098	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.5
8	55917279	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55917311	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.227273
8	55917325	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55917333	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.428571
8	55917347	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55917357	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.173913
8	55917384	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.466667
8	55922682	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.727273
8	55922687	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55922717	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	56003514	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
7	56098029	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
12	56730446	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.3
12	56730629	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.176471
12	56730641	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.266667
12	56730642	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.133333
12	56730651	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.833333
12	56731292	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.210526
12	56731351	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.473684
12	56731355	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.4
12	56731396	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.25
12	56731397	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.1875
12	56731435	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.125
12	56731460	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.285714
12	56731462	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.5
12	56731463	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.384615
12	56731486	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.142857
5	57183851	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.307692
3	57591666	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.166667
17	58274563	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.2
17	58340547	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
15	58926717	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
17	59203244	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.114286
17	59203264	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.153846
17	59203268	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.0869565
17	59203410	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.2
17	59203459	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.222222
17	59204907	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.0740741
15	59676461	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.111111
15	59676462	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.117647
15	59687623	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0338983
8	60586699	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.176471
2	60904703	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.25
2	60909780	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.166667
5	61378916	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.714286
5	61378925	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.142857
5	61378938	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.272727
5	61378952	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.181818
2	61528126	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.363636
2	61528162	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.1875
2	61528171	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.214286
14	61743152	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0789474
14	61743171	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0555556
14	61743172	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0540541
14	61743177	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0555556
14	61743254	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.384615
14	61743333	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.153846
14	61743345	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.2
2	61882070	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.2
2	61882071	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.2
12	62333544	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.272727
1	62449049	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	62449064	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.2
1	62449654	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.266667
1	62449661	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	62449702	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.1875
1	62449726	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.222222
1	62449765	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.411765
17	62476461	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.153846
17	62476483	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62476531	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.6
17	62476822	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.125
17	62476837	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.307692
17	62589887	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.545455
17	62590664	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.142857
17	62590731	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.285714
17	62591145	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.538462
17	62591151	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.25
11	62738944	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.363636
11	62823347	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62840792	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.2
11	62840847	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.130435
11	62841013	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.483871
11	62841151	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.0416667
10	63249748	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	63250244	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
15	63536733	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.214286
15	63545701	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.384615
15	63545714	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1875
15	63545762	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0689655
15	63545850	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.2
15	63546807	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.409091
15	63546869	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0392157
15	63546870	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.06
15	63546882	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.111111
15	63547458	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.241379
15	63547474	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	63547475	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0869565
15	63547491	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.185185
15	63547538	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0740741
15	63547548	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.214286
15	63547655	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.08
15	63547963	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0666667
15	63547979	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.103448
15	63547997	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0645161
15	63548000	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.16129
15	63548026	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.115385
15	63548031	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.9
15	63548229	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.193548
15	63548230	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.375
15	63548234	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.21875
15	63548247	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0666667
15	63548283	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.129032
15	63548419	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.380952
15	63548465	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.16
15	63548590	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.047619
15	63548811	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63548833	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.12
20	63900521	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.166667
2	64139404	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.210526
15	64361405	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.157895
15	64361433	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	64361447	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.375
15	64361463	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.375
15	64361479	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.230769
12	64463312	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.1875
12	64463363	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.2
17	64472305	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
11	64858462	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.230769
11	64858483	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	65127475	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.5
2	65127604	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.15
2	65127626	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.15
2	65127643	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.227273
2	65127872	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.333333
15	65708234	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
8	65729792	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.3
15	65736397	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65746472	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.6
15	65746531	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65746538	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.5
15	65746547	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65746551	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3
15	65747011	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65747037	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.230769
11	65772932	A->G	-	.	.	.	Intergenic	.	.	Alu	0.777778
11	65772933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.823529
11	65772989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.358974
11	65774442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0797546
11	65774466	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0422535
11	65774508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.192
11	65774523	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0495868
11	65774544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0306122
11	65774549	A->G	-	.	.	.	Intergenic	.	.	Alu	0.114286
11	65774574	A->G	-	.	.	.	Intergenic	.	.	Alu	0.03
11	65774587	A->G	-	.	.	.	Intergenic	.	.	Alu	0.021978
11	65774681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.127389
11	65774682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0636943
11	65774688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0333333
11	65774690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0723684
15	65774937	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
7	65981118	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.0714286
7	66155247	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.166667
12	66193998	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0449438
12	66194002	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.147368
12	66194007	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.129032
12	66194056	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	66194058	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0483871
12	66194127	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0925926
12	66194750	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	66202516	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.103448
12	66202517	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0909091
12	66202694	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.133333
12	66202707	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	66202776	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	66629984	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66635424	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.363636
11	66635425	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.363636
11	66635436	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3
11	66635494	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66635643	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3125
11	66635644	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.235294
11	66635650	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.294118
11	66635750	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66649517	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.25
7	66681531	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.272727
7	66741883	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.526316
7	66741948	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66742630	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
7	66742707	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0833333
7	66742741	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66742791	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1
7	66742881	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0909091
7	66743146	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3
7	66743196	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.214286
7	66743200	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.428571
7	66743386	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66743454	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
1	66936297	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.333333
1	66936303	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
1	66936501	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.4
1	66936507	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.166667
1	66936789	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.133333
1	66936813	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.315789
1	66936872	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.3
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.454545
1	66937505	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.1
1	66937535	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	67353404	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.583333
17	67353432	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.538462
17	67354862	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.333333
17	67354868	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.333333
17	67354873	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.166667
10	67890845	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
2	68202497	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	68202563	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.117647
2	68245179	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.230769
12	68623751	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0952381
12	68637401	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68637454	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68637466	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.214286
12	68637476	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
10	68975683	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.3
10	68975926	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.142857
11	69091221	A->G	+	ENSG00000162341	TPCN2	protein_coding	Intergenic	.	.	Alu	0.153846
10	69095169	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0566038
10	69095214	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0714286
16	69571253	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0769231
2	69928685	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.133333
2	69928785	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.192308
2	69928790	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	70924066	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.136364
14	70924098	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.125
12	71658421	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.1
12	71658426	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
12	71658468	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.157895
12	71658508	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.3
12	71661555	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.133333
12	71661567	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.133333
12	71661620	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.111111
12	71661646	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0606061
12	71661653	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0882353
12	71661685	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.105263
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.380952
12	71775797	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.142857
12	71775803	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.1875
3	71776450	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0697674
3	71776493	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0535714
13	71840014	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.153846
13	71840052	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.25
13	71840084	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.153846
13	71840091	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.166667
3	72416072	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.09375
3	72416091	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.166667
3	72416166	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.25
3	72416418	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.1
3	72416442	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.125
3	72416692	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.142857
3	72416701	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.108108
3	72416710	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.09375
15	72522394	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.25
15	72779446	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.3
7	72981969	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	72981981	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	72981982	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
14	73137921	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.272727
9	73154539	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0320513
9	73154677	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0750853
9	73157385	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0324324
9	73157454	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0392157
9	73157463	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0638298
9	73157489	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0337079
9	73157494	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0215054
9	73157534	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.130435
7	73461839	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.454545
6	73513847	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
6	73513848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
6	73513849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
6	73513909	A->G	-	.	.	.	Intergenic	.	.	Alu	0.368421
6	73513943	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
6	73513970	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
6	73513976	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
6	73513980	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
6	73514135	A->G	-	.	.	.	Intergenic	.	.	Alu	0.411765
6	73514497	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
6	73514594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.296296
6	73514822	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0444444
6	73514842	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
6	73514880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.128205
10	73776315	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.25
10	73776895	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.777778
10	73776941	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.45
10	73776962	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.217391
10	73777598	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.153846
10	73777632	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.388889
10	73777649	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.117647
10	73777654	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.176471
10	73777939	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.222222
10	73777964	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.2
10	73778138	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.6
8	73873534	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.2
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.307692
2	74185380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
15	74796165	A->G	+	ENSG00000103653	CSK	protein_coding	Intergenic	.	.	Alu	0.115385
15	74797042	A->G	+	ENSG00000103653	CSK	protein_coding	Intergenic	.	.	Alu	0.142857
17	75104591	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0714286
17	75107072	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
16	75598761	A->G	-	ENSG00000065457	ADAT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	75651610	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.3
10	75692091	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.142857
4	75916908	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.0357143
4	75916917	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.146341
4	75916918	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.146341
9	76461795	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.0769231
18	76808321	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.347826
18	76808383	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.111111
18	76809170	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.0833333
18	76809286	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.130435
18	76809456	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.190476
17	78757059	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78757072	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
4	78867121	A->G	+	ENSG00000138756	BMP2K	protein_coding	Intergenic	.	.	Alu	0.4
15	78875693	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.2
15	78888232	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.117647
15	78888310	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0851064
15	78888316	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0444444
15	78898235	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	78898243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.458333
15	78898244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
15	78898313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	78898315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
15	78898339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
15	78898378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
15	78898379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
15	78898419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
15	78898431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
15	78898489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
15	78899058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.031746
15	78899236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
15	78899260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.405405
15	78899285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
15	78899297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
15	78899321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
15	78899322	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
15	78899331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.27027
15	78899337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
15	78899362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
15	78899416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
15	78899417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
15	78899431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
15	78899500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
15	78899549	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
12	79926040	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.133333
9	85544533	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
4	87210034	A->G	-	ENSG00000145332	KLHL8	protein_coding	Intergenic	.	.	Alu	0.181818
6	87514055	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
10	87891659	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.166667
10	87891739	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0909091
15	89094967	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.166667
1	89642647	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.388889
1	89643293	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.1
9	91292551	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.47619
9	91292552	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.142857
9	91294315	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.615385
14	91503187	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.133333
15	92889277	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	92889281	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.411765
15	92889355	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	92889365	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.172414
15	92889408	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.190476
15	92889426	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	92890756	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0892857
15	92890757	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0265487
15	92890816	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0322581
15	92891304	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.05
15	92891338	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0545455
15	92893938	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0625
15	92894069	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.25
15	92894748	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.388889
15	92908850	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.115385
1	93155737	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.230769
9	93473445	A->G	+	ENSG00000048828	FAM120A	protein_coding	Intergenic	.	.	Alu	0.1
9	93473447	A->G	+	ENSG00000048828	FAM120A	protein_coding	Intergenic	.	.	Alu	0.133333
2	96263285	A->G	-	ENSG00000135956	TMEM127	protein_coding	Intergenic	.	.	Alu	0.176471
10	97375860	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.125
10	97375878	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.130435
10	97375912	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.121212
10	97375921	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.214286
10	97375931	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.208333
10	97375956	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.125
10	97375982	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.103448
10	97376027	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.147059
10	97376277	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.181818
10	97376300	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.111111
10	97376307	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.263158
10	97376352	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.44
10	97376353	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.36
10	97376379	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.210526
10	97376455	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.122807
10	97376485	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.115385
10	97376486	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.134615
10	97376507	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0833333
10	97377111	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.384615
10	97386366	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.08
10	97386417	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.15
10	97387426	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.117647
10	97387431	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.266667
8	97729031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.259259
8	97729059	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
8	97729154	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
8	97729162	A->G	+	.	.	.	Intergenic	.	.	Alu	0.159091
8	97729188	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137255
8	97729189	A->G	+	.	.	.	Intergenic	.	.	Alu	0.431373
8	97729201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.196429
8	97729686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
8	97729726	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0517241
8	97729727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0517241
8	97729744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.354167
8	97729765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.183673
7	97971501	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.434783
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.521739
2	98447932	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.181818
12	98596782	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.214286
12	98596859	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.181818
12	98596898	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.2
6	99405689	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.384615
7	99490080	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.125
7	99497385	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.6
12	100035682	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.181818
8	100716315	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0847458
8	100716318	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.125
7	101086446	A->G	+	ENSG00000169871	TRIM56	protein_coding	Intergenic	.	.	Alu	0.105263
2	101274883	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0857143
2	101274898	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.27907
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.222222
2	101274925	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.16129
2	101275013	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.116279
2	101275053	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.117647
2	101275059	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.09375
2	101275062	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.125
2	101275066	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.25
2	101275076	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0689655
2	101275090	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.153846
2	101275229	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1
2	101275256	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.166667
10	101789412	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.3
12	101827854	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.166667
12	101827881	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101827915	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.166667
12	101901703	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.142857
12	101901759	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
4	102558720	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.16
4	102559818	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.294118
4	102559832	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.176471
4	102814582	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.0645161
10	103170800	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103177600	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	103178303	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	103178304	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103178322	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.266667
10	103178379	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	103178436	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.148148
10	103178437	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0714286
10	103178445	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103178462	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0769231
10	103178522	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.08
10	103178588	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.272727
10	103178598	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.6
10	103178607	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103179162	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103179220	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.105263
10	103179226	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.277778
10	103179589	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0967742
10	103179592	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.258065
10	103180475	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
12	103936432	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.242424
12	103936500	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.08
12	103936526	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.0769231
12	103936540	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.212121
12	104460457	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0833333
12	104686106	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
9	104896994	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.142857
7	104945840	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.134615
7	104946021	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.2
7	105023282	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.222222
7	105023334	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.214286
7	105023577	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1
7	105023611	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
7	105032005	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.153846
7	105032188	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.272727
7	105032189	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105032323	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105032341	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.176471
9	105711705	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.2
9	105711735	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.3
1	109063527	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.166667
1	109063534	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.428571
1	109063610	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0697674
1	109063614	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0465116
1	109063617	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.047619
1	109063618	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0952381
1	109063621	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.05
1	109063714	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.125
1	109063715	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.121212
1	109063723	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0689655
9	110245964	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.133333
9	110245965	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.133333
9	110246029	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.307692
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.3
12	110498057	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.5
12	110498072	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.2
12	110498109	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.142857
12	110498110	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.214286
12	110498175	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.181818
12	110498247	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.2
12	110498261	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.25
13	110895337	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.142857
13	110895365	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.117647
6	110896874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
13	110897198	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.027027
13	110897279	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0909091
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.190476
6	110897569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110897570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110897573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110897659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0322581
13	110898675	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0294118
13	110898687	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.030303
13	110898697	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0363636
13	110899024	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.272727
13	110899029	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
13	110899955	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0740741
13	110899967	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0377358
13	110899994	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.325843
13	110899995	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0224719
13	110900009	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.170732
13	110900040	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.347222
13	110900042	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.047619
13	110900044	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.047619
10	110924812	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.230769
10	110924911	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.1
10	110924912	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.2
10	110924920	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0689655
10	110924924	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0833333
10	110924951	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	110924977	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.272727
6	110968174	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
12	111427131	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.157895
12	111427152	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.1
12	111427153	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.1
7	112343658	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.173913
9	112473860	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.357143
9	112475051	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.214286
9	112475216	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.333333
9	112475217	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.916667
9	112475224	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.666667
1	112623431	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.117647
1	112623466	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	112623544	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	112655243	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	112663631	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112663705	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112663970	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.363636
1	112664023	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.4
9	113293510	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	113293518	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	113293540	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	113709950	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.111111
2	113709956	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.263158
2	113709980	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.133333
3	113730189	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.230769
3	113754480	A->G	+	ENSG00000114573	ATP6V1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	113755533	A->G	+	ENSG00000114573	ATP6V1A	protein_coding	Intergenic	.	.	Alu	0.272727
1	114573459	A->G	-	ENSG00000116752	BCAS2	protein_coding	Intergenic	.	.	Alu	0.0833333
11	116922582	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	116922583	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	116922584	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117063838	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	117065911	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117070878	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117070890	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117071679	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117071892	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	117085169	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0666667
11	117085183	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	117085185	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.151515
11	117085264	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.285714
12	118356421	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.307692
12	118356422	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.230769
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.333333
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.25
12	118356707	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118356798	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.583333
12	118356800	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.333333
12	118356840	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.173913
12	118356900	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.266667
12	120555889	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.166667
12	122507296	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.214286
12	122512078	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.416667
12	122513946	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.139535
12	122869883	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.2
12	122890486	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.153846
9	122901785	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.142857
9	122901792	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.181818
8	123032942	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.5
12	123409861	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
12	123422590	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.214286
12	123422608	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.214286
12	123434296	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	123434302	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.272727
12	123434366	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.117647
12	123434379	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.142857
12	123434382	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.272727
12	123434384	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.2
10	124923339	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.4
9	125187448	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.133333
11	126347061	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.4
11	126347066	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.333333
11	126347079	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.272727
2	127334584	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127334882	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.363636
9	127790866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
9	127790891	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
9	127790892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
9	127790896	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
9	127790909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
9	127790946	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127791000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	127791029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0882353
9	127791038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.102564
9	127791443	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
9	127791444	A->G	+	.	.	.	Intergenic	.	.	Alu	0.228571
9	127791461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
9	127791483	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
9	127791624	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
9	127791842	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0512821
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
9	127791856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.28
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.195652
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
9	127791902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127792313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.155556
9	127792406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0638298
9	127793099	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	127793151	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
9	127793152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
9	127793177	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
9	127793178	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16
9	127793179	A->G	+	.	.	.	Intergenic	.	.	Alu	0.26087
9	127793191	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
9	127793999	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127794000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
9	127794004	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
9	127794017	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127794039	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
9	127795482	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.176471
9	127806385	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.3
9	127806438	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.153846
10	128053124	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.152542
3	128740694	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128740816	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.363636
3	128744168	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.538462
9	129954805	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129954831	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.416667
9	129955263	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.375
9	129955350	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129955621	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.357143
8	130001625	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	130001640	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	130001667	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.4
8	130001746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.111111
8	130001747	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.08
8	130001753	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0769231
9	130705010	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
9	130705018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130705038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	130705064	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130705073	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
9	130705115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
9	130705306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130705756	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130706107	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130706148	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
9	130706158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
9	130706801	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
9	130706802	A->G	+	.	.	.	Intergenic	.	.	Alu	0.26087
9	130706811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130706820	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	130706880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
3	130871825	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.25
7	130957856	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.0540541
7	130957978	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.142857
2	131091873	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.0769231
2	131129605	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131159990	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.125
10	131903233	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.153846
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.444444
10	131903313	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.277778
10	131903373	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.166667
12	133040380	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.272727
10	133294700	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.388889
10	133294732	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.3125
8	133562348	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.666667
5	134379590	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.3
5	134379591	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134380015	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134380016	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
9	134905519	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0285714
9	134905551	A->G	-	.	.	.	Intergenic	.	.	Alu	0.129032
9	134905569	A->G	-	.	.	.	Intergenic	.	.	Alu	0.141667
9	134905580	A->G	-	.	.	.	Intergenic	.	.	Alu	0.03125
9	134905604	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0510204
9	134905624	A->G	-	.	.	.	Intergenic	.	.	Alu	0.138889
9	134905679	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0961538
9	134905680	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
9	134905713	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
6	135204901	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.181818
3	136332041	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.230769
6	136786272	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0945946
6	136786300	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.19697
6	136786304	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.078125
6	136786320	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.125
6	136786335	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0322581
6	136786339	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.030303
X	136877559	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.2
5	138363978	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.272727
5	138524458	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	139046043	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.025
4	139047243	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0793651
4	139047244	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.136364
4	139047249	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0757576
4	139047299	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0606061
4	139047312	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.157895
4	139047313	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.473684
4	139047323	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
4	139047339	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.1
4	139047343	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0689655
4	139047352	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.172414
4	139047378	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.178571
4	139047379	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	139047388	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.35
4	139047402	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.26087
4	139047420	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139047489	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0394737
7	139076673	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139080522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0731707
7	139080554	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0512821
4	139170467	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139368663	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139370481	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0666667
7	139378383	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139396426	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.142857
7	139418854	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.09375
7	139418860	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0857143
7	139418898	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.047619
7	139418908	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0869565
7	140897659	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.25
6	144165375	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.3
8	144292777	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.190476
8	144292782	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.105263
8	144292847	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.206897
8	144292908	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.0857143
1	145928122	A->G	+	ENSG00000280778	AC243547.3	protein_coding	Intergenic	.	.	Alu	0.133333
6	149334630	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.142857
6	149350200	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.2
1	150340778	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.125
5	150405957	A->G	-	ENSG00000019582	CD74	protein_coding	Intergenic	.	.	Alu	0.0357143
1	150570331	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0333333
1	150570388	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0357143
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0714286
1	150571314	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0795455
1	150571325	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0714286
1	150612087	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.025
1	150612617	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.266667
1	150612623	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.180124
1	150612650	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.117647
1	150612688	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.130435
1	150613023	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0333333
1	150613024	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.05
1	150613029	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.103448
1	150613030	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.157895
1	150613093	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0638298
1	150613114	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.190476
1	150613131	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0952381
1	150613132	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.1
1	150613133	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0588235
1	150613174	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0434783
1	150613256	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0645161
1	150620839	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.214286
1	150993382	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.545455
1	150993477	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.142857
1	150993488	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.307692
4	151105793	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
5	151271819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15873
5	151271828	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0757576
5	151271889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.097561
5	151271914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
5	151271929	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
5	151271955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
5	151271956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
5	151271961	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
5	151271965	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
5	151271988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
5	151271996	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
2	151420461	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	151420465	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.545455
3	152275449	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0322581
3	152329542	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0425532
7	152427081	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
1	155558933	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.153846
1	155681529	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	155684706	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155684714	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.214286
1	155684724	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155684820	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	156142023	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
7	157372998	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0405405
7	157373926	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.08
4	158780157	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.2
7	158789417	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0425532
7	158789454	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0645161
7	158789613	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158789614	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158799603	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.125
7	158799873	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
2	159732784	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.125
6	159734199	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.08
6	159734203	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.153846
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.48
6	159734248	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0666667
6	159734602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.170732
6	159734627	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	159734640	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.125
6	159735628	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.8
1	167639756	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intergenic	.	.	Alu	0.272727
3	169987339	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.307692
3	169987374	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.125
1	171492869	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.230769
3	172053692	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.238095
1	173859719	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	173859897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
2	173931548	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.181818
2	173931621	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.285714
2	173932329	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.176471
2	173932472	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.170732
2	173932482	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.116279
2	173946800	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.142857
1	174003166	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.166667
2	178434492	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.416667
2	178434564	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.142857
2	178435110	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.2
2	178435137	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.166667
2	178435156	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.545455
2	178435304	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.3
2	178435308	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.636364
2	178438758	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.3
2	178438759	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.4
5	179829840	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	179829987	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	180033106	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
3	180921221	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.363636
3	180921229	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.3
5	181240894	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.142857
3	182830189	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.153846
3	182830236	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.111111
3	182906950	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.4
4	184781112	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.208333
4	184781676	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.118812
4	184781677	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.270833
4	184781705	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0229885
4	184781706	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0561798
4	184781747	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.15873
4	184781748	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.206349
4	184781777	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.135135
4	184781778	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0540541
4	184781806	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	184781807	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	184781830	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.105263
4	184799389	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.194444
4	184799390	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.135135
2	190886684	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.181818
2	190886687	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.307692
3	195527232	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.384615
3	195527257	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.2
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.230769
2	196162715	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0285714
2	196162782	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0298507
2	197286403	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.117647
2	197286577	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.2
2	197491909	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.255319
2	197492070	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.12987
2	197492071	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.168831
2	197492074	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.325
3	197612712	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4375
3	197612762	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.933333
3	197612763	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
3	197612777	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.263158
3	197612785	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.294118
3	197612787	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.866667
3	197613017	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.461538
2	200855397	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.105263
2	200855752	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0625
1	202769557	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.4
2	203298459	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203298478	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203298858	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203298863	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203298924	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203298941	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203300769	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203303214	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.454545
2	203303233	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.294118
2	203303234	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.176471
2	203303279	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.608696
2	203303285	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.28
2	203303321	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.8
2	203303330	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.314286
2	203303440	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.75
2	203303441	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203303486	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.454545
2	203303509	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203303755	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.538462
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.642857
2	203303761	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.176471
2	203303852	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203303956	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203303964	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203303965	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203304241	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203304259	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	1
2	203304262	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203304275	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.5
2	203304444	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203304458	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.727273
2	203304459	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.454545
2	203304471	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203304681	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1875
2	203304861	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203305376	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203305382	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203305391	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203305399	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.454545
2	203305438	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.416667
2	203305447	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	224509282	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.15
1	225787015	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.214286
1	225787044	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.272727
1	225787046	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.384615
1	226000593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
1	226000698	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	226001375	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	226001408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
2	227499560	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.2
2	227499561	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.2
2	227539610	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.176471
2	227539612	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.533333
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.2
2	227539915	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.363636
2	233159489	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.454545
2	233362449	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.166667
2	233362531	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.1
2	233362580	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.117647
1	235323166	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235826738	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.527273
1	235826820	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.5
1	235826846	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0952381
1	235826849	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.108696
1	235826852	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.08
1	235826871	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.152174
1	235826876	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0434783
1	235826896	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0862069
1	235826899	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0892857
1	235826915	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.157143
1	235826956	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.360656
1	235826959	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.196721
1	235826962	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.134615
1	235826964	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.34
1	235827113	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.12963
1	235827159	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.175
1	235827161	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.6
1	235827172	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0909091
1	235827192	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.193548
1	235827195	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.344828
1	235827245	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.482759
1	235827247	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.3
1	235827269	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.27907
1	235827286	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0555556
2	237707312	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.535714
2	237707326	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.222222
2	237707339	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.575
2	237707358	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.34
2	237707437	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0517241
19	1458476	A->G	-	ENSG00000115266	APC2	protein_coding	Intron	.	.	Alu	0.181818
16	3128920	A->G	-	ENSG00000263072	ZNF213-AS1	antisense	Intron	.	.	Alu	0.142857
12	3611137	A->G	-	ENSG00000280202	AC005831.1	TEC	Intron	.	.	Alu	0.166667
19	8374592	A->G	-	ENSG00000269386	RAB11B-AS1	antisense	Intron	.	.	Alu	0.142857
2	9936699	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.294118
2	9936711	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.176471
19	11449896	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0322581
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.526316
19	11449925	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0833333
19	11449931	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0714286
19	11449945	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.166667
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.508475
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.372881
19	11449962	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.1
19	12003412	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.25
3	14944573	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0208333
3	14944591	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0612245
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.669725
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.428571
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.162162
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.547619
3	14944631	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.120968
3	14944643	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.059322
3	14944892	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.278846
3	14944910	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0344828
3	14944940	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.126582
3	14944945	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.139241
3	14944946	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.2375
3	14944954	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0416667
3	14944964	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.126761
9	15505203	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.181818
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.153846
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0909091
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.2
1	28510400	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.2
10	28523667	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0652174
10	28523689	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.037037
17	28722429	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.2
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.3125
16	31123746	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.142857
16	31123773	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.25
16	31123774	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.380952
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.105263
13	32525035	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.111111
13	32525038	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.117647
20	35713269	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.210526
19	36577150	A->G	+	ENSG00000186020	ZNF529	protein_coding	Intron	.	.	Alu	0.214286
19	38844809	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.25
19	38844917	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.111111
19	39491548	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.25
15	41298632	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0232558
15	41298634	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0212766
15	41298663	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.025641
15	41298676	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.023622
15	41298710	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0227273
15	41298734	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.056338
15	41298740	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.03125
15	41298764	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0263158
15	41298768	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0344828
15	41298774	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0564516
15	41298775	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.137097
15	41298780	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0901639
15	41298784	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0973451
15	41298797	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.025641
15	41298801	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.04
15	41298807	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0465116
15	41298815	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.16
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.2
15	41298855	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.032
15	41299136	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.258065
15	41299144	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.75
15	41299199	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0952381
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.26
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.27451
15	41299237	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0733945
15	41299245	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0689655
15	41299249	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0326087
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.393939
15	41299259	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0879121
15	41300994	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0909091
15	41301143	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0294118
15	41302238	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.181818
15	41302240	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.125
15	41302285	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0909091
15	41302323	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0727273
15	41302347	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.03125
15	41302413	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.025
15	41302414	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0246914
15	41302454	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0705882
15	41305286	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.121212
15	41305287	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.16129
15	41305325	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0588235
15	41305335	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.114286
15	41305361	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0645161
15	41305376	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0588235
15	41305379	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.371429
15	41305405	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0487805
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.465116
15	41305458	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.142857
15	41305459	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.232558
15	41305471	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.04
15	41305473	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0943396
6	42941564	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.075
6	42941571	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.171429
6	42941579	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.111111
10	43421948	A->G	+	ENSG00000230555	AL450326.1	lincRNA	Intron	.	.	Alu	0.166667
5	43574171	A->G	-	ENSG00000248092	NNT-AS1	antisense	Intron	.	.	Alu	0.142857
17	44223133	A->G	+	ENSG00000260793	AC003102.1	antisense	Intron	.	.	Alu	0.0952381
1	44777306	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.117647
17	45218324	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.1875
17	45218354	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.3125
17	47170228	A->G	-	ENSG00000004897	CDC27	protein_coding	Intron	.	.	Alu	0.214286
19	48256386	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.08
19	48256394	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0465116
19	48256514	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.111111
19	48256515	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.108696
19	48257575	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.148148
19	48257681	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.1
19	48257738	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.307692
14	55285291	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.416667
14	55285295	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.25
18	57641592	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.189189
18	57641594	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.108108
18	57641639	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.0689655
18	57641741	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.227273
14	58293911	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.104167
14	58295680	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0652174
14	58295740	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.08
14	58295747	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.125
19	58582577	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0588235
19	58582609	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0408163
19	58582630	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0545455
19	58582631	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0727273
19	58582632	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0740741
19	58584082	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.208333
19	58584088	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0952381
19	58584089	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.142857
19	58584102	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.421053
19	58584115	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.409091
19	58584165	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.185185
19	58584198	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.08
19	58584199	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.16
19	58584206	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.333333
11	65440055	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0410256
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.315068
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.244444
11	65441385	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0671642
11	65441403	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.037594
11	65441418	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0551181
11	65441426	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0559441
11	65441427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0851064
11	65441448	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0232558
11	65442678	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.182979
10	73778955	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.142857
X	73947010	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.12987
X	73947018	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0266667
X	73947054	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.04
X	73947058	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0888889
X	73947127	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.1
15	74027472	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.4
11	93734928	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.1
11	93735426	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.36
11	93735505	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.333333
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.375
8	98044109	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0869565
8	98044110	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.409091
10	98442598	A->G	-	ENSG00000107521	HPS1	protein_coding	Intron	.	.	Alu	0.0689655
12	98597599	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.142857
12	98597604	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.1875
12	98597658	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.0869565
12	98597662	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.318182
12	98597676	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.291667
13	100086530	A->G	-	ENSG00000274605	AL355338.1	lincRNA	Intron	.	.	Alu	0.2
7	100320242	A->G	-	ENSG00000214300	SPDYE3	protein_coding	Intron	.	.	Alu	0.454545
14	102348121	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.2
4	102810541	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.1875
4	102810582	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.105263
4	102810583	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.176471
10	112449496	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.388889
10	112449534	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.25
10	112449589	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.25
10	112449594	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.178571
10	112449595	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.214286
10	112449632	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.333333
10	112449646	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.166667
10	112449956	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0952381
10	112449969	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.12
10	112450010	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.176471
10	112450130	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.130435
10	112450153	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.1
10	112450154	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.142857
5	127956868	A->G	-	ENSG00000245937	LINC01184	lincRNA	Intron	.	.	Alu	0.357143
7	128529077	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.4
7	128529363	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.166667
7	128529378	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.25
7	128529388	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.176471
9	129504142	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.230769
9	129504303	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.230769
9	129504304	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.153846
9	129504313	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.25
9	129504345	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.111111
9	129504387	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.117647
9	129506678	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.133333
9	129506681	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.133333
9	129506703	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.333333
9	129506718	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.388889
9	129506758	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.275862
9	129506770	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.16129
9	129506786	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.3125
12	131897818	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.111111
12	131897824	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.1
8	144974885	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
8	144974897	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
8	144974939	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.3
4	151103663	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.166667
4	158679888	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.2
1	167640601	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0833333
1	167640651	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.09375
1	167640711	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.108108
1	167641464	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0645161
1	167641533	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0689655
1	167641535	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0689655
1	167641598	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.130435
1	174016013	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intron	.	.	Alu	0.181818
2	218256306	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.347826
1	225786970	A->G	+	ENSG00000143742	SRP9	protein_coding	Intron	.	.	Alu	0.030303
2	233140786	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.4
2	233141311	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.4
2	233141312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.6
X	299678	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.4375
X	299702	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	299806	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	300135	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	300140	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	301074	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.25
X	301090	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	301111	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	301123	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	301177	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	301185	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.6
X	301263	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	301523	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	301548	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	301887	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.384615
X	301888	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.416667
X	302703	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	302836	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	440933	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0455581
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0787097
17	441992	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0415617
17	517657	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	517658	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.380952
17	517794	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.12
11	768383	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.4
11	769359	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
11	769388	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	769393	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.176471
11	769403	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.625
11	769426	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	769453	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
11	769459	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.129032
11	769491	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.121212
11	769559	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	769581	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	769582	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	1572929	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	1572938	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.206897
17	1572943	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	1573731	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	1663523	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.121212
1	1663538	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	1663567	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.375
1	1663568	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.242424
1	1663582	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	1663592	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	1663609	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	1663635	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.24
1	1663638	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	1663698	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	1663741	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	1664099	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	1664100	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.128205
1	1664101	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.358974
1	1664121	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	1664147	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.809524
17	2418382	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.2
X	2487523	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	2487537	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.259259
4	2839954	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.25
4	2839964	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.291667
4	2839971	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.192308
X	2906198	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.37037
X	2906205	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	2906206	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	2906210	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.206897
X	2906213	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.655172
X	2906270	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	2906276	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.75
X	2906302	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.205882
X	2906312	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0571429
X	2906313	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.342857
X	2906314	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0882353
X	2906316	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	2906325	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.190476
X	2906336	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	2906344	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.432432
X	2906392	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.9
X	2906393	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.96
X	2906414	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0638298
X	2906415	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.191489
X	2906421	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.292683
X	2906433	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.209302
X	2906847	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.25
X	2906865	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	2906866	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0363636
X	2906875	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.577778
X	2906893	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.05
X	2906927	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.25
X	2906938	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.423077
X	2906942	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.12
X	2906944	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.961538
X	2906947	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.769231
X	2906961	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	2906995	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.125
X	2907017	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	2907034	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.735294
X	2907035	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.676471
X	2907078	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.888889
X	2907083	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.969697
4	2938358	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.842105
4	2938364	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.09375
4	2938371	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.354839
4	2938372	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.212121
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0857143
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.40625
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.259259
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.4
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.352941
4	2938620	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.25
4	2938637	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.363636
4	2938644	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	1
4	2938670	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.473684
4	2938682	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	2938686	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.238095
4	2938703	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.107143
4	2938711	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.515152
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.137931
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.25
6	3020572	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	3545017	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	3545056	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	3609141	A->G	-	ENSG00000196689	TRPV1	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	3808760	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	3808792	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	3824731	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.115385
20	3824732	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	3824751	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
20	3824811	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3824864	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3867455	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3867481	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3867511	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3867516	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.266667
20	3867521	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.375
20	3867545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.176471
20	3867567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.15
20	3867578	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3869544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3869566	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3869788	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3869814	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3869840	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3869848	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.416667
20	3870562	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.933333
20	3870906	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3871090	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3871115	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3871143	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3871144	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.157895
20	3872176	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3872178	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3872182	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.15
20	3872206	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	3872211	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3872273	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3872276	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	3872279	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3872280	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3872353	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	3872377	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	3872413	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3872420	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3875359	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3928513	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.157895
20	3928544	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3928568	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.454545
20	3928672	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.666667
20	3928685	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3928884	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3928886	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.107143
20	3928888	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3928889	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3928916	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3928921	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.115385
20	3928931	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.304348
20	3928934	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3928946	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.285714
20	3928954	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3928960	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.7
20	3928986	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.08
20	3929016	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.242424
20	3929017	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	3929018	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
20	3929019	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
20	3929020	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.358974
20	3929027	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
20	3929051	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.104167
20	3929066	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.265306
20	3929073	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.288889
20	3929074	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	3929233	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.135135
20	3929269	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
20	3929282	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.137931
20	3929292	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.327586
20	3929317	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.396825
20	3929331	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0363636
20	3929337	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0338983
20	3929377	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.4375
20	3929388	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.727273
20	3929390	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.348837
20	3929392	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	4653211	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	4653288	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	4653291	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	4653657	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4653661	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.7
19	4654539	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	4654542	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	4654585	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	4654589	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.238095
19	4838860	A->G	-	ENSG00000105355	PLIN3	protein_coding	three_prime_utr	.	.	Alu	0.0246914
19	5909619	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	6223184	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	6223200	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.6
19	6379786	A->G	-	ENSG00000125651	GTF2F1	protein_coding	three_prime_utr	.	.	Alu	0.057971
1	6522089	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	6522161	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.2
1	6522181	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	6522498	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	6523323	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.135135
1	6523335	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.179487
8	6643351	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	6643364	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	6643365	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	6643391	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	6643485	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	7095178	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.025641
12	7095319	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.0408163
12	7095395	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.416667
6	8014520	A->G	-	ENSG00000188428	BLOC1S5	protein_coding	three_prime_utr	.	.	Alu	0.0333333
17	8269981	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	8270043	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	8686275	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	8686293	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.245614
11	8686296	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0892857
11	8686360	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0806452
11	8686361	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.15873
11	8686370	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0405405
11	8686396	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.038961
11	8686397	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0394737
11	8686405	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	8686414	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0273973
11	8687235	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.411765
11	8687238	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.1
11	8687239	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	8687249	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
11	8687252	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	8687278	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	8687279	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.466667
16	9104214	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0275229
16	9106151	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0215054
16	9106380	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0280374
16	9106489	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0267857
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.394495
16	9106547	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.049505
16	9106548	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	9110782	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.025
16	9110931	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.05
16	9110944	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	9110970	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0222222
16	9111026	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0521739
1	9265729	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	9266895	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0392157
1	9266898	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.116279
1	9266901	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	9266924	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.128205
1	9266938	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	9267003	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	9267009	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	9267054	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0363636
1	9267081	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	9267082	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.030303
1	9267987	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.375
1	9268033	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.15
1	9268036	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	9268043	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.409091
1	9268047	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.125
1	9268061	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.28
1	9268128	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	9268141	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.171429
1	9268154	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	9268164	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.44
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.4
1	9268196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	9271016	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.104167
1	9271022	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.06
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.298246
1	9271071	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	9271117	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.134615
1	9271125	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.04
1	9271143	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.137255
1	9271168	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.174603
1	9271195	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.207547
1	9271196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	9561756	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	9562243	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	9562267	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.571429
19	9562313	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	9562431	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.125
19	9562436	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.25
19	9562437	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.125
19	9563675	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	9648529	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	9750221	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	10101569	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	10150912	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	10150924	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.485714
3	10150933	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.30303
3	10150958	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	10150968	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	10150974	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.135135
3	10151010	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.212121
3	10151020	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	10151022	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.1
3	10151063	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.25
3	10151069	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.384615
3	10151127	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	10151132	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	10151142	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	10151143	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	10151154	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	10151791	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	10151809	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0357143
3	10151810	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0338983
3	10151827	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.030303
3	10151831	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0461538
3	10151882	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0412371
3	10151922	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0816327
3	10151940	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	10151941	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0932203
3	10151971	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0252101
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.411765
3	10152190	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10457219	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	10457233	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	10457257	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10457295	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	10457324	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	10457326	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10457428	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10457995	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10458010	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10458676	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	10458677	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	10458703	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10458740	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	10458764	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	10458774	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	10458919	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	10458945	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	10458991	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	10459007	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10459831	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	10459889	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10459925	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10459988	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.3
1	10460393	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10460422	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10460592	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10460615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10460626	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10460627	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	10460645	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10460658	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10460710	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10460713	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10461069	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10461073	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	10461105	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	10461113	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	10461115	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10461143	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.375
1	10461181	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10461203	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
16	10924467	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.103448
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.172414
19	11145950	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.08
19	11145996	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	11146006	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.162791
19	11146010	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	11146013	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.294118
19	11146021	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0350877
19	11146049	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.254545
19	11146584	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	11146665	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	11146832	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	11146833	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.113636
19	11146968	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	11147028	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	11147041	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	11449574	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.707865
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	11449646	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.194175
19	11449669	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0679612
19	11449715	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0597015
19	11449718	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.135338
19	11449720	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0583942
19	11449769	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0338983
19	11449778	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0384615
19	11449809	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0357143
19	11449862	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0535714
19	11450459	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	11834879	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.173913
16	11834989	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.5
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.384615
16	11835024	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	11835030	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	11835249	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.529412
16	11835320	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11835346	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.368421
16	11835350	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	11835626	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.15
16	11837623	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0221402
8	11842699	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.247423
8	11842709	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.114583
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.385714
8	11842726	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0740741
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.121622
8	11842742	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0641026
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.123288
8	11842765	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.028169
8	11842774	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0645161
8	11842775	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.145161
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.175439
8	11842801	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0545455
8	11842813	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0392157
8	11842814	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0566038
8	11842815	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	11842818	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0810811
8	11842854	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.130435
8	11842864	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.227273
8	11842887	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.555556
8	11842909	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.571429
8	11842910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.714286
8	11843016	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	11843017	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	11843038	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	11843046	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.102041
8	11843064	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	11843086	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0526316
8	11843087	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	11843113	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.102273
8	11843122	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0444444
8	11843127	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.025974
8	11843128	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.171053
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.484375
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.25
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.172414
8	11843219	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0925926
8	11843220	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.132075
8	11843228	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.245614
8	11843774	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	11843786	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.4
8	11843787	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.3
8	11843796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.461538
8	11843814	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.545455
8	11843834	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.684211
8	11843848	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.388889
8	11843896	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0857143
8	11843908	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0384615
8	11843910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0943396
8	11843920	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.232143
8	11843945	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.025974
8	11843949	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.430556
8	11843964	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0574713
8	11843970	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0581395
8	11843971	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.134831
8	11843976	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.136986
8	11843981	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.714286
8	11843995	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0985915
8	11844000	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.410256
8	11844007	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.109589
8	11844021	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.038961
8	11844027	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0752688
19	11913652	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11913663	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	11913665	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	11913672	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.3
19	12079826	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	12080887	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	12121034	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	12631546	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	12660856	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	12661106	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.75
16	12663134	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
16	12663198	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.114754
16	12663342	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.116667
19	13773060	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	13773078	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	13773109	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	13773154	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	13773170	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	13773189	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	13773417	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	13773445	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.391304
19	13773477	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	13773494	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	13773505	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13773525	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.533333
19	13773532	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.928571
19	13773855	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.583333
19	13773890	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	13773911	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	13773913	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	13773925	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.291667
19	13773934	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.103448
6	13788021	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	13788062	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	13788110	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.136364
6	13788155	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	13789155	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.5
6	13789158	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.3
12	14498908	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	14498927	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	14499678	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	14499807	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.25
19	14734257	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.459459
19	14734269	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.290323
19	14734293	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.108108
19	14734297	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.15
19	14734311	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.727273
19	14734324	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.5
19	14734645	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.259259
19	14734646	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.259259
19	14734651	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.09375
19	14734660	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.4
19	14734664	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.148148
19	14734669	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	14734699	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.1
19	14734700	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	14734702	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.611111
19	14734708	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.26087
19	14734718	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.115385
3	15072148	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	15072149	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	15072386	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.588235
16	15409262	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.25
1	15665115	A->G	+	ENSG00000197312	DDI2	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	15700166	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	15700279	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	15700334	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.128205
4	15732501	A->G	+	ENSG00000109743	BST1	protein_coding	three_prime_utr	.	.	Alu	0.0241935
4	15850254	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.0392157
4	15852928	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	15852937	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	16155714	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.138889
19	16155738	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	16550650	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.6
19	16550675	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	16550680	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.470588
19	16550728	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	16552016	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	16552431	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	16552446	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	16552473	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	16763492	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.7
X	16764764	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	16764788	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	17110243	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.244541
22	17110269	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.130802
22	17110351	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0789474
22	17110367	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0378151
22	17110377	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.179916
22	17110383	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0262009
22	17110400	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0266667
22	17110591	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.155738
22	17110600	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.138614
22	17110647	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0671141
22	17110696	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0512821
22	17110778	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.146444
22	17113329	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.127273
22	17113332	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.553571
22	17113334	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	17113449	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.167939
22	17113458	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.149254
22	17113459	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.177778
17	17186598	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	17186612	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	17186661	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.3
7	17344729	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.117155
7	17344730	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.654167
7	17344734	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.076
7	17344747	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0284091
7	17344769	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.135802
7	17344771	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.136905
7	17344795	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0502513
7	17344810	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0510204
7	17344813	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.567742
7	17344816	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.535032
7	17344838	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.04375
7	17344890	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.360248
7	17344891	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.12963
7	17344903	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.235294
7	17345061	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.123711
7	17345062	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.27451
7	17345106	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.270833
7	17345131	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0247525
7	17345139	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0241546
7	17345150	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.257778
7	17345155	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0920502
7	17345168	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0230769
7	17345194	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.20229
7	17345204	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0214286
7	17345208	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.228477
7	17345256	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.20462
7	17345258	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.237458
7	17345263	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.193878
4	17626094	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	17703076	A->G	+	ENSG00000099968	BCL2L13	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17801333	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17801356	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.294118
4	17801386	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.454545
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.68
4	17801936	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.583333
4	17801939	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	17801981	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17801991	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	17801993	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	17801994	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17802039	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.421053
4	17802050	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	17802058	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.466667
4	17803087	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0810811
4	17803117	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	17825712	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.118644
19	17825737	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.102564
22	18088511	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.222222
22	18088572	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.107143
22	18088579	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	18088602	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.15625
22	18088636	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0731707
22	18088655	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.302326
22	18088665	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.175
22	18088691	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0888889
22	18088708	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.3
22	18088711	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.193548
22	18089831	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.416667
22	18089884	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.238095
22	18089887	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	18089909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.521739
22	18089953	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	18089962	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	18089963	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.321429
22	18089964	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.357143
22	18089976	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	18272871	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18364358	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	18364359	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	18364412	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.529412
19	18364413	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.705882
19	18364467	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	18364493	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	18364535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.321429
19	18364546	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.09375
19	18365484	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18365552	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	18365605	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.178571
19	18365606	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.178571
19	18365618	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	18366502	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18366535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18366600	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	18366610	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	18366876	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	18366886	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18366892	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18366943	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	18366951	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	18366990	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	18366993	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18367009	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	18367041	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	18367049	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	18367075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18367091	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.625
19	18367113	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18367958	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	18367966	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	18368012	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.444444
19	18368048	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	18368075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	18487695	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.52381
20	18487707	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	18487708	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.238095
20	18487717	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	18487735	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.1
20	18487824	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	18487829	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.125
20	18487830	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.125
20	18487867	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.4
20	18487868	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.148148
20	18487893	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.0588235
20	18488404	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.4
20	18488443	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.3
20	18488498	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.2
20	18488533	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	18488538	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.4
20	18488539	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.4
1	19215816	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19215839	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	19215850	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	19216127	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	19216137	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.565217
1	19216185	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	19216199	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	19216855	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	19216858	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.25
1	19216862	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	19216962	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	19216963	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.3
1	19216965	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.8
1	19216971	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	19217289	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	19217291	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	19217303	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	19217304	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	19217385	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	19217405	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	19217470	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.25
1	19217479	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	19258999	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	19259008	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	19259025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.447368
1	19259060	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	19259961	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	19259964	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.65
1	19259985	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	19260007	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	19260025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.08
1	19260026	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.192308
1	19260038	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.4
1	19329136	A->G	+	ENSG00000040487	PQLC2	protein_coding	three_prime_utr	.	.	Alu	0.170732
13	19672201	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.192308
13	19672219	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.419355
13	19672225	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0588235
13	19672245	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.257143
13	19672262	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.481481
13	19672378	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0740741
13	19672406	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	19672838	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.08
13	19672866	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.09375
13	19672883	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.459459
13	19672884	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.432432
13	19672889	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.205128
13	19672935	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.125
13	19672976	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	19680684	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.2
19	19681590	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	19681594	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	19681599	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.25
19	19681647	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	19683066	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.555556
19	19683067	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.75
19	19792233	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.470588
10	20284282	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.242424
10	20286764	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.190476
10	20286781	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0652174
10	20286805	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	20286825	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
10	20286854	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.08
10	20286904	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.193548
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.110345
1	20652097	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.03125
22	20890612	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0425532
22	20890638	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.116279
22	20890912	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	21185530	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.5
19	21185538	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.5
19	21185751	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21291602	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.230769
13	21374317	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.37037
13	21374321	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.1
13	21374336	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0675676
13	21374353	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.276316
13	21374356	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.411765
13	21374363	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.730337
13	21374428	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0375
13	21374430	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.037037
13	21374431	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.207317
13	21374436	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0263158
13	21374437	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.306667
13	21374438	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.565217
13	21374439	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.30137
13	21374462	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0588235
13	21374485	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.290323
13	21374486	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.42623
13	21374507	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.168675
13	21374508	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.204819
13	21374516	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.328767
13	21374889	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.193548
13	21374899	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.103448
13	21374908	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.172414
13	21374913	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	21374916	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.324324
13	21374945	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0363636
13	21374954	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.294118
13	21374968	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.485714
13	21374969	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0285714
13	21374971	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0533333
13	21375010	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.038961
13	21375012	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.333333
13	21375022	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.74026
13	21375026	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.297297
13	21375049	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0322581
13	21375052	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0952381
13	21375058	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.314286
13	21375072	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.227848
14	21460687	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.25
14	21460692	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.785714
14	21460751	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.857143
14	21460752	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	21460781	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	21460885	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	1
14	21460886	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.5
18	21632002	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
18	21632197	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	21639981	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.529412
16	21640031	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.692308
16	21640035	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	21640167	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.571429
16	21640184	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	21640210	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	21640211	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.315789
16	21640219	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.75
19	21806249	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	21806359	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.5
19	21806360	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.2
16	22285539	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.68
16	22285570	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	22285617	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	22285915	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.473684
16	22285946	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.129032
16	22285956	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0882353
16	22285974	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0857143
14	22834767	A->G	+	ENSG00000172590	MRPL52	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	23465185	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0655738
16	23465257	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.108696
16	23465260	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.404255
16	23465266	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0454545
16	23465274	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	23465684	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	23465698	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.05
16	23465858	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	23921714	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.4
3	23921849	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	23921898	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	23921918	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	23921980	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	23922123	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	23922148	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	24000289	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0784314
2	24000377	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	24000386	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	24000421	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	24000444	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	24000483	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	24001173	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24001264	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	24001267	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24002678	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.7
2	24002693	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	24004445	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	24077133	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0223881
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0221607
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0245232
X	24077203	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0218978
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.128302
X	24077266	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.030303
14	24125090	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	24572551	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	24572562	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0434783
22	24572605	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0454545
22	24572607	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.047619
22	24572611	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.131579
22	24572640	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0408163
22	24572646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	24572667	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0612245
22	24572682	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	25121067	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	25121805	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	25446269	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	25446270	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	25447658	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.833333
20	25447672	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.5
20	25447867	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	25447911	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.285714
20	25447951	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.411765
20	25447952	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	25447954	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.125
20	25447965	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	25448010	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.416667
20	25448088	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	25448114	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	25725098	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.263158
22	25725110	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.642857
22	25725683	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.857143
22	25725691	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	25725692	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.25
22	25725763	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	26524425	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	26524431	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	26524445	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	26524450	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	26524476	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.416667
22	26525285	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.785714
1	28335320	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	28335812	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	28498819	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.47619
1	28498825	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28498828	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28498858	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	28498869	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	28498884	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.227273
1	28498903	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28498906	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.4
1	28498907	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	28498915	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	28498918	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	28498921	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	28499503	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	28499519	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	28499678	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.538462
16	28965572	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29665079	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.15625
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.172775
16	29665119	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.123853
16	29665148	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0316742
16	29665149	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0219298
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.10917
16	29665184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.035
16	29665185	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0821256
16	29665189	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.028169
16	29665194	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0295567
16	29665216	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0536913
16	29665230	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29665239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.045045
16	29665253	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0614035
16	29665256	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.092437
16	29665290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29665299	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.101266
16	29665308	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.10582
16	29665317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0260417
16	29665318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0846561
16	29665325	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0247525
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0350877
16	29666269	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.035503
16	29666274	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0337838
16	29666342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0365297
16	29666351	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0987654
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.146067
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.747253
16	29667528	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0235294
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.152542
16	29667545	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0517241
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.188679
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29667577	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.218182
16	29667598	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0377358
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29667611	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.06
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12963
16	29667615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0754717
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.192308
16	29667617	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.06
16	29667618	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29667620	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29667625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29667661	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0379747
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0864198
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.202381
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0595238
16	29667697	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0232558
16	29667708	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0421053
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.123596
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.216216
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.16
16	29667778	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0422535
16	29667782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.027027
16	29667783	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0246914
16	29667784	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0853659
16	29667785	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0243902
16	29667791	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0238095
16	29667792	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105882
16	29667796	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.075
16	29668212	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.395062
16	29668220	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.103093
16	29668229	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0581395
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.451613
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.446429
16	29668275	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29668277	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29668292	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0888889
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.289474
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.319149
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.533333
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.195652
16	29668329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0545455
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.283333
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0517241
16	29668486	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29668493	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.314815
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.538462
16	29668525	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.229167
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.152174
16	29668539	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0697674
16	29668541	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.472222
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.228571
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.484848
16	29668600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.322581
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29668670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	29668682	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0545455
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0980392
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.145455
16	29668710	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.448276
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29668713	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.245902
16	29668724	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0266667
16	29668876	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.103896
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0533333
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	29668909	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0289855
16	29668913	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0333333
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12963
16	29668961	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.14
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0731707
16	29668998	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.393443
16	29669030	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0322581
16	29669033	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.109375
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.102564
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.234568
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0972222
16	29669069	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12766
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0808081
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.175258
16	29669105	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0322581
16	29669128	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	29669241	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.545455
16	29669258	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29669279	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.421053
16	29669281	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669302	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29669303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	29669306	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29669319	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.555556
16	29669331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29669341	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.578947
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.129032
16	29669384	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	29669398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.163265
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.590164
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29669423	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	29669461	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.134831
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.517241
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.777778
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	29669624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.6
16	29669625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.533333
16	29669670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.8
16	29669678	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.533333
16	29669679	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.8
16	29669681	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29669866	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.139241
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29669972	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0379747
16	29669977	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.05
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.417722
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.134146
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	29670046	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0707071
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	29670090	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.02
16	29670091	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0277778
16	29670098	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0582524
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0990099
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0542636
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.322314
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0569106
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0743802
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0891089
16	29670200	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0206186
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0594059
16	29670230	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.025
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.127119
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.336
16	29670288	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0462963
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.252336
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.115385
16	29670303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.021978
16	29670305	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0470588
16	29670312	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.025
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.126582
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0273973
16	29670327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	29670328	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0941176
16	29670329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105882
16	29670330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0235294
16	29670331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0235294
16	29670339	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0694444
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0327869
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.169492
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0877193
16	29670374	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0363636
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.22807
16	29670395	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29670401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0289855
16	29670417	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.134328
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.16
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.197917
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.11828
16	29670471	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.108696
16	29670476	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.049505
16	29670477	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0508475
19	29701052	A->G	-	ENSG00000131943	C19orf12	protein_coding	three_prime_utr	.	.	Alu	0.3
13	30457256	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.111111
13	30457474	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.103448
13	30457483	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.222222
8	30678389	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.235294
8	30678390	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.198582
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.327957
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.459016
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.214815
8	30678499	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.160305
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.321168
8	30678608	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0584416
8	30678626	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0528846
8	30678629	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0248756
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.468421
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.234375
8	30678893	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0469799
8	30678920	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0344828
8	30678933	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0502092
8	30678967	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0264317
8	30679027	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.314433
8	30679037	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.118056
8	30679049	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	30679066	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.175258
8	30679067	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0362694
8	30679086	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.502994
8	30679089	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.319527
X	30836586	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31093962	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	31282473	A->G	-	ENSG00000139146	SINHCAF	protein_coding	three_prime_utr	.	.	Alu	0.0315789
12	31282474	A->G	-	ENSG00000139146	SINHCAF	protein_coding	three_prime_utr	.	.	Alu	0.02
12	31282514	A->G	-	ENSG00000139146	SINHCAF	protein_coding	three_prime_utr	.	.	Alu	0.0240964
12	31282522	A->G	-	ENSG00000139146	SINHCAF	protein_coding	three_prime_utr	.	.	Alu	0.028169
12	31282539	A->G	-	ENSG00000139146	SINHCAF	protein_coding	three_prime_utr	.	.	Alu	0.0232558
11	31431131	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	31431137	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	31431147	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.4
14	31447721	A->G	-	ENSG00000203546	AL139353.1	protein_coding	three_prime_utr	.	.	Alu	0.285714
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.117647
18	32068946	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32068949	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.25
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.428571
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.4
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070206	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	32070300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.1
18	32070339	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.08
18	32070433	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0952381
18	32070766	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.181818
18	32070808	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070870	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070871	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070924	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.230769
18	32070965	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.25
18	32070966	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	32070978	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	32071300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.12
18	32071399	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.130435
18	32071923	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.222222
18	32071927	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0952381
18	32071974	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0882353
18	32072002	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0512821
18	32072090	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	32072093	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	32072094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.230769
18	32072103	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	32307740	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32307741	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32310622	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.25
2	32310623	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	32310678	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32310679	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32310767	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	32310831	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32310833	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	32399024	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.416667
13	32399052	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.25
13	32399063	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.375
13	32399091	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.117647
13	32399099	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.105263
13	32400020	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	32400038	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.214286
13	32400048	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	32621211	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	32682314	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	32682327	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	32682346	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32682595	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.4
12	32744662	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.0322581
12	32744663	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.0333333
11	32853772	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.05
21	33263948	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.6875
21	33263955	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.125
21	33263988	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.571429
21	33263998	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.52
21	33264042	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.375
21	33264056	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.791667
21	33264079	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.892857
21	33264080	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.482759
21	33264718	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.8
21	33264774	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.115385
21	33264779	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.148148
21	33264783	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.615385
21	33264788	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	33264835	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.307692
21	33264840	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.230769
21	33264844	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.583333
21	33264854	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.571429
21	33264916	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.75
21	33264920	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.666667
21	33264941	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.45
6	33300472	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0373832
6	33301511	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0411985
6	33301530	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0224719
21	33355763	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
21	33355830	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
21	33358771	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.285714
15	34231214	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	34231250	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.3
15	34231279	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.5
15	34231315	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	34231318	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.176471
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.588235
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.529412
15	34231722	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.5
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.545455
15	34232344	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.230769
15	34232392	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	34470204	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	34908348	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	34908357	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	34908407	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	35010676	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0298507
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	35602113	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
1	35602127	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
1	35602139	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.361702
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.466667
1	35602165	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0491803
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.296296
1	35602216	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	35602220	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	35602232	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.08
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.782609
1	35602285	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.823529
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.529412
1	35602594	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	35602595	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.291667
1	35602636	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	35602642	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	35602675	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	35602677	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.193548
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.206897
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.36
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.387755
1	35602763	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.314607
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.595506
7	35633342	A->G	-	ENSG00000122557	HERPUD2	protein_coding	three_prime_utr	.	.	Alu	0.0333333
22	35659905	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.28
22	35659927	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.137931
22	35659950	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.139535
22	35659964	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.372093
22	35659976	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.262295
22	35661142	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.136364
22	35661158	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0454545
22	35661159	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.454545
22	35661178	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	35661201	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.241379
22	35661204	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.16
22	35661214	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.130435
22	35661237	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.428571
22	35661247	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35856712	A->G	+	ENSG00000134698	AGO4	protein_coding	three_prime_utr	.	.	Alu	0.0232558
9	36216765	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	36216777	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	36216783	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.304348
9	36216800	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	36216841	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	36216842	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.115385
9	36216898	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.357143
22	36266900	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.2
21	36293862	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.125
21	36293883	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.138889
21	36293907	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.157895
20	36890602	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	37028686	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0823529
2	37102068	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37102071	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.391304
2	37102074	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.192308
2	37102092	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37102095	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4
2	37102118	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	37102140	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	37102164	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.393939
2	37102170	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	37102171	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	37102188	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	37102204	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37102209	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.178571
2	37102226	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	37103876	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37103880	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.132075
2	37103882	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.188679
2	37103894	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37103895	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.347826
2	37103922	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.205128
2	37103934	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37103946	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37103956	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	37103973	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	37103976	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.391304
2	37104018	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37104078	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.5
2	37104382	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.526316
2	37104388	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	37104471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37104484	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37104496	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.1
2	37104497	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.1
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	37104521	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37104523	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	37104568	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	37104593	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	37104603	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.352941
2	37202389	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	37202390	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.137931
2	37202469	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37202498	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37202524	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	37202534	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.241379
2	37202546	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	37202595	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.25
2	37204331	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.145833
2	37204377	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0677966
2	37204378	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.116667
2	37204395	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	37204407	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	37204420	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.102564
2	37204458	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.139535
2	37204461	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.432432
2	37204536	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0277778
2	37204537	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0273973
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37204550	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0266667
5	37290221	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.25
5	37290233	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.217391
5	37290298	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.125
5	37290314	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.5
5	37290365	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.866667
5	37290390	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.4
5	37290391	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.5625
5	37290402	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	37291310	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.1
5	37291344	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.9
17	37477738	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.2
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.122807
9	37503370	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0483871
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.137931
9	37503457	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0566038
9	37503458	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0566038
9	37503467	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0576923
9	37503498	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0714286
9	37503541	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.127273
9	37503558	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0327869
17	37612349	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.5
17	37612372	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	37860922	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	37860971	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.315789
1	37860989	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37861011	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	37861028	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.3
1	37861056	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	37861061	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.08
1	37861066	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	37861101	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	37861102	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	37861785	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	37861791	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	37861815	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	37861819	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	37861844	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	37861873	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	37861906	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	37861912	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.461538
22	37889325	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.111111
7	38723466	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.294118
7	38723468	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.352941
7	38723474	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.823529
7	38723531	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.3
7	38723551	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	1
7	38724686	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.454545
7	38724718	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	38724722	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	38724740	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	38724742	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.235294
7	38724758	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.533333
7	38724795	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.173913
7	38724805	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	38724859	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.555556
7	38724865	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	38849582	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.347826
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.571429
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	38849890	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	38849961	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.3
17	38849970	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	38849996	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	38868084	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.490196
19	38868085	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	38868139	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0731707
19	38868163	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.139535
19	38868164	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.348837
19	38868182	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.243243
19	38868217	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	38868388	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.2
19	38868411	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	38868412	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	38868415	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.625
19	38868430	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.344828
19	38868460	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.322581
19	38868510	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.25
19	38868512	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	38868589	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.377358
19	38869028	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.138889
19	38869067	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.451613
19	38869073	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.172414
8	38970679	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0470588
8	38970718	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.12069
8	38970719	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.174603
8	38970743	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
8	38970748	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.261905
8	38971692	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.116667
8	38971701	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0533333
8	38971706	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0519481
8	38971782	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.046875
8	38971783	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0461538
8	38971800	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.047619
8	38971810	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	38971816	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.274194
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.359375
8	38971832	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0704225
8	38971897	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	38971934	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
8	38972218	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.271186
8	38972235	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.265306
8	38972256	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	38972320	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.445946
8	38972326	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.207317
8	38972328	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.22619
8	38972446	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0842105
8	38972447	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.350515
8	38972958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0576923
8	38972961	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.145455
8	38972977	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0447761
8	38972981	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0294118
8	38972993	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0224719
8	38973012	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.121951
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.170213
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
8	38973066	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	38973067	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.193548
8	38973070	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	39018748	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.143836
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0405405
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.256
22	39018895	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0471698
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.395349
22	39018912	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0298507
22	39018918	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0342466
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.467532
22	39019869	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0487805
22	39019870	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0238095
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.184783
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.752577
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0520833
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.578947
22	39019976	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0609756
22	39019979	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.031746
22	39020018	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0851064
22	39020030	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.482143
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.113821
22	39020058	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0465116
22	39020070	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.027972
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.389706
22	39053349	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.5
17	39256155	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.227273
17	39256199	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	39491951	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	39491952	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	39491953	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	39491979	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	39491980	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	39491986	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	39491991	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	39549083	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	39549156	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	39549167	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	39549347	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.8
4	39549358	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.842105
4	39549388	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.727273
4	39549398	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.318182
4	39549404	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	39549487	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	39549520	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	40662781	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	40662784	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.1
15	40662795	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.290323
15	40662798	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.137931
15	40662799	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	40662800	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.16129
15	40662801	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.266667
15	40662809	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	40662813	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	40662892	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.571429
15	40662935	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.416667
15	40663318	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	40663319	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.227273
15	40663331	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.190476
15	40663333	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	40762017	A->G	-	ENSG00000132356	PRKAA1	protein_coding	three_prime_utr	.	.	Alu	0.027027
5	40827849	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	40830362	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.217391
5	40830363	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.26087
5	40830389	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	40830593	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.25
5	40831163	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	40831173	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	41542596	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	41543950	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	41543969	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.3
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.612903
19	41871518	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	41871544	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	41871556	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	41872624	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.125
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.26087
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.45
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.1
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.318182
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.604651
19	41872801	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	41872803	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.138889
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.108108
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.102564
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.148936
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	42057691	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	42078150	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	42078850	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.25
6	42079616	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.137931
6	42079624	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.121212
6	42079637	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.25
6	42079688	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	42079814	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0857143
6	42079815	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42080538	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42080623	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	42080651	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0851064
6	42207346	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	42207359	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	42207404	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0384615
15	42532257	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0291262
15	42532271	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0263158
15	42543009	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	42543475	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0882353
15	42567144	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
15	42567145	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
15	42567151	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
15	42567307	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
15	42567308	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
15	42567320	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.114286
15	42567538	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
15	42567584	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	42567788	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	42567882	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.136364
15	42569407	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.357143
15	42569432	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	42569433	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	42569507	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	42569541	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	42569542	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.148148
15	42569569	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	42886873	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42886895	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	42886943	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
6	42886954	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42887319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0227273
6	42887368	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0895522
6	42888176	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.05
6	42888198	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.037037
6	42888210	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.339286
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.481481
6	42888229	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0508475
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.196721
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.192982
6	42888269	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
6	42888281	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0322581
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.516667
6	42888301	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
6	42888304	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
6	42888309	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.263158
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.358974
6	42888317	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.225
6	42888318	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.25
6	42888367	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	42888372	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.736842
6	42888378	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.666667
6	42888380	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42888418	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.186047
6	42888420	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
6	42888432	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.04
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.462963
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.237288
6	42889177	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.746032
6	42889186	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0428571
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.186441
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
6	42889221	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
6	42889226	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.027027
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.129412
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.2
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.140845
6	42889288	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.428571
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0566038
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.115385
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.173913
6	42889382	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.138889
8	43020436	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.473684
8	43020450	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43020458	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020459	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43020505	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43020528	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.454545
8	43020529	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.545455
8	43020593	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43020646	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	43020671	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.315789
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.208333
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	43020845	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	43020846	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43020872	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.193548
8	43020891	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	43020905	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.15625
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	43020924	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43020939	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020952	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	43020955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	43020959	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	43020981	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.238095
8	43020987	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.130435
8	43021014	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.238095
8	43021030	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	43021343	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.128205
8	43021365	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.175
8	43021368	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
8	43021378	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
8	43021383	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.130435
8	43021403	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.185185
8	43021404	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.185185
8	43021407	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	43021421	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	43021433	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.352941
8	43021443	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.578947
8	43021445	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	43021483	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43021486	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.722222
8	43021500	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43021544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	43021563	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43021575	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021854	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43021943	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.433333
8	43021965	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	43023552	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	43023553	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	43023582	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	43023586	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.733333
8	43023708	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43023722	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	43026923	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.08
8	43028220	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43029211	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.177778
8	43029276	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	43029279	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0816327
8	43029280	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.134615
8	43029333	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43029422	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	43218068	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	43218397	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.277778
17	43218405	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.3125
17	43218414	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	43218441	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.5
17	43219472	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	43615301	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	43615496	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	43787802	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0487805
12	43787828	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.09375
12	43787848	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.137931
12	43787870	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	43787871	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.190476
12	43787880	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	43787881	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	43787936	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.346154
12	43787946	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.16
12	43787971	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.173913
12	43788748	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	1
12	43788772	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.192308
22	44170094	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	44170113	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	44450098	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.32
6	44450138	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	44578744	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0309278
7	44578754	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0309278
7	44578828	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	44580909	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	44749132	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	44749199	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	44749207	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	44749224	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.125
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.8
3	44749281	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	44749367	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.545455
3	44749387	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	44749411	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749412	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749859	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.6
3	44749914	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	44749944	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.2
3	44749966	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	44749967	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749985	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.2
3	44750055	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.3125
3	44750061	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	44750062	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.5625
3	44750078	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.2
7	44801870	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.03125
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.901786
7	44801894	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0560748
7	44801910	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0300752
7	44801912	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0451128
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.172932
7	44801990	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.113924
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.709091
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.425926
7	44802334	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.203704
7	44802423	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0526316
13	45030505	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.6
20	45077457	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.146853
20	45077460	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0641026
20	45077525	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0503145
20	45078229	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	45078299	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.22807
20	45078305	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0508475
20	45078306	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.354839
20	45078309	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	45078310	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0491803
20	45078345	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
20	45078347	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.208333
20	45078396	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0447761
20	45079028	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0789474
20	45079058	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.025641
20	45079068	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.482456
20	45079076	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0265487
20	45079095	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.119266
20	45079118	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.175
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.389474
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.776699
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.128205
20	45079149	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0471698
20	45079173	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0884956
20	45079198	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0661157
20	45079200	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0756303
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.520661
22	45340841	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
22	45340863	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.0681818
22	45340903	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.115385
22	45340920	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.0652174
22	45340968	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.0806452
22	45340983	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.03125
22	45340986	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.0983607
22	45341037	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.025641
22	45341046	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.046875
22	45341071	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.028169
1	45509673	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.7
19	45549650	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	45549659	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	45549673	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.7
19	45549676	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	45549717	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.5
19	45550071	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	45550101	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	45550111	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	45551245	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	45680608	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	1
1	46364622	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	46604606	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.2
X	46605009	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	46605988	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.5
8	47977073	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0674847
8	47977099	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.056338
8	47977112	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0738255
8	47977113	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.027972
8	47977145	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.020979
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.283422
8	47977554	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0671141
16	48352384	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.15625
16	48352390	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	48352391	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	48352513	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48352514	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	48353264	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.325
16	48353290	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48353359	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	48353367	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.125
16	48353385	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.416667
16	48353444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	48354334	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.5
16	48354347	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	48354443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	48354469	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	48354471	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	48354472	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	48354483	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.15
X	48577960	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.0294737
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.484848
3	48749578	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.138889
3	48749618	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
3	48749619	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
3	48749675	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	48749685	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.304348
3	48749709	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	48749752	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	48749759	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.05
3	48750019	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	48750033	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.411765
3	48750129	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.25
3	48750147	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.103448
3	48750200	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0857143
3	48750207	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	48750239	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0454545
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.232558
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	48750263	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	48750280	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0652174
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.209302
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	48750301	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
3	48750473	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
3	48750476	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.473684
17	48864316	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
3	49415261	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0298507
3	49415262	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0441176
3	49415354	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0847458
3	49415355	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0517241
3	49415419	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.138889
17	49830409	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	50105351	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	50105383	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.3
16	50105572	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.321429
16	50105604	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.774194
16	50105606	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	50105615	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.28
16	50105645	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	50105651	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.4
16	50105652	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	50105669	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.52381
16	50105681	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50325958	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50325974	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	50325975	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	50325998	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50326005	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	50326020	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1
14	50326055	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	50326083	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.210526
14	50326119	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50326136	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50326145	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50326859	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50326985	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.24
14	50326986	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.125
14	50327103	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	50327535	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	50327590	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.384615
14	50327594	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	50327604	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	50327606	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	50327645	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.466667
14	50327648	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	50327665	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50327674	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1875
18	50392443	A->G	+	ENSG00000154839	SKA1	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	50393235	A->G	+	ENSG00000154839	SKA1	protein_coding	three_prime_utr	.	.	Alu	0.571429
16	50673085	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	50673129	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0273973
16	50673189	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0322581
16	50673193	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0289855
16	50673254	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0487805
12	50930339	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.236842
12	50930344	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0409836
12	50930380	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.172185
12	50930397	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0679612
12	50930406	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0327869
12	50930409	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.172932
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.241667
12	50930441	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0253165
12	50930458	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0301205
12	50930475	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0914634
12	50930525	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.040404
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.219512
12	50930539	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0315315
12	50930540	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.190045
12	50930561	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0251256
12	50930601	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0204082
12	50930640	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0266667
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.303965
12	50930658	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0440529
12	50930661	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0430622
12	50930664	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0746269
12	50930670	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0838323
12	50930683	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.043956
12	50930684	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.207071
12	50930701	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0777778
12	50930713	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.220096
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.247619
12	50930739	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.06
12	50930762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.119403
12	50930802	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0202429
12	50930843	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0737705
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.244898
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.298113
12	50931446	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.322581
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.319149
12	50931493	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0235294
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.361446
12	50931504	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	50931505	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0487805
12	50931506	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.241935
12	50931528	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
12	50931564	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.32
12	50931568	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0377358
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.115942
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50931596	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.038961
12	50931600	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0410959
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.141026
12	50931636	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.126437
12	50931652	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0470588
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.26506
12	50931663	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.025974
12	50931671	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	50931694	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.170213
12	50931752	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.217391
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.491228
12	50931762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0246914
12	50931800	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0632184
12	50931812	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.08
12	50931827	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0253807
15	51913758	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.184211
15	51913774	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0588235
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.228571
15	51913812	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.107143
15	51913818	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.12
15	51913933	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.416667
15	51914115	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	51914393	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.411765
15	51914409	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.684211
15	51914410	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.684211
15	51914460	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.230769
15	51914493	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.583333
15	51914502	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.357143
15	51915004	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.583333
19	52556444	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	52556466	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	52556586	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	52691084	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
13	52691217	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	52691218	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	52775636	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.222222
14	52775707	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	52775760	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.571429
14	52775770	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	52775782	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
14	52775800	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	52776141	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	52776676	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.764706
14	52776688	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	52776693	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.6
14	52776694	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	52776716	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	52776720	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52797871	A->G	-	ENSG00000198538	ZNF28	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	52823198	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.4
1	52823252	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	52823875	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.439024
1	52823898	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52823911	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	52824014	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	52824016	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.323529
1	52824086	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	52824087	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.461538
1	52824201	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.444444
1	52824207	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.15
1	52824220	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.421053
1	52824268	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.419355
1	52824594	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	52824626	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.388889
1	52825723	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	52825736	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	52825748	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.533333
1	52825753	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	52825762	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.172414
1	52825763	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.310345
19	52839063	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	53411158	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.4
19	54216585	A->G	-	ENSG00000204577	LILRB3	protein_coding	three_prime_utr	.	.	Alu	0.03125
19	54237137	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.14
12	54240499	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.192308
12	54240500	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.12
12	54240516	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	54353962	A->G	-	ENSG00000167613	LAIR1	protein_coding	three_prime_utr	.	.	Alu	0.0208333
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.826087
X	54560777	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	54560785	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	54560786	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.545455
15	55317377	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.031746
15	55317452	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
14	55368248	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.466667
4	56459955	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0571429
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.25641
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.243902
4	56459990	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
4	56459993	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0701754
4	56460020	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0571429
4	56460070	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0307692
4	56460096	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.65
4	56460126	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0246914
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.197183
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.236111
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
4	56460161	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0416667
4	56460163	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0263158
4	56460167	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.116883
4	56460707	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0638298
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.372549
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.288462
4	56460785	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0289855
4	56460794	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0655738
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.261905
4	56460856	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0434783
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.385714
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.863636
4	56460950	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0405405
3	57272806	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	57272860	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	57272873	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.05
3	57626453	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	57626662	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	57646338	A->G	+	ENSG00000146143	PRIM2	protein_coding	three_prime_utr	.	.	Alu	0.612903
19	57757017	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	57757019	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	57757047	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57757104	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.391304
19	57807717	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.4
19	57863827	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.466667
19	57863828	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.4
19	57864869	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1
3	58318551	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	59201707	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.15
17	59201709	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.261905
17	59201738	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	59201761	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	59201795	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0487805
17	59201806	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0810811
17	59201810	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	59201834	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	59201851	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0689655
17	59201860	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	59201872	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	59201903	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.375
17	59201920	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	59201921	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.428571
17	59203468	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	59203477	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.666667
17	59203485	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.125
17	59203499	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	59203604	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.135135
17	59203626	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.108108
17	59203649	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.115385
17	59203660	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.315789
17	59203673	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	59203694	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	59203697	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	59203698	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.357143
17	59203715	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.461538
17	59203737	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.130435
17	59203753	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	59203764	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	59204152	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.101695
17	59204161	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0307692
17	59204234	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.038835
17	59204253	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0204082
17	59204328	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0689655
15	60422185	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	60422221	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.6
15	60422224	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.727273
15	60422301	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.466667
15	60422302	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.75
15	60422303	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.529412
15	60422390	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.137931
15	60422717	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.666667
15	60422727	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.789474
14	61796081	A->G	+	ENSG00000023608	SNAPC1	protein_coding	three_prime_utr	.	.	Alu	0.2
11	61800254	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.09375
11	61800286	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	62449501	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	64322812	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0225564
17	64322854	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0242424
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	64322887	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.039823
17	64322889	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0277778
17	64322944	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.027933
17	64322997	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.121622
17	64323002	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.02
15	64364824	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.1
15	64365331	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.136364
12	64448979	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	64448989	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.296296
12	64449012	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	64449013	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	64449022	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	64449039	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	64449074	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.611111
12	64449075	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.555556
12	64449140	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.4
12	64449145	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	64450281	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.708333
12	64450291	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.962963
12	64450338	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	64450354	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.583333
12	64450369	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.678571
12	64450387	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	64450419	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0882353
17	64467719	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	64467724	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	64468339	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.895238
17	64468389	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0933333
17	64468399	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
17	64468418	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0608696
17	64468430	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.037037
17	64468450	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0824742
17	64468454	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.04
17	64468563	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0387597
17	64468566	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.056
15	65149228	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	65149326	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.3125
15	65149327	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.125
15	65149386	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	65149439	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	65149663	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.363636
15	65149694	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.571429
15	65149697	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	65149760	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	65149774	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	65149777	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	65149778	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	65149784	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.1875
15	65150138	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.48
15	65150145	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	65413172	A->G	+	ENSG00000126391	FRMD8	protein_coding	three_prime_utr	.	.	Alu	0.075
15	65659409	A->G	-	ENSG00000074621	SLC24A1	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	65775920	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0519481
11	65775921	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.169935
11	65775963	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0776699
11	65775967	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.104167
11	65775987	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0545455
11	65776002	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.21519
11	65776029	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
11	65776066	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0679612
11	65776158	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0594059
11	65776163	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.21
11	65776871	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.152047
11	65776884	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0440252
11	65776894	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0955056
11	65776910	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.316514
11	65776911	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.297561
11	65776955	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.177914
11	65776999	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0992908
11	65777014	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0787402
11	65777019	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.330882
11	65777032	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.287879
11	65777052	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.372881
11	65777096	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.576159
11	65777104	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.11811
12	66123161	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0588235
7	66153218	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0232558
7	66153251	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0246914
7	66153252	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0365854
7	66153254	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0519481
7	66153259	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	66153262	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0434783
7	66153267	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0961538
7	66153284	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.05
7	66153292	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	66153308	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.12
7	66153310	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.102041
7	66153318	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0566038
7	66153319	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0754717
7	66153328	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0612245
7	66153345	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	66153389	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
7	66153789	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0338983
7	66153799	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0447761
7	66153805	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.046875
7	66153806	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0454545
7	66153858	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	66153872	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0377358
7	66153873	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0566038
7	66153875	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.244898
7	66153883	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.232558
7	66153889	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0816327
7	66153895	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	66153899	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0784314
7	66153900	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.115385
7	66153932	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	66153941	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	66153946	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	66153973	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	66153982	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0697674
7	66153993	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.136364
7	66154237	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0857143
7	66154250	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.468085
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.34
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	66154269	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	66154276	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0545455
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.673077
7	66154316	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0392157
7	66154326	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0408163
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.244898
7	66154357	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	66154360	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.254237
7	66154366	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.20339
7	66154379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.223881
7	66154391	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.147059
15	66333542	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.192308
15	66333543	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.2
11	66520807	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.35
11	66520826	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.125
11	66520854	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.25
11	66524241	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	67339204	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.4
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.642857
1	67409008	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.390244
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	67409048	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.625
1	67409142	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.119048
1	67409166	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	67409176	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	67409184	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.1
11	68755589	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	68755605	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	68755612	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	68755614	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.411765
11	68755870	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	68755871	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.15625
11	68755888	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	68755929	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	68755951	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.294118
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.583333
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	68766231	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.25
12	68766232	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.125
5	69210267	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.318182
5	69280913	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.16
5	69280917	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.481481
5	69281278	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	69281292	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	69325491	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.4
16	69325492	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.3
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.555556
16	70248678	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.151515
16	70248685	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	70248707	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	70248723	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.529412
16	70249181	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.323529
16	70249236	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	70249298	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.103448
16	70249315	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.458333
16	70249322	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.25
16	70249335	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	70249336	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.521739
16	70249757	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	70249811	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	70249868	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	70249877	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	70249888	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	70249889	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	70249912	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	70372975	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	70372978	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.173913
6	70589188	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.2
6	70589226	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.818182
6	70589332	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.25
6	70589350	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.4
6	70589356	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.4
6	70589371	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	70589418	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	71702345	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.583333
10	72234373	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0444444
10	72234418	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.037037
10	72234877	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.113636
10	72234879	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.222222
10	72234934	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.297297
10	72234941	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.102564
10	72234949	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.219512
10	72234950	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.268293
10	72235004	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.3
10	72235009	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.05
10	72235070	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.4
10	72235076	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.235294
11	72286512	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.3
11	72287509	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.125
11	72288228	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.3
11	72289708	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.103448
11	72289709	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.172414
11	72290699	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	73056958	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	73057026	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.388889
4	73057035	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.15
4	73057182	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.481481
4	73057184	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.107143
4	73057209	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.257143
4	73057210	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.135135
4	73057247	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.125
4	73057264	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.62963
4	73057278	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.12
4	73057315	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	73057357	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.1
4	73057379	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0606061
4	73057380	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.212121
4	73057388	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.1
4	73057697	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.12
4	73057732	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.5
4	73057742	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	73057781	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.1
4	73057785	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.3125
4	73057807	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	73057824	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	73057834	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.454545
10	73249034	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.111111
10	73249039	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0410959
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.137097
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.260163
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0900901
10	73249086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0625
10	73249087	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0762712
10	73249089	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0258621
10	73249098	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0373832
10	73249115	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.046729
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.216667
10	73249190	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0373832
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.632653
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.269841
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	73249834	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	73249907	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.150943
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.144
10	73249963	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.113821
10	73249964	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0322581
10	73250018	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0232558
10	73250023	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.149254
10	73250026	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	73250043	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0375
10	73250060	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0925926
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.365854
10	73250096	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0416667
10	73250163	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.188679
10	73250259	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.075
10	73250329	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0851064
6	73424190	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.34375
6	73424334	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.12
6	73424352	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	73424884	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	73424950	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	73424951	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.2
6	73424991	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	73425031	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.138889
6	73425033	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.27027
6	73425036	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.514286
6	73425125	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
6	73516586	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0412371
6	73593820	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.25
6	73594290	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	74058069	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74058071	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.62963
14	74058083	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.269231
14	74058084	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.192308
14	74058138	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.192308
14	74058244	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	74058840	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	74059451	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	74059452	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	74060242	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
14	74060272	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
14	74060273	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.513514
14	74060281	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.171429
7	74231817	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0735294
7	74231857	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0298507
7	74231966	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
11	74455757	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.0980392
11	74455839	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.0571429
11	74455866	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.269841
11	74456245	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.266667
11	74456249	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.340426
11	74456275	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.519231
14	74735609	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.391304
14	74735669	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.352941
14	74735687	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.148148
14	74735696	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74735699	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.793103
14	74735709	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.72
14	74735772	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	74735828	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74735829	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.185185
14	74735841	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.352941
14	74735850	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.137931
14	74735966	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	74735995	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	74736002	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	74736031	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.428571
14	74736131	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
14	74736145	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	74736153	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.435897
14	74736154	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.282051
14	74736247	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
14	74736249	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
14	74736291	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.583333
14	74736292	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	74736297	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	75443923	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	75443941	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	75445412	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	75445424	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.296296
16	75445426	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.384615
16	75445433	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.344828
16	75445479	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	75445496	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.84
16	75445572	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.173913
16	75445576	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.44
16	75445586	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	75445919	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	75445933	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.268293
16	75445934	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	75445993	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.391304
16	75446009	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.52381
16	75446012	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	75446066	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	75446075	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.15
16	75446092	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	75446112	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.25
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.8
16	75599337	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	75889184	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	75889300	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0689655
17	75889326	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.1
17	75889853	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.128205
17	75889858	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.461538
17	75890131	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0851064
17	75890138	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0416667
4	75917554	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0447761
4	75917659	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0447761
4	75917660	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.030303
17	75942997	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	75943060	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	75943965	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	75943986	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.315789
17	75943987	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	75943996	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.578947
17	75944013	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.444444
17	75944039	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.545455
17	75944218	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.190476
17	75944226	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.952381
17	75944794	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.615385
17	75944807	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	75944808	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	75944836	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.416667
17	75944837	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.642857
17	75944851	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	75944868	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	75944878	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	75944918	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.3
17	75945027	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	76205039	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.217391
14	76205069	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.227273
14	76207066	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.4
14	76207235	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	76207236	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.357143
17	76779160	A->G	+	ENSG00000092931	MFSD11	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	77025649	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	77025667	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.388889
11	77025668	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.611111
11	77025680	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.826087
X	77827494	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0326087
X	77827502	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0824742
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.252525
X	77827518	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.038835
X	77827534	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.04
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.135417
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0784314
X	77827619	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0353982
X	77827621	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0825688
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.103774
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.126214
X	77827682	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0736842
X	77827686	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0430108
X	77827690	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0315789
X	77827712	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	77828020	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0674157
X	77828041	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	77828055	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0649351
X	77828077	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.118421
X	77828078	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.150685
X	77828117	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0406504
X	77828118	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0325203
X	77828120	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.277311
X	77828144	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0818182
X	77828147	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0775862
X	77828148	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.190083
X	77828155	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0737705
X	77828156	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.165289
X	77828157	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0672269
X	77828162	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.027027
X	77828173	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	77828175	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.348624
X	77828207	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0206186
X	77828226	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.20202
X	77828331	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.384615
X	77828349	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.039604
X	77828382	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	77828383	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.106383
X	77828394	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.451613
X	77828403	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
X	77828417	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.383721
X	77828418	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.534091
X	77828423	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0375
X	77828442	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0409836
X	77828458	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.037594
X	77828467	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0420168
X	77828484	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0559441
X	77828485	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0629371
X	77828491	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.027972
X	77828503	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0246914
X	77828504	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.168675
X	77828510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0379747
X	77828520	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.1
X	77828541	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0461538
X	77828545	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0583333
11	78068542	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.25
11	78068663	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.666667
11	78068673	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.2
11	78069027	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.263158
11	78069056	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	78069057	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	78069059	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	78069071	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.6
11	78069105	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	78069162	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	80522325	A->G	+	ENSG00000108219	TSPAN14	protein_coding	three_prime_utr	.	.	Alu	0.031746
5	80627470	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.06
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.125
5	80627513	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0377358
5	80627514	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.037037
5	80627515	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	80627541	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0392157
5	80627542	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	80627547	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0526316
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.148936
5	80627578	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	80627611	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	80627627	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	80627969	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	80628007	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	80628036	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.1
5	80628087	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.25
5	80628093	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.125
15	83005358	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	83005400	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	83005409	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.363636
15	83005413	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	83005485	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	84642202	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.153846
15	84642218	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.357143
15	84642228	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.3125
15	84642257	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.363636
15	84642271	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.230769
15	84642277	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.166667
X	85091020	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.727273
X	85091058	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	85091976	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.25
X	85091977	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	85319250	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	85319275	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.043956
2	85319328	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0402299
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.121387
2	85319342	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0502793
2	85319396	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0628272
2	85319449	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0262009
2	85549498	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	85549603	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	85610231	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.2
2	85610232	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.3
2	85610242	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	86024902	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	86024920	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	86025091	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	86025099	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.2
1	89183644	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	89183686	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	89183696	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	89183712	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	89183741	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	89183779	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	89183780	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
16	89563498	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	89563618	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	89634485	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.1
6	89634503	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.368421
6	89634852	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	89634862	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	89634886	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	89634921	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	89634987	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.380952
6	89636818	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	90385846	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	90385870	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	93366748	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	93366749	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	93448441	A->G	-	ENSG00000188938	FAM120AOS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	93735605	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	93735606	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	93735630	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.473684
11	94417249	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	94417250	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.5
11	94417258	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	94612873	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.3
2	96249515	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0487805
8	97726819	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	97726820	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.155556
8	97726932	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.028169
8	97726958	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0338983
8	97726980	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	97726981	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	97727244	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	97727245	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	97727366	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0631579
8	97727379	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.02
8	97727380	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0392157
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.161765
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.2
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.343284
8	97728683	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0277778
8	97728688	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.216216
8	97728689	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0606061
8	97728707	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.115385
8	97728712	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.151515
8	97728750	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.5
12	98548843	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.27027
12	98548865	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0208333
12	98548910	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.752212
12	98548917	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.262712
12	98548918	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.146552
12	98548920	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.218487
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.176829
12	98549030	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0314465
12	98549041	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0634921
12	98549042	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.114754
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.541985
12	98549053	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0314961
12	98549069	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0431034
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.830189
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.245283
12	98549126	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	98549233	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.282258
12	98549240	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0697674
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.991935
12	98549264	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0443038
12	98549305	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.045
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.565421
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.157658
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.25974
12	98549371	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0209059
12	98549384	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0254545
12	98549404	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0538244
12	98549423	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0404313
12	98549424	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0241935
12	98605857	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	98605908	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	98733533	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0681818
12	98733572	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
12	98733668	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.123077
12	98733669	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0461538
6	98873697	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.538462
6	98873710	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	99195826	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.135135
2	99195827	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.135135
2	99195848	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0731707
2	99195873	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.518519
2	99195951	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	99195961	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.046875
2	99195966	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.134328
2	99195984	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.372549
2	99195987	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0980392
2	99196001	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.22
2	99196002	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.148936
2	99196031	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	99196046	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0444444
2	99196076	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	99196324	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.152174
2	99196345	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	99196352	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.35
2	99196354	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.243243
2	99196380	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.558824
2	99196394	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.419355
2	99196401	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	99196430	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	99196434	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.772727
2	99196488	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.102041
2	99196494	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	99196505	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0408163
2	99196515	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.3
2	99196525	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.25641
2	99196540	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	99196557	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.434783
7	99493453	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.125
4	99881022	A->G	-	ENSG00000109270	LAMTOR3	protein_coding	three_prime_utr	.	.	Alu	0.0645161
10	100232437	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.238095
10	100232502	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.125
10	100232510	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.3
10	100232524	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.6
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	1
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.4
10	100232607	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
10	100232668	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.191489
10	100232677	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	100232926	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
10	100232927	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	100233026	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.344828
10	100233036	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.363636
10	100233048	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.09375
10	100233053	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.290323
10	100233091	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.190476
7	100399968	A->G	+	ENSG00000085514	PILRA	protein_coding	three_prime_utr	.	.	Alu	0.0560748
X	101009678	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	101009679	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	101009685	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	101010167	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0487805
X	101010296	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	101010300	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.2
X	101010329	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	101010355	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.411765
X	101010360	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	101010402	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	101010404	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	101091477	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.277778
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.2
7	101091531	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	101091576	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.125
7	101091593	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.1875
7	101091607	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.4375
7	101091612	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	101271386	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	101271398	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.3
2	101271399	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	101271421	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.08
2	101271425	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	101271520	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0638298
2	101271532	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	101271537	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.204545
2	101271546	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.139535
2	101271570	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	101271575	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	101823506	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.444444
3	101823511	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	101823564	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.151515
3	101823592	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.159091
3	101823666	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.114286
3	101823685	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	101823728	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.1
3	101823803	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.208333
3	101823926	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.1
3	101823993	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	101824543	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.09375
3	101824560	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	101824664	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.4
3	101824679	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	101824739	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.121212
3	101826913	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.12
3	101826954	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	102448761	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
7	102449354	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	102449860	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	102450004	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
7	102450050	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
7	102450991	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
10	102476282	A->G	+	ENSG00000138111	MFSD13A	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	102753838	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.047619
4	102753890	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.04
4	102753947	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0731707
14	105049680	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	105846161	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	105846893	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	106666050	A->G	+	ENSG00000130348	QRSL1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	106666058	A->G	+	ENSG00000130348	QRSL1	protein_coding	three_prime_utr	.	.	Alu	0.047619
6	108042691	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.888889
11	108365853	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	108365869	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	108365908	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.428571
11	108365909	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	108365950	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.125
11	108365978	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	108365979	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	108367011	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	108367230	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.4
2	108686065	A->G	+	ENSG00000169756	LIMS1	protein_coding	three_prime_utr	.	.	Alu	0.025
12	108786648	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	109463257	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	109464706	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.25
6	109464711	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	109464743	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	109851674	A->G	-	ENSG00000139433	GLTP	protein_coding	three_prime_utr	.	.	Alu	0.0352113
6	111267566	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.125
9	112684279	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.222222
9	112684284	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.115385
9	112684306	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.352941
9	112684353	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	112684431	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.545455
9	112684441	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.727273
9	112684445	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	112684466	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	112684467	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	112684470	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
9	112684500	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.08
9	112684505	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.608696
9	112684531	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.130435
9	112684549	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	112685199	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.384615
9	112685210	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	112686634	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	112686661	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.157895
9	112686664	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.2
9	112686770	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.666667
9	112686771	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.62963
5	115829866	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.148148
5	115829894	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.464286
5	115829935	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.434783
5	115830034	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.178571
5	115830790	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0263158
12	116714628	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.785714
12	116714631	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	116715123	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	116715180	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.263158
5	119394843	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.26087
X	119538639	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	119538678	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.5
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.647059
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.777778
X	119538717	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	119539275	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.357143
X	119539287	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.296296
X	119539288	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.148148
X	119539306	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.206897
X	119539349	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	119539365	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	119539368	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.176471
10	119573235	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.4
10	119573245	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	120437941	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0501931
X	120437993	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0343137
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0735294
X	120438106	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.021645
12	120460750	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.692308
12	120460751	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	120460839	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	120460842	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.25
12	120460855	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	120460858	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.26087
12	120460884	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	120460894	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	120460911	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.9375
12	120461140	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.5
12	120461175	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.125
12	120461195	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	120461196	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.346154
12	120461208	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.965517
12	120461226	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	120461261	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	120461272	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.862069
12	120461273	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	120461358	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.08
12	120461365	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.129032
12	121778420	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	122027179	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.242424
5	122027180	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.25
12	123410922	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.121212
12	123410995	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.1
12	123411016	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	123411103	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.185185
12	123411110	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	123411140	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	123411180	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.470588
12	123411181	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.294118
12	123411213	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123411216	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123411301	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	123411302	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	123412177	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	123412196	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.366667
12	123412239	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.375
12	123412280	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	123412306	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.12
12	123412337	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	123412340	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.238095
12	123412349	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	123412413	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.32
12	123412414	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.28
12	123412421	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.4
12	123412436	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.227273
12	123413113	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	123413239	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.238095
12	123661520	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.178571
12	123661530	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	123661547	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	123661548	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.605263
12	123661553	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.108108
12	123661590	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	123661766	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	123661768	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.4
12	123661770	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.103448
12	123661809	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.102564
12	123661824	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	123661849	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.219512
12	123661870	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	123662018	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	123662050	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.277778
X	123909158	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.2
X	123909266	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	123909293	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.411765
X	123909305	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.35
X	123910606	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	123910721	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	123911555	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123912452	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.208333
X	123912456	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.76
X	123912567	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	123912590	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.583333
X	123912908	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.2
X	123912922	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.3
X	123912929	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	123913015	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123913043	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123913198	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	123913296	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123913315	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	123913320	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123913323	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.571429
X	123913331	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123913411	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	123913420	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.26087
X	123913435	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	125026680	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	125026696	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	125027582	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	125029327	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.125
12	125029417	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	125029464	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	125029466	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	125656230	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	125656244	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.533333
11	125675961	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.2
11	125675988	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	125676007	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.125
11	125676008	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	125676034	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126625387	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.3
5	126625517	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	126625518	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	126625562	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	126625755	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126625763	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126625771	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.3
5	126625776	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126626118	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
2	127846011	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.2
4	128036572	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	128036585	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.125
4	128036916	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	128036930	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	128036931	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.363636
4	128036972	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.2
4	128037573	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	128037599	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	128191597	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.038835
2	128191604	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.026087
2	128192901	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	128192917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.642857
2	128192923	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.8
2	128192924	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.8
2	128193272	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	128193283	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.6
2	128193316	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	128193346	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.71875
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.645161
2	128193533	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.771429
2	128193535	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	128193549	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	128194192	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	128194346	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	128194396	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	128194406	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
2	128194447	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0428571
2	128194450	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	128194467	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	128194501	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	128194510	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	128194529	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	128194541	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0681818
2	128195125	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
9	128306811	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	128307922	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	128307926	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.470588
9	128309254	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	128309300	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.08
9	128309322	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	128502752	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	128502779	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	128502787	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128503014	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	128503108	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.08
7	128503235	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.1875
7	128503568	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.5
7	128503743	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	128504760	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.538462
5	131162200	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	131162260	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.130435
5	131201055	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	131201061	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131201062	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131201113	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	131201138	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	131201149	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	131201152	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	131201154	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.208333
5	131201175	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	131201193	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.217391
5	131201199	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	131201462	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.545455
5	131201527	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201530	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201540	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131201558	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	131201559	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	131201560	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	131201588	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131201599	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.875
5	131201639	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	131201664	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.695652
5	131201669	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	131201694	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.625
5	131201710	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.208333
5	131201838	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131201874	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.294118
5	131201912	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.210526
5	131202239	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	131202240	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	131202266	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.409091
5	131202275	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.227273
5	131202280	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1
5	131202304	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	131202373	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	131202374	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.789474
5	131202379	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.473684
5	131202383	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	131202387	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.210526
5	131202409	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.24
5	131202443	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131202444	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.833333
5	131202579	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.125
5	131202581	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	131202645	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.714286
5	131202651	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.388889
5	131202669	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	131203422	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.416667
5	131204142	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	131204153	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	131204168	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.217391
5	131204197	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	131204202	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.192308
5	131204218	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	132721318	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.617284
12	132721328	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.021978
12	132721348	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	132721356	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.44898
12	132721375	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0619469
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.146789
12	132721433	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0927835
12	132721434	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.040404
12	132721436	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0322581
12	132721441	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0206186
12	132721448	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.032967
12	132721467	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0985915
12	132721471	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0289855
12	132721473	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.028169
12	132721483	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.396552
12	132721535	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.485714
12	132721539	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.220779
12	132721689	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	132721717	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0759494
12	132721753	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.741935
12	132721754	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.245902
12	132721763	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.229508
12	132721773	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0350877
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.347826
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.365385
12	132721879	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	132722331	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.04
12	132722351	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0862069
12	132722416	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.05
12	132722417	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0322581
12	132722424	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.030303
12	132722430	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.197802
12	132769969	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.193548
12	132769978	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	132770000	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.25
12	132770042	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.291667
5	134402234	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0327869
5	134402261	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0461538
5	134402303	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0361446
5	134402304	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0238095
5	134402494	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0410959
5	134402579	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0961538
5	134402580	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.06
5	134829783	A->G	+	ENSG00000145833	DDX46	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	134900515	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.4
5	134900528	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.3
5	134900555	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	134900591	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	134900596	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.363636
9	134906027	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.25
9	134906059	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	134906064	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.352941
9	134906089	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	134906134	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.109091
9	134906135	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0363636
9	134906144	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
9	134906159	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0806452
9	134906168	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.483333
9	134906173	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.127273
9	134906178	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	134906200	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.75
9	134906214	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.305556
9	134906230	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.109589
9	134906232	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0410959
9	134906814	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.148148
9	134906827	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.266055
9	134906828	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.174312
9	134906849	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.031746
9	134906853	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.129032
9	134906866	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.192771
9	134906879	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
9	134906905	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.152941
9	134906908	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.106383
9	134906963	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
9	134906972	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0222222
9	134906996	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.169231
9	134907015	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	135676149	A->G	+	ENSG00000243317	STMP1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
4	139045647	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.115385
4	139045723	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.259259
3	141948848	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	145745244	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.1
1	145745275	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	145745346	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	145745370	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	145745394	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	145745519	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.588235
1	145745521	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.823529
1	145745550	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.352941
1	145745554	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.411765
1	145745595	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	145745596	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	145746059	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.5
1	145746102	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	145746104	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.291667
1	145746114	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.16
1	145746126	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	145746143	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	145746144	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	145746149	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.125
1	145921979	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.307692
1	145921980	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.230769
1	145921994	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	145921998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.142857
1	145922075	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.272727
1	145922076	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.416667
1	145923068	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.181818
1	145923078	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.2
1	145923094	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.583333
1	145923134	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.3
1	145923163	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.583333
1	145923202	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.1
1	145925494	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.0434783
5	146113339	A->G	-	ENSG00000133706	LARS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	149591145	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	149591241	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.097561
6	149591242	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
6	149724613	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	149724614	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	149724619	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	149724620	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.636364
6	149724862	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.8
6	149725201	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.16129
6	149725204	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.233333
6	149725213	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.642857
6	149725215	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	149725276	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.125
6	149725279	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.125
6	149725296	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	149725299	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	149725335	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	149725348	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.304348
6	149725349	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.291667
6	149725359	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.52
6	149725409	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.5
6	149725423	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.8
6	149725426	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	149726240	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0697674
6	149726282	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0789474
6	149726294	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0769231
5	149983651	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.416667
5	149983655	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	149983656	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.545455
5	149983710	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	150308756	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.4
1	150308757	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150621411	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150621412	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.238095
1	150621414	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.25
1	150731109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0261194
1	150731131	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0454545
1	150731136	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.20297
1	150731137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.665049
1	150731143	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.137931
1	150731144	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0295567
1	150731153	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0841121
1	150731158	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.205263
1	150731171	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.141104
1	150731185	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.137931
1	150731196	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.151515
1	150731200	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.238095
1	150731203	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0762712
1	150731216	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.121212
1	150731220	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0390625
1	150731221	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.449612
1	150731222	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.44697
1	150731225	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0584416
1	150731231	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	150731239	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150731240	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0816327
1	150731244	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	150731266	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	150731269	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	150731270	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0410256
1	150731276	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.429224
1	150731279	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0307018
1	150731288	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.168675
1	150731301	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0273973
1	150731305	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.110714
1	150731306	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0319149
1	150731311	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.579606
1	150731326	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0354839
1	150731336	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.136667
1	150731362	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0859539
1	150731374	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.647321
1	150731384	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.118674
1	150731386	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0741379
1	150731936	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.128613
1	150731937	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.443329
1	150731942	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.152516
1	150731972	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0504854
1	150732000	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.335616
1	150732005	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.140244
1	150732007	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.229299
1	150732010	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.208333
1	150732024	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0381166
1	150732072	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0550622
1	150732092	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0630798
1	150732109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.204918
1	150732111	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.154158
1	150732129	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.108148
1	150732137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.205163
1	150732157	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.598716
1	150732177	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.165882
1	150732178	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.261468
1	150732183	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.081448
1	150732184	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.073991
1	150732701	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0259649
1	150732740	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0425155
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0800801
1	150732767	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0522814
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150732802	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.121429
1	150732810	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0729872
1	150732829	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0325444
1	150732856	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0475146
1	150732860	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0308404
1	150732861	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0292722
1	150732881	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0215883
1	151123394	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
5	151181355	A->G	-	ENSG00000198624	CCDC69	protein_coding	three_prime_utr	.	.	Alu	0.0235294
5	151268183	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.263514
5	151268335	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0338028
5	151268338	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.024735
5	151268414	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0286976
5	151268415	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0221729
5	151268432	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0301075
4	152622854	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.12
4	152622866	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.12
X	154011217	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0261438
X	154011236	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0234375
1	155881822	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.04
1	155881829	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0576923
3	155943044	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.25
3	155943084	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	155943110	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.533333
3	155943111	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.4
3	155943172	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.2
3	156540416	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.7
3	156540438	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0566038
3	156540441	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.25
3	156540447	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.102041
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.925926
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.64
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.636364
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.24
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.202899
3	156541528	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.288889
3	156541552	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0851064
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.35
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.274194
3	156541607	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.045977
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.643478
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.543103
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
7	156971486	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.583333
7	156971520	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	156972800	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	159679849	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0235849
6	159679850	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0287081
6	159680691	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0250696
6	159680701	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0347222
1	160996511	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.038961
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.482143
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.581818
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.425926
1	160996583	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.793103
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	160998066	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.4
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	160998106	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.3125
1	160998148	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.18
4	165075383	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	165077490	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.15
4	165078036	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	165078037	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	165078928	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	165078996	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	168244389	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0333333
1	168244413	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0277778
1	168244441	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	168244453	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.020202
1	168249256	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0652174
1	168249284	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.127273
1	168249305	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	168249336	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0461538
1	168251048	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.16
1	168251094	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	168251169	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	168251225	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.028169
1	168251237	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	168251251	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0983607
2	171323430	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	175528000	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.2
4	176331637	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0232558
4	176331728	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0275862
1	179073562	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	179073566	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	179074957	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	179074965	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	179074970	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.15
1	179074975	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.15
1	179101511	A->G	-	ENSG00000143322	ABL2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179357453	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.25
1	179357773	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.809524
1	179357787	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	179357804	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.16
3	179397767	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.144444
3	179397778	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0253165
3	179397783	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.1
3	179397789	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0333333
3	179397833	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	179397839	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.766667
3	179397996	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.192308
3	179398001	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.730769
3	179398002	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.592593
3	179398008	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.225806
3	179398010	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	179398024	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.314286
3	179398258	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.583333
3	179398270	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.714286
3	179398280	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.928571
3	179398286	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	179399245	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.195652
3	179399314	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	179399340	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.145833
3	179399367	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.119048
3	179399376	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.129032
3	179399445	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0333333
3	179399454	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0697674
3	179399478	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.06
1	184791989	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	184791991	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.2
1	184792028	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.1
1	184792045	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.1
1	184792054	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.258065
1	184792137	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.125
1	184792140	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.631579
1	184792178	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.375
1	184792186	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	184792214	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	184792216	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.3
1	184792227	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	184793326	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	184793338	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.179487
1	184793351	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	184793353	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	184793364	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	184793373	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.16
1	184793390	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	184793447	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.346154
1	184793456	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.44
1	184793493	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	184793542	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	196352409	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.147059
3	196352412	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	196352418	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.212121
3	196352422	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.2
3	196352434	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	196352512	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.466667
3	196352518	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	196352519	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.5
3	196352541	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.545455
3	196352735	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0487805
3	196352737	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.365854
3	196352749	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.394737
3	196352750	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.4
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	197884875	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	197884887	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.1
2	200909618	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.5
2	200910051	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.526316
2	200910052	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	200977594	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.148148
2	200977600	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.75
2	200977668	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	200977678	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	200977685	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	200977688	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.1
2	200977694	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.347826
2	200977703	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	200977711	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.5625
2	200977756	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.555556
2	200977769	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.533333
2	200977821	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	200977838	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	200977846	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.7
2	200978572	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.6875
2	200978573	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.2
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.421053
2	200978741	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.5
2	200978742	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	200978747	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.846154
2	200978748	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.916667
2	201164004	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	201164010	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	201164011	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0597015
2	201164056	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0277778
2	201164088	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	201164105	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0273973
2	201164109	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0821918
2	201164112	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0277778
2	201164138	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0422535
2	201164144	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.13253
2	201164154	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	201165371	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.225
2	201165388	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	201167246	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	201217945	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	201218007	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	201218013	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.2
2	201218039	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.125
2	201218334	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	201218512	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	201219050	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0652174
2	201219149	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	201219150	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.35
2	201219176	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.236842
2	201219195	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.204545
2	202876819	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	202879513	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	202879518	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.25
2	202879552	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	202879827	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	202879858	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	202879873	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	202879880	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	202879906	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	202879919	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	202879921	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	202879935	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	202880313	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	202880331	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.185185
2	202880382	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	202880400	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297313	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	203297383	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	203297495	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	203297519	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.35
2	203297722	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	203297792	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	203297865	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.375
2	203297874	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	203297878	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	203297891	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	203297930	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	203297942	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	205769566	A->G	-	ENSG00000117280	RAB29	protein_coding	three_prime_utr	.	.	Alu	0.0350877
2	206117111	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.277778
2	206117112	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.444444
2	206117132	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	206117142	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	206117150	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	206117172	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	206118574	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	206121522	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	206122202	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.37037
2	206122212	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.36
2	206122217	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	206122221	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	206122225	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	206122248	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	206122254	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	206122256	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	206122264	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	206122372	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	206122384	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	206122385	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.24
2	206122412	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	206122418	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.411765
2	206122437	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	206122472	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	206122504	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.75
2	206122505	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	206122507	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	206122529	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	206122585	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	206122765	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	206122808	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	206122837	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.347826
2	206122875	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	206122881	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	206122903	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	206122908	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	206122913	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	206122928	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	206123001	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.35
2	206123007	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	206123008	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	206123014	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	207754653	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.8
2	207754677	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	207754690	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	207754697	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	207754737	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	207754738	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	207754755	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.9
2	207754767	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	207754938	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	207754945	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	207754951	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	207754975	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	207755018	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.916667
2	207755025	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.857143
2	207755051	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	207755065	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	207755282	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	207755398	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.159091
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.155556
2	216501817	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0638298
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	216501847	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	216501875	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	216501903	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	216501951	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	216502063	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	216502071	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	216502072	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	216502098	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.15625
2	216502162	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.05
2	216502174	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.108108
2	216502196	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.28
2	216502207	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	216502235	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.121951
2	216502255	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0576923
1	220057919	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	220057921	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.896552
1	220057933	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.83871
1	220057934	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.225806
1	220057988	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	1
1	220057996	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	220058005	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.736842
1	220058010	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.315789
1	220058029	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	220058113	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	220058119	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	220058142	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.727273
1	220058145	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.833333
1	220058604	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	220058617	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	1
1	220058621	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	220058629	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	220058640	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.15
1	220058646	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	220058669	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	220058711	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	220058796	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	220058801	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.615385
1	220058802	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.714286
1	225786972	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.121212
1	225786982	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.084507
1	225983639	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0818182
1	225983640	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.027027
1	225983676	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0990099
1	225983677	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	225983699	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	225984164	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	233205636	A->G	+	ENSG00000168918	INPP5D	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	149887298	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.151515
1	149887323	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.0769231
1	149887567	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.124444
1	149887568	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.0733945
1	149887575	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.457711
1	149887584	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.723502
1	149887591	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.0585106
1	149887592	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.430939
1	149887628	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.0545455
1	149887647	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.56
17	46337318	A->G	-	ENSG00000228696	ARL17B	protein_coding	exon	.	.	Alu	0.428571
16	4483712	A->G	+	ENSG00000153406	NMRAL1	protein_coding	five_prime_utr	.	.	Alu	0.125
17	5487674	A->G	+	ENSG00000167842	MIS12	protein_coding	five_prime_utr	.	.	Alu	0.2
1	23959998	A->G	+	ENSG00000189266	PNRC2	protein_coding	five_prime_utr	.	.	Alu	0.130435
2	53787169	A->G	+	ENSG00000068912	ERLEC1	protein_coding	five_prime_utr	.	.	Alu	0.2
3	17562130	A->G	-	ENSG00000131374	TBC1D5	protein_coding	five_prime_utr	.	.	Alu	0.0416667
3	48924814	A->G	+	ENSG00000177479	ARIH2	protein_coding	five_prime_utr	.	.	Alu	0.0322581
3	48924826	A->G	+	ENSG00000177479	ARIH2	protein_coding	five_prime_utr	.	.	Alu	0.0277778
6	26172371	A->G	+	ENSG00000283064	AL353759.1	antisense	five_prime_utr	.	.	Alu	0.0645161
6	26172407	A->G	+	ENSG00000283064	AL353759.1	antisense	five_prime_utr	.	.	Alu	0.0869565
7	66740055	A->G	-	ENSG00000272831	AC027644.3	antisense	five_prime_utr	.	.	Alu	0.025641
10	16437413	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.130435
10	16437438	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.111111
10	16437439	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.111111
10	72220249	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0326087
11	62840111	A->G	-	ENSG00000133316	WDR74	protein_coding	five_prime_utr	.	.	Alu	0.125
11	72049466	A->G	-	ENSG00000137497	NUMA1	protein_coding	five_prime_utr	.	.	Alu	0.1
12	31074082	A->G	+	ENSG00000013573	DDX11	protein_coding	five_prime_utr	.	.	Alu	0.461538
12	68624534	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.05
14	55601867	A->G	+	ENSG00000126777	KTN1	protein_coding	five_prime_utr	.	.	Alu	0.04
16	18900010	A->G	-	ENSG00000157106	SMG1	protein_coding	five_prime_utr	.	.	Alu	0.294118
16	57174211	A->G	-	ENSG00000172775	FAM192A	protein_coding	five_prime_utr	.	.	Alu	0.117647
16	57174218	A->G	-	ENSG00000172775	FAM192A	protein_coding	five_prime_utr	.	.	Alu	0.176471
16	70114916	A->G	+	ENSG00000090857	PDPR	protein_coding	five_prime_utr	.	.	Alu	0.294118
17	28672802	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.117647
17	28672803	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.1875
17	28672805	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.214286
19	16077972	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.181818
19	16081465	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.230769
19	53445081	A->G	+	ENSG00000160336	ZNF761	protein_coding	five_prime_utr	.	.	Alu	0.166667
2	232724601	A->G	+	ENSG00000204120	GIGYF2	protein_coding	five_prime_utr	.	.	Alu	0.0869565
4	189941998	A->G	+	ENSG00000109536	FRG1	protein_coding	five_prime_utr	.	.	Alu	0.4375
5	163437663	A->G	+	ENSG00000113328	CCNG1	protein_coding	five_prime_utr	.	.	Alu	0.779661
12	118261545	A->G	-	ENSG00000135090	TAOK3	protein_coding	five_prime_utr	.	.	Alu	0.0526316
14	106810905	A->G	-	ENSG00000224650	IGHV3-74	IG_V_gene	five_prime_utr	.	.	Alu	0.1
GL000219.1	57733	A->G	-	ENSG00000273748	AL592183.1	protein_coding	Intergenic	.	.	Alu	1
GL000219.1	58514	A->G	-	ENSG00000273748	AL592183.1	protein_coding	Intergenic	.	.	Alu	1
GL000219.1	58871	A->G	-	ENSG00000273748	AL592183.1	protein_coding	Intergenic	.	.	Alu	1
GL000219.1	85486	A->G	-	.	.	.	Intergenic	.	.	Alu	1
GL000219.1	99159	A->G	-	.	.	.	Intergenic	.	.	Alu	1
KI270713.1	21693	A->G	-	.	.	.	Intergenic	.	.	Alu	0.194444
MT	16356	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	16362	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	16519	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	204	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	249	A->G	+	.	.	.	Intergenic	.	.	Alu	1
MT	263	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	10770982	A->G	-	ENSG00000101871	MID1	protein_coding	Intergenic	.	.	Alu	1
X	109724812	A->G	-	ENSG00000068366	ACSL4	protein_coding	Intergenic	.	.	Alu	0.153846
X	109725345	A->G	-	ENSG00000068366	ACSL4	protein_coding	Intergenic	.	.	Alu	0.384615
X	109726967	A->G	-	ENSG00000068366	ACSL4	protein_coding	Intergenic	.	.	Alu	0.166667
X	120434912	A->G	-	ENSG00000005893	LAMP2	protein_coding	Intergenic	.	.	Alu	0.272727
X	1208053	A->G	-	ENSG00000205755	CRLF2	protein_coding	Intergenic	.	.	Alu	1
X	123974744	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.2
X	123974745	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.2
X	1311237	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
X	1311626	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	1311631	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	1311635	A->G	+	.	.	.	Intergenic	.	.	Alu	0.7
X	1311643	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
X	1311715	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
X	1312200	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	1312201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	1322905	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
X	1504641	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	0.5
X	1504707	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	1
X	15691324	A->G	+	ENSG00000186312	CA5BP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
X	15692489	A->G	+	ENSG00000186312	CA5BP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
X	15759520	A->G	+	ENSG00000169239	CA5B	protein_coding	Intergenic	.	.	Alu	0.333333
X	15836859	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.0952381
X	15837012	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.294118
X	15839609	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.0588235
X	15839734	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.0666667
X	15839760	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.0869565
X	15839768	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.12
X	16737130	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.5
X	16737132	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.2
X	16737264	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.166667
X	16737300	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.25
X	24180511	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.333333
X	24180617	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.416667
X	24180621	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.428571
X	24180622	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.428571
X	2491447	A->G	-	ENSG00000169084	DHRSX	protein_coding	Intergenic	.	.	Alu	1
X	2493343	A->G	-	ENSG00000169084	DHRSX	protein_coding	Intergenic	.	.	Alu	0.7
X	2693204	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2694487	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.111111
X	2694538	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.243902
X	2694543	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0526316
X	2694544	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.315789
X	2694606	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.117647
X	2694630	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.176471
X	2694632	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.111111
X	2694633	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.222222
X	2695370	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0645161
X	2695479	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.1
X	2695791	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.142857
X	2695799	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.117647
X	2695856	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0952381
X	2696041	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2696178	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2696226	A->G	-	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2697482	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2706426	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2710088	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.636364
X	2710950	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2718041	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.647059
X	30654527	A->G	+	ENSG00000198814	GK	protein_coding	Intergenic	.	.	Alu	0.105263
X	30654528	A->G	+	ENSG00000198814	GK	protein_coding	Intergenic	.	.	Alu	0.1
X	30654533	A->G	+	ENSG00000198814	GK	protein_coding	Intergenic	.	.	Alu	0.0952381
X	38309745	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.272727
X	38310082	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.166667
X	38310158	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.0789474
X	38310228	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.441176
X	38310230	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.0909091
X	38310237	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.0833333
X	38324222	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.2
X	38324261	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.230769
X	38324372	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.2
X	38324373	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.130435
X	38324913	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.428571
X	38325046	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.363636
X	38325048	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.2
X	38325058	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.181818
X	39786962	A->G	-	.	.	.	Intergenic	.	.	Alu	1
X	40582263	A->G	+	ENSG00000182220	ATP6AP2	protein_coding	Intergenic	.	.	Alu	0.230769
X	40582301	A->G	+	ENSG00000182220	ATP6AP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	41164146	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.181818
X	44897681	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	54561640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.224138
X	54561910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0545455
X	54562342	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
X	54563297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.875
X	54563341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	54563379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.101266
X	54563714	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
X	54563738	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
X	54564569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54565603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	54565924	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54565925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	54566843	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54566848	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
X	65685621	A->G	+	ENSG00000147065	MSN	protein_coding	Intergenic	.	.	Alu	0.153846
X	71293812	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.157895
X	71293861	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.1
X	71293873	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.176471
X	71296372	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.181818
X	71365629	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	71365633	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	74261766	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74276465	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74276491	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74276500	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74276501	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.272727
X	74276633	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.6
X	74579656	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	74580707	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	74580719	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	78132268	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.142857
X	96688817	A->G	+	ENSG00000147202	DIAPH2	protein_coding	Intergenic	.	.	Alu	0.363636
X	96688871	A->G	+	ENSG00000147202	DIAPH2	protein_coding	Intergenic	.	.	Alu	0.181818
Y	13393113	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.1875
Y	13467179	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.166667
Y	13468147	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.2
Y	13468189	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.363636
Y	13468617	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.230769
Y	13469373	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.2
Y	13469428	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.133333
Y	13469451	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.176471
Y	13474787	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.0909091
Y	13475904	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.114286
Y	18928194	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.363636
Y	18928216	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.2
Y	19072938	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.2
Y	19072940	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.454545
Y	19076368	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.2
Y	19076374	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.272727
Y	2938647	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.25
Y	3013466	A->G	+	ENSG00000231535	LINC00278	lincRNA	Intergenic	.	.	Alu	0.153846
Y	7330615	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.136364
Y	7330616	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
Y	7330634	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
Y	7331365	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
4	775596	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.157895
4	775662	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.166667
4	776507	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.153846
4	776633	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.230769
4	776634	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.142857
4	777551	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.0465116
4	777605	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.0645161
4	778739	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.219512
4	778740	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.166667
4	778780	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.147059
4	779509	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.458333
4	779544	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.128205
9	219391	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.133333
9	219392	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.125
9	219718	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.1
9	219721	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.0952381
9	222116	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.1
10	916547	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.181818
10	916571	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.333333
10	916608	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.117647
10	916612	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.416667
10	916795	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.818182
10	916799	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.285714
10	916857	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.111111
10	916865	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.166667
10	916870	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.157895
10	916872	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.157895
10	916873	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.315789
10	916917	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.285714
10	916930	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.1875
10	916957	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.3125
10	916977	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.266667
10	928696	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.133333
10	928764	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.15
10	928847	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.142857
10	929415	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.409091
10	929429	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.2
10	929432	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.55
10	929447	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.176471
10	929473	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.307692
10	929538	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0731707
12	378299	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.2
12	380071	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.230769
12	380146	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.166667
12	380156	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.153846
12	380647	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.2
12	381899	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.230769
12	383339	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.3
19	863866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
1	1397089	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.2
1	1765794	A->G	-	ENSG00000008130	NADK	protein_coding	Intergenic	.	.	Alu	0.4
1	1767981	A->G	-	ENSG00000008130	NADK	protein_coding	Intergenic	.	.	Alu	0.181818
1	1768320	A->G	-	ENSG00000008130	NADK	protein_coding	Intergenic	.	.	Alu	0.166667
1	1772331	A->G	-	ENSG00000008130	NADK	protein_coding	Intergenic	.	.	Alu	0.2
1	1772528	A->G	-	ENSG00000008130	NADK	protein_coding	Intergenic	.	.	Alu	0.272727
1	1776956	A->G	-	ENSG00000008130	NADK	protein_coding	Intergenic	.	.	Alu	0.153846
1	9236046	A->G	+	ENSG00000049239	H6PD	protein_coding	Intergenic	.	.	Alu	0.2
1	9566139	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.2
1	9566168	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.166667
1	9566178	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.25
1	9566180	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.153846
1	9926828	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.109091
1	9928149	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.153846
1	9928655	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.047619
1	9928827	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.111111
2	9507895	A->G	-	ENSG00000239300	AC080162.1	antisense	Intergenic	.	.	Alu	0.117647
2	9516365	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.5
2	9518948	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.111111
2	9523905	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.0625
2	9524290	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.375
2	9524291	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.375
2	9531034	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.153846
2	9532711	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3
2	9532997	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.230769
2	9533077	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3
2	9541871	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.142857
2	9541873	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.133333
2	9542296	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.117647
2	9542756	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.117647
2	9542800	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.214286
2	9542809	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.285714
2	9542887	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.153846
2	9542889	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.142857
2	9542890	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.125
2	9542973	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9542979	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.272727
2	9549128	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.153846
2	9549208	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9549247	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.214286
2	9549308	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9549558	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.105263
2	9549620	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.25
2	9549678	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.214286
2	9549714	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.153846
2	9549715	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.142857
2	9550583	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9550606	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.125
2	9550638	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.133333
2	9550648	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.285714
2	9550649	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.230769
2	9550718	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.4
2	9550813	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9550992	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3125
2	9550993	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.1875
2	9550999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.4375
2	9551006	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.4
2	9553417	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.0606061
2	9624881	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.181818
2	9625162	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.1875
2	9625210	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.533333
2	9935892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	5123943	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0943396
3	5123960	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0344828
3	5123974	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0298507
3	5124082	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0377358
3	5124131	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0444444
3	5124535	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0434783
3	5125807	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0333333
3	5129275	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.111111
3	5129763	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0769231
3	5129775	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0625
3	5129783	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0606061
3	5160988	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.181818
3	9798342	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.105263
3	9798359	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.111111
4	3517112	A->G	-	ENSG00000163956	LRPAP1	protein_coding	Intergenic	.	.	Alu	0.3
4	6789769	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.272727
4	6789789	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.181818
5	6630509	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.125
6	3069756	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.6
6	3069757	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.6
6	4035847	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.2
6	4059739	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.125
6	4821686	A->G	+	ENSG00000153046	CDYL	protein_coding	Intergenic	.	.	Alu	0.142857
6	7120369	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
6	7177673	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
7	1535006	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.181818
7	1535464	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.307692
7	2536100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
7	2537358	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
7	2537381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
7	2537385	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
7	2779458	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.2
7	2843590	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.153846
7	2843595	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.3
7	4786810	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.266667
7	4786835	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.153846
7	4786840	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.5
7	5326517	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
7	5326524	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.3
7	5848187	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	6379478	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.2
7	6397738	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.125
7	6731114	A->G	+	ENSG00000187953	PMS2CL	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
8	1774920	A->G	+	ENSG00000182372	CLN8	protein_coding	Intergenic	.	.	Alu	0.0740741
8	6872154	A->G	-	ENSG00000164825	DEFB1	protein_coding	Intergenic	.	.	Alu	0.307692
9	3487102	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.166667
9	3501995	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.133333
9	3502009	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.117647
9	3502062	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.545455
9	3502196	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.214286
9	3519994	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.105263
9	3520048	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.227273
9	3520058	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.318182
9	3520060	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	3520064	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.55
9	3520107	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.105263
9	3520744	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.12
9	3520752	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.1
9	3520754	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.285714
9	3520813	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.416667
9	3520881	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.0588235
9	3520945	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.0416667
10	6206927	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.142857
10	6220331	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.0645161
11	3722704	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3722731	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3791385	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3791422	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3793883	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1875
11	3794739	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.125
11	3794864	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.153846
11	3795222	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	9196707	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9196716	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9197478	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.111111
11	9197529	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9197532	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9230796	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9248018	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9248191	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.176471
11	9248199	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9248210	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.125
11	9252419	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.125
11	9253033	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.210526
11	9253076	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.157895
11	9253125	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.117647
11	9253139	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.428571
11	9253144	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9254202	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9254204	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9254927	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9257268	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9257271	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.3
11	9259784	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.1875
11	9259785	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.1875
11	9261527	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.131579
11	9261532	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0810811
11	9261535	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.108108
11	9261612	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.105263
11	9263310	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9582708	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.2
11	9583083	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.214286
11	9583190	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.153846
11	9584333	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.181818
11	9584335	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.272727
12	1692900	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.230769
12	1695115	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.2
12	1695116	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.3
12	1698475	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.166667
12	1701294	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.2
12	1701356	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.363636
12	1701962	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.272727
12	1701963	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.181818
12	1703527	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.166667
12	6332644	A->G	-	ENSG00000067182	TNFRSF1A	protein_coding	Intergenic	.	.	Alu	0.454545
12	7724715	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
12	7724937	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
12	7724978	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
12	7725429	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	7725480	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
12	7726107	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
12	7726146	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
12	7726208	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
12	7726238	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
12	7726243	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
12	7726246	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
12	7726274	A->G	-	.	.	.	Intergenic	.	.	Alu	0.347826
12	7726703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
12	7726961	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
12	7727357	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
12	7728216	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
12	7728218	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
12	7728227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
12	7728346	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	7728740	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
12	7728745	A->G	-	.	.	.	Intergenic	.	.	Alu	0.208333
12	7728761	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
12	7728767	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
12	7728769	A->G	-	.	.	.	Intergenic	.	.	Alu	0.148148
12	7923301	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.142857
12	7923451	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.1
12	7923503	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.1
12	7923877	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0526316
12	7932245	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0833333
12	7934798	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.310345
12	7935631	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.307692
12	8064913	A->G	-	ENSG00000171860	C3AR1	protein_coding	Intergenic	.	.	Alu	0.142857
12	8942630	A->G	-	ENSG00000003056	M6PR	protein_coding	Intergenic	.	.	Alu	0.454545
12	9649312	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intergenic	.	.	Alu	0.611111
12	9658633	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.166667
12	9658655	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.272727
12	9658712	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.2
12	9662186	A->G	+	.	.	.	Intergenic	.	.	Alu	1
12	9857800	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.411765
12	9857816	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.25
12	9857827	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.130435
12	9857873	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.103448
12	9857937	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.588235
12	9857938	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.473684
12	9858830	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0697674
12	9858949	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.243902
12	9858964	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.25641
12	9858984	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0652174
12	9859038	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	9859053	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0882353
16	1936439	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
16	1936683	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	1936697	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	1936700	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
16	1937518	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
16	3240640	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
16	3240680	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
16	3240681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
16	3240728	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
16	3240788	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	3240874	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
16	3241581	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0612245
16	3241594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.155556
16	3241603	A->G	-	.	.	.	Intergenic	.	.	Alu	0.244444
16	3241610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.097561
16	3241614	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0526316
16	3241615	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0789474
16	3241638	A->G	-	.	.	.	Intergenic	.	.	Alu	0.205128
16	3241684	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0789474
16	3241687	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
16	3241688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
16	3241690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
16	3241703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
16	3241704	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
16	3241705	A->G	-	.	.	.	Intergenic	.	.	Alu	0.205882
16	3241706	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
16	3241723	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
16	3241736	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
16	3241741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
16	3241759	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
16	3241760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
16	3241781	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
16	3241782	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0416667
16	3241788	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0535714
16	3241800	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
16	3460412	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.181818
16	3460481	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.153846
16	3864553	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.153846
16	4631057	A->G	+	ENSG00000102858	MGRN1	protein_coding	Intergenic	.	.	Alu	0.3
16	4843387	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4855413	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.2
16	8918024	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.142857
16	8933362	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.636364
16	8953019	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.181818
16	9097381	A->G	+	ENSG00000182831	C16orf72	protein_coding	Intergenic	.	.	Alu	0.117647
17	1358706	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.3
17	1358708	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.8
17	1360683	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.181818
17	1360684	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.181818
17	1384700	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.214286
17	1453046	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.157895
17	1453051	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.1875
17	1578748	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.2
17	1578800	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	1
17	1578801	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.4
17	2596830	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2597611	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2598061	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2608651	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	5487377	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.333333
17	7120624	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
17	7120669	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
17	7120678	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
17	8907303	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.2
17	8943226	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0952381
17	8943239	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.15
17	8943370	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.142857
17	8943374	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.285714
17	8950574	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0666667
17	8963115	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.04
17	8963118	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0377358
17	8963630	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0454545
17	8963658	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.112903
17	8963661	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0545455
17	8964134	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.025641
17	8964161	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0294118
17	8964235	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0289855
17	9971443	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.2
18	2708515	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.181818
18	2708638	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.4
18	2850486	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.181818
18	2850518	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.1
18	2851189	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.115385
18	2852658	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0714286
18	2852699	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0769231
18	2854538	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0967742
18	2854565	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.12
18	2854611	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.111111
18	2892921	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.3
18	2896707	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.272727
18	2896928	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.272727
18	8614769	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.2
18	9113030	A->G	+	ENSG00000263847	AP005899.1	antisense	Intergenic	.	.	Alu	0.307692
18	9143479	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.133333
18	9143480	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.133333
18	9143600	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.133333
18	9143672	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9176391	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.2
18	9198730	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.421053
18	9198733	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.222222
18	9198792	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.08
18	9198798	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.35
18	9199054	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.153846
18	9199060	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.166667
18	9199064	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9932929	A->G	+	ENSG00000101558	VAPA	protein_coding	Intergenic	.	.	Alu	0.142857
18	9932993	A->G	+	ENSG00000101558	VAPA	protein_coding	Intergenic	.	.	Alu	0.166667
18	9933026	A->G	+	ENSG00000101558	VAPA	protein_coding	Intergenic	.	.	Alu	0.24
18	9933671	A->G	+	ENSG00000101558	VAPA	protein_coding	Intergenic	.	.	Alu	0.5
18	9933735	A->G	+	ENSG00000101558	VAPA	protein_coding	Intergenic	.	.	Alu	0.2
18	9933738	A->G	+	ENSG00000101558	VAPA	protein_coding	Intergenic	.	.	Alu	0.133333
19	1078526	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.461538
19	1458582	A->G	-	ENSG00000115266	APC2	protein_coding	Intergenic	.	.	Alu	0.25
19	2078063	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.272727
19	2168230	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.307692
19	2168235	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.142857
19	2168285	A->G	-	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.526316
19	2168286	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.166667
19	2168815	A->G	-	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.0731707
19	2168843	A->G	-	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.0526316
19	2170054	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.111111
19	2171056	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.2
19	2174057	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.117647
19	2174432	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.3
19	2293991	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	2293995	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1875
19	2294031	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.153846
19	3542755	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.2
19	3758531	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.2
19	3759153	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.636364
19	3759166	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.153846
19	3759177	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.333333
19	4915512	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.238095
19	4915626	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.25
19	4915627	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.166667
19	4915658	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.2
19	4916075	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0645161
19	4916182	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.08
19	4916184	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.130435
19	4916190	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.277778
19	4916194	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.111111
19	4916272	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.153846
19	5596615	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.181818
19	5596622	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.181818
19	5629066	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.230769
19	5710629	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.2
19	6080120	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.4
19	6082255	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.3
19	6082627	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.142857
19	6082629	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.181818
19	6083111	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.166667
19	6085970	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.181818
19	6097802	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.125
19	6104679	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.210526
19	6537121	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	6583651	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.230769
19	6583727	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.111111
19	6583753	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.117647
19	6583760	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.133333
19	6583930	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.2
19	6584385	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.4
19	6584615	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.388889
19	6584750	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.7
19	6584783	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.105263
19	6584798	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.105263
19	6585054	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.2
19	6585111	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.08
19	6585125	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.1
19	6585410	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.105263
19	6585460	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.15
19	6585560	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.0869565
19	6585561	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.130435
19	6585588	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.142857
19	6585614	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.105263
19	6585615	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.105263
19	6585708	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.0909091
19	6585710	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.0909091
19	6585772	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.214286
19	6585786	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.111111
19	6585812	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.105263
19	6585813	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.105263
19	6585839	A->G	-	ENSG00000125726	CD70	protein_coding	Intergenic	.	.	Alu	0.142857
19	6904674	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.2
19	6904713	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.4
19	6905470	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.2
19	6905492	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.818182
19	6905514	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.428571
19	6905533	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.111111
19	6905536	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.941176
19	6905550	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.785714
19	6905553	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.1875
19	6905563	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.266667
19	6905613	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.166667
19	8518047	A->G	-	.	.	.	Intergenic	.	.	Alu	0.421053
19	8518052	A->G	-	.	.	.	Intergenic	.	.	Alu	0.227273
19	8518078	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
19	8518114	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
19	8540475	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.772727
19	8540538	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.2
19	8540907	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.111111
19	8541086	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.117647
19	8541122	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.125
19	8541622	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.4
19	8541624	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.3
19	8541625	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.5
19	8541702	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.538462
19	8572939	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.363636
20	1484287	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.416667
20	1529488	A->G	-	ENSG00000242324	AL049634.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
20	1532935	A->G	-	ENSG00000242324	AL049634.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0882353
20	1532970	A->G	-	ENSG00000242324	AL049634.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0769231
20	1533042	A->G	-	ENSG00000242324	AL049634.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.05
20	1902474	A->G	+	ENSG00000198053	SIRPA	protein_coding	Intergenic	.	.	Alu	0.294118
20	1902475	A->G	+	ENSG00000198053	SIRPA	protein_coding	Intergenic	.	.	Alu	0.294118
20	2117457	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.4
20	3961139	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.363636
20	3961149	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.4
20	3961156	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3961157	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.7
20	3961158	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.3
20	3961208	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3961278	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3961302	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.25
20	3961319	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.388889
20	3961325	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.111111
20	3961341	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.111111
20	3962080	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.111111
20	3962096	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.1875
20	3962108	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.105263
20	3962131	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3962132	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.375
20	3962135	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.25
20	3962234	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.230769
20	3962244	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.230769
20	3962292	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.230769
20	3962294	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.384615
20	3962297	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3962332	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.3
20	3962787	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.461538
20	3962838	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.25
20	3962965	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.214286
20	3997642	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3997668	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.125
20	4006120	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.0952381
20	4794256	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.363636
20	4794259	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	4794702	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.384615
20	5129840	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.142857
20	5129841	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.142857
20	5555354	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5555791	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5555792	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.111111
20	5562462	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0571429
20	5562465	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	5563080	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5563607	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5564583	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0384615
20	5564746	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0470588
20	5564759	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0243902
20	5564779	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0804598
20	5564791	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0357143
20	5564826	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0886076
20	5571833	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0377358
20	5572947	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.216216
20	5572950	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.111111
20	5573000	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0666667
20	5573016	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.272727
20	5573031	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.1
20	5573178	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5573222	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.178571
20	5573249	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0740741
20	5573304	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.136364
20	5573620	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0689655
20	5573622	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.3
20	5573631	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.1
20	5573681	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5573686	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.266667
20	5573709	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5576360	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	5576368	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.214286
20	5577161	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5577162	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.214286
20	5577202	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.130435
20	5577225	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.227273
20	5577293	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	5577444	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5577482	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.176471
20	5578953	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5579050	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5579090	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5579102	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5579485	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.266667
20	5581073	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.454545
20	5581148	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0606061
20	5581150	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.212121
20	5581151	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	5583466	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5587460	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0740741
20	5587470	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	5587479	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5587492	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.190476
20	5587516	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.25
20	5587538	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5587539	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5587562	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.176471
20	5587633	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5587638	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.25
20	5587645	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5588302	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0357143
20	5588325	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0235294
20	5588342	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0333333
20	5588405	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0512821
20	5588773	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.04
20	5588787	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0454545
20	5588806	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.12
20	5589368	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0408163
20	5589446	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.151515
20	5589449	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0555556
20	5589464	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0434783
20	5589480	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.037037
20	5589512	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.144231
20	5589536	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0515464
20	5589549	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0315789
20	5589550	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0744681
20	5589600	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0344828
20	5590349	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.025
20	5590353	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.148148
20	5590369	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0483871
20	5590375	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0327869
20	5590388	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0972222
20	5590443	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0535714
20	5590505	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5599431	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5599651	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.230769
20	5599683	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.3125
20	5599693	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.307692
20	5599719	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5600299	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0769231
20	5600311	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0740741
20	5600338	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.08
20	5600339	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.08
20	5600710	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.08
20	5600720	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5600732	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0666667
20	5600868	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0666667
20	5600878	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0666667
20	5600907	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0645161
20	5601080	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5601136	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.16
20	5601141	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5601246	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.178571
20	5601601	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	5601628	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5601641	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	5601642	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0465116
20	5602739	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0625
20	5602766	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.111111
20	5602826	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0882353
20	5602861	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0681818
20	5602941	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5602944	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.263158
20	5604036	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.307692
20	8141473	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
21	8218777	A->G	-	ENSG00000278996	FP671120.1	lincRNA	Intergenic	.	.	Alu	1
21	8446047	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	10261454	A->G	+	ENSG00000054523	KIF1B	protein_coding	Intergenic	.	.	Alu	0.5
1	10263104	A->G	+	ENSG00000054523	KIF1B	protein_coding	Intergenic	.	.	Alu	0.0740741
1	11020859	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.153846
1	11020869	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.333333
1	11020871	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.142857
1	11021256	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.181818
1	11021530	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.166667
1	11021885	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.25
1	11021891	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.136364
1	12174366	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.166667
1	12200752	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.133333
1	13767574	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.2
1	13767811	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.125
1	13767824	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.117647
1	13767854	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.571429
1	13767868	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.615385
1	13767881	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.2
1	13767901	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.3125
1	13767931	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.117647
1	15913801	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.3
1	16896187	A->G	+	ENSG00000058453	CROCC	protein_coding	Intergenic	.	.	Alu	0.1
1	16896330	A->G	+	ENSG00000058453	CROCC	protein_coding	Intergenic	.	.	Alu	0.428571
1	19215243	A->G	-	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.181818
1	19598985	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	19599292	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.181818
1	19599334	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.111111
1	19600731	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.2
1	20593008	A->G	+	ENSG00000158825	CDA	protein_coding	Intergenic	.	.	Alu	0.2
1	20775410	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.538462
1	21139815	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21164484	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21164509	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.307692
1	21164510	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.153846
1	21173232	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.3
1	22058583	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0909091
1	22058601	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.153846
1	22062065	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
1	22062156	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
1	22062171	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.166667
1	22066942	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0833333
1	22067581	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.181818
1	22073717	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.105263
1	22081101	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.166667
1	22083447	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.266667
1	22083450	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.133333
1	23964300	A->G	+	.	.	.	Intergenic	.	.	Alu	1
1	23968743	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	1
1	23972105	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.583333
1	23974359	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.6
1	23974707	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.153846
1	27627773	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.230769
1	27627791	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.142857
1	27627808	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.333333
1	27628166	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.272727
1	27874131	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	27874132	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.125
1	27874144	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.125
1	27874149	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27874158	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27874219	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.30303
1	27874244	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.363636
1	27874255	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.25
1	27874269	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	27874270	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27874303	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.227273
1	27874372	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27874383	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.125
1	27874385	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.075
1	27874416	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1
1	27874445	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.115385
1	27874455	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.136364
1	27874526	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.296296
1	27874527	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0740741
1	27874549	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27874553	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.173913
1	27874600	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27874635	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27874639	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.125
1	27874661	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.363636
1	27874834	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0595238
1	27874837	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0595238
1	27874851	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0240964
1	27874859	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.157303
1	27874861	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0215054
1	27874873	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.118812
1	27874876	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.132075
1	27875037	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0526316
1	27875079	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0493827
1	27875083	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0410959
1	27875096	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	27875116	A->G	-	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27875118	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0483871
1	27875161	A->G	-	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27875840	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1
1	27876087	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.210526
1	27877997	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27880215	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27880241	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.5
1	27880302	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27880314	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.272727
1	27880324	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.25
1	27880395	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.153846
1	27880447	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27880603	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0714286
1	27880651	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	27880666	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	27880847	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.181818
1	27880878	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.133333
1	27880907	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.133333
1	27880982	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.363636
1	27881040	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.153846
1	27881396	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.125
1	27881421	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.133333
1	27881427	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	27888856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	28089834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
1	28170597	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.2
1	28171201	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.133333
1	28171266	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.1875
1	28172058	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.113208
1	28172088	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.0789474
1	28172089	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.194444
1	28172194	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.190476
1	28172195	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.0952381
1	28172198	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.111111
1	28172288	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.075
1	28329550	A->G	+	ENSG00000130772	MED18	protein_coding	Intergenic	.	.	Alu	0.2
1	28329562	A->G	+	ENSG00000130772	MED18	protein_coding	Intergenic	.	.	Alu	0.230769
1	28330008	A->G	+	ENSG00000130772	MED18	protein_coding	Intergenic	.	.	Alu	0.1875
1	29174877	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.142857
1	29175305	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.333333
1	29175313	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.181818
1	30743974	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.166667
1	30743975	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.310345
1	30743982	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.227273
1	31919924	A->G	-	ENSG00000269967	AL136115.2	lincRNA	Intergenic	.	.	Alu	0.176471
1	31919964	A->G	-	ENSG00000269967	AL136115.2	lincRNA	Intergenic	.	.	Alu	0.25
1	31935946	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.2
1	31936317	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.1
1	32222907	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.111111
1	32222918	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.125
1	33023525	A->G	-	ENSG00000236065	AL020995.1	antisense	Intergenic	.	.	Alu	0.3
1	33023527	A->G	-	ENSG00000236065	AL020995.1	antisense	Intergenic	.	.	Alu	0.4
1	33028412	A->G	-	ENSG00000236065	AL020995.1	antisense	Intergenic	.	.	Alu	0.111111
1	33028419	A->G	-	ENSG00000236065	AL020995.1	antisense	Intergenic	.	.	Alu	0.25
1	33029626	A->G	-	ENSG00000236065	AL020995.1	antisense	Intergenic	.	.	Alu	0.181818
1	33029688	A->G	-	ENSG00000236065	AL020995.1	antisense	Intergenic	.	.	Alu	0.142857
1	36177440	A->G	+	ENSG00000116871	MAP7D1	protein_coding	Intergenic	.	.	Alu	0.272727
1	36233447	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.3
1	36234089	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.3
1	36376852	A->G	-	ENSG00000196182	STK40	protein_coding	Intergenic	.	.	Alu	0.2
1	36376855	A->G	-	ENSG00000196182	STK40	protein_coding	Intergenic	.	.	Alu	0.133333
1	37547618	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.2
1	37547693	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.3
1	37550928	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.5
1	37550931	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.2
1	37852920	A->G	-	ENSG00000188786	MTF1	protein_coding	Intergenic	.	.	Alu	0.181818
1	37852926	A->G	-	ENSG00000188786	MTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	40043259	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	40043291	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	40043667	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	40051294	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.2
1	40227817	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.181818
1	40378144	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.363636
1	40378194	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.214286
1	40378241	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.190476
1	40378527	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.294118
1	40398724	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.3
1	40398756	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	44730812	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0434783
1	45657345	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.1875
1	45657741	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45675617	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.272727
1	51242677	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.454545
1	51247310	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.181818
1	51247521	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51266602	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	52406089	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.3
1	52407841	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.2
1	52409347	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.333333
1	52409349	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.133333
1	52409435	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.2
1	52409450	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.133333
1	52409464	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.2
1	58544655	A->G	-	ENSG00000162600	OMA1	protein_coding	Intergenic	.	.	Alu	0.2
1	65421126	A->G	+	ENSG00000213625	LEPROT	protein_coding	Intergenic	.	.	Alu	1
1	66944909	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	67417132	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.2
1	77950221	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.15
1	77973308	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	77973957	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	88984482	A->G	-	ENSG00000137944	KYAT3	protein_coding	Intergenic	.	.	Alu	0.3
1	89016713	A->G	-	ENSG00000117226	GBP3	protein_coding	Intergenic	.	.	Alu	0.2
1	89640337	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.133333
1	89642646	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.166667
1	89642666	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.26087
1	89643148	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.25
1	89643155	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.153846
1	89643303	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.130435
1	89644413	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0555556
1	89647946	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.125
1	89660333	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.157895
1	89679466	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.2
1	89679493	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.25
1	89996619	A->G	+	ENSG00000162664	ZNF326	protein_coding	Intergenic	.	.	Alu	0.266667
1	89997474	A->G	+	ENSG00000162664	ZNF326	protein_coding	Intergenic	.	.	Alu	0.2
1	90965531	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.333333
1	90965533	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.363636
1	90965777	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.181818
1	90965812	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.3
1	90972037	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.25
1	90972038	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.1875
1	91012395	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.266667
1	91012396	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.133333
1	91012426	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.153846
1	91013211	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0714286
1	91019699	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0666667
1	92479771	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.3
1	93155764	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.357143
1	93157576	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.142857
1	93163900	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.545455
1	93176726	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.105263
1	93176727	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.105263
1	93177494	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.153846
1	96729231	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.08
1	96733559	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.25
2	10308931	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.4
2	10309190	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.166667
2	10811402	A->G	-	ENSG00000143870	PDIA6	protein_coding	Intergenic	.	.	Alu	0.133333
2	16607652	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.0638298
2	16607734	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.0625
2	16607735	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.0625
2	16607876	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.0454545
2	20271914	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20292867	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20338248	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20338269	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20343753	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20344284	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.130435
2	20344286	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.130435
2	20344334	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20345243	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20345249	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.363636
2	20345376	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.08
2	20345382	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.1
2	20345383	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.137931
2	20345836	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.230769
2	20345867	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.125
2	23928091	A->G	+	ENSG00000173960	UBXN2A	protein_coding	Intergenic	.	.	Alu	0.117647
2	24264189	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.133333
2	24264200	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.157895
2	26036405	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.2
2	26036406	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.2
2	26037383	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.125
2	26037432	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.2
2	26038775	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.181818
2	26038801	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.545455
2	26039083	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.307692
2	26039804	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.411765
2	26040183	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.285714
2	26040409	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.125
2	26040439	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.315789
2	26040537	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.181818
2	26040573	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.2
2	26040613	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.105263
2	26042581	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.153846
2	26043343	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.1
2	26043410	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.0740741
2	28759260	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28759282	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28759824	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1875
2	28759853	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.15
2	28761137	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0526316
2	28763903	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.25
2	28786144	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28786194	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.230769
2	28789249	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0714286
2	28789291	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.305556
2	28789292	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28789324	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28789411	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28789434	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.315789
2	28789464	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0769231
2	28789491	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0769231
2	28789497	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.130435
2	28789808	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.12
2	28789833	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0645161
2	28789834	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.09375
2	28789849	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0588235
2	28790098	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0645161
2	28790103	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0645161
2	28790133	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0857143
2	28790137	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0882353
2	28790165	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0810811
2	28790206	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.190476
2	28790213	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28790433	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.117647
2	28790440	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28790542	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	30154991	A->G	+	ENSG00000119801	YPEL5	protein_coding	Intergenic	.	.	Alu	0.0555556
2	30155000	A->G	+	ENSG00000119801	YPEL5	protein_coding	Intergenic	.	.	Alu	0.0571429
2	32368726	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.117647
2	32369505	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32369528	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.230769
2	32505948	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.136364
2	32505970	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.103448
2	32505976	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0769231
2	32506111	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0606061
2	32507201	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.105263
2	32507351	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0909091
2	32509464	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.3
2	32509484	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	40417526	A->G	-	ENSG00000183023	SLC8A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	40417569	A->G	-	ENSG00000183023	SLC8A1	protein_coding	Intergenic	.	.	Alu	0.266667
2	40417571	A->G	-	ENSG00000183023	SLC8A1	protein_coding	Intergenic	.	.	Alu	0.357143
2	42173593	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42176955	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.142857
2	42176974	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.266667
2	42176977	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.142857
2	42177013	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42177543	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	44174999	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44175000	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44355427	A->G	-	ENSG00000138078	PREPL	protein_coding	Intergenic	.	.	Alu	0.153846
2	44355492	A->G	-	ENSG00000138078	PREPL	protein_coding	Intergenic	.	.	Alu	0.2
2	44356943	A->G	-	ENSG00000138078	PREPL	protein_coding	Intergenic	.	.	Alu	0.142857
2	46577676	A->G	+	ENSG00000119729	RHOQ	protein_coding	Intergenic	.	.	Alu	0.125
2	46577677	A->G	+	ENSG00000119729	RHOQ	protein_coding	Intergenic	.	.	Alu	0.117647
2	46578740	A->G	+	ENSG00000119729	RHOQ	protein_coding	Intergenic	.	.	Alu	0.166667
2	46942964	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.133333
2	46946501	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.1
2	46946631	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.105263
2	46947596	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.2
2	46948734	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.125
2	46952544	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.230769
2	46953311	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.2
2	46953357	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.25
2	47168547	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.133333
2	47824267	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47830915	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.125
2	47830978	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.133333
2	47836204	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3
2	47836233	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.166667
2	47836263	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3125
2	47836264	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.266667
2	47836266	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.125
2	47836507	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.230769
2	47837842	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47880085	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3
2	47887613	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.142857
2	47890193	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.222222
2	47891070	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.272727
2	48368419	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.307692
2	48368420	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	48368463	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.466667
2	48368464	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.142857
2	53899755	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53899756	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53905453	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53905483	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53905528	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53918587	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.1875
2	53929083	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.1875
2	53929160	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53929164	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53965401	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53965405	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.266667
2	53965427	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	55032334	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.133333
2	55032912	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.133333
2	60897433	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.166667
2	60903705	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.117647
2	60903783	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.210526
2	60903805	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.111111
2	60904217	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.454545
2	60904225	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.181818
2	60904796	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.333333
2	60904800	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.153846
2	60907413	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60907953	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.136364
2	60932879	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
2	60933140	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
2	60935321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
2	60935459	A->G	+	.	.	.	Intergenic	.	.	Alu	0.291667
2	60935891	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
2	61479247	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61503818	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	61503935	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.266667
2	61503954	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.25
2	61505657	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.136364
2	61505670	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	61505674	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	61505719	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.125
2	61506517	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61509022	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.214286
2	61509035	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.25
2	61509461	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.15
2	61509464	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	61509478	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61509579	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.111111
2	61510077	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	61510195	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61510267	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	61510719	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.176471
2	61510720	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.15
2	61511221	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	61511550	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61512919	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.375
2	61512964	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	61513117	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	61513219	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.157895
2	61513223	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61513271	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.1
2	61513285	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.214286
2	61513288	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.466667
2	61513439	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61513463	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.1875
2	61513507	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.125
2	61513552	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.125
2	61513567	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.15
2	61513592	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.25
2	61513597	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.4
2	61513598	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61513934	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61513950	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61513959	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	61513963	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	61513995	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.636364
2	61514017	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61516004	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.375
2	61516971	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.357143
2	61516972	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.214286
2	61516976	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.133333
2	61517014	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.454545
2	61517036	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	61517081	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	61517108	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61517180	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61517469	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.3
2	61517473	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61517534	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61517825	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	61518030	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	61518073	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	61519195	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	61519199	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	61519221	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.3
2	61519222	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61527372	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.363636
2	61527405	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.176471
2	61527483	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	61529135	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.157895
2	64136803	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0540541
2	64139408	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.1
2	64529683	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.25
2	64529729	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.375
2	64530035	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.230769
2	64530036	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.153846
2	65091674	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.692308
2	65091690	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65091694	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.125
2	65091748	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.214286
2	65092207	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65092213	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.611111
2	65094108	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.125
2	65094147	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65094189	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.214286
2	65094197	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	65094212	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.4
2	65094422	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.25
2	65094428	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.611111
2	65094472	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.15
2	65094502	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65094508	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.4375
2	65095488	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	65095645	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	65095844	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65095846	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.3125
2	65095989	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65100644	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.125
2	65101110	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	65102721	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65102778	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65105260	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.230769
2	65107977	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1875
2	65107978	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1875
2	65108770	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65118751	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.285714
2	65119359	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.3
2	65119407	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65119760	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65119761	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65119788	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.125
2	65121908	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65123660	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.307692
2	65123731	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65124568	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65127639	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.115385
2	65230679	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.666667
2	65230798	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.142857
2	65230799	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.375
2	65230825	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.125
2	65230877	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.142857
2	65230895	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.2
2	65237351	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.176471
2	65424789	A->G	-	ENSG00000198369	SPRED2	protein_coding	Intergenic	.	.	Alu	0.166667
2	68208034	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.142857
2	68211217	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.181818
2	68212141	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.125
2	68212143	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.235294
2	68212218	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.153846
2	68212260	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.125
2	68212263	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.125
2	68232762	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.153846
2	68232833	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.384615
2	68234221	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.153846
2	69928665	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.153846
2	69928974	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.15
2	69929113	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.25
2	71387577	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.545455
2	74185367	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
2	74864607	A->G	+	ENSG00000159399	HK2	protein_coding	Intergenic	.	.	Alu	0.105263
2	74864745	A->G	+	ENSG00000159399	HK2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	86561586	A->G	-	ENSG00000115561	CHMP3	protein_coding	Intergenic	.	.	Alu	0.272727
2	86562452	A->G	-	ENSG00000228363	AC015971.1	antisense	Intergenic	.	.	Alu	0.111111
2	87461762	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.3
2	96200171	A->G	-	ENSG00000084090	STARD7	protein_coding	Intergenic	.	.	Alu	0.133333
2	96200176	A->G	-	ENSG00000084090	STARD7	protein_coding	Intergenic	.	.	Alu	0.176471
2	96200194	A->G	-	ENSG00000084090	STARD7	protein_coding	Intergenic	.	.	Alu	0.166667
2	96200282	A->G	-	ENSG00000084090	STARD7	protein_coding	Intergenic	.	.	Alu	0.272727
2	96244848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
2	96263176	A->G	-	ENSG00000135956	TMEM127	protein_coding	Intergenic	.	.	Alu	0.133333
2	97200092	A->G	+	ENSG00000135976	ANKRD36	protein_coding	Intergenic	.	.	Alu	0.3
2	97828089	A->G	+	ENSG00000075568	TMEM131	protein_coding	Intergenic	.	.	Alu	1
2	98450795	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.153846
2	98450872	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.166667
2	98450913	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.117647
2	98457329	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.0909091
2	98458277	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.142857
2	98462967	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.3
2	98462968	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.2
2	98462983	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.2
2	98463025	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.2
2	98463028	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.2
2	98463042	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.526316
2	98463102	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.421053
2	98463104	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.238095
2	98468259	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.181818
2	98469759	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.363636
2	98496648	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.272727
2	99401600	A->G	+	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.2
3	10143547	A->G	+	ENSG00000134086	VHL	protein_coding	Intergenic	.	.	Alu	0.272727
3	10143548	A->G	+	ENSG00000134086	VHL	protein_coding	Intergenic	.	.	Alu	0.2
3	10143649	A->G	+	ENSG00000134086	VHL	protein_coding	Intergenic	.	.	Alu	0.117647
3	10152373	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0363636
3	10152543	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
3	10152750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	10153243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
3	10153282	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10175512	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.3
3	10175529	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	10195293	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	11289670	A->G	+	ENSG00000197548	ATG7	protein_coding	Intergenic	.	.	Alu	0.181818
3	12295607	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.181818
3	12295613	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.166667
3	12296092	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.1
3	12296093	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.0952381
3	12296096	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.363636
3	12296099	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.136364
3	12296102	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.0833333
3	12296167	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.0625
3	12296172	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.142857
3	12597803	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.3
3	12597806	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12598151	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.111111
3	12598157	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.444444
3	12598226	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	12647481	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.125
3	12647498	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.157895
3	12647506	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.1
3	12647548	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.125
3	12647560	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.125
3	12654502	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12654526	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	12660436	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12660732	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.1875
3	12660790	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.3
3	12998914	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.35
3	12998917	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.3125
3	12999731	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.526316
3	12999732	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.789474
3	13001942	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.25
3	13001947	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.166667
3	13002037	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.4375
3	13002042	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.285714
3	14416867	A->G	+	ENSG00000131389	SLC6A6	protein_coding	Intergenic	.	.	Alu	0.0952381
3	14416875	A->G	+	ENSG00000131389	SLC6A6	protein_coding	Intergenic	.	.	Alu	0.0909091
3	14416938	A->G	+	ENSG00000131389	SLC6A6	protein_coding	Intergenic	.	.	Alu	0.117647
3	15721866	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0625
3	15726029	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0714286
3	15726037	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0689655
3	15741011	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.272727
3	15772835	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0714286
3	15773503	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.027027
3	15773538	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.027027
3	15773539	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0405405
3	15773542	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.144928
3	15773543	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.115942
3	19951544	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.111111
3	19951545	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0833333
3	19954593	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.111111
3	19962930	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.181818
3	19962938	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.181818
3	23831790	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23832525	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23838168	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	23838171	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.368421
3	23848259	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23960258	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.333333
3	25657818	A->G	-	ENSG00000077097	TOP2B	protein_coding	Intergenic	.	.	Alu	0.105263
3	28333961	A->G	-	ENSG00000163512	AZI2	protein_coding	Intergenic	.	.	Alu	0.4
3	28333972	A->G	-	ENSG00000163512	AZI2	protein_coding	Intergenic	.	.	Alu	0.3
3	28335085	A->G	-	ENSG00000163512	AZI2	protein_coding	Intergenic	.	.	Alu	0.6
3	33429414	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.2
3	33432212	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.117647
3	33432242	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.142857
3	37171068	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	37173076	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.0882353
3	37173341	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.470588
3	37173445	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	38136433	A->G	-	ENSG00000060971	ACAA1	protein_coding	Intergenic	.	.	Alu	0.176471
3	39058151	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.157895
3	39063681	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.642857
3	39409295	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.272727
3	39409301	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.153846
3	39409341	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.153846
3	39409368	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.153846
3	39409382	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.166667
3	41210267	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0526316
3	41210333	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	41210374	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.190476
3	41210375	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	41210821	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.272727
3	41210902	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.363636
3	41210929	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.321429
3	41210982	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0882353
3	41211067	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0350877
3	42015969	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.266667
3	42044396	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.166667
3	42044405	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.111111
3	42067917	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.2
3	48692011	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.272727
3	48710207	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48714485	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.166667
3	49320585	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.3
3	49320587	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.4
3	49321895	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49322589	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.0769231
3	49322605	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.1
3	49322616	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.235294
3	49322617	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49324041	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.214286
3	49329431	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.176471
3	49332201	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49332230	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.25
3	49332233	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.272727
3	49344046	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
3	49344065	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
3	49344170	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
3	49344262	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
3	49344325	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
3	49344386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.466667
3	49344552	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0851064
3	49344558	A->G	-	.	.	.	Intergenic	.	.	Alu	0.189189
3	49344561	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
3	49344603	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
3	49344613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
3	49344619	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0512821
3	49344939	A->G	-	.	.	.	Intergenic	.	.	Alu	0.04
3	49351429	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	49351439	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
3	49360530	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.181818
3	49363298	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.2
3	49363308	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.133333
3	49365973	A->G	-	ENSG00000235908	RHOA-IT1	sense_intronic	Intergenic	.	.	Alu	0.142857
3	49367659	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.333333
3	49369482	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.133333
3	49378049	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.181818
3	49392926	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.125
3	49392951	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.181818
3	49400605	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.176471
3	49400659	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.272727
3	49400664	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.181818
3	49400669	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.416667
3	49405774	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.214286
3	49405782	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.117647
3	49405822	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.157895
3	49405823	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.157895
3	49779891	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49782729	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49784510	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49784562	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	50095122	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.153846
3	50096220	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.153846
3	50096264	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	50096305	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.25
3	50096702	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.133333
3	50096720	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.133333
3	50096797	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.3
3	50096809	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.25
3	50096875	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.137931
3	50097154	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.3
3	50098294	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50621406	A->G	+	ENSG00000114738	MAPKAPK3	protein_coding	Intergenic	.	.	Alu	0.133333
3	51387527	A->G	+	ENSG00000145050	MANF	protein_coding	Intergenic	.	.	Alu	0.2
3	51551536	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.166667
3	52199915	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.166667
3	52199948	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.133333
3	52199967	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.363636
3	52209301	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.142857
3	52209748	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.0540541
3	52209779	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.0540541
3	52209780	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.0526316
3	52210506	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.294118
3	52210513	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.2
3	52210519	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.133333
3	52210524	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.133333
3	52210610	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.153846
3	52210728	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.333333
3	52210734	A->G	+	ENSG00000023330	ALAS1	protein_coding	Intergenic	.	.	Alu	0.181818
3	53250553	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.125
3	53250568	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.142857
3	53250688	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.285714
3	53250879	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.153846
3	53250897	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.176471
3	53250970	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.181818
3	53250974	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.230769
3	53251022	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.142857
3	53251066	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.263158
3	53251794	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.08
3	53253034	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.181818
3	53253087	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.142857
3	53253153	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.166667
3	53253428	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.0833333
3	53253445	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.230769
3	53253701	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.3
3	53253733	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.2
3	53309597	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.2
3	53309689	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.111111
3	53309732	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.133333
3	53309757	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.111111
3	57592388	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.166667
3	57592452	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.3
3	57594086	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.25
3	57594363	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.214286
3	58426565	A->G	+	.	.	.	Intergenic	.	.	Alu	0.258065
3	58426566	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	58426570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
3	58426602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	58426611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.192308
3	58426651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
3	58427044	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
3	58427089	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
3	58427099	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	58427105	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
3	58427125	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	58427128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.466667
3	58427129	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	58427443	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	58427480	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	58427515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	58427528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	58427533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	58427534	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	58427541	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	58427576	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
3	63867413	A->G	+	ENSG00000285399	AC104162.2	bidirectional_promoter_lncRNA	Intergenic	.	.	Alu	0.384615
3	71292413	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	71559584	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.4
3	71576712	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.285714
3	71576733	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.5
3	71578204	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	71578292	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.115385
3	71578380	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.0857143
3	71778097	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0512821
3	72393164	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.111111
3	72393165	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.105263
3	72396923	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.117647
3	72396972	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.181818
3	72435210	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.111111
3	72436098	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0681818
3	72440017	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0882353
3	72440089	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.243902
3	72443386	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.047619
4	15623961	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.09375
4	15633725	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.153846
4	15633800	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.214286
4	15633803	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.176471
4	15633842	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.25
4	15635509	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.108108
4	15635528	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.128205
4	15635591	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.111111
4	15635597	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.176471
4	15635629	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.235294
4	15640071	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.1
4	15640117	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.0952381
4	15640317	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.15
4	15640318	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.1
4	15641915	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.181818
4	15642006	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.1875
4	15642357	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.157895
4	15680445	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.142857
4	15728691	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.363636
4	15728771	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.368421
4	15728772	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.105263
4	15728787	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.238095
4	15728831	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.133333
4	15728833	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.125
4	15728836	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.266667
4	15728837	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.4
4	15728866	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.5
4	15728880	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.08
4	15728907	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	15728908	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	15729213	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.214286
4	15729246	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.307692
4	15729250	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.363636
4	15729333	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.923077
4	15729341	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.142857
4	15729345	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.272727
4	15729349	A->G	+	ENSG00000109743	BST1	protein_coding	Intergenic	.	.	Alu	0.818182
4	15780933	A->G	+	ENSG00000004468	CD38	protein_coding	Intergenic	.	.	Alu	0.0740741
4	16220637	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.153846
4	16220933	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.230769
4	16220942	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.333333
4	16221238	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.125
4	16221242	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.25
4	24547700	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.416667
4	25237771	A->G	+	ENSG00000038210	PI4K2B	protein_coding	Intergenic	.	.	Alu	0.133333
4	26328645	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.307692
4	26328680	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.111111
4	26328682	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.157895
4	26328762	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.125
4	26379811	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.3
4	37611416	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0568182
4	37677890	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.2
4	37680739	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.25
4	37683500	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.0606061
4	37683591	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.08
4	37683698	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.1
4	39048737	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.333333
4	39048744	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.357143
4	39048850	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.2
4	39050019	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.166667
4	40077637	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.2
4	40595643	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.0909091
4	40595653	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.142857
4	40595796	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.230769
4	40595818	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.125
4	40610009	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.2
4	40620031	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.133333
4	40624055	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.111111
4	48266621	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.166667
4	48266635	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.272727
4	48266650	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.3
4	54053300	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.133333
4	55400555	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.153846
4	55400604	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.272727
4	55400613	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.181818
4	67517300	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.363636
4	67517387	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.142857
4	68317210	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	68327205	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.1875
4	68327233	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.333333
4	68335937	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.272727
4	68344990	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.105263
4	75663299	A->G	-	ENSG00000138757	G3BP2	protein_coding	Intergenic	.	.	Alu	0.166667
4	75916944	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.0377358
4	77059595	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.157895
4	77064085	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.142857
4	77065903	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.2
4	77066049	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.142857
4	77067149	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.125
4	77067540	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.166667
4	77067593	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.3
4	80019147	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.181818
4	81448857	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.03125
4	81448911	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.129032
4	81448926	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0645161
4	81449085	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0487805
4	81450336	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0869565
4	81450530	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.021978
4	81450768	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0392157
4	81450801	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0588235
4	81450803	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.128571
4	81450841	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0769231
4	81450857	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0675676
4	81450861	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0606061
4	82858096	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.153846
4	82858178	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.4
4	82896647	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.172414
4	84964772	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.222222
4	84964773	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.277778
4	84964811	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.411765
4	85583570	A->G	+	ENSG00000138639	ARHGAP24	protein_coding	Intergenic	.	.	Alu	0.214286
4	86937605	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.25
4	86937656	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.214286
4	86940476	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.125
4	86940528	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	86962919	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	86962925	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	87023020	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	87051485	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	87051487	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	87052152	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	87052158	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.130435
4	87052328	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.357143
4	87052333	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	87055036	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	87085991	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	98885671	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.230769
4	98885685	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.166667
4	98885698	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.133333
4	98885711	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.111111
4	98885731	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.125
5	10358574	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.103448
5	10358682	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.4375
5	10359613	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.176471
5	10359626	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.294118
5	10359856	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.142857
5	10359859	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.214286
5	10359885	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.2
5	10360203	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.2
5	14715211	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.2
5	17235390	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.230769
5	17237740	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.176471
5	17237776	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.217391
5	17237820	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	17237891	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	32155218	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.2
5	32165461	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.166667
5	32165471	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.333333
5	32165500	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.285714
5	32166590	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.230769
5	32358101	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.166667
5	32365799	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.135135
5	32367013	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.125
5	32367167	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0731707
5	32367168	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0714286
5	32367217	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0526316
5	32367231	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0909091
5	32367313	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.263158
5	32367372	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.6
5	32367378	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.416667
5	32367555	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.448276
5	32367567	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.275862
5	32367610	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0888889
5	32367613	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.456522
5	32367632	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0526316
5	32368515	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0731707
5	32369736	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0769231
5	32373138	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0769231
5	32374340	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.125
5	32375671	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.1
5	32375944	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.117647
5	32375979	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.133333
5	32376821	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.157895
5	32376828	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0952381
5	32376867	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.105263
5	32376871	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.1
5	32376896	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.125
5	32376917	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0952381
5	32376927	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.190476
5	32377452	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0952381
5	32377830	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0909091
5	32377891	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0666667
5	32380823	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0909091
5	32382136	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.181818
5	32382224	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.214286
5	32382225	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.225
5	32382228	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2
5	32382235	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.351351
5	32382265	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.025974
5	32382273	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2625
5	32382301	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0487805
5	32382305	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.108434
5	32382699	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.125
5	32382702	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.117647
5	32382707	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.136364
5	32382747	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0576923
5	32382748	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0576923
5	32382774	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0298507
5	32384899	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	1
5	32398783	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.166667
5	32398784	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.285714
5	32589349	A->G	+	ENSG00000113387	SUB1	protein_coding	Intergenic	.	.	Alu	0.1
5	34219917	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.941176
5	34941331	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.363636
5	40687077	A->G	+	ENSG00000171522	PTGER4	protein_coding	Intergenic	.	.	Alu	0.0697674
5	44816252	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.181818
5	50413687	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.363636
5	50414304	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.214286
5	50414307	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.529412
5	50414333	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.461538
5	50414352	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.333333
5	50433600	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.642857
5	50697180	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.166667
5	54523337	A->G	+	ENSG00000178996	SNX18	protein_coding	Intergenic	.	.	Alu	0.428571
5	55958208	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.2
5	56840975	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.166667
5	57183841	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.25
5	57186155	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	57214464	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.117647
5	57214479	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.230769
5	59573747	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.181818
5	59573763	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.166667
5	59666188	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.2
5	59666233	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.2
5	59666234	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.2
5	59879919	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.181818
5	59880369	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.363636
5	59909581	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.272727
5	59917050	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.117647
5	59981017	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.181818
5	59985336	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.142857
5	59985362	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.12
5	59985375	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.0714286
5	59985422	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.0606061
5	60134383	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.166667
5	60134389	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.25
5	60134393	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.181818
5	60134422	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.2
5	60134423	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.133333
5	60134498	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.166667
5	60136352	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.125
5	60867936	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
5	60867937	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
5	60873449	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
5	60873458	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
5	61339318	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.105263
5	61366170	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.214286
5	61366173	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.230769
5	61367356	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.133333
5	61367437	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.166667
5	61367859	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.181818
5	65939189	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.3
5	66148662	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.2
5	68235204	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.181818
5	68235216	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.117647
5	68235232	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.153846
5	68235238	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.214286
5	68240633	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	1
5	71465123	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	72853226	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	75346039	A->G	+	ENSG00000113161	HMGCR	protein_coding	Intergenic	.	.	Alu	0.166667
5	75346249	A->G	+	ENSG00000113161	HMGCR	protein_coding	Intergenic	.	.	Alu	0.1875
5	75346940	A->G	+	ENSG00000113161	HMGCR	protein_coding	Intergenic	.	.	Alu	0.363636
5	76407018	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.142857
5	76407042	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.1
5	76407043	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.1
5	76407058	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.173913
5	76407127	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.105263
5	76407940	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.105263
5	76407949	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.176471
5	76407997	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.15
5	76408010	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.25
5	76408011	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.208333
5	76408105	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.136364
5	76408116	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.15
5	76408630	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.117647
5	76408640	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.277778
5	76408872	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.117647
5	76408879	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.125
5	76408932	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.190476
5	76408934	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.15
5	76409045	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.0666667
5	76409061	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.0689655
5	76409316	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.130435
5	83075552	A->G	-	ENSG00000174695	TMEM167A	protein_coding	Intergenic	.	.	Alu	0.166667
5	83514507	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.277778
5	83514515	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.111111
5	83514520	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.277778
5	83514578	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.153846
5	83514639	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.181818
5	83514659	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.666667
5	83514668	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.117647
5	83514702	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.166667
5	83514720	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.107143
5	83514721	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.148148
5	83515977	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.1875
5	83516021	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.142857
5	83516045	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.416667
5	83516085	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.36
5	83516229	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.133333
5	83516233	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.176471
5	83516234	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.235294
5	83516236	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.117647
5	87382049	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.2
5	87398784	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.285714
5	91308919	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.166667
5	91309082	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.2
5	91310190	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.2
5	91310800	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0666667
5	94033109	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.272727
5	94049710	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.142857
5	94049738	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.133333
5	94050042	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
5	95007031	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.0789474
5	95007194	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.151515
5	95007225	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.0810811
5	95060824	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.2
5	95060860	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	95072950	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	96663822	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	1
5	96724635	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.142857
5	96724712	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.461538
5	98868205	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.285714
5	98891284	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98891754	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.461538
5	98894933	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.142857
5	98894986	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
5	98894989	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	98894999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98895000	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98895003	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98895628	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.130435
5	98895645	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98895670	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.12
5	98895677	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	98918660	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.130435
5	98923450	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.105263
5	98923532	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98923589	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98923997	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	98923999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.190476
5	98924150	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	98924161	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.190476
5	98924215	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.375
5	98924245	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98924883	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
6	10831600	A->G	-	ENSG00000111837	MAK	protein_coding	Intergenic	.	.	Alu	0.230769
6	10831604	A->G	-	ENSG00000111837	MAK	protein_coding	Intergenic	.	.	Alu	0.357143
6	10833388	A->G	-	ENSG00000111837	MAK	protein_coding	Intergenic	.	.	Alu	0.166667
6	10833402	A->G	-	ENSG00000111837	MAK	protein_coding	Intergenic	.	.	Alu	0.157895
6	14121273	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0306122
6	15251086	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0666667
6	15251129	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.097561
6	15251141	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0606061
6	15251151	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0540541
6	15251178	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15251218	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.428571
6	15251278	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.3
6	15251794	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.130435
6	15251813	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.310345
6	15251816	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0606061
6	15251857	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15251858	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0810811
6	15254864	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15255234	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0967742
6	15255288	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.307692
6	15255355	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.277778
6	15258671	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15269639	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.214286
6	15269681	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	15270237	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15271577	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15273581	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15273650	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15291083	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15291084	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15291089	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15291214	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15302345	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.272727
6	15307423	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.9
6	15319467	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15321867	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15323664	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.230769
6	15335979	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15335987	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.105263
6	15351290	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.5625
6	15376639	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.3
6	15377565	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.111111
6	15377984	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15417467	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15417480	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15417597	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.272727
6	15417616	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15417623	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15418347	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15418357	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25
6	15418375	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15418398	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.176471
6	15424182	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.3
6	15455073	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.157895
6	15455553	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15455555	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	16734562	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.3
6	17658339	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.117647
6	17658344	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.214286
6	17659540	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.117647
6	17659541	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.117647
6	17659611	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.333333
6	17659624	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.2
6	18166774	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.266667
6	18166817	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.3
6	18167619	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.333333
6	18167621	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.166667
6	18167702	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.142857
6	18167736	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.25
6	18167781	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.285714
6	18167811	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.428571
6	18167951	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.166667
6	18167999	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.214286
6	18168022	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.461538
6	18168028	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.454545
6	24707440	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.1
6	24707522	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.105263
6	24708476	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.153846
6	24710891	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.111111
6	24710897	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0714286
6	24712168	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.2
6	24934516	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.642857
6	25101014	A->G	-	ENSG00000168405	CMAHP	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.3
6	25964911	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.181818
6	25976505	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.117647
6	25976506	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.1875
6	25977441	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.307692
6	26125509	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.205128
6	26125547	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.108108
6	26125804	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.272727
6	26129386	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.142857
6	26129422	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.2
6	26129455	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.2
6	26129466	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.2
6	26129483	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.181818
6	26131368	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.142857
6	26132007	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.153846
6	26233620	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
6	26233621	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0540541
6	27124926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	27143160	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	27143189	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	27143252	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	27143262	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
6	27144217	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	27145024	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	30200276	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.166667
6	30579557	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.166667
6	30589182	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.307692
6	31831112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
6	31831216	A->G	+	.	.	.	Intergenic	.	.	Alu	0.04
6	31831243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
6	31831529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	31831605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
6	31831607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
6	31831813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
6	31831816	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	31831842	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
6	31831856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	32582064	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	1
6	32588017	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	1
6	33260281	A->G	-	ENSG00000223501	VPS52	protein_coding	Intergenic	.	.	Alu	0.2
6	33306775	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.2
6	34422957	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.230769
6	34422959	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.153846
6	34422969	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.230769
6	34423421	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.111111
6	35316240	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.181818
6	35679031	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35683304	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	36031492	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.153846
6	36542107	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.2
6	36542116	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.157895
6	36542124	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.2
6	36542532	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.5
6	36542559	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.117647
6	36542581	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0952381
6	36542582	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0952381
6	36542597	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.157895
6	36543515	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.36
6	36543527	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.269231
6	36543528	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0769231
6	36543569	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.210526
6	36543573	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.166667
6	36543589	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.384615
6	36543593	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.230769
6	36543595	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.357143
6	36543652	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.136364
6	36543664	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.136364
6	36543753	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.545455
6	36543833	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.590909
6	36543837	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.230769
6	36543838	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0769231
6	36543876	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.178571
6	36543880	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.178571
6	36543884	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.115385
6	36543906	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.16
6	36543907	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.153846
6	36544700	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.1
6	36544701	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.333333
6	36544704	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0952381
6	36544750	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.26087
6	36544760	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0952381
6	36544772	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.133333
6	36544777	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.2
6	36544828	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0645161
6	36544864	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.09375
6	36544868	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.115385
6	36544869	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.115385
6	36545033	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.266667
6	36545045	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.636364
6	36545046	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.2
6	36545055	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.363636
6	36606093	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	36606126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
6	36733264	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	36974993	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.5
6	36974994	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.583333
6	37840351	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	37857086	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	37874810	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	37892396	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.2
6	37901559	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	41277984	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.391304
6	41277987	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.363636
6	41278050	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.15
6	41278054	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0625
6	41278062	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.125
6	41278070	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.117647
6	41278129	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.05
6	41278153	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.136364
6	41278201	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0892857
6	41278221	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.135593
6	41278410	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0530303
6	41278425	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0265487
6	41278448	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.121739
6	41278505	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.162162
6	41278513	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0571429
6	41278541	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.25
6	41278549	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.05
6	41278561	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.297297
6	41278564	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0512821
6	41278565	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.435897
6	42937402	A->G	+	ENSG00000137161	CNPY3	protein_coding	Intergenic	.	.	Alu	0.2
6	42940329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
6	42941282	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.153846
6	42941306	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0909091
6	42941364	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0416667
6	42941381	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.125
6	42941390	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0714286
6	42941416	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.037037
6	42941443	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0338983
6	42941506	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0512821
6	42941618	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.217391
6	42941838	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.363636
6	42941898	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.235294
6	42941946	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0714286
6	42942349	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.08
6	42942440	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.333333
6	42942878	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0416667
6	42942901	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0344828
6	42942902	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0350877
6	42943043	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.222222
6	42943103	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.8
6	42943216	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0789474
6	42943374	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.107143
6	43029778	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.3
6	43030973	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.210526
6	43031206	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.181818
6	43031938	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.235294
6	43031944	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.176471
6	43032313	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.153846
6	43032314	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.833333
6	43032331	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.545455
6	43032334	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.166667
6	43032368	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.272727
6	43032369	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.363636
6	43032374	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.181818
6	43032696	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1875
6	53323993	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.272727
6	57098295	A->G	+	ENSG00000112200	ZNF451	protein_coding	Intergenic	.	.	Alu	0.230769
6	72806375	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.416667
6	72806376	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.25
6	73423310	A->G	-	ENSG00000164430	CGAS	protein_coding	Intergenic	.	.	Alu	0.181818
6	73449232	A->G	-	ENSG00000164430	CGAS	protein_coding	Intergenic	.	.	Alu	0.2
6	73513926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	73514437	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
6	73514587	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
6	73514862	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0487805
6	75636966	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.181818
6	75637014	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.181818
6	75638829	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.153846
6	75638984	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.166667
6	83869614	A->G	+	ENSG00000065615	CYB5R4	protein_coding	Intergenic	.	.	Alu	0.230769
6	83869628	A->G	+	ENSG00000065615	CYB5R4	protein_coding	Intergenic	.	.	Alu	0.153846
6	85625658	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0952381
6	85625659	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.142857
6	85633544	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.111111
6	87158412	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.363636
6	87158553	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.307692
6	87159740	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87159741	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87237315	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87673223	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	87673258	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
6	87673289	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
6	87673758	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
6	87674180	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
6	87674202	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
6	87683919	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.130435
6	87688116	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.107143
6	87688228	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.1
6	87688296	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	87688325	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.210526
6	87688580	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.384615
6	87688583	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.529412
6	87688634	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.347826
6	87688655	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.323529
6	87688706	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.0645161
6	87688707	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.125
6	87688740	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.125
6	89330622	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.2
6	89339975	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.3
6	89339977	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.4
6	89384417	A->G	-	ENSG00000025039	RRAGD	protein_coding	Intergenic	.	.	Alu	0.3
6	90283851	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.4
6	99405773	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.117647
6	99417740	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.105263
6	99417745	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.1
6	99418336	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.25
6	99422762	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.272727
6	99427983	A->G	+	ENSG00000228506	AL513550.1	antisense	Intergenic	.	.	Alu	0.2
6	99428037	A->G	+	ENSG00000228506	AL513550.1	antisense	Intergenic	.	.	Alu	0.230769
6	99428091	A->G	+	ENSG00000228506	AL513550.1	antisense	Intergenic	.	.	Alu	0.363636
7	17926675	A->G	-	ENSG00000071189	SNX13	protein_coding	Intergenic	.	.	Alu	0.166667
7	18296643	A->G	+	ENSG00000048052	HDAC9	protein_coding	Intergenic	.	.	Alu	0.277778
7	18296694	A->G	+	ENSG00000048052	HDAC9	protein_coding	Intergenic	.	.	Alu	0.15
7	18297546	A->G	+	ENSG00000048052	HDAC9	protein_coding	Intergenic	.	.	Alu	0.230769
7	23187772	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.2
7	23187781	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.2
7	23187789	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.272727
7	23187803	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.25
7	23509969	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.142857
7	23512297	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.3
7	23512359	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.9
7	23512360	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.8
7	23512372	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.5
7	26154654	A->G	+	ENSG00000050344	NFE2L3	protein_coding	Intergenic	.	.	Alu	0.2
7	26204838	A->G	+	ENSG00000122565	CBX3	protein_coding	Intergenic	.	.	Alu	0.2
7	32504935	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.454545
7	32505451	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.2
7	32505498	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.230769
7	32876726	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.133333
7	32876773	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.181818
7	32876793	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32885149	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.166667
7	33056940	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.2
7	33056949	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.416667
7	33056986	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.4
7	33057304	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.181818
7	33057305	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.166667
7	35813643	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
7	36510257	A->G	-	.	.	.	Intergenic	.	.	Alu	0.145455
7	36537581	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.153846
7	36537594	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.166667
7	37742479	A->G	+	ENSG00000187037	GPR141	protein_coding	Intergenic	.	.	Alu	0.0967742
7	37742790	A->G	+	ENSG00000187037	GPR141	protein_coding	Intergenic	.	.	Alu	0.409091
7	37742804	A->G	+	ENSG00000187037	GPR141	protein_coding	Intergenic	.	.	Alu	0.4
7	43615366	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.2
7	44608287	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.105263
7	44625152	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.615385
7	44625204	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44625205	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.111111
7	44625912	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.8
7	44831055	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0714286
7	44831104	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0294118
7	44831160	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0322581
7	44833193	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0253165
7	44833224	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0375
7	44833335	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0625
7	44833381	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.08
7	44833624	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0428571
7	44833632	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0649351
7	44837174	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.272727
7	44837175	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.272727
7	44837642	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.272727
7	44837651	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44837689	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44838459	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	48092591	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.3
7	48093983	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.461538
7	48093984	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.384615
7	48094313	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.2
7	48094345	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.3
7	48094381	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.454545
7	50336881	A->G	+	ENSG00000185811	IKZF1	protein_coding	Intergenic	.	.	Alu	0.461538
7	55455415	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.272727
7	55459554	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.307692
7	55459610	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.285714
7	55459620	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.285714
7	55459621	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.214286
7	56010740	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	56052911	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.181818
7	56053474	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.25
7	56105558	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.125
7	56105573	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.214286
7	56105620	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.2
7	65978364	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.181818
7	65978522	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.214286
7	65978523	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.133333
7	65978933	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.272727
7	66155720	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.181818
7	66155747	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.25
7	66155772	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.272727
7	66155775	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.307692
7	66155789	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.3
7	66155811	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.384615
7	66157542	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.2
7	66590623	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.529412
7	66681007	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.5
7	66681514	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66681663	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.176471
7	66683853	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66684324	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66684337	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.363636
7	66684350	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.25
7	66741729	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.384615
7	66741731	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.461538
7	66742660	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66744937	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1
7	66746403	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66746404	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.272727
7	66746959	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66754482	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66782550	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66785715	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66785753	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.5
7	66785815	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66786462	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0740741
7	66786503	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0714286
7	66786533	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0869565
7	66786543	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.130435
7	66786578	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0769231
7	66787106	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66787525	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.25
7	66787528	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66787573	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66843727	A->G	-	ENSG00000230583	GTF2IRD1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	66843729	A->G	-	ENSG00000230583	GTF2IRD1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	66844139	A->G	-	ENSG00000230583	GTF2IRD1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	66844184	A->G	-	ENSG00000230583	GTF2IRD1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0769231
7	66844198	A->G	-	ENSG00000230583	GTF2IRD1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0740741
7	73539058	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.4
7	73714599	A->G	-	ENSG00000106089	STX1A	protein_coding	Intergenic	.	.	Alu	0.142857
7	73714650	A->G	-	ENSG00000106089	STX1A	protein_coding	Intergenic	.	.	Alu	0.2
7	74785627	A->G	+	ENSG00000158517	NCF1	protein_coding	Intergenic	.	.	Alu	0.25
7	74785628	A->G	+	ENSG00000158517	NCF1	protein_coding	Intergenic	.	.	Alu	0.166667
7	74785763	A->G	+	ENSG00000158517	NCF1	protein_coding	Intergenic	.	.	Alu	0.25
7	74786516	A->G	+	ENSG00000158517	NCF1	protein_coding	Intergenic	.	.	Alu	0.307692
7	74786526	A->G	+	ENSG00000158517	NCF1	protein_coding	Intergenic	.	.	Alu	0.636364
7	75106071	A->G	+	ENSG00000174428	GTF2IRD2B	protein_coding	Intergenic	.	.	Alu	0.6
7	77555660	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.230769
7	77557079	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.272727
7	77557244	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.133333
7	77566467	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.272727
7	77575423	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.4
7	77594713	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.25
7	99378159	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.333333
7	99490427	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.125
7	99497701	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.285714
7	99497739	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.2
7	99497810	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.684211
7	99497848	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.315789
7	99563552	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.0952381
7	99563553	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.0952381
7	99566673	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.272727
7	99566690	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.416667
7	99566738	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.153846
7	99566742	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.133333
7	99566746	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.142857
7	99566790	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.166667
7	99566807	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.2
7	99568982	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.2
8	11822623	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.307692
8	11822710	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.181818
8	11849756	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11850175	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0909091
8	11850176	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.173913
8	11850177	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.125
8	11850236	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.2
8	11850256	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11851805	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.2
8	11851868	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.375
8	11851870	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.1875
8	11852186	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.2
8	11852259	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.363636
8	11852278	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.153846
8	11854565	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.153846
8	11854569	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.2
8	11855053	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.157895
8	11855120	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11855409	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.347826
8	11855412	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0952381
8	11855413	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0952381
8	11855474	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.666667
8	11855475	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.142857
8	11855477	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.133333
8	11855883	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0952381
8	11855909	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0769231
8	11856397	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.241379
8	11856426	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.4
8	11856587	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11857148	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0625
8	11857161	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.2
8	11857162	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.2
8	11857172	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.133333
8	11857175	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.310345
8	11857183	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0857143
8	11857249	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.04
8	11857260	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.125
8	11857264	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0652174
8	11858387	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11858433	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.176471
8	11858493	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0555556
8	11858541	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0606061
8	11858562	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0909091
8	11858565	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.0434783
8	11864866	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.025974
8	16187276	A->G	-	ENSG00000038945	MSR1	protein_coding	Intergenic	.	.	Alu	0.2
8	16187277	A->G	-	ENSG00000038945	MSR1	protein_coding	Intergenic	.	.	Alu	0.4
8	17973509	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.2
8	18074852	A->G	-	ENSG00000104763	ASAH1	protein_coding	Intergenic	.	.	Alu	0.529412
8	22106307	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
8	22609895	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.230769
8	22631380	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.176471
8	22632951	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.25
8	22633213	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.0967742
8	22633222	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.103448
8	22633225	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.0967742
8	22633226	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.0645161
8	22633298	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.111111
8	22661495	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.181818
8	23041308	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.363636
8	23041336	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.3
8	23041413	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.142857
8	23041422	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.133333
8	23062283	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.272727
8	23062289	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.153846
8	23062491	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.3
8	23066651	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.142857
8	23066662	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.142857
8	23066663	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.230769
8	23066664	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.230769
8	23066775	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.428571
8	23066785	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.230769
8	23067116	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.7
8	23067117	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.2
8	23189109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
8	25186406	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.184211
8	25186455	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0461538
8	25186477	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0943396
8	25186478	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0566038
8	25186599	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0714286
8	25186613	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0810811
8	25186640	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0526316
8	25186653	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0526316
8	25186922	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.147059
8	25186971	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0769231
8	25186974	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.105263
8	25187062	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.1
8	25187115	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.368421
8	25192522	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	25192523	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.133333
8	25192605	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0645161
8	25192606	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.16129
8	25193684	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0952381
8	25197815	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.307692
8	25197825	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.230769
8	25197951	A->G	-	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.2
8	25198309	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.533333
8	25198333	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.1875
8	25198389	A->G	-	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.285714
8	25198452	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.285714
8	25198475	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0909091
8	25198489	A->G	-	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.181818
8	25198516	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.277778
8	25198520	A->G	-	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.2
8	25198528	A->G	-	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.4
8	25229402	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	26309123	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	27337301	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.166667
8	27341813	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.166667
8	27341815	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.181818
8	27350856	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.0714286
8	30081530	A->G	-	ENSG00000133872	SARAF	protein_coding	Intergenic	.	.	Alu	1
8	30178865	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.333333
8	37857738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
8	37865019	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	37865020	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	37866091	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.157895
8	37866106	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.1
8	37875969	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.166667
8	37876029	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.125
8	37876032	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	37876083	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.157895
8	37876132	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.12
8	37876173	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.166667
8	37876821	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.133333
8	37876883	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.166667
8	37878782	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	37879823	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.117647
8	37879842	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.181818
8	37880702	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0517241
8	37884336	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0512821
8	37884349	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	37884526	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.031746
8	37884622	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.047619
8	37884680	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	37884791	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0625
8	37884795	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	37887468	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.111111
8	37888231	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	37888244	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	37888388	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.105263
8	37888595	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.05
8	37889851	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0666667
8	37889852	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.1875
8	37889869	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.117647
8	37889881	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	37889948	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.125
8	37890718	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.047619
8	37890723	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.421053
8	37890729	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.131579
8	37893276	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0512821
8	37893307	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0714286
8	37893566	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0519481
8	37893602	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.030303
8	37893774	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.117647
8	37893782	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.291667
8	37894854	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	37894888	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	37895017	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.137931
8	37896162	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	37898319	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.130435
8	37898505	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.111111
8	38140461	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.3
8	38217554	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
8	38217555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
8	38217588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
8	38218730	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38218732	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
8	38377384	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.3
8	38377421	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.166667
8	38377422	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.545455
8	38388137	A->G	+	ENSG00000165046	LETM2	protein_coding	Intergenic	.	.	Alu	0.461538
8	38388145	A->G	+	ENSG00000165046	LETM2	protein_coding	Intergenic	.	.	Alu	0.5
8	38388180	A->G	+	ENSG00000165046	LETM2	protein_coding	Intergenic	.	.	Alu	0.176471
8	38388181	A->G	+	ENSG00000165046	LETM2	protein_coding	Intergenic	.	.	Alu	0.125
8	38388219	A->G	+	ENSG00000165046	LETM2	protein_coding	Intergenic	.	.	Alu	0.153846
8	38388263	A->G	+	ENSG00000165046	LETM2	protein_coding	Intergenic	.	.	Alu	0.454545
8	38388289	A->G	+	ENSG00000165046	LETM2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38821043	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	38821045	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	38831608	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.153846
8	39020030	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.181818
8	39020036	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.25
8	39020074	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.266667
8	39020077	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.285714
8	39020138	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.3
8	39021302	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.5
8	39021338	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.153846
8	39021429	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.153846
8	39021436	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.142857
8	39021545	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.166667
8	39021547	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.25
8	39021552	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.666667
8	39021558	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.133333
8	39021564	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.214286
8	41616435	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.2
8	42045721	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.153846
8	42047610	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.105263
8	42047638	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.125
8	43124600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121951
8	43130031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.108108
8	52672664	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52674681	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.153846
8	52696967	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52702499	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.318182
8	52708991	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.315789
8	52709168	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	52710077	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.454545
8	55887177	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55887684	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0606061
8	55887862	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0384615
8	55889275	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55889431	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55890805	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55890893	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55890918	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.5
8	55890943	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.6
8	55890944	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.272727
8	55891284	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0526316
8	55892299	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55892316	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0606061
8	55895526	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.119048
8	55895528	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.131579
8	55897650	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55897705	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55897721	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.454545
8	55897730	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55897766	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55897771	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55897792	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55897802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.444444
8	55897806	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.4
8	55897854	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55898352	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55898498	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55898523	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55898524	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55898889	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.08
8	55902085	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55902137	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55903745	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55903832	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55903869	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55903873	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55906522	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55907676	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.235294
8	55907685	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.4
8	55907702	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.384615
8	55908325	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55908374	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55908386	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55908390	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55908454	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55916922	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.454545
8	55917327	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55917352	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55922121	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.428571
8	55922165	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.277778
8	55922205	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55922304	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55922342	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55924921	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55928210	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55932475	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55932521	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55932522	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55964266	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55965861	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55965998	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.285714
8	55966074	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55966573	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.583333
8	55966611	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.222222
8	55966630	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55986089	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55986781	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.230769
8	55986908	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
8	55987260	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
8	55987262	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	58654438	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.181818
8	58657906	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.375
8	58657921	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.333333
8	58658582	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.173913
8	60532663	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.133333
8	60532730	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.105263
8	60533761	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
8	60533769	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.25
8	60533770	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
8	60585382	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.272727
8	60588202	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
8	60589981	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.4
8	60590079	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
8	63181566	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.52381
8	65820334	A->G	-	ENSG00000205268	PDE7A	protein_coding	Intergenic	.	.	Alu	0.181818
8	65820658	A->G	-	ENSG00000205268	PDE7A	protein_coding	Intergenic	.	.	Alu	0.1
8	65820668	A->G	-	ENSG00000205268	PDE7A	protein_coding	Intergenic	.	.	Alu	0.2
8	70578438	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.4
8	70578447	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.3
8	89774574	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0508475
8	89781447	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0465116
8	89781466	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.176471
8	89781467	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0384615
8	89782009	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.134328
8	89782060	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0517241
8	89782075	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0645161
8	89782527	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0980392
8	89782573	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.125
8	89964989	A->G	-	ENSG00000104320	NBN	protein_coding	Intergenic	.	.	Alu	0.416667
8	89964998	A->G	-	ENSG00000104320	NBN	protein_coding	Intergenic	.	.	Alu	0.583333
8	89965032	A->G	-	ENSG00000104320	NBN	protein_coding	Intergenic	.	.	Alu	0.181818
8	89968023	A->G	-	ENSG00000104320	NBN	protein_coding	Intergenic	.	.	Alu	0.1
8	89968202	A->G	-	ENSG00000104320	NBN	protein_coding	Intergenic	.	.	Alu	0.272727
8	97729219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0363636
8	97729701	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
8	97729771	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
8	97729774	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
9	19112464	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.2
9	19112465	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.2
9	19112466	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.181818
9	19113954	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.111111
9	19113970	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.117647
9	19114050	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.181818
9	19114572	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.0666667
9	19114581	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intergenic	.	.	Alu	0.0666667
9	33035186	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.105263
9	33035196	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.222222
9	33035225	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.238095
9	33035227	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.105263
9	33035307	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	33035549	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	33035650	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.294118
9	33035669	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.307692
9	33036072	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	33037479	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	33037486	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0689655
9	33074579	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.181818
9	33165232	A->G	-	ENSG00000086062	B4GALT1	protein_coding	Intergenic	.	.	Alu	0.125
9	33308068	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.117647
9	33308079	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.176471
9	33819805	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.04
9	33819841	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.031746
9	33819879	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.0377358
9	33821854	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.230769
9	33822686	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.142857
9	33822687	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.214286
9	33822699	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.235294
9	33827582	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.181818
9	33827585	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.454545
9	33829012	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.3
9	34183827	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.230769
9	34183883	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.411765
9	34183900	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34183906	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.222222
9	34183910	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	34183970	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	34185195	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.5
9	34185196	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.7
9	34185474	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	34191335	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	34230922	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.5
9	34230923	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.6
9	34681736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
9	35491733	A->G	+	ENSG00000198853	RUSC2	protein_coding	Intergenic	.	.	Alu	0.125
9	35491766	A->G	+	ENSG00000198853	RUSC2	protein_coding	Intergenic	.	.	Alu	0.153846
9	35513495	A->G	+	ENSG00000198853	RUSC2	protein_coding	Intergenic	.	.	Alu	0.2
9	35696391	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	35696413	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	36155840	A->G	+	ENSG00000122694	GLIPR2	protein_coding	Intergenic	.	.	Alu	0.4
9	37160300	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.181818
9	37160462	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.181818
9	37886974	A->G	-	ENSG00000122696	SLC25A51	protein_coding	Intergenic	.	.	Alu	0.117647
9	42351483	A->G	+	ENSG00000275649	AL445584.2	lincRNA	Intergenic	.	.	Alu	0.3
9	73154556	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0277778
9	73154578	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0204082
9	76461686	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	83673495	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.153846
9	83673940	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0555556
9	83674026	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0888889
9	83697071	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.166667
9	83705319	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.166667
9	83705337	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.117647
9	83705387	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0909091
9	83705388	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0909091
9	83705394	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.222222
9	85543931	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	85543932	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	85544066	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
9	85544511	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
9	85544517	A->G	-	.	.	.	Intergenic	.	.	Alu	0.642857
9	85544524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
9	85544538	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
9	85675774	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	85675807	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	85724165	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.125
9	86321989	A->G	-	ENSG00000083223	TUT7	protein_coding	Intergenic	.	.	Alu	0.3
9	91294382	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.466667
9	91294404	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.142857
9	91294436	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.181818
9	93473380	A->G	+	ENSG00000048828	FAM120A	protein_coding	Intergenic	.	.	Alu	0.0909091
9	96644663	A->G	-	ENSG00000158122	AAED1	protein_coding	Intergenic	.	.	Alu	0.2
9	98068209	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.2
9	98068215	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.4
10	11239803	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.2
10	11239804	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.3
10	11239889	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.166667
10	11239892	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.214286
10	11241220	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.142857
10	11241223	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.142857
10	11241239	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.384615
10	13298601	A->G	-	ENSG00000107537	PHYH	protein_coding	Intergenic	.	.	Alu	0.25
10	13300463	A->G	+	ENSG00000107537	PHYH	protein_coding	Intergenic	.	.	Alu	0.2
10	14552619	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.142857
10	14575300	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.107143
10	14581808	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0526316
10	14582545	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.125
10	14582552	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.409091
10	14582554	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.130435
10	14582555	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0909091
10	14582556	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.136364
10	14582561	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0952381
10	14582649	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0789474
10	14582658	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.459459
10	14582821	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0588235
10	14582829	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0588235
10	14582894	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.25
10	14583000	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.2
10	14594289	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0272727
10	14594388	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0681818
10	14594409	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0526316
10	14595523	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0833333
10	14597781	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.025
10	14597784	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.025641
10	14599635	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0212766
10	14599637	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0531915
10	14600742	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0540541
10	14600904	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0283688
10	14907145	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	17216999	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.0652174
10	17217077	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.027027
10	17217345	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.0666667
10	17318764	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.3125
10	17318822	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.2
10	17318823	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.32
10	17318825	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.16
10	17319162	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.1
10	17319174	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.285714
10	17319195	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.125
10	17319243	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.266667
10	17319247	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.1875
10	17319254	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.2
10	17319272	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.882353
10	17319287	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.214286
10	17319294	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.833333
10	17319297	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.176471
10	17319306	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.333333
10	17448043	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0769231
10	17448076	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0869565
10	17448080	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.2
10	17492762	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
10	17492817	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	17492912	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
10	17686339	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.210526
10	17686446	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.25
10	17686476	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.4
10	17686651	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.9
10	17687377	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.142857
10	19823950	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.307692
10	19823953	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.142857
10	19846818	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.130435
10	19849623	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.25
10	21875108	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.4
10	21875320	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	21877150	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21877198	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21968675	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.363636
10	21968715	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	21969137	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.125
10	21969141	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.333333
10	23443569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
10	23446774	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
10	23446779	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
10	23446799	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
10	23446829	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
10	26449829	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.117647
10	26760627	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.545455
10	26761083	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.230769
10	26761107	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.176471
10	26761121	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26761122	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.1
10	26761141	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.5
10	26761190	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.117647
10	26761195	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.111111
10	26761217	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.416667
10	26772870	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	26772977	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	26852474	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	27141313	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.111111
10	27143125	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.166667
10	27143213	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.111111
10	27143269	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.4
10	27160489	A->G	+	ENSG00000120539	MASTL	protein_coding	Intergenic	.	.	Alu	0.5
10	27514844	A->G	+	ENSG00000099246	RAB18	protein_coding	Intergenic	.	.	Alu	0.166667
10	28325180	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.333333
10	28333247	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.0540541
10	28333283	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.0408163
10	28333284	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.0416667
10	28334013	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.105263
10	28334020	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.111111
10	28539557	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.333333
10	28548999	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0769231
10	28564144	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.285714
10	28564184	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.357143
10	28564257	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.142857
10	30439688	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.046875
10	30439689	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0307692
10	30439764	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.027027
10	30998351	A->G	-	ENSG00000183621	ZNF438	protein_coding	Intergenic	.	.	Alu	0.1875
10	32016647	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.2
10	43142413	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.0645161
10	43142454	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.0740741
10	43142476	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.0625
10	43146615	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.0540541
10	43146627	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.225806
10	43146650	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.111111
10	43149334	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.1875
10	43149882	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.142857
10	43149907	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.166667
10	43165940	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.125
10	43171603	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.142857
10	43403264	A->G	-	ENSG00000169813	HNRNPF	protein_coding	Intergenic	.	.	Alu	0.3
10	43435671	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
10	43436143	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
10	43438319	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.133333
10	43438325	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.142857
10	43438375	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.142857
10	43438446	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.08
10	43440153	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.142857
10	43440182	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.3
10	43440970	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.142857
10	43442181	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.153846
10	43449780	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.166667
10	43449784	A->G	+	ENSG00000243660	ZNF487	protein_coding	Intergenic	.	.	Alu	0.2
10	45728072	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.4
10	45728153	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.181818
10	45728282	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.0833333
10	45728303	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.178571
10	45728306	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.285714
10	45975283	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.733333
10	46004042	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
10	49946028	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.357143
10	49946030	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.142857
10	50068811	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.2
10	58253472	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.125
10	58345074	A->G	+	ENSG00000072401	UBE2D1	protein_coding	Intergenic	.	.	Alu	0.142857
10	61908530	A->G	+	ENSG00000150347	ARID5B	protein_coding	Intergenic	.	.	Alu	0.153846
10	61917030	A->G	+	ENSG00000150347	ARID5B	protein_coding	Intergenic	.	.	Alu	0.2
10	63179570	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.25
10	63179585	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63192481	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.1
10	63192625	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0833333
10	63204063	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.147059
10	63204118	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0681818
10	63205906	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0531915
10	63205944	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0338983
10	63220999	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.15
10	63231549	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.15
10	63231576	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0740741
10	63231596	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0952381
10	63231678	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.222222
10	63231711	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.125
10	63231712	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.125
10	63231943	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.117647
10	63231970	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0833333
10	63250057	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.105263
10	63260704	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.214286
10	63260794	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.105263
10	63260820	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.631579
10	63260846	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.1875
10	63261325	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0454545
10	63261328	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0465116
10	63261332	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63261335	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.139535
10	63261498	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0740741
10	63261529	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63263820	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0769231
10	67886123	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.111111
10	67886126	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.307692
10	67886359	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67886411	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.666667
10	67886497	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67890195	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67890197	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.3
10	67890612	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.117647
10	67890626	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.133333
10	67894839	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	68975682	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.2
10	69087365	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	69094644	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0526316
10	69094645	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0769231
10	69094692	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.139535
10	69094706	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0465116
10	69094718	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0540541
10	69095161	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.046875
10	69095210	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0625
10	69099375	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.209302
10	69099418	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0681818
10	69099514	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0769231
10	69099540	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0465116
10	69099889	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0566038
10	69099969	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0512821
10	69100011	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0384615
10	69100098	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.12
10	69100099	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0576923
10	69100331	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0789474
10	69100339	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0512821
10	69103119	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.1
10	69103201	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.192308
10	69103213	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0869565
10	71758771	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.142857
10	71849501	A->G	-	ENSG00000197746	PSAP	protein_coding	Intergenic	.	.	Alu	0.0555556
10	72296897	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
10	72296914	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
10	72623776	A->G	-	ENSG00000107745	MICU1	protein_coding	Intergenic	.	.	Alu	0.2
10	73776271	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.105263
10	73776283	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0952381
10	73776953	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.25
10	73776955	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0909091
10	73777624	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.117647
10	73777735	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.181818
10	73777738	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.272727
10	75217074	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.166667
10	75217135	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.181818
10	75217177	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.181818
10	75217426	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.214286
10	75435965	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.0606061
10	75435979	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.0714286
10	75436680	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.272727
10	75444942	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.142857
10	75444975	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.238095
10	75445022	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.238095
10	75445041	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.294118
10	75445058	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.133333
10	75445070	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75447405	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
10	75447406	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.363636
10	75447432	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.266667
10	75447713	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.0645161
10	75456876	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.153846
10	75456885	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.153846
10	75470313	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75470318	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75526151	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75526152	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75551775	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75551784	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.307692
10	75589552	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.4
10	75590887	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75591177	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.133333
10	75680754	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75690323	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.533333
10	75690345	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.153846
10	75690544	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.636364
10	75690575	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75690576	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.9
10	75691978	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.0909091
10	75748303	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75822848	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	79093570	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.0769231
10	87072210	A->G	-	ENSG00000148672	GLUD1	protein_coding	Intergenic	.	.	Alu	0.2
10	87075254	A->G	-	ENSG00000148672	GLUD1	protein_coding	Intergenic	.	.	Alu	0.133333
10	87096516	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.166667
10	87096519	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.2
10	87097329	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.272727
10	87104861	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.25
10	87871519	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0833333
10	87871551	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.157895
10	87871595	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.142857
10	87871599	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.172414
10	87871660	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.235294
10	87871661	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.1875
10	87871666	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.3125
10	87871680	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.142857
10	87871764	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0740741
10	87873062	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.1
10	87873095	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0638298
10	87873112	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0555556
10	87873115	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.111111
10	87873118	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.109091
10	87873127	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0357143
10	87873173	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0638298
10	87873192	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0425532
10	87890845	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.15
10	87890846	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.1
10	87890890	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.230769
10	87890959	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.1
10	87895042	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.15
10	89331449	A->G	+	ENSG00000119917	IFIT3	protein_coding	Intergenic	.	.	Alu	0.153846
10	89721410	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.454545
10	91942163	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.3
10	91953511	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.35
10	96563214	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.176471
10	96655385	A->G	-	ENSG00000155629	PIK3AP1	protein_coding	Intergenic	.	.	Alu	0.230769
10	96655424	A->G	-	ENSG00000155629	PIK3AP1	protein_coding	Intergenic	.	.	Alu	0.142857
10	96847621	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.272727
10	96847630	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.363636
10	96847704	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.166667
10	97352921	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
10	97374204	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.179487
10	97374205	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0506329
10	97374207	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0240964
10	97374212	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.525641
10	97374227	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.103896
10	97374242	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.05
10	97374306	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.385965
10	97374334	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0833333
10	97374338	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.404255
10	97374339	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.326531
10	97374340	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.102041
10	97374380	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0909091
10	97374385	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97374648	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.307692
10	97374650	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.4
10	97374728	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.192308
10	97374731	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.444444
10	97374733	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.269231
10	97374766	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.25
10	97375232	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.12
10	97375303	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.125
10	97375323	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0606061
10	97375330	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.105263
10	97375347	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.113636
10	97375350	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.232558
10	97375370	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0392157
10	97375376	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.192308
10	97375377	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.111111
10	97375938	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.08
10	97375955	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0833333
10	97375992	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0555556
10	97376076	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.206897
10	97376077	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0714286
10	97376097	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.103448
10	97376275	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	97376282	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97376384	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0740741
10	97376418	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0769231
10	97376423	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0425532
10	97376442	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.037037
10	97376462	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.127273
10	97377254	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.116279
10	97377272	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.075
10	97377334	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.08
10	97377413	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.62963
10	97377417	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.25
10	97377446	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0810811
10	97377453	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0731707
10	97377477	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.172414
10	97377485	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.111111
10	97377588	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.136364
10	97377610	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.157895
10	97377719	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97377792	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.363636
10	97377797	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97378612	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0526316
10	97378613	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0526316
10	97378700	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.111111
10	97378708	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0952381
10	97378774	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.111111
10	97386454	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0869565
10	97386455	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0869565
10	97386463	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0909091
10	97386477	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.45
10	97386797	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.157895
10	97386801	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.461538
10	97387903	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	97392069	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97392079	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97394510	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.333333
10	97394641	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	97394671	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.384615
10	97394994	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.111111
10	97394999	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.125
10	97396862	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	97396893	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.133333
10	97396903	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.117647
10	97397715	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.0869565
10	97397775	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.6
10	97397835	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.230769
10	97397901	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97398491	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.181818
10	97398563	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.3
10	97399667	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97399912	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.117647
11	10278578	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.181818
11	11892426	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.166667
11	11892440	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.166667
11	11892582	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
11	11892633	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.166667
11	11892741	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
11	11894335	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.181818
11	13682742	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.214286
11	13682832	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0714286
11	13683137	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.315789
11	13683272	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0769231
11	13683299	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.233333
11	13683375	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.08
11	13703213	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.133333
11	13703258	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.178571
11	13703263	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0714286
11	13703323	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.190476
11	13703331	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.25
11	14478731	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.2
11	16756369	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.214286
11	16756529	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.142857
11	16756695	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.166667
11	17076645	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.190476
11	17335174	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	18514024	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.363636
11	18525128	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.25
11	33266497	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	33266549	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	33266652	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.178571
11	33267203	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33267223	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.176471
11	33267252	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33267970	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.363636
11	33268150	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	33270165	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33270184	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33285846	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	33285852	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	34076792	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.7
11	34076808	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
11	34076810	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.5
11	34076874	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.538462
11	34076880	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.25
11	34441598	A->G	+	ENSG00000121691	CAT	protein_coding	Intergenic	.	.	Alu	0.0769231
11	34441603	A->G	+	ENSG00000121691	CAT	protein_coding	Intergenic	.	.	Alu	0.0740741
11	34441691	A->G	+	ENSG00000121691	CAT	protein_coding	Intergenic	.	.	Alu	0.08
11	34441714	A->G	+	ENSG00000121691	CAT	protein_coding	Intergenic	.	.	Alu	0.259259
11	35187023	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0434783
11	35187137	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0588235
11	35187176	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0454545
11	35187939	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.046875
11	35187940	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0381679
11	35187944	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.031746
11	35188817	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0273973
11	35188834	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.025974
11	35212877	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.2
11	35212941	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.181818
11	35213553	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.117647
11	35216806	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.137931
11	35218722	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.230769
11	35218723	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.384615
11	36486241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
11	36486311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
11	36486314	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	36486872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
11	36486904	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
11	36487008	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	43324494	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.2
11	43324495	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.181818
11	43682365	A->G	+	ENSG00000283341	AC068205.2	processed_transcript	Intergenic	.	.	Alu	0.3
11	44589048	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.227273
11	44589070	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.0909091
11	44589136	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.272727
11	44589201	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.142857
11	44589205	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.142857
11	45864682	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.5
11	45864940	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.181818
11	45865012	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.2
11	46620134	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.181818
11	47168798	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
11	47169766	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
11	47169774	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.3
11	47170889	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47363834	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47366709	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47368313	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.230769
11	47372363	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.105263
11	47373118	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.125
11	47373482	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.08
11	47480265	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1875
11	47480269	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1875
11	47480342	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47482011	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47482081	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47482095	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
11	47482157	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47519368	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47520995	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47521973	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3
11	47525567	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.230769
11	47529599	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47536596	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47536599	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47550419	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.117647
11	47550448	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.15
11	47740032	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.25
11	47740636	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47740921	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.125
11	47740927	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.117647
11	47740985	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.142857
11	47740986	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.133333
11	47747912	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.214286
11	47763281	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.4
11	47763729	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.181818
11	47763772	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.428571
11	47763773	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.571429
11	47984615	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.166667
11	47986535	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.117647
11	47986548	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.411765
11	47986560	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.235294
11	47986646	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.214286
11	47986658	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.176471
11	47986960	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.0869565
11	47986996	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.227273
11	47987054	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.08
11	47993393	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.444444
11	47993397	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.315789
11	47993476	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.285714
11	60211656	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.266667
11	60211668	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.125
11	60211683	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.166667
11	60211750	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.333333
11	60211756	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.692308
11	60211813	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.357143
11	60211830	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.214286
11	60211849	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.333333
11	60212421	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.363636
11	60387041	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.137931
11	60387365	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.0731707
11	60387660	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.217391
11	60387662	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.115385
11	60387729	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.0731707
11	60387763	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.106383
11	60388910	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.37931
11	60388912	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.290323
11	61136925	A->G	-	ENSG00000167987	VPS37C	protein_coding	Intergenic	.	.	Alu	0.3
11	61364954	A->G	+	ENSG00000149483	TMEM138	protein_coding	Intergenic	.	.	Alu	0.2
11	61413124	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.3
11	61413519	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.181818
11	61413548	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.285714
11	61413555	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.230769
11	61428405	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.142857
11	62803076	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	62803077	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	62823460	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62828229	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.133333
11	62828247	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.153846
11	62829664	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.117647
11	62840072	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.1
11	62840849	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.130435
11	62841149	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.0434783
11	62841315	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.0288462
11	62886696	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.181818
11	62887554	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.4
11	64858279	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.153846
11	64859436	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.2
11	65419938	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
11	65660796	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.2
11	65772930	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
11	65772962	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
11	65772986	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0789474
11	65772992	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
11	65774483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.030303
11	65774488	A->G	-	.	.	.	Intergenic	.	.	Alu	0.032
11	65774527	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0454545
11	65774632	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0241935
11	65775819	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0583942
11	65898412	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.153846
11	66630380	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.230769
11	66630526	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66630527	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66631077	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66631764	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66631801	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66631837	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.285714
11	66631844	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66633357	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3
11	66633409	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3
11	66633484	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66633535	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3
11	66633563	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.636364
11	66633627	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.384615
11	66633634	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3
11	66634188	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0952381
11	66648660	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66648663	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.357143
11	66648667	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.285714
11	66649214	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66649424	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.1
11	66649438	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.1
11	66649489	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66841389	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.166667
11	66841956	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66842002	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.107143
11	66842120	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.125
11	66842121	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.166667
11	66842141	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66842196	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.181818
11	67123707	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67296769	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.166667
11	68045577	A->G	+	ENSG00000110719	TCIRG1	protein_coding	Intergenic	.	.	Alu	0.2
11	68837107	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.0952381
11	72715685	A->G	-	ENSG00000186635	ARAP1	protein_coding	Intergenic	.	.	Alu	0.2
11	72807923	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
11	72807924	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
11	72811704	A->G	-	.	.	.	Intergenic	.	.	Alu	0.642857
11	72811710	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
11	72811933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
11	72812016	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	72812036	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
11	72812055	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	72812077	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
11	72812089	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
11	72812150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
11	73387085	A->G	+	ENSG00000054967	RELT	protein_coding	Intergenic	.	.	Alu	0.0454545
11	73967623	A->G	-	ENSG00000255847	AP003717.1	antisense	Intergenic	.	.	Alu	0.133333
11	73967633	A->G	-	ENSG00000255847	AP003717.1	antisense	Intergenic	.	.	Alu	0.1875
11	73967645	A->G	-	ENSG00000255847	AP003717.1	antisense	Intergenic	.	.	Alu	0.352941
11	73967663	A->G	-	ENSG00000255847	AP003717.1	antisense	Intergenic	.	.	Alu	0.105263
11	73967739	A->G	-	ENSG00000255847	AP003717.1	antisense	Intergenic	.	.	Alu	0.222222
11	73979647	A->G	-	ENSG00000175567	UCP2	protein_coding	Intergenic	.	.	Alu	0.380952
11	76365591	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.2
11	76365619	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.166667
11	78330929	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.333333
11	78330939	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.3
11	78331011	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	78360782	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	78360783	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	78376869	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.230769
11	78388536	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.117647
11	78390542	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.4
11	78413988	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.105263
11	78415039	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	78415054	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	85959393	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.2
11	85959799	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.416667
11	85998666	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.111111
11	85998678	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.105263
11	85998768	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.142857
11	86037660	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.133333
11	86037666	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.117647
11	86049970	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.307692
11	86055230	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.181818
11	88328739	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.190476
11	88328792	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.125
11	88328795	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.117647
11	88328796	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.315789
11	88328828	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.166667
11	88328830	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.0833333
11	88329264	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.1875
11	88329370	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.307692
11	96328027	A->G	-	ENSG00000184384	MAML2	protein_coding	Intergenic	.	.	Alu	0.153846
12	10129756	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.0769231
12	10129782	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.125
12	10129812	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.0909091
12	10129850	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.0833333
12	10216109	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.238095
12	10216115	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.08
12	10216116	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0769231
12	10216161	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.3125
12	10216633	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.142857
12	10216670	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.1875
12	10216706	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.142857
12	10216774	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.2
12	10217590	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.105263
12	11658255	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.166667
12	11658259	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.117647
12	11658305	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11658455	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.181818
12	11661201	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.103448
12	11661228	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.142857
12	11704400	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.272727
12	22054188	A->G	+	ENSG00000111726	CMAS	protein_coding	Intergenic	.	.	Alu	0.2
12	22638369	A->G	+	ENSG00000139163	ETNK1	protein_coding	Intergenic	.	.	Alu	0.3
12	27035014	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.181818
12	27035081	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.6
12	27035125	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.454545
12	27035126	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.181818
12	31965090	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.190476
12	31965096	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.115385
12	31968961	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.111111
12	31969314	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.153846
12	31969401	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.25
12	31969445	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.166667
12	32487534	A->G	+	ENSG00000139132	FGD4	protein_coding	Intergenic	.	.	Alu	0.133333
12	32713738	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.166667
12	42522361	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42524550	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.2
12	45843479	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45970291	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.2
12	48697013	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.2
12	48705552	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.272727
12	51957539	A->G	+	ENSG00000135503	ACVR1B	protein_coding	Intergenic	.	.	Alu	0.538462
12	53458447	A->G	+	ENSG00000257379	AC023509.1	processed_transcript	Intergenic	.	.	Alu	0.117647
12	54383773	A->G	-	ENSG00000161642	ZNF385A	protein_coding	Intergenic	.	.	Alu	0.08
12	55731617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
12	55781915	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.545455
12	55781919	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	56667057	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.2
12	56680972	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.153846
12	56682825	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.2
12	57398159	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.3
12	62319179	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.214286
12	62319180	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.285714
12	62518205	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.416667
12	64612874	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.466667
12	64613677	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.333333
12	64613682	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	64630451	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.166667
12	66165490	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.166667
12	66165491	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.25
12	66166200	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.117647
12	66193959	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0294118
12	66195678	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.3
12	66195724	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.117647
12	66195759	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.25
12	66195760	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.285714
12	66195762	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	66199010	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.105263
12	66200867	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.130435
12	68615437	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0689655
12	68615438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0338983
12	68615442	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0350877
12	68615510	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.190476
12	68615538	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68615539	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.09375
12	68616511	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0588235
12	68616516	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.157895
12	68617795	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0816327
12	68617857	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0487805
12	68617947	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0377358
12	68619087	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0421053
12	68620644	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.047619
12	68620675	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.046875
12	68620680	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.030303
12	68620736	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0625
12	68620738	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0327869
12	68620744	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.037037
12	68620788	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.06
12	68620840	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0363636
12	68623946	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0869565
12	68625665	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68625666	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68625672	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0869565
12	68629056	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.146341
12	68629116	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0588235
12	68629120	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0576923
12	68629178	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0545455
12	68632853	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68633616	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0869565
12	68633660	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68636869	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0571429
12	68638691	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.217391
12	68638842	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.147059
12	68638845	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0666667
12	68638896	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0789474
12	68644868	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68646540	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68646556	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68646562	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68654684	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.444444
12	68655125	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.3
12	68655129	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.5
12	68655220	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68810078	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.272727
12	68810079	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68810111	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.181818
12	68810165	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.272727
12	68810896	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.125
12	68817494	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0555556
12	68817495	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0571429
12	68817517	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68817530	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.521739
12	68817564	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.105263
12	68817573	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.105263
12	68817574	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68817628	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.12
12	68817655	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.458333
12	68817700	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.428571
12	68817897	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.214286
12	68817898	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.419355
12	68817927	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.235294
12	68817937	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68817968	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.214286
12	68817991	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.111111
12	68818003	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0408163
12	68818023	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0425532
12	68818032	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.591837
12	68818033	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.44898
12	68818044	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.04
12	68818056	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.127273
12	68818967	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0363636
12	68821112	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.130435
12	68821148	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.269231
12	68821152	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.08
12	68821177	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.210526
12	68821213	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.684211
12	68821245	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.363636
12	68821308	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	68821445	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.222222
12	68821465	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.266667
12	68821473	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.142857
12	68821481	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.807692
12	68821521	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.352941
12	68821544	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.125
12	68821586	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.533333
12	68821616	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.4
12	68821930	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0606061
12	68821980	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.1
12	68830728	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	69243973	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.166667
12	69244036	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.4
12	69246008	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.133333
12	69256102	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.285714
12	69256139	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.230769
12	69256151	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.2
12	71615736	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.4
12	71615737	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.3
12	71615755	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.272727
12	71615764	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.4
12	71616102	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.769231
12	71657771	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.210526
12	71657786	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.130435
12	71657826	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.125
12	71658386	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.125
12	71658482	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.105263
12	71658561	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.1
12	71658568	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.263158
12	71846926	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
12	71847485	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.230769
12	71847536	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.2
12	76076844	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
12	76076893	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.263158
12	76079400	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.178571
12	76079808	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.333333
12	76079902	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.0869565
12	76079919	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.0526316
12	76080435	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.241379
12	76080538	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
12	76498915	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76549548	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76550958	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.333333
12	76556694	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.121951
12	76556760	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.105263
12	76556764	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.210526
12	76556801	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.117647
12	76556802	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.117647
12	76556906	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76556920	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.181818
12	76556936	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.142857
12	76556937	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.357143
12	76557503	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.35
12	76557532	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.176471
12	76765775	A->G	+	ENSG00000186908	ZDHHC17	protein_coding	Intergenic	.	.	Alu	0.133333
12	76765780	A->G	+	ENSG00000186908	ZDHHC17	protein_coding	Intergenic	.	.	Alu	0.176471
12	79910250	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.4
12	79926042	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.133333
12	79927093	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.111111
12	79927110	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.2
12	89642725	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0526316
12	89642783	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.195652
12	89642784	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0666667
12	89642787	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.097561
12	89643827	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0416667
12	89643845	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0612245
12	89643939	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.05
12	89644022	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0576923
12	89644029	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0416667
12	89652840	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.04
12	92112769	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.181818
12	93382868	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.2
12	93391250	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.166667
12	98596737	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	98596908	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.117647
12	98652214	A->G	+	ENSG00000120868	APAF1	protein_coding	Intergenic	.	.	Alu	0.181818
13	19710940	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.454545
13	19711466	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.2
13	19711552	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.166667
13	19711749	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.153846
13	19851087	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.0952381
13	19964485	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.4
13	19964504	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
13	21044973	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.2
13	21145538	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.133333
13	24508747	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
13	24509450	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
13	25262532	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.181818
13	25265633	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.2
13	27155455	A->G	-	ENSG00000152484	USP12	protein_coding	Intergenic	.	.	Alu	0.454545
13	27653623	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.333333
13	27653624	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.25
13	28002967	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
13	28002979	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
13	28002989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
13	28140048	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0740741
13	28149093	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.272727
13	28149135	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28149148	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28149789	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28187059	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28187065	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3125
13	28187071	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28187072	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28187743	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.307692
13	28187928	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	31757837	A->G	-	ENSG00000133105	RXFP2	protein_coding	Intergenic	.	.	Alu	0.125
13	31757849	A->G	-	ENSG00000133105	RXFP2	protein_coding	Intergenic	.	.	Alu	0.166667
13	32318522	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.153846
13	32327283	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.235294
13	32327286	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.111111
13	32327289	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.111111
13	32327290	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.117647
13	32327896	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.4
13	32327897	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.3
13	32328341	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.125
13	32525622	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.272727
13	32525623	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.272727
13	32525665	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.133333
13	40655240	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.181818
13	40930061	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
13	40930149	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
13	40937882	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.037037
13	40937945	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	40937987	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0350877
13	40938010	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.04
13	40938013	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0638298
13	40938083	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.107143
13	40939176	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0517241
13	40939177	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0517241
13	40939215	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.028169
13	40939240	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0294118
13	40946789	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0510204
13	40946879	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0408163
13	40946881	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0392157
13	40949555	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0789474
13	40949582	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.106383
13	40949597	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0638298
13	40951745	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.266667
13	40952538	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	40952543	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
13	40952544	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	40953100	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
13	40960690	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0540541
13	40978269	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0434783
13	40978270	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0425532
13	40987499	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40991528	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0689655
13	40991556	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0571429
13	40998095	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.189189
13	40998100	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0967742
13	40998111	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.192308
13	40998139	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	40998899	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0731707
13	40998900	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0714286
13	41001328	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.125
13	41010147	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0243902
13	41010203	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.102564
13	41010214	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0566038
13	41010365	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0444444
13	41010399	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0625
13	41010420	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.210526
13	41011478	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0731707
13	41011490	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0246914
13	41011552	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0571429
13	41011559	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0694444
13	41011572	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0289855
13	41011591	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0298507
13	41011735	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0377358
13	41012072	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.210526
13	41012077	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.192308
13	41012085	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.05
13	41012089	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.031746
13	41012124	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0425532
13	41012169	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	41012196	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.24
13	41012201	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.291667
13	41032323	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	41032382	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.304348
13	41032397	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	41032414	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.208333
13	41032597	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	41032658	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0740741
13	41032670	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0645161
13	41032741	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.075
13	41032742	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.25641
13	41041553	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
13	41041661	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
13	41053214	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0789474
13	41053294	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0487805
13	46135254	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.428571
13	46135858	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.0487805
13	46135863	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.0769231
13	48239425	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0434783
13	48239439	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.108108
13	48239453	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.097561
13	48239485	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.22449
13	48239528	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.031746
13	48239535	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.166667
13	48240257	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.151515
13	48240332	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0833333
13	48240347	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.3125
13	48240351	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.333333
13	48243574	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0555556
13	49262187	A->G	+	ENSG00000102543	CDADC1	protein_coding	Intergenic	.	.	Alu	0.266667
13	49262780	A->G	+	ENSG00000102543	CDADC1	protein_coding	Intergenic	.	.	Alu	0.105263
13	50005412	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.2
13	50038372	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.166667
13	50050107	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.692308
13	50050150	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.25
13	50064952	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.4
13	50113341	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.2
13	50113342	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.181818
13	50113398	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.111111
13	50113399	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.166667
13	50113818	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.25
13	50113833	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.130435
13	51598284	A->G	+	ENSG00000139668	WDFY2	protein_coding	Intergenic	.	.	Alu	0.25
13	51598300	A->G	+	ENSG00000139668	WDFY2	protein_coding	Intergenic	.	.	Alu	0.166667
13	51598962	A->G	+	ENSG00000224451	ATP5PBP1	processed_pseudogene	Intergenic	.	.	Alu	0.142857
13	51634600	A->G	+	ENSG00000139668	WDFY2	protein_coding	Intergenic	.	.	Alu	0.2
13	51634620	A->G	+	ENSG00000139668	WDFY2	protein_coding	Intergenic	.	.	Alu	0.307692
13	52630458	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.2
13	52630464	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.3
13	71804230	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.1875
13	71804231	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.1875
13	71839418	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.571429
13	71839421	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.571429
13	71843429	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	72779194	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.4
13	72779206	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.333333
13	72779248	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.2
13	72779268	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.125
13	72779326	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.142857
13	72780194	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.133333
13	77295338	A->G	-	ENSG00000005810	MYCBP2	protein_coding	Intergenic	.	.	Alu	0.153846
13	77296235	A->G	-	ENSG00000005810	MYCBP2	protein_coding	Intergenic	.	.	Alu	0.294118
13	77296272	A->G	-	ENSG00000005810	MYCBP2	protein_coding	Intergenic	.	.	Alu	0.166667
13	77296295	A->G	-	ENSG00000005810	MYCBP2	protein_coding	Intergenic	.	.	Alu	0.333333
13	79394852	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.157895
13	79394853	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.105263
13	79395718	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.166667
13	95715214	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.181818
13	95715750	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.214286
13	95716113	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.166667
13	95749598	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.8
13	99531061	A->G	+	ENSG00000125304	TM9SF2	protein_coding	Intergenic	.	.	Alu	0.363636
14	20478112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
14	20478130	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	20478131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.275862
14	20478149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.321429
14	20478156	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
14	20478219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
14	20478238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
14	20478272	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
14	20478285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.128205
14	20478301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
14	20480313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	20480336	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
14	20480337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.318182
14	20480404	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
14	20480405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.419355
14	20480406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.354839
14	20480417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
14	20480478	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
14	20480502	A->G	+	.	.	.	Intergenic	.	.	Alu	0.392857
14	20480856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.380952
14	20480894	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
14	20480946	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
14	20480963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
14	20481007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
14	20481047	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
14	20481103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
14	20782950	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	20782963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	20782976	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	20783112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
14	20783118	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
14	20783138	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
14	20783262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
14	21228671	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.25
14	21232974	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.7
14	21232975	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.7
14	21246047	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.176471
14	21246370	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.5
14	21246503	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.3
14	21248273	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.111111
14	21248277	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.117647
14	21251461	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.25
14	21252379	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0833333
14	21252408	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.266667
14	21252448	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21253117	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21256747	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.08
14	21256752	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.08
14	21265566	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0714286
14	21265737	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.137931
14	21265764	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.310345
14	21480101	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.166667
14	21480956	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.3
14	21481389	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.266667
14	21481399	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.125
14	21481413	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.133333
14	21481414	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.266667
14	21481431	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.111111
14	22914753	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.272727
14	22914791	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.285714
14	22916159	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.230769
14	22916208	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.166667
14	22916532	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.125
14	23091104	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.272727
14	23091184	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.2
14	23091381	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.2
14	23091508	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.181818
14	23091513	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.166667
14	23091518	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.2
14	31007682	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.181818
14	31018893	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.2
14	31020374	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.2
14	34532270	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.153846
14	44943988	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.153846
14	49584256	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.12
14	49834762	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.4
14	50197008	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.166667
14	50199031	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.3
14	50199146	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.181818
14	50725659	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.454545
14	50933947	A->G	-	ENSG00000100504	PYGL	protein_coding	Intergenic	.	.	Alu	0.461538
14	50933961	A->G	-	ENSG00000100504	PYGL	protein_coding	Intergenic	.	.	Alu	0.333333
14	52323331	A->G	+	ENSG00000125384	PTGER2	protein_coding	Intergenic	.	.	Alu	0.117647
14	52323522	A->G	+	ENSG00000125384	PTGER2	protein_coding	Intergenic	.	.	Alu	0.111111
14	52712692	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.583333
14	54898764	A->G	-	ENSG00000131979	GCH1	protein_coding	Intergenic	.	.	Alu	0.2
14	55055154	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.153846
14	55055168	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.153846
14	55060881	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.125
14	55060882	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.125
14	55061070	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.2
14	55135074	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.3
14	55284016	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.214286
14	55284132	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.222222
14	55284691	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.238095
14	55284755	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.185185
14	55284777	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.380952
14	55284825	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.241379
14	55285119	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.105263
14	55289558	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.15
14	55289605	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0606061
14	55289662	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.08
14	55290889	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
14	55290949	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.272727
14	55291062	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.09375
14	55291715	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0666667
14	55291716	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0666667
14	55291764	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55291780	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55291825	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.103448
14	55291827	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55292453	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.307692
14	55292499	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55292546	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55294382	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.136364
14	55294406	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55301173	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0769231
14	55304377	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55584397	A->G	+	ENSG00000126777	KTN1	protein_coding	Intergenic	.	.	Alu	0.3
14	58289919	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.133333
14	58322035	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.2
14	58748609	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
14	61710783	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.2
14	61710805	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.142857
14	61710806	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.130435
14	61710929	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0769231
14	61711279	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0851064
14	61711308	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0350877
14	61737933	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0666667
14	61738849	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0232558
14	61738876	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0229885
14	61738878	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0217391
14	61741466	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.153846
14	61741591	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.115385
14	61743083	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0625
14	61743211	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.111111
14	61743229	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.333333
14	61746516	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0416667
14	61746533	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0289855
14	64917170	A->G	+	ENSG00000258289	CHURC1	protein_coding	Intergenic	.	.	Alu	0.2
14	65078370	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.2
14	65078371	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.2
14	69696861	A->G	+	ENSG00000100647	SUSD6	protein_coding	Intergenic	.	.	Alu	0.333333
14	70921414	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.0645161
14	70930246	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.181818
14	70935338	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.166667
14	73086809	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
14	73091466	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.4
14	73143827	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.416667
14	73143830	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.25
14	73143909	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.8
14	73145986	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.142857
14	73146026	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.1
14	73146069	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.157895
14	73449245	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.363636
14	73803355	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
14	77553961	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.235294
14	77554001	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.25
14	77575664	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.3
14	89407829	A->G	-	ENSG00000258380	AL356805.1	antisense	Intergenic	.	.	Alu	0.111111
14	91000640	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.285714
14	91050160	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.266667
14	91050265	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.454545
14	91052577	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.166667
14	91055703	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.117647
14	91477787	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91479094	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.107143
14	91479121	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.1
14	91479147	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.09375
14	91479679	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0714286
14	91479828	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.214286
14	91480801	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.307692
14	91480918	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0869565
14	91480919	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.130435
14	91480983	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.15
14	91481296	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.176471
14	91502223	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91502331	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91506219	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.166667
14	91506648	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.105263
14	91506653	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91506689	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91506825	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91507156	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.133333
14	92661630	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.25
14	92662910	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.166667
14	92662914	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92662915	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92662923	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.4
14	92662985	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.3
14	92663073	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.181818
14	92663085	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.272727
14	96530527	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.166667
15	25429656	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.214286
15	25429769	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.25
15	25429802	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.25
15	25433825	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.135135
15	25433943	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.5
15	25433948	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.363636
15	25436731	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.25
15	25436732	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.5
15	25436735	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.583333
15	25437369	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.181818
15	25437385	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.24
15	25437479	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.137931
15	32522490	A->G	-	ENSG00000223509	AC135983.2	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.111111
15	32580892	A->G	+	ENSG00000261064	LINC02256	lincRNA	Intergenic	.	.	Alu	0.142857
15	41297832	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.230769
15	43748407	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.117647
15	43749703	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.102564
15	43749808	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.125
15	43749891	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.15
15	45600580	A->G	+	ENSG00000104164	BLOC1S6	protein_coding	Intergenic	.	.	Alu	0.121212
15	45600607	A->G	+	ENSG00000104164	BLOC1S6	protein_coding	Intergenic	.	.	Alu	0.0909091
15	49891870	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	49891871	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.214286
15	50000108	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0967742
15	50000171	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.230769
15	50000172	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.576923
15	50062192	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0869565
15	50062377	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0909091
15	50062448	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	1
15	50064882	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.075
15	50064991	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.177778
15	50065005	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0681818
15	50080632	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.333333
15	50080692	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.4375
15	50080705	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.222222
15	50080706	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.222222
15	50080728	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.166667
15	50099382	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0833333
15	50099428	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0740741
15	50099447	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0666667
15	50099448	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0666667
15	50099560	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.133333
15	50116197	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0714286
15	50338531	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.142857
15	50347877	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50347886	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.181818
15	50426111	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.181818
15	50427023	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.181818
15	50743438	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.363636
15	50743443	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.363636
15	51566127	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intergenic	.	.	Alu	0.2
15	52022360	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.0689655
15	52022471	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.0909091
15	52026535	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.181818
15	52026554	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.117647
15	52026566	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.166667
15	52048497	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.166667
15	52049679	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.181818
15	52062644	A->G	+	ENSG00000259712	AC023906.5	antisense	Intergenic	.	.	Alu	0.133333
15	52558237	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.166667
15	52558256	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.166667
15	52558902	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.153846
15	52558939	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.210526
15	52664816	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.2
15	55262291	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.230769
15	55277393	A->G	+	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.105263
15	55287513	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.222222
15	55287531	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.176471
15	55287582	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.4
15	55287593	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.2
15	55371001	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.111111
15	58176358	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.111111
15	58176791	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.153846
15	58176796	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.153846
15	58896324	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.125
15	58919377	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58923137	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.0952381
15	58923161	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.5
15	58927444	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.0909091
15	58929348	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.214286
15	58929365	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.166667
15	58929417	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	58929676	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.111111
15	58930613	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.1875
15	58992162	A->G	+	ENSG00000157450	RNF111	protein_coding	Intergenic	.	.	Alu	0.2
15	59665152	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.117647
15	59665169	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.214286
15	59665485	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.266667
15	59665553	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.357143
15	59671920	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.142857
15	59671967	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0666667
15	59671993	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.193548
15	59672014	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0588235
15	59672026	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0689655
15	59672029	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0689655
15	59672062	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0645161
15	59672345	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.185185
15	59672444	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.181818
15	59673897	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.230769
15	59673921	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.166667
15	59673923	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.25
15	59676416	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0952381
15	59686851	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0833333
15	59687015	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.111111
15	60372049	A->G	-	ENSG00000182718	ANXA2	protein_coding	Intergenic	.	.	Alu	0.153846
15	63124738	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.185185
15	63124743	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.37037
15	63124807	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.111111
15	63124820	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.235294
15	63125333	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.0769231
15	63126339	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63126356	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.222222
15	63128923	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.1
15	63129011	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.411765
15	63214607	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.142857
15	63228110	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.2
15	63529994	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63548216	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.111111
15	63548589	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.047619
15	63548793	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0769231
15	63550279	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0350877
15	63567207	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.121212
15	63567249	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.114286
15	63567275	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.111111
15	63568205	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.115385
15	63568221	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.275862
15	63568267	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0740741
15	63568275	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.115385
15	63568276	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.259259
15	63577426	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0666667
15	63582162	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	63582172	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.105263
15	63583332	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.129032
15	63583338	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0625
15	63831167	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.125
15	64849331	A->G	+	ENSG00000241839	PLEKHO2	protein_coding	Intergenic	.	.	Alu	0.363636
15	64868565	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64868994	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64869029	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.133333
15	64869061	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	64869062	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.105263
15	65722408	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65724227	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65724332	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65724333	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65734871	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0909091
15	65734899	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.210526
15	65734910	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65735161	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.105263
15	65735186	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65735198	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.176471
15	65735206	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.190476
15	65735212	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65735278	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.352941
15	65735321	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.214286
15	65736357	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.107143
15	65737136	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.047619
15	65737247	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0810811
15	65737252	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0769231
15	65737258	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65737286	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0434783
15	65737301	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.175
15	65737326	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.16129
15	65737331	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.148148
15	65737334	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0666667
15	65739930	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65740743	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1875
15	65746483	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65756974	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65762439	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65762517	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65766069	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65774139	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.105263
15	65777571	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.08
15	65777628	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0769231
15	65777779	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
15	65777951	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3125
15	65777952	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1875
15	65778029	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.222222
15	65778654	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0740741
15	65778782	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65779072	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0769231
15	65779079	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65779211	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65779263	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.148148
15	65779293	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.212121
15	65779373	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65779380	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65779582	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0833333
15	65779626	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65779742	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.47619
15	65779747	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.12
15	65779758	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0740741
15	65779939	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.103448
15	65779941	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0625
15	65788251	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65788347	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0740741
15	65788675	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.428571
15	65788690	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0606061
15	65788760	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.5
15	65789225	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0588235
15	65789284	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.04
15	65789298	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.26087
15	65789302	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0666667
15	65789324	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.214286
15	65789899	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65789911	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.129032
15	65789938	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.205882
15	65789939	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0882353
15	65789973	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65789988	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.208333
15	67071555	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.0606061
15	67074783	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.125
15	67117890	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.2
15	67117906	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.181818
15	67124057	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.3
15	68059144	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	68068553	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	68068592	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	68118178	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	70080315	A->G	-	ENSG00000140332	TLE3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	72212220	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.166667
15	72224678	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.157895
15	72224680	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.157895
15	72224697	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.1875
15	72224755	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.5
15	72224771	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.454545
15	72481508	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72481581	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.136364
15	72481640	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.266667
15	72482941	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.08
15	72498602	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.3
15	72519584	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72519609	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72563151	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72762009	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
15	72762944	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.181818
15	72776976	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.193548
15	72777006	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.608696
15	72778137	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.117647
15	72778140	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.235294
15	72778173	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.117647
15	72780613	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.1875
15	72780687	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.0645161
15	73613879	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.4
15	75999882	A->G	-	ENSG00000169752	NRG4	protein_coding	Intergenic	.	.	Alu	0.2
15	76004366	A->G	-	ENSG00000169752	NRG4	protein_coding	Intergenic	.	.	Alu	0.1875
15	78887878	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0666667
15	78887879	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.258065
15	78887883	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.206897
15	78887896	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	78887953	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.133333
15	78890097	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.103448
15	78890126	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.1875
15	78890141	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	78890556	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.117647
15	78890582	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0740741
15	78890585	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.178571
15	78890594	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0740741
15	78890599	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0740741
15	78899091	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
15	78899512	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
15	79964412	A->G	-	ENSG00000140379	BCL2A1	protein_coding	Intergenic	.	.	Alu	0.125
15	79964413	A->G	-	ENSG00000140379	BCL2A1	protein_coding	Intergenic	.	.	Alu	0.117647
15	79964423	A->G	-	ENSG00000140379	BCL2A1	protein_coding	Intergenic	.	.	Alu	0.133333
15	80083637	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80083704	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
15	80083705	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.266667
15	80083729	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.277778
15	80083733	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.157895
15	80083764	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.125
15	80083770	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.117647
15	80083771	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.411765
15	80083817	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.125
15	80088290	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80097069	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.272727
15	80097252	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.4
15	80097410	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.5
15	80097414	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.307692
15	80097415	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.230769
15	80097483	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.461538
15	80097488	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.538462
15	80097505	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80097570	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80101415	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80103918	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.3
15	80103978	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80103988	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
15	80104267	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80104380	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.363636
15	80111998	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	82823627	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.2
15	82824666	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.153846
15	82824700	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.153846
15	82824941	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.32
15	82824972	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.157895
15	82825002	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.277778
15	82825004	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.315789
15	85385965	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.2
15	85385971	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.181818
15	85586260	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.25
15	89093354	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	89097922	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.235294
15	89097965	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	89097984	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.1
15	89097991	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.136364
15	89098041	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.125
15	89098077	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.117647
15	89098080	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.25
15	89098100	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.214286
15	89099404	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.166667
15	89099418	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.266667
15	89099515	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.166667
15	90389884	A->G	+	ENSG00000140575	IQGAP1	protein_coding	Intergenic	.	.	Alu	0.105263
15	90444382	A->G	+	ENSG00000140575	IQGAP1	protein_coding	Intergenic	.	.	Alu	0.2
15	90444383	A->G	+	ENSG00000140575	IQGAP1	protein_coding	Intergenic	.	.	Alu	0.363636
15	91873874	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.692308
15	91875133	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.4
15	91875174	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.272727
15	91876275	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.25
15	91876285	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.222222
15	92891203	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0434783
15	92894035	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0769231
15	92894658	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0952381
15	92894674	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.08
15	92910068	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	92910631	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0526316
15	92911617	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	92911676	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	92916610	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.217391
15	92917304	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.2
15	92988176	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.117647
15	92992433	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.473684
16	11555535	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.181818
16	11570754	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.2
16	11570817	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.416667
16	11578034	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.3
16	11712735	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.181818
16	11714270	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.181818
16	11787190	A->G	-	ENSG00000122299	ZC3H7A	protein_coding	Intergenic	.	.	Alu	0.2
16	11848915	A->G	-	ENSG00000171490	RSL1D1	protein_coding	Intergenic	.	.	Alu	0.272727
16	15015148	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.272727
16	15080626	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.3
16	15080630	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.3
16	15080632	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.3
16	15672190	A->G	-	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.3
16	15689308	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.2
16	15697097	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.333333
16	15697100	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15697102	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15697144	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.272727
16	20740248	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.230769
16	20740284	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.166667
16	20892034	A->G	-	ENSG00000188215	DCUN1D3	protein_coding	Intergenic	.	.	Alu	0.3
16	21499204	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
16	21506885	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
16	21518826	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
16	21519790	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.285714
16	21956039	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.3
16	21956059	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.363636
16	21956266	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.3
16	21956469	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.153846
16	23470955	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.133333
16	23470990	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.2
16	23470994	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.5
16	23477014	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.230769
16	23477671	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.4
16	23507462	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.307692
16	23507528	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.363636
16	23507542	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.190476
16	23507545	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23508163	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23508169	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.125
16	23508285	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.230769
16	23508338	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23508347	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.105263
16	23839413	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.166667
16	23839416	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.166667
16	23859051	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.285714
16	23924271	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.307692
16	23927851	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.4
16	24974903	A->G	-	ENSG00000140750	ARHGAP17	protein_coding	Intergenic	.	.	Alu	0.153846
16	27314950	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.117647
16	27316171	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.0869565
16	27317016	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.142857
16	27317021	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.181818
16	27317118	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.1875
16	28168267	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.333333
16	28168268	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.166667
16	28168766	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28168823	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28168842	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.388889
16	28168894	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.466667
16	28827616	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.272727
16	28828772	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.153846
16	28828825	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.272727
16	28828993	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.25
16	28829011	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.25
16	28831445	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.25
16	28955143	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.545455
16	29557202	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	29591819	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	31121395	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0555556
16	31121851	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.12
16	31122616	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31358481	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.410256
16	31358508	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.125
16	31358522	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.111111
16	31358559	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0512821
16	31358879	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0487805
16	31358887	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.05
16	31358918	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.037037
16	31358930	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.04
16	31359000	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.144737
16	31359201	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.107143
16	31359238	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.025974
16	31359243	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0379747
16	31359249	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.12987
16	31359262	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0441176
16	31359346	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0625
16	31363516	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0869565
16	31363540	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.181818
16	31363547	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.214286
16	31363679	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.210526
16	31363707	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.130435
16	31364241	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.272727
16	31364347	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.142857
16	31364352	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31366696	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31366751	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.571429
16	31368351	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.153846
16	31368391	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.181818
16	31454315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
16	31891501	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.1
16	31891636	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.181818
16	31891637	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.130435
16	31891768	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.108108
16	31892098	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.0555556
16	31892115	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.0816327
16	31892117	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.106383
16	31892300	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.315789
16	31892308	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.09375
16	31892310	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.454545
16	31892381	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.27027
16	31892382	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.157895
16	46661084	A->G	-	ENSG00000261131	AC012186.2	sense_intronic	Intergenic	.	.	Alu	0.2
16	48601835	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.111111
16	50674388	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.2
16	50674403	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.181818
16	50674423	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.117647
16	50674475	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.117647
16	50674494	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.142857
16	50702172	A->G	+	ENSG00000167207	NOD2	protein_coding	Intergenic	.	.	Alu	0.125
16	50746221	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.133333
16	50749108	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.2
16	50758997	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.166667
16	56940406	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.333333
16	56940446	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.108108
16	56940472	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.181818
16	56940473	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0425532
16	56940479	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.386364
16	56940516	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.171429
16	56940541	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0857143
16	56940553	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.166667
16	56940568	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.111111
16	56940580	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.125
16	56940698	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.157895
16	56940733	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.166667
16	56940747	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.133333
16	56940801	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0697674
16	56940808	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.047619
16	56940810	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0697674
16	56940811	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0666667
16	56940812	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0434783
16	56940813	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.130435
16	56940816	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0425532
16	56940859	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.380952
16	58626896	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	67072819	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.181818
16	67072896	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.2
16	67072947	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.173913
16	67072948	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.25
16	67072949	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.0869565
16	67073452	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.166667
16	67073467	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.153846
16	67078498	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.5
16	67464032	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.230769
16	67471449	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.272727
16	67476779	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.210526
16	67476785	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.125
16	67476921	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.181818
16	67505090	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
16	67591242	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67591978	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.272727
16	69377079	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.166667
16	69586568	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69591810	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.230769
16	69591830	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69638010	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.153846
16	69638174	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.105263
16	69669147	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	71773834	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.545455
16	71773891	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.166667
16	71803023	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.2
16	71803707	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.111111
16	71807175	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.181818
16	74298661	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.107143
16	74298714	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.0869565
16	74298715	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.0833333
16	74298731	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.263158
16	74298777	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.1875
16	74299428	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.142857
16	74299483	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.115385
16	74299515	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.0588235
16	74299525	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.15625
16	74302604	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.0952381
16	74302622	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.181818
16	74302682	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.117647
16	83810642	A->G	+	ENSG00000230989	HSBP1	protein_coding	Intergenic	.	.	Alu	0.125
16	83810764	A->G	+	ENSG00000230989	HSBP1	protein_coding	Intergenic	.	.	Alu	0.0740741
16	85010225	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.125
16	85560192	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	85560216	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.117647
16	85560236	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.176471
16	85560265	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	85560317	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	85560342	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.214286
16	85560873	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.1875
16	85560943	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.105263
16	85561025	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.105263
16	85561047	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	85561057	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.235294
16	87400386	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.2
16	87401602	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.294118
16	87401730	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.133333
16	88849618	A->G	-	ENSG00000141012	GALNS	protein_coding	Intergenic	.	.	Alu	0.181818
16	88849619	A->G	-	ENSG00000141012	GALNS	protein_coding	Intergenic	.	.	Alu	0.2
16	88849703	A->G	-	ENSG00000141012	GALNS	protein_coding	Intergenic	.	.	Alu	0.214286
16	89450696	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.166667
16	89468487	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.214286
16	89888002	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.285714
16	89888010	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.230769
16	89888011	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.166667
16	89894790	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.125
16	89894802	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.153846
17	10109374	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.4
17	10109377	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.8
17	10174951	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.3
17	10175772	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.153846
17	10175786	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.2
17	10186496	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.416667
17	10186500	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.230769
17	10186501	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.153846
17	10188763	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.307692
17	10188777	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.214286
17	17829737	A->G	-	ENSG00000072310	SREBF1	protein_coding	Intergenic	.	.	Alu	0.142857
17	17829742	A->G	-	ENSG00000072310	SREBF1	protein_coding	Intergenic	.	.	Alu	0.2
17	17834318	A->G	-	ENSG00000072310	SREBF1	protein_coding	Intergenic	.	.	Alu	0.133333
17	17834365	A->G	-	ENSG00000072310	SREBF1	protein_coding	Intergenic	.	.	Alu	0.3
17	17834780	A->G	-	ENSG00000072310	SREBF1	protein_coding	Intergenic	.	.	Alu	0.166667
17	17834825	A->G	-	ENSG00000072310	SREBF1	protein_coding	Intergenic	.	.	Alu	0.25
17	18272225	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.428571
17	18272232	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.363636
17	18272248	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.6
17	18272353	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.222222
17	18297176	A->G	+	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.0555556
17	18297201	A->G	+	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.0392157
17	18297216	A->G	+	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.0333333
17	18297282	A->G	+	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.0363636
17	18319943	A->G	+	ENSG00000176994	SMCR8	protein_coding	Intergenic	.	.	Alu	0.142857
17	18651641	A->G	+	ENSG00000189375	TBC1D28	protein_coding	Intergenic	.	.	Alu	1
17	21207338	A->G	-	ENSG00000178307	TMEM11	protein_coding	Intergenic	.	.	Alu	0.166667
17	27297612	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.117647
17	27297614	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.166667
17	27297621	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.1
17	27297676	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.222222
17	27297690	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.15625
17	27297691	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.129032
17	27297695	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.0666667
17	27298483	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.133333
17	27299431	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.117647
17	27300783	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.0833333
17	27300790	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.12
17	27300791	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.08
17	28600173	A->G	+	ENSG00000227543	SPAG5-AS1	processed_transcript	Intergenic	.	.	Alu	0.0952381
17	28600221	A->G	+	ENSG00000227543	SPAG5-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
17	28672931	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.142857
17	28672936	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.133333
17	29289115	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.214286
17	29289124	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
17	29290452	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.4
17	29395716	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intergenic	.	.	Alu	0.166667
17	29395737	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intergenic	.	.	Alu	0.181818
17	29395758	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intergenic	.	.	Alu	0.142857
17	29644534	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.2
17	29750772	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29750773	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.3
17	29753161	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.142857
17	29753268	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29753269	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.272727
17	29753284	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29753287	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29756597	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	29757925	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	30390191	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.142857
17	30391320	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.125
17	30896659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	30961602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	30961664	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	30961673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	30962191	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	30962207	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	30964523	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	30964530	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	30964554	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	30965296	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intergenic	.	.	Alu	0.363636
17	30965298	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intergenic	.	.	Alu	0.25
17	30968510	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	30968514	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	30968524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	30973746	A->G	+	ENSG00000181481	RNF135	protein_coding	Intergenic	.	.	Alu	0.2
17	30973979	A->G	+	ENSG00000181481	RNF135	protein_coding	Intergenic	.	.	Alu	0.6
17	31313541	A->G	-	ENSG00000185862	EVI2B	protein_coding	Intergenic	.	.	Alu	0.0714286
17	31899503	A->G	-	ENSG00000108651	UTP6	protein_coding	Intergenic	.	.	Alu	0.2
17	32354077	A->G	+	ENSG00000265794	AC005899.4	processed_transcript	Intergenic	.	.	Alu	0.0909091
17	32354088	A->G	+	ENSG00000265794	AC005899.4	processed_transcript	Intergenic	.	.	Alu	0.0909091
17	32354133	A->G	+	ENSG00000265794	AC005899.4	processed_transcript	Intergenic	.	.	Alu	0.153846
17	32355214	A->G	+	ENSG00000265794	AC005899.4	processed_transcript	Intergenic	.	.	Alu	0.5
17	32359252	A->G	+	ENSG00000265794	AC005899.4	processed_transcript	Intergenic	.	.	Alu	0.181818
17	32450087	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.166667
17	32450141	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.2
17	32451998	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.125
17	35050476	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35050540	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.111111
17	35050558	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.142857
17	35050567	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.285714
17	35074443	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.222222
17	35076591	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.176471
17	35078378	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.533333
17	35078381	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.166667
17	35078463	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.153846
17	35078521	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.333333
17	35078814	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.25
17	35078836	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.529412
17	35078858	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.125
17	35083578	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.130435
17	35083668	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.125
17	35083669	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.117647
17	35084437	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.133333
17	35084472	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.125
17	35085532	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.0666667
17	35085558	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.12
17	35085567	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.307692
17	35085568	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.538462
17	35085586	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.241379
17	35085602	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.1
17	35085604	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.166667
17	35085649	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.363636
17	35085746	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.3
17	35086425	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.0833333
17	35408906	A->G	-	ENSG00000267745	AC060766.7	processed_transcript	Intergenic	.	.	Alu	0.133333
17	35599675	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.2
17	36192728	A->G	+	ENSG00000274767	AC243829.1	antisense	Intergenic	.	.	Alu	0.3
17	36547934	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36588508	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.2
17	38810675	A->G	-	ENSG00000273559	CWC25	protein_coding	Intergenic	.	.	Alu	0.166667
17	40315337	A->G	-	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.7
17	40335994	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.181818
17	41852130	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	41852131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
17	42385279	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	43251790	A->G	-	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.647059
17	43359678	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
17	43359870	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
17	43608101	A->G	-	ENSG00000267747	AC068675.1	antisense	Intergenic	.	.	Alu	0.0571429
17	43608141	A->G	-	ENSG00000267747	AC068675.1	antisense	Intergenic	.	.	Alu	0.0526316
17	43776037	A->G	-	ENSG00000108861	DUSP3	protein_coding	Intergenic	.	.	Alu	0.153846
17	45467148	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.3
17	45467220	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.2
17	45467516	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.4
17	45467595	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.142857
17	45467598	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.4375
17	45467612	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.230769
17	45467613	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.384615
17	45573674	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
17	45574324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
17	45574914	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
17	45579743	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
17	45581561	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
17	45582922	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
17	45583394	A->G	-	.	.	.	Intergenic	.	.	Alu	0.875
17	45583667	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
17	45583824	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
17	46156087	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.181818
17	46502359	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
17	46502367	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
17	47155825	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.2
17	48923995	A->G	+	ENSG00000159202	UBE2Z	protein_coding	Intergenic	.	.	Alu	0.2
17	51025744	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.214286
17	51032235	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51032291	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51032301	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.3
17	51032701	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.571429
17	51032851	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.25
17	51032852	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51037268	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51037272	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51037465	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.111111
17	51049555	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.166667
17	51049557	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.416667
17	51086570	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51086593	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	58288650	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	58288655	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
17	58288660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
17	58288777	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	58289111	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	59203198	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.230769
17	59203288	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.727273
17	59203289	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.7
17	59204771	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.0416667
17	59837008	A->G	-	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.117647
17	59842491	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
17	59842493	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
17	59842499	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
17	59842527	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
17	59842580	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
17	59842598	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
17	59842599	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
17	59842603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0574713
17	59842607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0813953
17	59842610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.244186
17	59842660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
17	59842898	A->G	+	.	.	.	Intergenic	.	.	Alu	0.36
17	59842906	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
17	59842914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
17	59842950	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
17	59843007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
17	59843033	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
17	59843093	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	59843111	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0882353
17	59843112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	59843124	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
17	59843814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	59843827	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
17	59843923	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
17	59843924	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
17	59843928	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
17	59843935	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	59843986	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
17	59844176	A->G	+	.	.	.	Intergenic	.	.	Alu	0.28
17	59844183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
17	59844195	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	59844213	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
17	59844234	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	62037783	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.4
17	62038802	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62038808	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62041674	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62041855	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	62041856	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.333333
17	62042939	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62060433	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	62060525	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62060940	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	62476443	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.3
17	62589826	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.6
17	62589828	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.133333
17	62589830	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.6875
17	62589838	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.125
17	62590508	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.4375
17	62590676	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.166667
17	62591236	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.1
17	64211902	A->G	-	ENSG00000136478	TEX2	protein_coding	Intergenic	.	.	Alu	0.166667
17	64350800	A->G	-	ENSG00000261371	PECAM1	protein_coding	Intergenic	.	.	Alu	0.142857
17	64350830	A->G	-	ENSG00000261371	PECAM1	protein_coding	Intergenic	.	.	Alu	0.166667
17	64362415	A->G	-	ENSG00000261371	PECAM1	protein_coding	Intergenic	.	.	Alu	1
17	64452354	A->G	+	ENSG00000271605	MILR1	protein_coding	Intergenic	.	.	Alu	0.2
17	64454030	A->G	+	ENSG00000271605	MILR1	protein_coding	Intergenic	.	.	Alu	0.1875
17	64454946	A->G	+	ENSG00000271605	MILR1	protein_coding	Intergenic	.	.	Alu	0.125
17	64468308	A->G	+	ENSG00000271605	MILR1	protein_coding	Intergenic	.	.	Alu	0.157895
17	64468733	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
17	64469582	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	64469588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
17	64469599	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	64469621	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
17	64469646	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
17	64469660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	64469661	A->G	+	.	.	.	Intergenic	.	.	Alu	0.192308
17	64470117	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
17	64470194	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	64470211	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	64470278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
17	64470294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
17	64470303	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
17	64470314	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
17	64470329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
17	64470330	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
17	64470356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
17	64470368	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
17	64470370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	64471688	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
17	64471694	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
17	64471696	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
17	64471697	A->G	+	.	.	.	Intergenic	.	.	Alu	0.344828
17	64471705	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
17	64471718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
17	64471719	A->G	+	.	.	.	Intergenic	.	.	Alu	0.419355
17	64471723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
17	64471750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
17	64472247	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	64472252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	64472268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	64472290	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	64472291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
17	64472302	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	64472314	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	64472316	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	64472320	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	64473230	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	64495459	A->G	+	ENSG00000256525	POLG2	protein_coding	Intergenic	.	.	Alu	0.3
17	64509300	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.333333
17	64509415	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.272727
17	64655864	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.545455
17	65025864	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.3
17	65038160	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.2
17	65038340	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.133333
17	67237083	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.2
17	67353586	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.272727
17	67354197	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.571429
17	67354243	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.166667
17	67354324	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.333333
17	67354327	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.3
17	67354785	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.166667
17	67358060	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.666667
17	67358105	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.222222
17	67358116	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67358142	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.235294
17	67358196	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.363636
17	67358376	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.6
17	67363300	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.25
17	68126006	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
17	68126083	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.037037
17	68445081	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.214286
17	68446383	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.105263
17	68447520	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.1
17	68447868	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	68447869	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.208333
17	68447910	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.142857
17	68447911	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	68449911	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	68449927	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.0666667
17	68455177	A->G	-	ENSG00000070540	WIPI1	protein_coding	Intergenic	.	.	Alu	0.0363636
17	74530932	A->G	-	ENSG00000178789	CD300LB	protein_coding	Intergenic	.	.	Alu	0.15
17	74530942	A->G	-	ENSG00000178789	CD300LB	protein_coding	Intergenic	.	.	Alu	0.142857
17	74531055	A->G	-	ENSG00000178789	CD300LB	protein_coding	Intergenic	.	.	Alu	0.08
17	74622346	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.173913
17	74777859	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.166667
17	74777894	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.1
17	74777895	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.190476
17	74777896	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.2
17	74778713	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.0869565
17	74778769	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.1875
17	74778794	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.272727
17	74782248	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.5
17	74782251	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.214286
17	74782253	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.153846
17	74782282	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.136364
17	74782302	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.172414
17	74782320	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.333333
17	74782336	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.466667
17	74782342	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.0588235
17	74782874	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.478261
17	74782875	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.0869565
17	74782900	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.230769
17	74782945	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.4
17	74788046	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.142857
17	74789760	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.181818
17	75104520	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0454545
17	75104551	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0857143
17	75104552	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0625
17	75104617	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0571429
17	75104633	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0952381
17	75104712	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0512821
17	75104724	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.047619
17	75106955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	75107055	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	75107062	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	75296318	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	75376836	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.4
17	75674893	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.153846
17	75683247	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.4
17	75690458	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.25
17	76719471	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.357143
17	76719531	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.230769
17	76722629	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.5
17	76723035	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.2
17	76723149	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.176471
17	76723225	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.133333
17	76723714	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0967742
17	76724199	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0952381
17	76724282	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.294118
17	76724286	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.117647
17	76724325	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.117647
17	76724330	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76724416	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76725296	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.105263
17	76728058	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.142857
17	76728156	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.1
17	76728322	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.416667
17	78379910	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78379931	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78379960	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78404340	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.222222
17	78404351	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0714286
17	78404410	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.305556
17	78404420	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0857143
17	78404480	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78404502	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0392157
17	78404860	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78422522	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.4
17	78422530	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.5625
17	78422597	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78422598	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.3
17	78699122	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78699972	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78702897	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.3125
17	78702950	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.45
17	78703012	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.583333
17	78703300	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.277778
17	78704645	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	78704721	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	78763852	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78769984	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.125
17	78770034	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78770037	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78770038	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78770202	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78770238	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.545455
17	78770557	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78770594	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.2
17	78770645	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.25
17	78773083	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.3
17	78773106	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.2
17	78773219	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.222222
17	78773222	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.111111
17	78907136	A->G	-	ENSG00000035862	TIMP2	protein_coding	Intergenic	.	.	Alu	0.272727
17	78907158	A->G	-	ENSG00000035862	TIMP2	protein_coding	Intergenic	.	.	Alu	0.3
17	81828059	A->G	-	ENSG00000225663	MCRIP1	protein_coding	Intergenic	.	.	Alu	0.2
17	81828066	A->G	-	ENSG00000225663	MCRIP1	protein_coding	Intergenic	.	.	Alu	0.583333
17	81837255	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81850586	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.3
17	81850624	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.4
17	81851939	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.142857
17	81857244	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.166667
17	81858025	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.375
17	81862276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
17	81881217	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	81881220	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	81881229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.692308
17	81881230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
17	81881341	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	81881349	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81881351	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
17	81881378	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
17	81881389	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
17	81881420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	81881425	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
17	81881441	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
17	81883467	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	81884039	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	81886709	A->G	-	.	.	.	Intergenic	.	.	Alu	0.217391
17	81886760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
17	83047545	A->G	-	ENSG00000175711	B3GNTL1	protein_coding	Intergenic	.	.	Alu	0.4
17	83047773	A->G	-	ENSG00000175711	B3GNTL1	protein_coding	Intergenic	.	.	Alu	0.411765
17	83048254	A->G	-	ENSG00000175711	B3GNTL1	protein_coding	Intergenic	.	.	Alu	0.125
18	12031228	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.214286
18	12310376	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.166667
18	12310609	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.285714
18	12310741	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.136364
18	12322136	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	13750585	A->G	+	ENSG00000101654	RNMT	protein_coding	Intergenic	.	.	Alu	0.230769
18	13750592	A->G	+	ENSG00000101654	RNMT	protein_coding	Intergenic	.	.	Alu	0.166667
18	21019184	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21032788	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.166667
18	21090363	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.2
18	21596159	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.2
18	26081392	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.166667
18	26081455	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.166667
18	26081878	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.2
18	26081886	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.181818
18	26081936	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.153846
18	26081963	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.181818
18	32113126	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.2
18	32120079	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.3
18	35068911	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.272727
18	45948054	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.545455
18	45953631	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.324324
18	49389568	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.166667
18	49389589	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.2
18	49389608	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.357143
18	49389635	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.181818
18	49389742	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.214286
18	54218867	A->G	-	ENSG00000134046	MBD2	protein_coding	Intergenic	.	.	Alu	0.3
18	56607605	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.153846
18	57618793	A->G	-	ENSG00000134440	NARS	protein_coding	Intergenic	.	.	Alu	0.2
18	63401496	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.181818
18	63401504	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.3
18	63419330	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.166667
18	76480695	A->G	-	ENSG00000101493	ZNF516	protein_coding	Intergenic	.	.	Alu	0.2
18	76807664	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.125
18	76807716	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.6
18	76807759	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.4
18	76808309	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.291667
18	76808322	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.0869565
18	76808348	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.25
18	76809145	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.125
18	76809469	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.133333
18	79685038	A->G	+	ENSG00000060069	CTDP1	protein_coding	Intergenic	.	.	Alu	0.583333
18	79948632	A->G	-	ENSG00000122490	PQLC1	protein_coding	Intergenic	.	.	Alu	0.166667
18	79985432	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.2
19	10272044	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0689655
19	10272234	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0769231
19	10272235	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0740741
19	10272797	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0869565
19	10273097	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.333333
19	10273231	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.214286
19	10275247	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.111111
19	10275613	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.272727
19	10276047	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.25
19	10278017	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.166667
19	10279512	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10280606	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10280639	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.133333
19	10930901	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.117647
19	11093118	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0952381
19	11094311	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.2
19	11095467	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.125
19	11095733	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.142857
19	11095735	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.117647
19	11096078	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.130435
19	11096105	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0869565
19	11096170	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0588235
19	11096212	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0833333
19	11097361	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.318182
19	11097605	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.125
19	11097611	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.117647
19	11097645	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.117647
19	11098411	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.166667
19	11101848	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.25
19	11101902	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.153846
19	11102376	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.363636
19	11104659	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0869565
19	11104692	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.125
19	11108793	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.142857
19	11113865	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.272727
19	11115069	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0571429
19	11115783	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.2
19	11117774	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.166667
19	11118638	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.222222
19	11118641	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0571429
19	11119169	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0909091
19	11119819	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.117647
19	11121028	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.0769231
19	11124141	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.1875
19	11124227	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.142857
19	11124292	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.272727
19	11124334	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.166667
19	11124335	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.5
19	11124445	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.133333
19	11124450	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.117647
19	11124458	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.15
19	11125248	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.166667
19	11125314	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.157895
19	11125333	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.190476
19	11125390	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.25
19	11127715	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.208333
19	11127725	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.1
19	11127752	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.192308
19	11129174	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.08
19	11567081	A->G	-	ENSG00000198551	ZNF627	protein_coding	Intergenic	.	.	Alu	0.181818
19	12002966	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
19	12288509	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.307692
19	12941983	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0540541
19	12942779	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.153846
19	12942834	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0571429
19	13837575	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
19	13838364	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0200501
19	13838382	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0204082
19	14374678	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
19	14374714	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	14374731	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	14383056	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.375
19	14383082	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.176471
19	14383319	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.166667
19	14390383	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.5
19	14398554	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.416667
19	14398921	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14398981	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.111111
19	14399901	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.115385
19	14399909	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14399914	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.103448
19	14399940	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14400227	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.384615
19	14400263	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.125
19	14400267	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0833333
19	14400282	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.178571
19	14400365	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.210526
19	14400389	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.358974
19	14400537	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14400542	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0952381
19	14400590	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14400591	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14400645	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.153846
19	14400665	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0952381
19	14400671	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.115385
19	14401003	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0540541
19	14401017	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0540541
19	14618308	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	14618309	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	15329493	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16077864	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16082418	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16082836	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1
19	16083908	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16083970	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1
19	16083996	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.368421
19	16084004	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.4
19	16084007	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16084066	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.5
19	16084103	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0909091
19	16084118	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.285714
19	16084134	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.419355
19	16091560	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16146494	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.153846
19	16329294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0990099
19	16330208	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
19	16330211	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
19	16330225	A->G	+	.	.	.	Intergenic	.	.	Alu	0.30303
19	16330247	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	16330330	A->G	+	.	.	.	Intergenic	.	.	Alu	0.04
19	16330347	A->G	+	.	.	.	Intergenic	.	.	Alu	0.169492
19	16331259	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
19	17080639	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.133333
19	17080666	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17081300	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17104673	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.4
19	17106720	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	18003189	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.125
19	18011055	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.3
19	18178236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
19	18178245	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
19	18178407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	18178503	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
19	18178525	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
19	18178580	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5625
19	18178606	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	18178753	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
19	18178775	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
19	18178776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16
19	18178805	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	18178815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	18178875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
19	18178889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	18178909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
19	18178935	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
19	18178947	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
19	18179158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
19	18179169	A->G	+	.	.	.	Intergenic	.	.	Alu	0.28
19	18179353	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
19	18179388	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18179406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	18179482	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
19	18179566	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
19	18183615	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18183624	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18275362	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
19	18276148	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
19	18276214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.108108
19	18276231	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
19	18276232	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
19	18276828	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
19	18278528	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0384615
19	18394843	A->G	-	ENSG00000175489	LRRC25	protein_coding	Intergenic	.	.	Alu	0.2
19	18453740	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.133333
19	18456038	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.166667
19	18970129	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
19	18970130	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
19	18970208	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
19	18970256	A->G	+	.	.	.	Intergenic	.	.	Alu	0.216216
19	18970337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.075
19	18970559	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
19	18970625	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
19	18970635	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
19	18970637	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	18970749	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	18971036	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	18971080	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	18971092	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
19	18971109	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
19	18971119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18972149	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
19	18973329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	18973372	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
19	19322343	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.5
19	19322344	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.25
19	19322417	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.692308
19	19322434	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.125
19	19322437	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.1875
19	19322478	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.6
19	19638635	A->G	-	ENSG00000089639	GMIP	protein_coding	Intergenic	.	.	Alu	0.2
19	21376609	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.6
19	21376610	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.7
19	29943871	A->G	+	ENSG00000105176	URI1	protein_coding	Intergenic	.	.	Alu	0.285714
19	29943879	A->G	+	ENSG00000105176	URI1	protein_coding	Intergenic	.	.	Alu	0.1875
19	35892176	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.3
19	35892198	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.166667
19	35906878	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.125
19	35906989	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.2
19	35906996	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.454545
19	35906997	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.454545
19	35906998	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.272727
19	39404500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
19	39406122	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
19	40581982	A->G	+	ENSG00000160410	SHKBP1	protein_coding	Intergenic	.	.	Alu	0.4
19	43648308	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.117647
19	43648314	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.157895
19	43652811	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.133333
19	43653735	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.2
19	43654684	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.181818
19	43658006	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0869565
19	43659278	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.153846
19	43662013	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.1
19	43662333	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.166667
19	43662390	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.166667
19	43662398	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.25
19	43662847	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.125
19	43662879	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.111111
19	43663537	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.142857
19	43663547	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.142857
19	43664536	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0645161
19	43667158	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.08
19	45004972	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45004982	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.285714
19	45005866	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45006285	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45006309	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45006465	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45006466	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45010038	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.25
19	45010182	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45012583	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.176471
19	45012671	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45012829	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45013221	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.363636
19	45013222	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.454545
19	45013618	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45014406	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45014410	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45014418	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45014433	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.315789
19	45452122	A->G	+	ENSG00000012061	ERCC1	protein_coding	Intergenic	.	.	Alu	0.2
19	47310717	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.2
19	47310718	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.2
19	47311363	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.3
19	47388017	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	47388063	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	47388426	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
19	47388766	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
19	47388783	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
19	48328068	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.115385
19	49489305	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.25
19	51131376	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.133333
19	51133570	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.181818
19	51216446	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
19	51216448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.909091
19	51217367	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
19	51217490	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	51217654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
19	51217679	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
19	51217680	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
19	51217681	A->G	+	.	.	.	Intergenic	.	.	Alu	0.409091
19	51217693	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
19	51217699	A->G	+	.	.	.	Intergenic	.	.	Alu	0.52381
19	52197417	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.210526
19	52197419	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.263158
19	52557341	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.6
19	52702043	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	52702055	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	52702189	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	52702219	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	52702241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
19	53823829	A->G	-	ENSG00000142405	NLRP12	protein_coding	Intergenic	.	.	Alu	0.272727
19	53871111	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.0714286
19	53871962	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.0571429
19	53872472	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.0645161
19	53872539	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.16
19	53872619	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.113636
19	54097503	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.125
19	54097667	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.190476
19	54097758	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.153846
19	54097827	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.4
19	54098348	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54098399	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.181818
19	54098440	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.25
19	54098443	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.230769
19	54098489	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54098550	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.136364
19	54098648	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.272727
19	54098684	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.0769231
19	54098725	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.0909091
19	54098726	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.0909091
19	54098729	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.0909091
19	54098751	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.130435
19	54098820	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54099341	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.333333
19	54099342	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.142857
19	54202932	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0487805
19	54214061	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.4
19	54214150	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.307692
19	54215206	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0307692
19	54215470	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0273973
19	54216127	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.057971
19	54237200	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.181818
19	54237251	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.166667
19	54237254	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.181818
19	54237263	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.125
19	54237277	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.526316
19	54237280	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.176471
19	54237281	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.352941
19	54237319	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.153846
19	54237325	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.21875
19	54237336	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.125
19	54237346	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.115385
19	54238186	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0833333
19	54238262	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0689655
19	54239751	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.307692
19	54372939	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	54372948	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	54373046	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	54451802	A->G	+	ENSG00000167615	LENG8	protein_coding	Intergenic	.	.	Alu	1
19	54884511	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.166667
19	54884512	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.166667
19	54884534	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.181818
19	54885925	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.111111
19	54885926	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.15
19	54886168	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54886169	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.3
19	54886580	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.272727
19	54887382	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.166667
19	54887692	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.142857
19	54887838	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.1875
19	54891504	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
19	54891526	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
19	54891532	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
19	54891589	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
19	54891629	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	54892079	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	54892083	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	57855225	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	57866080	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.333333
19	57866125	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.125
19	57866149	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.3
19	57866160	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.461538
19	57866180	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.133333
19	57866234	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.181818
19	57866760	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.25
19	57906506	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.111111
19	57906544	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.555556
19	57906558	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.230769
19	58187522	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.166667
19	58188537	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.4
19	58194443	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.3
19	58195775	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.3
20	17962475	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.214286
20	17962476	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.285714
20	17962478	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.571429
20	17965513	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.181818
20	25314111	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.4
20	25314176	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.2
20	32081084	A->G	+	ENSG00000101336	HCK	protein_coding	Intergenic	.	.	Alu	0.1
20	32198585	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.142857
20	32199666	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.166667
20	32199724	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.190476
20	32199824	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.133333
20	32200375	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.5
20	32200413	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.166667
20	32201468	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.333333
20	32201471	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.0952381
20	32201501	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.1
20	32201522	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.2
20	32201546	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.142857
20	32201551	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.333333
20	32851334	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.115385
20	32853171	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.266667
20	32854010	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.1
20	32854012	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.15
20	32854017	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.263158
20	32854573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
20	32854582	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
20	33685671	A->G	-	ENSG00000101412	E2F1	protein_coding	Intergenic	.	.	Alu	0.214286
20	33821660	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.125
20	33821662	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.352941
20	33821702	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.3
20	33821703	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.181818
20	33849341	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.16
20	33849403	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.0714286
20	33849480	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.0952381
20	33849827	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.470588
20	33849986	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.153846
20	35719264	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.166667
20	35719457	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35719485	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.214286
20	35720647	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.375
20	35723984	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.166667
20	35724325	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35726888	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0769231
20	35726989	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.135135
20	35727586	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.25
20	35727587	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.1
20	35727981	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0869565
20	35728827	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.111111
20	35728981	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.166667
20	35736713	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35736736	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.1875
20	35736747	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35736762	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.285714
20	35736791	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.285714
20	35736830	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.2
20	35736880	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.3
20	35737014	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.111111
20	35737015	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.166667
20	35737040	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.125
20	35737074	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.105263
20	35737085	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.25
20	35737108	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.105263
20	35737555	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.125
20	35737606	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0526316
20	35737620	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0967742
20	35737676	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0465116
20	35737691	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0555556
20	35737727	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0851064
20	35737734	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0625
20	35737737	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0851064
20	35737966	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.130435
20	36909412	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	36913843	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36914786	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.363636
20	36914789	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.363636
20	36915008	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	36915621	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36927849	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.0740741
20	36927929	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	36927938	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.3
20	36927951	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.3
20	36928175	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.111111
20	36928225	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36934263	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.263158
20	36934269	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.0526316
20	36934278	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.148148
20	36934304	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.0869565
20	36934344	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.214286
20	36934358	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.307692
20	36934376	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.214286
20	36934402	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.1875
20	36934447	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36934466	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	36934476	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	36936032	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36936056	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.3125
20	36936144	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.409091
20	36936156	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.136364
20	36936183	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.1
20	36936191	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.15
20	36936193	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	36936238	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	36936394	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.125
20	36936399	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.285714
20	36936410	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	36936413	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.214286
20	36936453	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.3
20	36936709	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.08
20	36936722	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	36936750	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.222222
20	36936757	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.176471
20	36936769	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	36936821	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.125
20	36936835	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.222222
20	36936838	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36936839	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.222222
20	36936849	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.125
20	36936978	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.230769
20	36936997	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36937058	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.363636
20	36937059	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.5
20	36938147	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	36938647	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.25
20	36938714	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.3
20	36938763	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	36938783	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.411765
20	36938789	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.125
20	36940124	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	36940144	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.208333
20	37216100	A->G	+	ENSG00000118705	RPN2	protein_coding	Intergenic	.	.	Alu	0.166667
20	37216106	A->G	+	ENSG00000118705	RPN2	protein_coding	Intergenic	.	.	Alu	0.166667
20	37216153	A->G	+	ENSG00000118705	RPN2	protein_coding	Intergenic	.	.	Alu	0.166667
20	41038722	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.173913
20	41038728	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.190476
20	41056504	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.230769
20	44510646	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.181818
20	44510650	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.363636
20	44510688	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.230769
20	44510700	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.25
20	44516154	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.2
20	45895660	A->G	+	ENSG00000064601	CTSA	protein_coding	Intergenic	.	.	Alu	0.25
20	45895674	A->G	+	ENSG00000064601	CTSA	protein_coding	Intergenic	.	.	Alu	0.333333
20	45895819	A->G	+	ENSG00000064601	CTSA	protein_coding	Intergenic	.	.	Alu	0.181818
20	45895820	A->G	+	ENSG00000064601	CTSA	protein_coding	Intergenic	.	.	Alu	0.363636
20	48810326	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.105263
20	48810365	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.375
20	48811252	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.25
20	48811287	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.105263
20	48811288	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.15
20	48811304	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.466667
20	48925758	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.545455
20	48925762	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.25
20	48926558	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.142857
20	48944573	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	48945760	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	48955913	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.2
20	49275646	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.2
20	49690096	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.214286
20	49690101	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.230769
20	49695680	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.2
20	49707690	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.4
20	49707813	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.583333
20	49708162	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.3
20	49709717	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.363636
20	49710557	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.3
20	50912230	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.230769
20	50912232	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.384615
20	50919411	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.176471
20	50919419	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.333333
20	50920194	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.2
20	50927691	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.166667
20	50928049	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.416667
20	50942607	A->G	-	ENSG00000259456	ADNP-AS1	antisense	Intergenic	.	.	Alu	0.166667
20	53571582	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.153846
20	53573686	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.2
20	53573731	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.214286
20	53573732	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.133333
20	53573738	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.142857
20	53573814	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.111111
20	53573914	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.181818
20	56477666	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.25
20	58307803	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
20	58307956	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.128205
20	58308023	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
20	58308040	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
20	58308048	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
20	58308103	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
20	62162035	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	62162042	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.26087
20	62162043	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	62162061	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	62162067	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.0689655
20	62162068	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.115385
20	62162074	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	62162143	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.130435
20	62162169	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	62162405	A->G	+	ENSG00000184402	SS18L1	protein_coding	Intergenic	.	.	Alu	0.111111
20	63625776	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.181818
20	63625777	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.166667
20	63871489	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.142857
20	63874492	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.0869565
20	63874539	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.310345
20	63874540	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.0714286
20	63874612	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.107143
20	63897153	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.133333
20	63899842	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.2
20	63900395	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.117647
20	63900415	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.133333
20	63900486	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.307692
20	63900492	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.153846
20	63900497	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.333333
20	63901039	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.153846
20	63901065	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.2
20	63901185	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.2
20	63901245	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.153846
20	63903066	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.166667
20	63903900	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.2
20	63903905	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.3
20	63903909	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.2
20	63906920	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.153846
21	14544175	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0555556
21	14544189	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.222222
21	14544230	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0434783
21	14544283	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.05
21	15758886	A->G	+	ENSG00000155313	USP25	protein_coding	Intergenic	.	.	Alu	0.266667
21	17815771	A->G	-	ENSG00000154642	C21orf91	protein_coding	Intergenic	.	.	Alu	0.133333
21	29026203	A->G	+	ENSG00000156256	USP16	protein_coding	Intergenic	.	.	Alu	0.166667
21	29026204	A->G	+	ENSG00000156256	USP16	protein_coding	Intergenic	.	.	Alu	0.181818
21	29028696	A->G	+	ENSG00000156256	USP16	protein_coding	Intergenic	.	.	Alu	0.272727
21	29028697	A->G	+	ENSG00000156256	USP16	protein_coding	Intergenic	.	.	Alu	0.2
21	29338405	A->G	+	ENSG00000156273	BACH1	protein_coding	Intergenic	.	.	Alu	0.142857
21	33231876	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.153846
21	33231945	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.0434783
21	33360197	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
21	33360298	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
21	33360309	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
21	33380181	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
21	33380226	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
21	33382187	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
21	33404872	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0545455
21	33405776	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0625
21	33405949	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.104167
21	33405950	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0434783
21	33405974	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0344828
21	33406255	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.105263
21	33406297	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.272727
21	33406760	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.130435
21	33406822	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.1
21	33406883	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0833333
21	33406884	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0571429
21	33408297	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.153846
21	33409214	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.133333
21	33410642	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0909091
21	33415936	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.176471
21	33416142	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33423578	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33423743	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.142857
21	33424130	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33430032	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.142857
21	33430060	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.15
21	33430126	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.176471
21	33430474	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33430572	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.176471
21	33430700	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.4
21	33430705	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.357143
21	33430727	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33432979	A->G	+	ENSG00000142188	TMEM50B	protein_coding	Intergenic	.	.	Alu	0.181818
21	34872103	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.133333
21	37374606	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.111111
21	37375589	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.238095
21	37375590	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0952381
21	37375630	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.16
21	37375643	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.846154
21	37375690	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.416667
21	37375691	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.384615
21	37376255	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.333333
21	37376271	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.133333
21	37376290	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.117647
21	37376324	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0909091
21	37376344	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.285714
21	37376388	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.105263
21	38812702	A->G	+	ENSG00000157557	ETS2	protein_coding	Intergenic	.	.	Alu	0.153846
21	41997529	A->G	-	ENSG00000173276	ZBTB21	protein_coding	Intergenic	.	.	Alu	0.2
22	12626647	A->G	+	.	.	.	Intergenic	.	.	Alu	1
22	16604409	A->G	+	ENSG00000283633	AP000547.3	lincRNA	Intergenic	.	.	Alu	0.916667
22	17211533	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.230769
22	17212286	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.4
22	17212473	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.235294
22	17625339	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.166667
22	17662972	A->G	+	ENSG00000099968	BCL2L13	protein_coding	Intergenic	.	.	Alu	0.2
22	17763495	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.181818
22	17766650	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.105263
22	17766652	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.263158
22	17766791	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.2
22	20573108	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20573177	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20573230	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20573238	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.181818
22	20573242	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.454545
22	21853868	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.142857
22	24173714	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.214286
22	24173737	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.25
22	24174241	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.545455
22	24174271	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.153846
22	24174303	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.2
22	24435587	A->G	+	ENSG00000128271	ADORA2A	protein_coding	Intergenic	.	.	Alu	0.0588235
22	24515926	A->G	+	ENSG00000100024	UPB1	protein_coding	Intergenic	.	.	Alu	0.142857
22	24573113	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0392157
22	24574564	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0428571
22	24574810	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0224719
22	29180557	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
22	29280207	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.181818
22	29281329	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.214286
22	29286202	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.153846
22	29287897	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.181818
22	29499420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
22	29903175	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.454545
22	29975886	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.142857
22	29977109	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.25
22	29977110	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.166667
22	29977145	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.166667
22	31245516	A->G	+	ENSG00000182541	LIMK2	protein_coding	Intergenic	.	.	Alu	0.2
22	35301127	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.0425532
22	35302478	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.153846
22	35302584	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.0869565
22	35321111	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.4
22	35331235	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.166667
22	35331237	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.166667
22	35331809	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.181818
22	37284644	A->G	+	ENSG00000100055	CYTH4	protein_coding	Intergenic	.	.	Alu	0.416667
22	37562978	A->G	+	ENSG00000128283	CDC42EP1	protein_coding	Intergenic	.	.	Alu	0.2
22	37579353	A->G	-	ENSG00000100079	LGALS2	protein_coding	Intergenic	.	.	Alu	0.181818
22	37614859	A->G	+	ENSG00000100083	GGA1	protein_coding	Intergenic	.	.	Alu	0.153846
22	37614868	A->G	+	ENSG00000100083	GGA1	protein_coding	Intergenic	.	.	Alu	0.153846
22	38502193	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0789474
22	38502208	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.125
22	38502226	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.12
22	38502239	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0769231
22	38502362	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.103448
22	38953536	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.138889
22	38954093	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.347826
22	38954097	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.48
22	38954101	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.173913
22	38954120	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.12
22	38954126	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.272727
22	38954249	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.157895
22	38954257	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.923077
22	38954316	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.608696
22	38954328	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.285714
22	38954533	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.25
22	38954602	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.318182
22	38954609	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.526316
22	38954640	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.4375
22	38954641	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.3125
22	39054531	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
22	40950145	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
22	40953118	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.2
22	41136540	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.181818
22	41141877	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.181818
22	41143737	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.181818
22	41143738	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.181818
22	41790694	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.4
22	41791316	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.2
22	41797497	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.2
22	41797532	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.133333
22	41797562	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.2
22	41835899	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.0833333
22	41843739	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.2
22	41843740	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.2
22	41845203	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.181818
22	42590327	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.2
22	44029526	A->G	+	ENSG00000188677	PARVB	protein_coding	Intergenic	.	.	Alu	0.181818
22	49819221	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.125
22	49822674	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.1875
22	49822677	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.235294
22	50540045	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0344828
22	50540472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.391304
22	50624132	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.625
22	50624168	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.25
22	50624169	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	100040664	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.153846
1	100042720	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.1
1	100042747	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.235294
1	100042793	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.117647
1	100075898	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.133333
1	108754091	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	108754134	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.0909091
1	108754150	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.105263
1	108754222	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.1875
1	108754256	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.176471
1	108755244	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.294118
1	108755245	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.117647
1	108755410	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.08
1	108761852	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.25
1	108761885	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.117647
1	108761930	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.133333
1	109063475	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0434783
1	109063539	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.137931
1	109063551	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.097561
1	109063553	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0487805
1	109063669	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0689655
1	109063992	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.2
1	109064033	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.133333
1	109064035	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.5
1	109064046	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.117647
1	109064089	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.214286
1	109064101	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.166667
1	109919367	A->G	+	ENSG00000184371	CSF1	protein_coding	Intergenic	.	.	Alu	0.2
1	110876465	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.625
1	111635666	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.111111
1	111654980	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	112655356	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.363636
1	112655366	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.117647
1	112655392	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.444444
1	112655397	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.384615
1	112655398	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	112655588	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	112655666	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.466667
1	112655667	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	112655692	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.4
1	112655702	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.538462
1	112665316	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112665389	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112665448	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.266667
1	112668669	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	114512292	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	114711093	A->G	-	ENSG00000213281	NRAS	protein_coding	Intergenic	.	.	Alu	0.166667
1	114711131	A->G	-	ENSG00000213281	NRAS	protein_coding	Intergenic	.	.	Alu	0.166667
1	114713431	A->G	-	ENSG00000213281	NRAS	protein_coding	Intergenic	.	.	Alu	0.142857
1	114713443	A->G	-	ENSG00000213281	NRAS	protein_coding	Intergenic	.	.	Alu	0.125
1	114743294	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.107143
1	114743385	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.142857
1	114752149	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	114752154	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	114753804	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.1875
1	114753816	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.166667
1	114754135	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	114754265	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.166667
1	114754266	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.111111
1	114754274	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.235294
1	115087005	A->G	-	ENSG00000134198	TSPAN2	protein_coding	Intergenic	.	.	Alu	0.25
1	115986106	A->G	+	ENSG00000163393	SLC22A15	protein_coding	Intergenic	.	.	Alu	0.111111
1	116521001	A->G	-	ENSG00000116815	CD58	protein_coding	Intergenic	.	.	Alu	0.136364
1	145987981	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
1	145990940	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	145991398	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	145992078	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0540541
1	148426177	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.384615
1	148426185	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
1	148427225	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
1	148427267	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
1	148427322	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
1	148427330	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
1	149407150	A->G	+	ENSG00000271383	NBPF19	protein_coding	Intergenic	.	.	Alu	0.769231
1	149887390	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
1	149887412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.140187
1	149887465	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0657895
1	149887468	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
1	149887489	A->G	-	.	.	.	Intergenic	.	.	Alu	0.101266
1	149887490	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0519481
1	150180482	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	150331172	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.181818
1	150339102	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.2
1	150339104	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.6
1	150339933	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.181818
1	150339984	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.153846
1	150341764	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.333333
1	150341833	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.142857
1	150341869	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.166667
1	150350759	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.3
1	150571326	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0813953
1	150571363	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.025641
1	150571412	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.107143
1	150572347	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0714286
1	150611261	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0384615
1	150611925	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0425532
1	150611926	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.020202
1	150611929	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.03125
1	150611990	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0217391
1	150612014	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0537634
1	150612583	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0394737
1	150612600	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.307692
1	150612601	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.026087
1	150612624	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.037037
1	150613092	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.04
1	150613096	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.176471
1	150613102	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0697674
1	150613103	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0465116
1	150613108	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0454545
1	150613129	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0571429
1	150613213	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150618546	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.142857
1	150620827	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.153846
1	150620956	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.176471
1	150993478	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.142857
1	150996444	A->G	-	ENSG00000143409	MINDY1	protein_coding	Intergenic	.	.	Alu	0.272727
1	153639957	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.25
1	153640242	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.153846
1	153640289	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.181818
1	153640570	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0909091
1	153640578	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.15
1	153640593	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0909091
1	154164419	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.363636
1	154164433	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.181818
1	154180663	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.117647
1	154411788	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.416667
1	154411793	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.230769
1	154412347	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.166667
1	154412358	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.153846
1	154433815	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.5
1	154433816	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.5
1	155556210	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.153846
1	155556289	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.2
1	155680652	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155681583	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155683612	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	155683622	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	155683894	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.2
1	155905472	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.2
1	155930832	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.153846
1	155932933	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.272727
1	155956574	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.142857
1	156116704	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0571429
1	156116778	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0925926
1	156116832	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0434783
1	156118058	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0416667
1	156119464	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.135135
1	156119482	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0652174
1	156120495	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.075
1	156120519	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.105263
1	156120547	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0444444
1	156120593	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0952381
1	156120610	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.106383
1	156121162	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.114286
1	156121246	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0789474
1	156125569	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0952381
1	156125869	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.08
1	156132019	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.152174
1	156132026	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0425532
1	156132048	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0416667
1	156132097	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0625
1	156132116	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0588235
1	156132350	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.181818
1	156133318	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.2
1	156133406	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.181818
1	156133409	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.153846
1	156133410	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.153846
1	156133411	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.25
1	156133450	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.2
1	156134040	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.111111
1	156134075	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.153846
1	156134116	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.105263
1	156134117	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.25
1	156143186	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	156469834	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.454545
1	162574354	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	167636829	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intergenic	.	.	Alu	0.125
1	171487128	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171487140	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.4
1	171487653	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.148148
1	171487738	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.15625
1	171496849	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.181818
1	171500468	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171500526	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.176471
1	171500536	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
1	171502895	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.285714
1	171502943	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.2
1	171503282	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.25
1	171527649	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.8
1	171546743	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.529412
1	171546801	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
1	171546804	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.307692
1	171546853	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.157895
1	171546861	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
1	171547026	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.111111
1	173859879	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	174007498	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.25
1	174009627	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.0740741
1	174009628	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.08
1	176020119	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	176020145	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	176020148	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	182863970	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.176471
1	182864281	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.333333
1	183559667	A->G	-	ENSG00000116701	NCF2	protein_coding	Intergenic	.	.	Alu	0.181818
1	183562034	A->G	-	ENSG00000116701	NCF2	protein_coding	Intergenic	.	.	Alu	0.125
1	183585363	A->G	-	ENSG00000116701	NCF2	protein_coding	Intergenic	.	.	Alu	0.08
1	197766178	A->G	-	ENSG00000213047	DENND1B	protein_coding	Intergenic	.	.	Alu	0.117647
1	198668275	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.0645161
1	198680373	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.153846
1	198680374	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.153846
1	201515320	A->G	+	ENSG00000224536	AC096677.1	antisense	Intergenic	.	.	Alu	0.363636
1	201961590	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.181818
1	201961596	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.181818
1	202137532	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.272727
1	203809729	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.2
1	203811588	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203830646	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.6
1	203837093	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.3
1	204396937	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.136364
1	204402497	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.142857
1	204402500	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.166667
1	204402621	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.416667
1	204402989	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.1875
1	204402990	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.176471
1	204523661	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.166667
1	204534513	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.461538
1	204534536	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.277778
1	204534600	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.238095
1	204534605	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.176471
1	204534653	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.166667
1	204535287	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.166667
1	204536184	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.363636
1	205208639	A->G	-	ENSG00000133059	DSTYK	protein_coding	Intergenic	.	.	Alu	0.25
1	206304031	A->G	+	ENSG00000266028	SRGAP2	protein_coding	Intergenic	.	.	Alu	1
1	206516596	A->G	+	ENSG00000266094	RASSF5	protein_coding	Intergenic	.	.	Alu	0.166667
1	217603841	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.2
1	217604269	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.4
1	217604304	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.3
1	222714790	A->G	+	ENSG00000162819	BROX	protein_coding	Intergenic	.	.	Alu	0.142857
1	222714794	A->G	+	ENSG00000162819	BROX	protein_coding	Intergenic	.	.	Alu	0.176471
1	223719460	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.111111
1	223722525	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.166667
1	223786718	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	223786745	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.176471
1	223787033	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	223787034	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	223787765	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.125
1	223787778	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.176471
1	223790291	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.12
1	223790442	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.428571
1	223790449	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.16
1	223790471	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.103448
1	223790742	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.444444
1	223790781	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	223790785	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.117647
1	223799224	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.125
1	223809337	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0392157
1	223809349	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0851064
1	223809362	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0526316
1	223809401	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.35
1	223809404	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	223822409	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.2
1	224184629	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.25
1	224184871	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.153846
1	224390212	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.125
1	224397209	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.133333
1	224397270	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0952381
1	224399889	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.133333
1	224399936	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.5
1	224399941	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.4375
1	224411925	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.121951
1	224411997	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0689655
1	224417516	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0952381
1	224417555	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.235294
1	224417556	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.294118
1	224417590	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.1875
1	225787033	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.181818
1	225787053	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.117647
1	225788211	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.181818
1	225788349	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.583333
1	225788358	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.181818
1	225997527	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.2
1	225997578	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.142857
1	225997594	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.166667
1	226000674	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
1	226067529	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.0869565
1	226067565	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.2
1	226067622	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.166667
1	226067634	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.166667
1	226729218	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.2
1	226729227	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.2
1	228139675	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
1	231533122	A->G	+	ENSG00000116918	TSNAX	protein_coding	Intergenic	.	.	Alu	0.2
1	234953093	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
1	234953094	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
1	234953292	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	234956483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
1	234956488	A->G	-	.	.	.	Intergenic	.	.	Alu	0.785714
1	235231922	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.125
1	235232618	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235233268	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235238659	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235257674	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235299036	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235313206	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235826709	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0447761
1	235826764	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.047619
1	235826850	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.122449
1	235826857	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0434783
1	235826901	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0338983
1	235827119	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0363636
1	235827181	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0571429
1	235827331	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.176471
1	235827343	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.102041
1	235827355	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0465116
1	235827361	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0638298
1	235829104	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0487805
1	235839319	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.166667
1	235839429	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.133333
1	235839577	A->G	-	ENSG00000229463	LYST-AS1	antisense	Intergenic	.	.	Alu	0.181818
1	235861746	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0277778
1	235861748	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.27027
1	235861767	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.1
1	235861787	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.42
1	235862578	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.307692
1	235862579	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0769231
1	243240872	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.454545
1	243240875	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.166667
1	243243141	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.166667
1	243244663	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.2
1	243244664	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.181818
1	243247443	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.153846
1	243249169	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.08
1	243249293	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.4
1	246002460	A->G	+	ENSG00000185420	SMYD3	protein_coding	Intergenic	.	.	Alu	0.923077
1	246594569	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.142857
1	246922175	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.181818
1	246922297	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.307692
1	246929872	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	246930277	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	246930680	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	246930685	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.1
1	246930702	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.266667
1	247419272	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.125
1	247427581	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.412281
1	247428530	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.0714286
1	247428986	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.08
1	247430792	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.666667
1	247430796	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.611111
1	247430836	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.25
1	247430860	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.142857
1	247430871	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.1
1	247430879	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.157895
1	247431090	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.4
1	247431952	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.2
1	247432014	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.12
2	101274902	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0487805
2	101275021	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0731707
2	101275242	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.129032
2	101284573	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.2
2	101304230	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.2
2	101307452	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.181818
2	106185156	A->G	-	ENSG00000115652	UXS1	protein_coding	Intergenic	.	.	Alu	1
2	108596703	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.142857
2	108596716	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.235294
2	108596757	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.117647
2	108597124	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
2	108597143	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.105263
2	108597161	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.166667
2	108738728	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	108738729	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	108738732	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	108738733	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	108738794	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	108739748	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108739798	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.153846
2	108742511	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0571429
2	108742547	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0540541
2	108742850	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.230769
2	108742906	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.214286
2	108742918	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.35
2	108742928	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.105263
2	108742996	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.5
2	108744228	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108744257	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.111111
2	112654044	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.08
2	112655049	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	112655073	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	112655134	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	112655135	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.642857
2	112655149	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.136364
2	112655221	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.217391
2	112656265	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	112661817	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	113585454	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
2	113709846	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.105263
2	113709923	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.230769
2	113749257	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.266667
2	113749258	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.133333
2	113749259	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.214286
2	113749284	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.125
2	113749328	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.315789
2	113749417	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.166667
2	113751036	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.166667
2	113933253	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.315789
2	113933282	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.5
2	117993802	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.4
2	118006306	A->G	-	ENSG00000235066	AC009303.2	antisense	Intergenic	.	.	Alu	0.5
2	127322666	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127328223	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127328239	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127333021	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	127333030	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	127333034	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	127333950	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127334037	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.15
2	127334038	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.1
2	127334066	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.384615
2	127334067	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127334086	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127336969	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.133333
2	127344656	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127344961	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127345091	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.230769
2	127375506	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.363636
2	127375580	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.105263
2	127375672	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	127376908	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127376949	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.105263
2	127377042	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.285714
2	127793705	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.2
2	127802796	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.181818
2	127802886	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.222222
2	131080904	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131084820	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131084821	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131089104	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131089159	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131090648	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.153846
2	131091885	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.08
2	131109887	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.2
2	131110399	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.2
2	131110488	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.272727
2	131113287	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.307692
2	131113293	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.153846
2	131145411	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.230769
2	131145420	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.230769
2	134929343	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.2
2	134929931	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.25
2	134950025	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.117647
2	134950053	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.133333
2	135760030	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.181818
2	135760271	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	135760272	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	135760275	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.25
2	142884824	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.3
2	142888251	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.125
2	142890517	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.166667
2	143178693	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.142857
2	143178694	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.142857
2	143180855	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.181818
2	143301095	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.3
2	144409794	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.0666667
2	144409812	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.08
2	144409837	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.190476
2	144409855	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	144409875	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.2
2	144410050	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.692308
2	144471757	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.46789
2	148647364	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.153846
2	151418291	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.333333
2	151418298	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.181818
2	151418308	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.230769
2	151418388	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.307692
2	151418394	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.466667
2	151421600	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.125
2	151421612	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.214286
2	151421615	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.357143
2	151421645	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	151422593	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.181818
2	151422600	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.1875
2	151422617	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	151422639	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	151422702	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.6
2	151427706	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.3
2	159598836	A->G	-	ENSG00000123636	BAZ2B	protein_coding	Intergenic	.	.	Alu	0.2
2	159716503	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.08
2	159716529	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.192308
2	159730089	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0769231
2	159730910	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.117647
2	159730983	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.1
2	159731026	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.235294
2	159731499	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.3
2	159731564	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.25
2	159732806	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0512821
2	159732808	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0526316
2	159733316	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.105263
2	159736486	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.190476
2	159736487	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.2
2	161152630	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.125
2	161152735	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.166667
2	161153318	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.217391
2	161153450	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.206897
2	161153523	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.08
2	161153526	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.0434783
2	161153581	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.0909091
2	161153613	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.130435
2	161154825	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.08
2	161154928	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.0769231
2	161154954	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.09375
2	161157870	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.0909091
2	161166667	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0740741
2	161166673	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0408163
2	161166778	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0882353
2	161167749	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0377358
2	161167762	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.166667
2	161167764	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0555556
2	161167765	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.358491
2	161167766	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0566038
2	161167806	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0588235
2	161167815	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.32
2	161167831	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.354839
2	161167898	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.031746
2	161167900	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0454545
2	161167901	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0769231
2	161168540	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0967742
2	161168561	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0909091
2	161168575	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.304348
2	161168577	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.08
2	161168578	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.32
2	161168583	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.130435
2	161168646	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.133333
2	161168647	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.125
2	161168671	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.227273
2	161168672	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.347826
2	161168673	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.217391
2	161168677	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.304348
2	161168713	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.129032
2	161168775	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.186047
2	161168788	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0454545
2	161168790	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.047619
2	165769491	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.181818
2	168475951	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.333333
2	168475955	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.318182
2	168476008	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.272727
2	168481294	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.166667
2	169702366	A->G	+	ENSG00000213160	KLHL23	protein_coding	Intergenic	.	.	Alu	0.2
2	171156903	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.1
2	171156904	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.1
2	171749269	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
2	171749317	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
2	171749327	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
2	171749374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.541667
2	171930231	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.272727
2	171930272	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.153846
2	172585138	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.272727
2	173931272	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.05
2	173931284	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0681818
2	173931285	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0888889
2	173931615	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.153846
2	173932362	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.136364
2	173932368	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0909091
2	173932372	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.368421
2	173932447	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.125
2	173932463	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0555556
2	173932748	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.266667
2	173932749	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.2
2	173932803	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.214286
2	173932825	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.307692
2	173932844	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.166667
2	173932910	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.333333
2	173932945	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.111111
2	173932977	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.111111
2	173944313	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.133333
2	174376608	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.2
2	174577862	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.166667
2	177214540	A->G	+	ENSG00000170144	HNRNPA3	protein_coding	Intergenic	.	.	Alu	0.125
2	177237115	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.2
2	177243731	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.173913
2	177248665	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.153846
2	177249051	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.294118
2	177261349	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.526316
2	178434517	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.133333
2	178435188	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.153846
2	179260368	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.117647
2	179260372	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.25
2	179260416	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.3
2	184639348	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.3
2	184641198	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.3
2	186501781	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.142857
2	186501811	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.153846
2	191011516	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.318182
2	191011551	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.15
2	191011557	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.105263
2	191011950	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	191011983	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.133333
2	191012196	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.2
2	191012221	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.454545
2	191012353	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.176471
2	191012408	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.166667
2	196141443	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0810811
2	196141487	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.230769
2	196141496	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.105263
2	196141537	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.217391
2	196141547	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.12
2	196141643	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.272727
2	196141649	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.461538
2	196141651	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.5
2	196142082	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.06
2	196142150	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.130435
2	196142151	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0869565
2	196146250	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0416667
2	196146376	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0731707
2	196146470	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0833333
2	196156982	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0555556
2	196157010	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0588235
2	196157076	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0444444
2	196157095	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0606061
2	196158817	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0526316
2	196158822	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0606061
2	196158863	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.103448
2	196159408	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.222222
2	196159421	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0606061
2	196159578	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0487805
2	196159585	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0833333
2	196161584	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.111111
2	196161616	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.157895
2	197281134	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.1875
2	197284723	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.142857
2	197291178	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.133333
2	197292108	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.166667
2	197298769	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
2	197307907	A->G	-	ENSG00000065413	ANKRD44	protein_coding	Intergenic	.	.	Alu	0.0833333
2	197476815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	197491921	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.288889
2	197491946	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.567568
2	197492075	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.189873
2	197492113	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0677966
2	197492135	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0408163
2	197492293	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.222222
2	197492306	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0487805
2	197492327	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.423077
2	197492389	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.128205
2	197492469	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.115385
2	197495709	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.230769
2	197495714	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.384615
2	197519032	A->G	+	ENSG00000270757	HSPE1-MOB4	protein_coding	Intergenic	.	.	Alu	0.125
2	200819207	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.214286
2	200819716	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.166667
2	200852001	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
2	200852422	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
2	200855764	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.115385
2	200855765	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	200855825	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.2
2	201116011	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
2	201189349	A->G	+	ENSG00000003400	CASP10	protein_coding	Intergenic	.	.	Alu	0.363636
2	202279726	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.2
2	202280245	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202290153	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202299021	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.2
2	202886395	A->G	-	ENSG00000138442	WDR12	protein_coding	Intergenic	.	.	Alu	0.3
2	202886396	A->G	-	ENSG00000138442	WDR12	protein_coding	Intergenic	.	.	Alu	0.2
2	203298796	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203299017	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203299619	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203299620	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203300546	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.235294
2	203300628	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203300634	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203300635	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.416667
2	203300703	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.636364
2	203300704	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203300987	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.105263
2	203300996	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.105263
2	203301035	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	203301117	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203301301	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.470588
2	203301324	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203301326	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.538462
2	203301343	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	203301357	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	203301366	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	203301371	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203301383	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	203301393	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.130435
2	203301415	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203301480	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203302968	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203303267	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203303288	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	203303424	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.230769
2	203304745	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203304822	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203304829	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203304868	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203304911	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.176471
2	206082117	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206158707	A->G	-	ENSG00000023228	NDUFS1	protein_coding	Intergenic	.	.	Alu	0.4
2	207122936	A->G	-	ENSG00000118263	KLF7	protein_coding	Intergenic	.	.	Alu	0.266667
2	207143683	A->G	-	ENSG00000118263	KLF7	protein_coding	Intergenic	.	.	Alu	1
2	210003098	A->G	+	ENSG00000197713	RPE	protein_coding	Intergenic	.	.	Alu	0.275862
2	218254748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
2	218388784	A->G	+	ENSG00000018280	SLC11A1	protein_coding	Intergenic	.	.	Alu	0.0363636
2	218571318	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.105263
2	218572236	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.2
2	218572304	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.125
2	218575610	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.3
2	219072814	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
2	219177475	A->G	+	ENSG00000115649	CNPPD1	protein_coding	Intergenic	.	.	Alu	0.588235
2	222930150	A->G	+	ENSG00000123983	ACSL3	protein_coding	Intergenic	.	.	Alu	0.2
2	223756311	A->G	-	ENSG00000152056	AP1S3	protein_coding	Intergenic	.	.	Alu	0.2
2	223834468	A->G	-	ENSG00000152056	AP1S3	protein_coding	Intergenic	.	.	Alu	0.181818
2	223834495	A->G	-	ENSG00000152056	AP1S3	protein_coding	Intergenic	.	.	Alu	0.363636
2	223933722	A->G	-	ENSG00000085449	WDFY1	protein_coding	Intergenic	.	.	Alu	0.2
2	223939006	A->G	-	ENSG00000085449	WDFY1	protein_coding	Intergenic	.	.	Alu	0.190476
2	223939022	A->G	-	ENSG00000085449	WDFY1	protein_coding	Intergenic	.	.	Alu	0.105263
2	224509357	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.125
2	224517561	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224581605	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.333333
2	224581728	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.230769
2	224581775	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.1875
2	227502069	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.181818
2	227526695	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.0666667
2	229833573	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.181818
2	230715881	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.15
2	230715883	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.125
2	230716853	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.153846
2	231602655	A->G	-	.	.	.	Intergenic	.	.	Alu	0.24
2	231602656	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
2	231602777	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
2	231602804	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
2	231602839	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
2	231602849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
2	232701913	A->G	+	ENSG00000204120	GIGYF2	protein_coding	Intergenic	.	.	Alu	0.2
2	233357757	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.0588235
2	233360526	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.1
2	233361717	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.214286
2	233361816	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.2
2	233361899	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.2
2	233361929	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.333333
2	233361978	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.307692
2	233361979	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.25
2	233362003	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.5
2	233362571	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.222222
2	233362572	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.111111
2	237704256	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.047619
2	237704270	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0526316
2	237704328	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.075
2	237704351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	237704354	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0625
2	237705385	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.135135
2	237705406	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0789474
2	237705407	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.189189
2	237705463	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	237705483	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0625
2	237705507	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.09375
2	237705543	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.2
2	237705566	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0967742
2	237705585	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	237706651	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	237706659	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.175
2	237706705	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.230769
2	237706721	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.25641
2	237706728	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0930233
2	237706740	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.179487
2	237706745	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	237706753	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.3
2	237706825	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.15
2	237706828	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	237706833	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.108108
2	237710033	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0759494
2	237710034	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0666667
2	237710967	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0493827
2	237711057	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0229885
2	238273847	A->G	-	ENSG00000132326	PER2	protein_coding	Intergenic	.	.	Alu	0.153846
3	100286859	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.2
3	100286896	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.142857
3	100287161	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.2
3	100287853	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0869565
3	105848989	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.210526
3	113730214	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.25
3	113730218	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.294118
3	113766500	A->G	+	ENSG00000114573	ATP6V1A	protein_coding	Intergenic	.	.	Alu	0.166667
3	119444985	A->G	-	ENSG00000176142	TMEM39A	protein_coding	Intergenic	.	.	Alu	0.230769
3	122797778	A->G	+	ENSG00000138463	DIRC2	protein_coding	Intergenic	.	.	Alu	0.130435
3	122797838	A->G	+	ENSG00000138463	DIRC2	protein_coding	Intergenic	.	.	Alu	0.1
3	122835361	A->G	+	ENSG00000138463	DIRC2	protein_coding	Intergenic	.	.	Alu	0.272727
3	127769275	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.25
3	127770289	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.1
3	127770295	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.105263
3	127771497	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.125
3	127778795	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.333333
3	127778812	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.16
3	127778825	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.714286
3	127778854	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.8125
3	127778859	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.117647
3	127778890	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.125
3	127778892	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.6875
3	127778954	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.363636
3	127778963	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.416667
3	127779121	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.25
3	127779122	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.166667
3	127779149	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.133333
3	127779304	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.647059
3	127779305	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.235294
3	127779310	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.111111
3	127794092	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.117647
3	127794279	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.272727
3	127794323	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.117647
3	127807965	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.111111
3	128741872	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.166667
3	128744023	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	128744060	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	128747122	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.133333
3	128747212	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.142857
3	128757107	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.1
3	129168556	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
3	129225812	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	129239341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	130861083	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.5
3	130861148	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.181818
3	130872724	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.294118
3	132368777	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	132368815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
3	132368826	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
3	132368845	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
3	132368846	A->G	+	.	.	.	Intergenic	.	.	Alu	0.314286
3	132368849	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	132368929	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	132368974	A->G	+	.	.	.	Intergenic	.	.	Alu	0.564103
3	132368981	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25641
3	132368984	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	132369007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	132369020	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
3	132370153	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	132370172	A->G	+	.	.	.	Intergenic	.	.	Alu	0.28
3	132370173	A->G	+	.	.	.	Intergenic	.	.	Alu	0.291667
3	132370200	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	132370535	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	132370552	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
3	132370574	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	132370604	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	132370609	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	132370619	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	132370671	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
3	132370673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	132370675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	132370676	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	132370749	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
3	132370750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
3	132370754	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	138826947	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.2
3	138826957	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.181818
3	138832449	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.1
3	138832473	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.0952381
3	138832474	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.0952381
3	138832535	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.142857
3	138832705	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.235294
3	138832707	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.5
3	141749152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	143018040	A->G	+	ENSG00000163714	U2SURP	protein_coding	Intergenic	.	.	Alu	0.25
3	146542259	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	146543112	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.1875
3	146543116	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.4
3	150433860	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.136364
3	150433928	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.142857
3	150434032	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.2
3	150604917	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.2
3	150616846	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.5
3	152285752	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0740741
3	152285821	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0714286
3	152286965	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.294118
3	152307199	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0217391
3	152330335	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0384615
3	152378054	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.428571
3	152378096	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.133333
3	152378099	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.214286
3	152378151	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.133333
3	152378155	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.153846
3	152378158	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.153846
3	152378816	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.3
3	152378817	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.3
3	157176354	A->G	+	ENSG00000243176	AC092944.1	processed_transcript	Intergenic	.	.	Alu	0.176471
3	157441555	A->G	+	ENSG00000163661	PTX3	protein_coding	Intergenic	.	.	Alu	0.181818
3	158815028	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.131579
3	158815037	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.378378
3	160502650	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	160524603	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	160776704	A->G	+	ENSG00000163590	PPM1L	protein_coding	Intergenic	.	.	Alu	0.5
3	169971213	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0789474
3	169971284	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0540541
3	169971295	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0571429
3	169972662	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0967742
3	169986771	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.235294
3	169986826	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.192308
3	169986840	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.192308
3	169986867	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0952381
3	169987185	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.136364
3	169987218	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.3
3	169987227	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.166667
3	169987236	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.272727
3	169987338	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.25
3	172050523	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.04
3	172050589	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0357143
3	172051114	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	172051183	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0327869
3	172051184	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.031746
3	172051201	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0731707
3	172051202	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0714286
3	172051223	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1
3	172052108	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.117647
3	172052184	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0344828
3	172052185	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0689655
3	172052325	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.04
3	172053538	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0740741
3	172053547	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.09375
3	172053552	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0666667
3	172053651	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	172053652	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	172053693	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1
3	172064020	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0645161
3	172064129	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0526316
3	172080512	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	172080530	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0588235
3	172136867	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.190476
3	172136902	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0769231
3	172137388	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0909091
3	172137490	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172137494	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.111111
3	172137509	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.105263
3	172137571	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1
3	172147052	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172165278	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.272727
3	172700570	A->G	-	ENSG00000144959	NCEH1	protein_coding	Intergenic	.	.	Alu	0.272727
3	172700706	A->G	-	ENSG00000144959	NCEH1	protein_coding	Intergenic	.	.	Alu	0.230769
3	172700707	A->G	-	ENSG00000144959	NCEH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	177148529	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	177167743	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	177167782	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	177167809	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	177167835	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.117647
3	177167873	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.307692
3	177168509	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.3
3	177180910	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177180934	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	177189473	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	177191927	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	177191945	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	180920677	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	180920685	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	180947178	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	180950944	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.266667
3	180950955	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.25
3	180952460	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.2
3	182820422	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.363636
3	182833384	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.272727
3	182833419	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.285714
3	182833425	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.157895
3	182833453	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	182871177	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.166667
3	182871242	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.307692
3	182871247	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.214286
3	185747434	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.5
3	185747435	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.25
3	185771006	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.272727
3	185771018	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.2
3	193616141	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.285714
3	193616151	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.2
3	193629043	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.142857
3	194464834	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.1
3	195520535	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.272727
3	195520792	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.363636
3	195527247	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.166667
3	196057709	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.130435
3	196069082	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.230769
3	196070504	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.428571
3	196070525	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.117647
3	196070695	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.294118
3	196070931	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.12766
3	196079577	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.153846
3	196080317	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.25
3	196080320	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.272727
3	196398737	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.2
3	196399450	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.2
3	196658742	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.2
3	196658757	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.230769
3	197613020	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
3	197613046	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
4	102342387	A->G	-	ENSG00000138821	SLC39A8	protein_coding	Intergenic	.	.	Alu	0.05
4	102511403	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	102512466	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.142857
4	102703228	A->G	-	ENSG00000109323	MANBA	protein_coding	Intergenic	.	.	Alu	0.2
4	102754695	A->G	-	ENSG00000109323	MANBA	protein_coding	Intergenic	.	.	Alu	0.0869565
4	102754782	A->G	-	ENSG00000109323	MANBA	protein_coding	Intergenic	.	.	Alu	0.2
4	102757157	A->G	-	ENSG00000109323	MANBA	protein_coding	Intergenic	.	.	Alu	0.0909091
4	105151968	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0769231
4	105152016	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0857143
4	105152736	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.181818
4	105154770	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0555556
4	105157881	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0909091
4	105159761	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.117647
4	105186045	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.230769
4	105186646	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.2
4	108623537	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.153846
4	108623539	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.357143
4	108623616	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.230769
4	108626984	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.454545
4	108626985	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.454545
4	109482757	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.2
4	118592221	A->G	+	ENSG00000260404	AC110079.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
4	118612037	A->G	+	ENSG00000260404	AC110079.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
4	118694935	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.333333
4	118701317	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.181818
4	118701454	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.285714
4	139020802	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.181818
4	139046042	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.025
4	139046065	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0338983
4	139046129	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0958904
4	139046593	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.206897
4	139046650	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.09375
4	139046699	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.454545
4	139046709	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.3
4	139046776	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.461538
4	139046836	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0666667
4	139047337	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.103448
4	139047440	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0357143
4	139047444	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0333333
4	139168814	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139168818	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139168820	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139168840	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139169156	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.117647
4	139170428	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139170437	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139170468	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139171143	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.285714
4	139171167	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139171170	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139171318	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.285714
4	139171319	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139171743	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.157895
4	139171780	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.117647
4	139171824	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.222222
4	139171837	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.238095
4	139171841	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.35
4	139171877	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.1
4	139171883	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.176471
4	139171910	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139339293	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.181818
4	143542889	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.1875
4	143542953	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.142857
4	145096790	A->G	-	ENSG00000164162	ANAPC10	protein_coding	Intergenic	.	.	Alu	0.181818
4	145096822	A->G	-	ENSG00000164162	ANAPC10	protein_coding	Intergenic	.	.	Alu	0.181818
4	145096823	A->G	-	ENSG00000164162	ANAPC10	protein_coding	Intergenic	.	.	Alu	0.272727
4	145125347	A->G	+	ENSG00000164163	ABCE1	protein_coding	Intergenic	.	.	Alu	0.181818
4	151109489	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	151109495	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	152505878	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.3
4	158779631	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.230769
4	158779797	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.4
4	158779866	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.111111
4	158791544	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intergenic	.	.	Alu	0.2
4	159108798	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.153846
4	159108805	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	159108812	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	159109282	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	159110442	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	165234887	A->G	+	ENSG00000109466	KLHL2	protein_coding	Intergenic	.	.	Alu	0.2
4	165242609	A->G	+	ENSG00000109466	KLHL2	protein_coding	Intergenic	.	.	Alu	0.2
4	168384425	A->G	-	ENSG00000181381	DDX60L	protein_coding	Intergenic	.	.	Alu	0.153846
4	173328643	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.166667
4	173328644	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.166667
4	173328652	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.272727
4	173328734	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.692308
4	176325844	A->G	+	ENSG00000129128	SPCS3	protein_coding	Intergenic	.	.	Alu	0.3125
4	184777372	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.363636
4	184777375	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.333333
4	184780145	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.117647
4	184781055	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.272727
4	184781086	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	184781169	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.04
4	184781179	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.205882
4	184799603	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0408163
4	184799644	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0526316
4	184799645	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0882353
4	184799682	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.181818
4	184799732	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.125
4	184799733	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.125
4	184799787	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.28
4	184799789	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.391304
4	184799792	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.130435
4	184822487	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0243902
4	184822552	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.111111
4	184822571	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.190476
4	184822595	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.171171
4	184822615	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0342466
4	184822622	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0457516
4	184822630	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.04
4	184822639	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0205479
4	184822644	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0264901
4	184822657	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.162791
4	184822704	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0762712
4	184822733	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.4
4	184822802	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0625
4	184822823	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0566038
4	184822829	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0555556
4	184822847	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.109756
4	184822864	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0571429
4	184822867	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.126761
4	184822894	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.197183
4	184822908	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.203704
4	184822932	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.113924
4	184823734	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.060241
4	184823781	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.375
4	184823797	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0574713
4	184823799	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0823529
4	184823819	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.09
4	184823826	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.118812
4	184824208	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0884956
4	184824222	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0393701
4	184824264	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0229885
4	184824270	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0707071
4	184824286	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.107527
4	184824290	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0208333
4	184824300	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0267857
4	184824309	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0365854
4	184824320	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0337079
4	184824369	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0958904
4	184824391	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0238095
4	184824394	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0243902
4	184824399	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.037037
5	100849547	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.2
5	100849565	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.153846
5	100854394	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.25
5	111509786	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.222222
5	119270472	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	Intergenic	.	.	Alu	0.125
5	119379694	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	Intergenic	.	.	Alu	0.181818
5	119379695	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	Intergenic	.	.	Alu	0.181818
5	122031404	A->G	+	ENSG00000151304	SRFBP1	protein_coding	Intergenic	.	.	Alu	0.3125
5	122803937	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.363636
5	122803938	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.727273
5	122804019	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.1875
5	122804024	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.25
5	122804048	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.133333
5	122804067	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.277778
5	122804465	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	122804466	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.238095
5	122804495	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.111111
5	122804499	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.933333
5	122804569	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.142857
5	122804571	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.625
5	122807030	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.363636
5	122807031	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.545455
5	122829457	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.25
5	122829467	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.166667
5	126975190	A->G	-	ENSG00000173926	3-Mar	protein_coding	Intergenic	.	.	Alu	0.928571
5	131161407	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.117647
5	131161447	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.111111
5	131161532	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.105263
5	131266508	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131268880	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131287604	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131287988	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131287989	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.5
5	131288058	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131288062	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.5
5	131288143	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3
5	131288163	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.454545
5	131288179	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.333333
5	131288526	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131288531	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131288572	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131290017	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.214286
5	131290130	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131353107	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131353108	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1875
5	131353376	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131353491	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131763923	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.272727
5	131765181	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.117647
5	131777014	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.4
5	131793302	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.125
5	131793314	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.181818
5	132900441	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132914024	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	132914025	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.272727
5	132914065	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.25
5	132914080	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132914090	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132915787	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132961410	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.230769
5	132961412	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	134162964	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.7
5	134198927	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.181818
5	134206653	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.157895
5	134207665	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.111111
5	134207782	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.142857
5	134215173	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.4
5	134220287	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.2
5	134377925	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.125
5	134378040	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.5
5	134379964	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.428571
5	134379980	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.25
5	134379990	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.142857
5	134379996	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.25
5	134380009	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134381280	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134381864	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	138517972	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138517985	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.133333
5	138518379	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.235294
5	138518388	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.222222
5	138518391	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.294118
5	138518393	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.375
5	138527083	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.181818
5	138570146	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.5
5	138570282	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.25
5	138571345	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0869565
5	138573208	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.1
5	138573211	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.153846
5	138573302	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.08
5	138573317	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.142857
5	138573318	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0952381
5	138573404	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.142857
5	138573416	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0869565
5	138573478	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.272727
5	138573564	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.166667
5	139277096	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.470588
5	139277219	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.538462
5	139277245	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.222222
5	139277264	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.277778
5	139277265	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.588235
5	139277279	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.105263
5	139277283	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.105263
5	139278016	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.307692
5	139278050	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.117647
5	139278059	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.142857
5	139278068	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.1
5	139278078	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.352941
5	139278079	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.117647
5	139278086	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.75
5	139278134	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.117647
5	139278171	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.117647
5	139295910	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.105263
5	139295917	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.105263
5	139295927	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.363636
5	139295928	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0909091
5	139297083	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.153846
5	139297093	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.266667
5	139297103	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.214286
5	139303176	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.25
5	139303188	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.142857
5	139303243	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.153846
5	139321262	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.153846
5	139321627	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.266667
5	139323823	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.133333
5	139323836	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.210526
5	139323840	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.222222
5	139328858	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.181818
5	139347077	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.272727
5	141594580	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.111111
5	141601381	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.133333
5	141610038	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.133333
5	141610041	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.125
5	141610087	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.192308
5	141611232	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.125
5	141611542	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.266667
5	142806117	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.117647
5	142815869	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.0952381
5	142844190	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.4
5	142844196	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.230769
5	142844762	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.2
5	142875933	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.166667
5	142895491	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.133333
5	142895492	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.133333
5	142895811	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.545455
5	142969214	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.2
5	147778193	A->G	-	ENSG00000176049	JAKMIP2	protein_coding	Intergenic	.	.	Alu	0.214286
5	147778233	A->G	-	ENSG00000176049	JAKMIP2	protein_coding	Intergenic	.	.	Alu	0.352941
5	149531981	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.153846
5	149532056	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.166667
5	149541444	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.153846
5	149543830	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.222222
5	149543900	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.111111
5	149547944	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.12
5	149547985	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.05
5	149548008	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0731707
5	149548090	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149548138	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.193548
5	149548166	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	149548323	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.04
5	149548332	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0961538
5	149548341	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0566038
5	149548350	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0508475
5	149548401	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.196078
5	149548484	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	149548491	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	149548564	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.115385
5	149548727	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.225806
5	149548762	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	149548766	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.105263
5	149548787	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0434783
5	149548792	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0652174
5	149548854	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0465116
5	150397096	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.181818
5	150409111	A->G	-	ENSG00000019582	CD74	protein_coding	Intergenic	.	.	Alu	0.0909091
5	150409679	A->G	-	ENSG00000019582	CD74	protein_coding	Intergenic	.	.	Alu	0.111111
5	150412102	A->G	-	ENSG00000019582	CD74	protein_coding	Intergenic	.	.	Alu	0.045045
5	150412129	A->G	-	ENSG00000019582	CD74	protein_coding	Intergenic	.	.	Alu	0.0373832
5	150412202	A->G	-	ENSG00000019582	CD74	protein_coding	Intergenic	.	.	Alu	0.0206186
5	150487369	A->G	+	ENSG00000070614	NDST1	protein_coding	Intergenic	.	.	Alu	0.210526
5	150754868	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.1
5	151043656	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.25
5	151043663	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.230769
5	151044241	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	151057568	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	151073005	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.272727
5	151077116	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	1
5	151271784	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
5	151271865	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
5	151272055	A->G	+	.	.	.	Intergenic	.	.	Alu	0.027027
5	151726767	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
5	151729123	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
5	154866210	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.181818
5	154866287	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.2
5	154866301	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.25
5	169708626	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.3
5	169708830	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.181818
5	169812233	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.230769
5	169860234	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.2
5	170264675	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.2
5	170264677	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.1875
5	170265151	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.285714
5	172116854	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.3
5	172174296	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.117647
5	172175194	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.153846
5	172175195	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.153846
5	172175216	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.214286
5	172175225	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.133333
5	172182649	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.142857
5	172182650	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.142857
5	172182714	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.142857
5	172182895	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.1
5	172183079	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.176471
5	172183085	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.333333
5	172183107	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.3
5	172183193	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.117647
5	172185366	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.0869565
5	172185379	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.0769231
5	172185401	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.0645161
5	172185407	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.129032
5	172185433	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.0606061
5	172185446	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.08
5	172185451	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	172185516	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.0625
5	172186179	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.106383
5	172186191	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.0833333
5	172186367	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.075
5	172186506	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.122449
5	172186539	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.047619
5	172838694	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.111111
5	172838700	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.136364
5	172839085	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.181818
5	172986572	A->G	+	ENSG00000113732	ATP6V0E1	protein_coding	Intergenic	.	.	Alu	0.153846
5	172987047	A->G	+	ENSG00000254328	AC008429.4	processed_pseudogene	Intergenic	.	.	Alu	0.2
5	176449322	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.181818
5	176993392	A->G	-	ENSG00000087206	UIMC1	protein_coding	Intergenic	.	.	Alu	0.166667
5	176993805	A->G	-	ENSG00000087206	UIMC1	protein_coding	Intergenic	.	.	Alu	0.133333
5	177003967	A->G	-	ENSG00000087206	UIMC1	protein_coding	Intergenic	.	.	Alu	0.214286
5	177003993	A->G	-	ENSG00000087206	UIMC1	protein_coding	Intergenic	.	.	Alu	0.166667
5	179701073	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.230769
5	179701128	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.153846
5	179701339	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.166667
5	179701409	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.2
5	179710276	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.105263
5	179710280	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.1
5	179826762	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0789474
5	179830912	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.103448
5	179830970	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0350877
5	179831646	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.111111
5	179831987	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.428571
5	179831990	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.428571
5	180033199	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
6	107955301	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.454545
6	107955309	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.6
6	107955642	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	108570462	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.0909091
6	108570469	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.0952381
6	108570563	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.0714286
6	108584757	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.3125
6	108584780	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.571429
6	108584826	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.545455
6	108993859	A->G	-	ENSG00000080546	SESN1	protein_coding	Intergenic	.	.	Alu	0.0952381
6	108995748	A->G	-	ENSG00000080546	SESN1	protein_coding	Intergenic	.	.	Alu	0.125
6	108995750	A->G	-	ENSG00000080546	SESN1	protein_coding	Intergenic	.	.	Alu	0.111111
6	109482613	A->G	-	ENSG00000112365	ZBTB24	protein_coding	Intergenic	.	.	Alu	0.142857
6	110879248	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.214286
6	110882976	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.133333
6	110883045	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.105263
6	110884452	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.133333
6	110885493	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.105263
6	110896704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	110896740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110897045	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
6	110897719	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
6	110967997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
6	117681852	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.133333
6	117685500	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.142857
6	117685541	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.3125
6	117685587	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.166667
6	122466122	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.142857
6	132686074	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0857143
6	132686326	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.130435
6	132686362	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.05
6	132686385	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0576923
6	132686386	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0384615
6	132686491	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.142857
6	132686546	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0526316
6	132688922	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0769231
6	132688924	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0769231
6	132688931	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.137931
6	132689010	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.117647
6	132689026	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.277778
6	132689027	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.235294
6	132689089	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.177778
6	132689113	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0666667
6	132689128	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.116279
6	132689137	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.05
6	132689158	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0377358
6	132691767	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0649351
6	132691780	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0714286
6	132691793	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0384615
6	132691794	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0377358
6	132691813	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.208333
6	132691832	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0512821
6	132691884	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0606061
6	132691886	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.121212
6	132691896	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0606061
6	132691899	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.0645161
6	132691921	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.111111
6	132691925	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.103448
6	132691977	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.09375
6	132709581	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.2
6	132712329	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.142857
6	132755576	A->G	-	ENSG00000112303	VNN2	protein_coding	Intergenic	.	.	Alu	0.2
6	136256068	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
6	136256119	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
6	136256251	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	136635643	A->G	-	ENSG00000234263	AL024508.1	antisense	Intergenic	.	.	Alu	0.2
6	136786308	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0746269
6	136786863	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.433962
6	136786874	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.283333
6	136786898	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.272727
6	136786904	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0273973
6	136786917	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.189189
6	136786922	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.047619
6	136787134	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.039604
6	136787172	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0252101
6	136789069	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.242424
6	136789072	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0588235
6	136789081	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0444444
6	136789114	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.384615
6	136789168	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.153846
6	136789182	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.1
6	136789188	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0909091
6	136789195	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.227273
6	136789216	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.227273
6	136789228	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.238095
6	136789256	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0666667
6	136789833	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0967742
6	137210206	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.111111
6	137210267	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.230769
6	137210272	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.230769
6	137212395	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.115385
6	137212396	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.130435
6	137215850	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.0425532
6	137215875	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.047619
6	137216831	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.0727273
6	137216839	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.12963
6	137217967	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.123077
6	137217989	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.139535
6	137870337	A->G	+	ENSG00000118503	TNFAIP3	protein_coding	Intergenic	.	.	Alu	0.0263158
6	139140997	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.153846
6	139142133	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.461538
6	144163317	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.075
6	144163578	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.115385
6	144163674	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.142857
6	144164730	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.307692
6	144164749	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.294118
6	144164755	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.388889
6	144164757	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.277778
6	144164780	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.105263
6	144174645	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.0714286
6	144174871	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.0740741
6	144174914	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.125
6	144174950	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.0909091
6	144174955	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.105263
6	144175029	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.136364
6	144175143	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.2
6	144175162	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.16
6	144175168	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.0952381
6	144179023	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.0576923
6	146545060	A->G	+	ENSG00000118508	RAB32	protein_coding	Intergenic	.	.	Alu	0.0740741
6	147211189	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.222222
6	147211622	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.5
6	147211712	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.1875
6	149539666	A->G	-	ENSG00000131013	PPIL4	protein_coding	Intergenic	.	.	Alu	0.318182
6	149592874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
6	149592876	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	149704275	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.133333
6	149704276	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.133333
6	149751062	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.153846
6	149751067	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.153846
6	149751223	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.142857
6	149751237	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.461538
6	149751238	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.461538
6	149751267	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.153846
6	149751551	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.434783
6	149751647	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.0952381
6	149752433	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.117647
6	149755224	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.214286
6	149755342	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.157895
6	149755368	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.230769
6	149755371	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.363636
6	149756428	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.0833333
6	149760793	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.133333
6	154735583	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.0952381
6	154735600	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.2
6	154736374	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.153846
6	154739066	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.3125
6	154752822	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.3
6	154752826	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.3
6	154772568	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.4
6	157876332	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.133333
6	158779696	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.214286
6	158779758	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.142857
6	158780020	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.2
6	158780100	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.285714
6	158780131	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.166667
6	158780144	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.111111
6	159687363	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.142857
6	159735265	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.2
6	159735278	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.636364
6	159735280	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.166667
6	159735326	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.5
6	159735338	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.133333
6	159735341	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.611111
6	159735350	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.105263
6	159735401	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.2
6	159735402	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.272727
6	159735413	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.153846
6	159735495	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.25
6	159735496	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.5
6	159735559	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.277778
6	159742794	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.142857
6	159752840	A->G	+	ENSG00000285441	SOD2	protein_coding	Intergenic	.	.	Alu	0.117647
6	159971725	A->G	+	ENSG00000197081	IGF2R	protein_coding	Intergenic	.	.	Alu	0.117647
6	159971895	A->G	+	ENSG00000197081	IGF2R	protein_coding	Intergenic	.	.	Alu	0.176471
6	163422495	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.125
6	163424836	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.1875
6	163479613	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.105263
6	163493339	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.125
6	163493583	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.133333
7	100343943	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	100344020	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.7
7	100344031	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
7	100369035	A->G	-	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.125
7	100377625	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.266667
7	100377639	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.2
7	100386069	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.181818
7	100386072	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.166667
7	101086346	A->G	+	ENSG00000169871	TRIM56	protein_coding	Intergenic	.	.	Alu	0.0740741
7	101086444	A->G	+	ENSG00000169871	TRIM56	protein_coding	Intergenic	.	.	Alu	0.105263
7	104942295	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0441176
7	104942429	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.111111
7	104942574	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.2
7	104942710	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0625
7	104942746	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0638298
7	104942747	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0416667
7	104943210	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.2
7	104943253	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.222222
7	104943263	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.15
7	105028566	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0952381
7	105029083	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105029112	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.185185
7	105029113	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.111111
7	105029143	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0833333
7	105031118	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105031123	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105034259	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1
7	105042021	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.130435
7	105042056	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1875
7	105042120	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.111111
7	105042156	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.08
7	105042191	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.08
7	105042200	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0666667
7	105042225	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0571429
7	105042238	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0740741
7	105043829	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
7	105043841	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.133333
7	105048115	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105048116	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0833333
7	105048178	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.392857
7	105048317	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.107143
7	105049264	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105049364	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105051445	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.636364
7	105057498	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105057544	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105057574	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0909091
7	105057688	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0952381
7	105067851	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.214286
7	105070369	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.153846
7	105071428	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.363636
7	105079973	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.363636
7	105080115	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.153846
7	105080882	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.222222
7	105080953	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.117647
7	105085879	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	107747403	A->G	+	ENSG00000105879	CBLL1	protein_coding	Intergenic	.	.	Alu	0.8
7	108478671	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.08
7	108496178	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.142857
7	108497907	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.166667
7	112345495	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.2
7	112455424	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.181818
7	112455435	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.166667
7	112460303	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.1
7	112787476	A->G	-	ENSG00000146802	TMEM168	protein_coding	Intergenic	.	.	Alu	0.2
7	116875570	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.4
7	116876129	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.363636
7	116891718	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.230769
7	116916447	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.117647
7	120954315	A->G	+	ENSG00000071243	ING3	protein_coding	Intergenic	.	.	Alu	0.181818
7	120954351	A->G	+	ENSG00000071243	ING3	protein_coding	Intergenic	.	.	Alu	0.307692
7	128574862	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	128631721	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0512821
7	128631768	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
7	128632949	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
7	128653262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
7	128659276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
7	128659296	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
7	128864089	A->G	+	ENSG00000128524	ATP6V1F	protein_coding	Intergenic	.	.	Alu	0.0952381
7	129896075	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129900018	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.454545
7	129941407	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.230769
7	130889816	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.2
7	130898711	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.181818
7	130932387	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.133333
7	130954541	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1
7	130954558	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.133333
7	130954572	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.105263
7	130954575	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.111111
7	130957813	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0810811
7	130957836	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.115385
7	130957858	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0606061
7	130957969	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0606061
7	130957983	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0606061
7	130958017	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0625
7	130958503	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0465116
7	131100482	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.2
7	139073066	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.2
7	139073099	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.363636
7	139073104	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.181818
7	139073670	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.333333
7	139076726	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.2
7	139080519	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0588235
7	139096922	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.142857
7	139097081	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.2
7	139102416	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.166667
7	139390361	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.166667
7	139393630	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139393644	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.307692
7	139395664	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139395741	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.142857
7	139395882	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.583333
7	139419632	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0526316
7	139836677	A->G	+	ENSG00000059377	TBXAS1	protein_coding	Intergenic	.	.	Alu	0.25
7	140464648	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140464955	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	140467348	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.272727
7	140467362	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.142857
7	140470841	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	140471673	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.4
7	140888796	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.416667
7	140917544	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.142857
7	143299053	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.4
7	143299084	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.230769
7	148811279	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.272727
7	148811289	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.230769
7	148811295	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	148827928	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.25
7	148828082	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.153846
7	148843262	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.214286
7	148858664	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.363636
7	150760334	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0612245
7	150760337	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0851064
7	151500859	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.190476
7	151500862	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.142857
7	151510844	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.0606061
7	151510861	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.0857143
7	151510862	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.0571429
7	151511819	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.133333
7	151846250	A->G	-	ENSG00000106617	PRKAG2	protein_coding	Intergenic	.	.	Alu	0.2
7	152406791	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.272727
7	152409023	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152409137	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.214286
7	152409142	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152409206	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152409226	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.454545
7	152409234	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.230769
7	152409286	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152424265	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152424520	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152425412	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152430584	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.3125
7	152430663	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.466667
7	152430670	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.538462
7	152430813	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.227273
7	152431409	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.227273
7	152432964	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.176471
7	152433026	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152433104	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.12
7	157343072	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0740741
7	157343340	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.142857
7	157343629	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.181818
7	157344079	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.333333
7	157351899	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.3
7	157359604	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.142857
7	157373565	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.025641
7	158738470	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158738481	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158738646	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.538462
7	158738647	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.538462
7	158738655	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158790676	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158790682	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158790724	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.111111
7	158790725	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.222222
7	158790755	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.4
7	158790773	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.363636
7	158790845	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.214286
7	158790889	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.142857
7	158792406	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158797239	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
7	158797245	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158797349	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.230769
7	158823036	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0625
7	158823048	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0697674
7	158823081	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.116279
7	158823082	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.119048
7	158823531	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.230769
7	158823598	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.56
7	158823599	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158825185	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.047619
8	100713582	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0754717
8	100713683	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0338983
8	100713719	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0506329
8	100713720	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0506329
8	100713773	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.111111
8	100714539	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.175
8	100714634	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	100716159	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.106383
8	100716160	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.12766
8	100716179	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.04
8	100716230	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0454545
8	100716236	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.225
8	100716239	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0652174
8	100716256	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0545455
8	100716279	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.23913
8	100716289	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0425532
8	100716314	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0344828
8	100717113	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.1875
8	100717117	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	100717148	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.238095
8	100717149	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.214286
8	100717175	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.111111
8	100717215	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.285714
8	100717221	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.266667
8	100927293	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0789474
8	100927442	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.111111
8	100928090	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.25
8	100928266	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.2
8	100929311	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.166667
8	100929337	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.176471
8	100929356	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.111111
8	100929425	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.142857
8	100930167	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0555556
8	100930195	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0666667
8	100930227	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0666667
8	100935483	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.529412
8	100936791	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0487805
8	102407615	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102650920	A->G	-	ENSG00000155090	KLF10	protein_coding	Intergenic	.	.	Alu	0.037037
8	102650922	A->G	-	ENSG00000155090	KLF10	protein_coding	Intergenic	.	.	Alu	0.037037
8	102840489	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.133333
8	102840491	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.133333
8	102849171	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.0512821
8	102853380	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.2
8	102853450	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.352941
8	102853471	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.230769
8	102854140	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.153846
8	102854170	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.153846
8	102979236	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.117647
8	102981783	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.1875
8	102981795	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.125
8	102981872	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.2
8	102982932	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.142857
8	102983089	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.125
8	102983094	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.125
8	102987627	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.117647
8	102991932	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.25
8	109471878	A->G	+	ENSG00000205038	PKHD1L1	protein_coding	Intergenic	.	.	Alu	1
8	115639752	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.2
8	123379077	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.166667
8	123379079	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.272727
8	124369169	A->G	-	ENSG00000164983	TMEM65	protein_coding	Intergenic	.	.	Alu	0.413793
8	124542235	A->G	+	ENSG00000147684	NDUFB9	protein_coding	Intergenic	.	.	Alu	0.133333
8	124696259	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.153846
8	124696260	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.153846
8	124696596	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0333333
8	124696605	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.132075
8	124696688	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.133333
8	124697325	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.111111
8	124697372	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.176471
8	124697394	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.166667
8	124697397	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.25
8	124698577	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.142857
8	124717611	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	124717612	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	128016496	A->G	+	ENSG00000249859	PVT1	lincRNA	Intergenic	.	.	Alu	0.3
8	129902357	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	129966036	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.272727
8	129966039	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.416667
8	129966606	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	129966612	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.5
8	129990576	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.384615
8	130002202	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1
8	130002204	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1
8	130002922	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.157895
8	130002923	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.157895
8	130353613	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	130353625	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.114286
8	130353635	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0857143
8	130353667	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	130353687	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.5
8	130353704	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.176471
8	130353706	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.190476
8	130353746	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.125
8	130353748	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	130353776	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.114286
8	130353788	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	130353795	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.515152
8	130353814	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.175
8	130353819	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.15
8	130353949	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.26087
8	130353998	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	130354025	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	130354070	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	130354091	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	130354119	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.4
8	130354162	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.1
8	130354958	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0416667
8	130354961	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.031746
8	130354964	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0333333
8	130355024	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0666667
8	130355106	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	131909289	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.117647
8	131909350	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.172414
8	131909369	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.08
8	131909466	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.333333
8	131910376	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.142857
8	131910411	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.133333
8	131910413	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.25
8	131910456	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.125
8	133277338	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.125
8	133277346	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	133279006	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	133279122	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.125
8	133280663	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.181818
8	133280707	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.133333
8	133280708	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.2
8	133280714	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.166667
8	133281122	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	133553719	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.5
8	133562039	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.277778
8	133562076	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.2
8	133562321	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.1875
8	134827114	A->G	-	.	.	.	Intergenic	.	.	Alu	0.172414
8	134827144	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
8	134827167	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
8	134827168	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
8	134827287	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
8	134827668	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
8	140610153	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.6
8	141143431	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.153846
8	141143534	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.1875
8	141143570	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.166667
8	141168625	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.133333
8	144292894	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.0512821
9	100071852	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.2
9	104857088	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.133333
9	104859859	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.214286
9	104861029	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104861031	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.333333
9	104866610	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	104887231	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.107143
9	104890690	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.157895
9	104897741	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.133333
9	104897882	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0869565
9	104898385	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0714286
9	104898404	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	104912337	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0588235
9	104912355	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0526316
9	104912363	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0571429
9	104914221	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	104914294	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.291667
9	104914314	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.137931
9	104914334	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.117647
9	104914378	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.137931
9	104914456	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.25
9	104914461	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	104919444	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.142857
9	104919511	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.133333
9	104919526	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.157895
9	104919529	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0789474
9	104919536	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.2
9	104920597	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.5
9	104920621	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.107143
9	104920649	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0606061
9	104920679	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0689655
9	104920691	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.136364
9	104920785	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.206897
9	104922808	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0625
9	104922890	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0487805
9	104922936	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0425532
9	104924407	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0384615
9	105706918	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.0740741
9	108974744	A->G	-	ENSG00000119326	CTNNAL1	protein_coding	Intergenic	.	.	Alu	0.181818
9	110054807	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.3
9	110246027	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.153846
9	112039288	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
9	112039414	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	112040209	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
9	112040260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
9	112040302	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
9	112040304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	112328707	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.214286
9	112475058	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.125
9	112475072	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.105263
9	112475169	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.181818
9	112475236	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.181818
9	113154103	A->G	+	ENSG00000136867	SLC31A2	protein_coding	Intergenic	.	.	Alu	0.125
9	113171408	A->G	+	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.2
9	113217353	A->G	-	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.166667
9	113217381	A->G	-	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.105263
9	113217755	A->G	-	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.2
9	114589838	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.333333
9	114590077	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.166667
9	114593877	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.214286
9	114593889	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.133333
9	114594337	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.2
9	120784432	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.272727
9	120784446	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.4
9	120785817	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.2
9	121067318	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	122902704	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.272727
9	122902752	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.230769
9	122902766	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.176471
9	122902769	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.181818
9	122902770	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.181818
9	122902776	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.3
9	122902807	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.166667
9	125765359	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.142857
9	125799385	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.142857
9	125799488	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.214286
9	125800883	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.133333
9	125818680	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.307692
9	125818681	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.153846
9	125835774	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.4
9	125838312	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.166667
9	125838318	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	126813074	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.133333
9	127564171	A->G	-	ENSG00000136830	FAM129B	protein_coding	Intergenic	.	.	Alu	0.181818
9	127773806	A->G	-	ENSG00000095370	SH2D3C	protein_coding	Intergenic	.	.	Alu	0.4
9	127773823	A->G	-	ENSG00000095370	SH2D3C	protein_coding	Intergenic	.	.	Alu	0.166667
9	127778084	A->G	-	ENSG00000095370	SH2D3C	protein_coding	Intergenic	.	.	Alu	0.2
9	127778103	A->G	-	ENSG00000095370	SH2D3C	protein_coding	Intergenic	.	.	Alu	0.153846
9	127778380	A->G	-	ENSG00000095370	SH2D3C	protein_coding	Intergenic	.	.	Alu	0.235294
9	127791374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127791388	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
9	127791408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
9	127791680	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
9	127792449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	128075086	A->G	+	ENSG00000148339	SLC25A25	protein_coding	Intergenic	.	.	Alu	0.181818
9	129954738	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129954740	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0833333
9	129954771	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.190476
9	129954894	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	129955269	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.214286
9	129955306	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.1875
9	129955398	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129955437	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.25
9	129955487	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	130016660	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.428571
9	130016667	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	130705069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	130706156	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	130706157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
9	130706472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	130706705	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
9	130706730	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130706808	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
9	130706862	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
9	131400153	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131439967	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131708901	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.3
9	131708902	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.2
9	131738065	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.2
9	132344286	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.333333
9	132344311	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.2
9	132344352	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.181818
9	132344378	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.2
9	132344382	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.2
9	132345870	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.166667
9	132345907	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.1875
9	132345933	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.230769
9	132346029	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.181818
9	133111463	A->G	-	ENSG00000160271	RALGDS	protein_coding	Intergenic	.	.	Alu	0.0909091
9	134904528	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0420561
9	134904591	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0837989
9	134904693	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0204082
9	134904766	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
9	134904776	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
9	134904777	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
9	134905556	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0564516
9	134905560	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0252101
9	134905576	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0512821
9	134905607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0208333
9	134905612	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0224719
9	134905655	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0263158
9	134905718	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
9	136479880	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.153846
9	136479940	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.133333
9	136479945	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.166667
10	101810884	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101810885	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101810886	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.307692
10	101810918	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.142857
10	101810923	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.190476
10	101810928	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.157895
10	101810942	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0909091
10	101810963	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.117647
10	101811240	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.153846
10	101811241	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.153846
10	101811264	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.5625
10	101811289	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101811500	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.142857
10	101811578	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.111111
10	101811670	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.333333
10	101811678	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.111111
10	102816631	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
10	103164123	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.214286
10	103164129	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.411765
10	103167674	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.214286
10	103169551	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103172735	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103172742	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.4
10	103172828	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.272727
10	103173373	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103177673	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.105263
10	103177686	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103177732	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	103178037	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.129032
10	103178038	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103178050	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103178336	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103178343	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103178377	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	103179619	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.137931
10	103179669	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103179688	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103180487	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.136364
10	103180506	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0769231
10	103180564	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0740741
10	103180565	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0740741
10	103180619	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0625
10	103180623	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0588235
10	103189544	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	104257475	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.0588235
10	104325671	A->G	-	ENSG00000228261	AL162742.1	lincRNA	Intergenic	.	.	Alu	0.3
10	104331848	A->G	-	ENSG00000148841	ITPRIP	protein_coding	Intergenic	.	.	Alu	0.4
10	110925557	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.318182
10	110925558	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.545455
10	110925622	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.08
10	110925623	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0833333
10	110925692	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0526316
10	110925693	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.157895
10	110925695	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0555556
10	110925734	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0555556
10	117371323	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.2
10	117371938	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.181818
10	119064003	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119072521	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.388889
10	119072525	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.315789
10	119072577	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.117647
10	119072591	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.3125
10	119075189	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119105807	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119105814	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.153846
10	119176929	A->G	-	ENSG00000165672	PRDX3	protein_coding	Intergenic	.	.	Alu	0.3
10	123002736	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.2
10	124660102	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.181818
10	124662619	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.153846
10	124923047	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.7
10	124923100	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.166667
10	124923166	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.133333
10	124923212	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.25
10	128051963	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0434783
10	128051975	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0731707
10	128051980	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0512821
10	128051988	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.075
10	128051992	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.136364
10	128053015	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0384615
10	128053053	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0333333
10	128053063	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.031746
10	128053088	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0588235
10	128053100	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0377358
10	128053108	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.113208
10	128053131	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0677966
10	128053144	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0689655
10	128053160	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0289855
10	128053166	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.212121
10	128053171	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0350877
10	128053183	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.09375
10	128053226	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.107143
10	128053233	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.037037
10	128053854	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.2
10	128053900	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.166667
10	128054574	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.481481
10	128054657	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.533333
10	128054658	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.2
10	133264158	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.181818
10	133265571	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.166667
10	133265597	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.545455
10	133294713	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.133333
10	133296658	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.153846
10	133296660	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.142857
10	133296767	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.454545
10	133296771	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.153846
10	133297139	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.105263
10	133301303	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.125
10	133410775	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.2
11	110434964	A->G	+	ENSG00000137714	FDX1	protein_coding	Intergenic	.	.	Alu	0.2
11	110435191	A->G	+	ENSG00000137714	FDX1	protein_coding	Intergenic	.	.	Alu	0.166667
11	117029268	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	117029410	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117038787	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117051711	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	117052020	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117052056	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117052097	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117053157	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	117053207	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117053225	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117053250	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	117053251	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.15
11	117053254	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117053744	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.157895
11	117053846	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	117068498	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	117073963	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.103448
11	117076908	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	117076911	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117077008	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117077040	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.35
11	117077056	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0833333
11	117077104	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117077152	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.357143
11	117084448	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117085734	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.384615
11	117085764	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.444444
11	117085768	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.315789
11	117085802	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	117085873	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117088737	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.228571
11	117088792	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.304348
11	117088801	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.157895
11	117094545	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0571429
11	117146199	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.363636
11	117147381	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.2
11	117158277	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.111111
11	117158305	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.133333
11	118577347	A->G	+	ENSG00000095139	ARCN1	protein_coding	Intergenic	.	.	Alu	0.25
11	118760405	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.4
11	118760427	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.333333
11	118762216	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.153846
11	118775880	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.2
11	122657956	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122670943	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122671010	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	122672465	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.133333
11	122672586	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.105263
11	122672587	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.157895
11	122672588	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.210526
11	126296756	A->G	+	ENSG00000150455	TIRAP	protein_coding	Intergenic	.	.	Alu	0.3
11	126346524	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.214286
11	126346906	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.25
11	128709093	A->G	+	ENSG00000151702	FLI1	protein_coding	Intergenic	.	.	Alu	0.454545
11	130072606	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.208333
11	130074277	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.142857
11	130097576	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.153846
11	130097586	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.2
11	130116929	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.363636
11	130116954	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.3
11	130116978	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.181818
11	130116980	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.416667
11	130116981	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.166667
12	100035744	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.181818
12	100094386	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.3
12	101805464	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.583333
12	101827884	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
12	101827891	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101827959	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.133333
12	101879261	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.0869565
12	101901622	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.0833333
12	101901624	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.32
12	101901631	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.142857
12	101901758	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
12	101903018	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.272727
12	101903019	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.181818
12	101911139	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.2
12	103934827	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.115385
12	103934884	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.16
12	103968102	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.157895
12	104464303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0666667
12	104492283	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.238095
12	104492303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.238095
12	104492822	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104492856	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104492867	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104492870	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104492913	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.6
12	104493885	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0540541
12	104541807	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.105263
12	104541808	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.105263
12	104616744	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104642668	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	107750328	A->G	-	ENSG00000110851	PRDM4	protein_coding	Intergenic	.	.	Alu	0.2
12	108632795	A->G	-	ENSG00000257221	AC007569.1	antisense	Intergenic	.	.	Alu	0.181818
12	108651054	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.181818
12	108688779	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.153846
12	108711275	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.363636
12	110000888	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.181818
12	110009964	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.2
12	110287868	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.176471
12	110292712	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.3
12	110313430	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.2
12	110439645	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.214286
12	110439670	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.4
12	110442127	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.428571
12	110442141	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.142857
12	110498253	A->G	-	ENSG00000111237	VPS29	protein_coding	Intergenic	.	.	Alu	0.25
12	110578895	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.272727
12	110579066	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.2
12	110580435	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.181818
12	110580971	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.3
12	110581025	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.2
12	110581149	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.2
12	110581222	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.214286
12	110581248	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.428571
12	110581251	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.1875
12	110581270	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.3
12	111431656	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	111431695	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.117647
12	111433637	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.166667
12	116089249	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116089269	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116089331	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116090928	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116155385	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0952381
12	116155390	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.263158
12	116155421	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.285714
12	116177996	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.333333
12	116218898	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.176471
12	116228455	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	116232904	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116232938	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.111111
12	116233040	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116234502	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116234503	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116234511	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116272551	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	118255360	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.105263
12	118320340	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118341798	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118352766	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118352955	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	118352983	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118354507	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.272727
12	118356810	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	120114165	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.2
12	121025582	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.181818
12	121025653	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.181818
12	121025654	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.272727
12	121025662	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.416667
12	121030017	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121030950	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.461538
12	121035270	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.142857
12	121035956	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.166667
12	121210620	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.047619
12	121210621	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0454545
12	121210699	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.129032
12	121210705	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0487805
12	121211283	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0625
12	121211306	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.125
12	121211345	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.05
12	121211368	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0555556
12	121211369	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0512821
12	121211441	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.116279
12	121211452	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0454545
12	121212316	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.136364
12	121212340	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.222222
12	121223151	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0952381
12	121287776	A->G	-	ENSG00000110931	CAMKK2	protein_coding	Intergenic	.	.	Alu	0.307692
12	121642694	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
12	122507255	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.157895
12	122507306	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.117647
12	122512079	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.166667
12	122512493	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.130435
12	122512574	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.571429
12	122513932	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.135135
12	122514022	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0540541
12	122514024	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.289474
12	122514338	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.363636
12	122515500	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.05
12	122869716	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.461538
12	123417852	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.2
12	123429689	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.4
12	123429747	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	123434184	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.117647
12	123434270	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	123434323	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	123435615	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.0689655
12	123435617	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.103448
12	123435627	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.111111
12	123435679	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	123435708	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.08
12	123435720	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	123460502	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.2
12	123460504	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.181818
12	123460510	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.181818
12	131728801	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.2
12	131728829	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.153846
12	131728963	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.5
12	131899456	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.4
12	131899603	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.166667
12	132826198	A->G	+	ENSG00000090615	GOLGA3	protein_coding	Intergenic	.	.	Alu	1
13	109619343	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
13	109691001	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
13	109691003	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
13	109691015	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
13	109691016	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
13	109773601	A->G	-	ENSG00000185950	IRS2	protein_coding	Intergenic	.	.	Alu	0.42
13	109775270	A->G	-	ENSG00000185950	IRS2	protein_coding	Intergenic	.	.	Alu	0.117647
13	110892295	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0833333
13	110895504	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.142857
13	113492721	A->G	+	ENSG00000150403	TMCO3	protein_coding	Intergenic	.	.	Alu	0.153846
13	113492733	A->G	+	ENSG00000150403	TMCO3	protein_coding	Intergenic	.	.	Alu	0.181818
14	100370937	A->G	-	ENSG00000140105	WARS	protein_coding	Intergenic	.	.	Alu	0.2
14	100370943	A->G	-	ENSG00000140105	WARS	protein_coding	Intergenic	.	.	Alu	0.166667
14	101817087	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.166667
14	101817138	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.166667
14	102345935	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.3
14	102781533	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.0769231
14	102782485	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.105263
14	102786433	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.117647
14	102786450	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102787991	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.133333
14	102787993	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.153846
14	102788001	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102788753	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	102797831	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.133333
14	102797842	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.142857
14	102800751	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	102801221	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102801558	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.153846
14	102804059	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.130435
14	102804587	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.136364
14	102804588	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.0952381
14	102804613	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.25
14	102816172	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	102820887	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	105501580	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
14	105501584	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
14	105501599	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
15	101221371	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.125
15	101229719	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.347826
15	101229741	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	101230119	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.277778
15	101230120	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.117647
15	101230121	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.277778
15	101234751	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.117647
15	101234780	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.130435
15	101234784	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.125
15	101234785	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.125
MT	1438	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
MT	750	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
MT	8348	A->G	+	ENSG00000210156	MT-TK	Mt_tRNA	Intron	.	.	Alu	1
X	2715433	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	1
X	2715566	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	1
X	71292799	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.2
X	71292854	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.2
X	73947034	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0350877
X	74280097	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.176471
Y	12688852	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.153846
Y	12688853	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.153846
Y	19588491	A->G	+	ENSG00000131002	TXLNGY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0625
Y	7328029	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
Y	7328050	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0666667
Y	7328067	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.047619
Y	7328244	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.105263
Y	7333038	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
1	505018	A->G	-	ENSG00000237094	AL732372.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
4	780286	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.0909091
4	780310	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.0465116
4	780327	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.108696
4	780350	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.09375
19	218876	A->G	-	ENSG00000282508	LINC01002	processed_transcript	Intron	.	.	Alu	0.107143
19	218884	A->G	-	ENSG00000282508	LINC01002	processed_transcript	Intron	.	.	Alu	0.097561
19	221166	A->G	-	ENSG00000282508	LINC01002	processed_transcript	Intron	.	.	Alu	0.636364
2	9936713	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.117647
3	9388126	A->G	-	ENSG00000206573	THUMPD3-AS1	antisense	Intron	.	.	Alu	0.03125
4	2853628	A->G	+	ENSG00000087274	ADD1	protein_coding	Intron	.	.	Alu	0.2
7	2238880	A->G	-	ENSG00000122687	MRM2	protein_coding	Intron	.	.	Alu	0.153846
12	6439525	A->G	-	ENSG00000215039	CD27-AS1	processed_transcript	Intron	.	.	Alu	0.3
12	6944199	A->G	+	ENSG00000111678	C12orf57	protein_coding	Intron	.	.	Alu	1
12	6952303	A->G	+	ENSG00000111679	PTPN6	protein_coding	Intron	.	.	Alu	1
12	6953228	A->G	+	ENSG00000111679	PTPN6	protein_coding	Intron	.	.	Alu	1
12	7111103	A->G	+	ENSG00000205885	C1RL-AS1	antisense	Intron	.	.	Alu	1
12	7923199	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.230769
12	7932951	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.44
12	9648777	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intron	.	.	Alu	0.543624
12	9659666	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.266667
12	9659679	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.333333
19	1458554	A->G	-	ENSG00000115266	APC2	protein_coding	Intron	.	.	Alu	0.3125
1	16642820	A->G	-	ENSG00000283773	AL137798.3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.333333
1	20649678	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.181818
1	20649682	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.2
1	23975231	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intron	.	.	Alu	1
1	28509341	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0447761
1	28509416	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.046875
1	31933156	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.166667
1	31933184	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.166667
1	31933671	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.25
1	31933697	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.142857
1	31933715	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.2
1	45655861	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.125
1	45655924	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.25
1	45655971	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.214286
1	45658764	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.25
1	45658766	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.333333
1	70249795	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intron	.	.	Alu	0.142857
1	70249812	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intron	.	.	Alu	0.153846
1	84578126	A->G	+	ENSG00000284882	AL359762.1	bidirectional_promoter_lncRNA	Intron	.	.	Alu	0.25
2	23968986	A->G	+	ENSG00000173960	UBXN2A	protein_coding	Intron	.	.	Alu	0.2
2	23968997	A->G	+	ENSG00000173960	UBXN2A	protein_coding	Intron	.	.	Alu	0.2
2	44356325	A->G	-	ENSG00000138078	PREPL	protein_coding	Intron	.	.	Alu	0.181818
2	61502536	A->G	-	ENSG00000082898	XPO1	protein_coding	Intron	.	.	Alu	0.2
2	95906674	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	Intron	.	.	Alu	0.1875
3	12589718	A->G	-	ENSG00000132155	RAF1	protein_coding	Intron	.	.	Alu	0.363636
3	12589928	A->G	-	ENSG00000132155	RAF1	protein_coding	Intron	.	.	Alu	0.333333
3	14944891	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0285714
3	14944982	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.025974
3	49373257	A->G	-	ENSG00000067560	RHOA	protein_coding	Intron	.	.	Alu	0.117647
3	49373322	A->G	-	ENSG00000067560	RHOA	protein_coding	Intron	.	.	Alu	0.235294
3	49373325	A->G	-	ENSG00000067560	RHOA	protein_coding	Intron	.	.	Alu	0.263158
4	98026084	A->G	+	ENSG00000242697	RPL5P12	processed_pseudogene	Intron	.	.	Alu	1
5	34175828	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0833333
5	44816481	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.15
5	70479065	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0740741
5	70479068	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
5	70479075	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.173913
5	70479080	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.238095
6	16615789	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intron	.	.	Alu	0.181818
6	29889346	A->G	+	ENSG00000206341	HLA-H	unprocessed_pseudogene	Intron	.	.	Alu	0.357143
6	30261457	A->G	+	ENSG00000270604	HCG17	lincRNA	Intron	.	.	Alu	0.877551
6	42940416	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0571429
6	42941528	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0645161
6	42941586	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.075
7	29401049	A->G	+	ENSG00000285162	AC004593.3	protein_coding	Intron	.	.	Alu	0.142857
7	48106411	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.2
7	48106428	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.181818
7	72829753	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.541667
7	72999529	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
7	73229611	A->G	+	ENSG00000182487	NCF1B	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.909091
7	75359299	A->G	+	ENSG00000278416	PMS2P2	unprocessed_pseudogene	Intron	.	.	Alu	1
7	84939766	A->G	-	ENSG00000280325	AC074183.2	TEC	Intron	.	.	Alu	1
7	87187338	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.214286
7	87187347	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.333333
7	87187352	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.636364
8	55893893	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.0769231
8	55893924	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.0625
8	55895589	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.12
9	19125558	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intron	.	.	Alu	0.120482
9	19125674	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intron	.	.	Alu	0.052381
9	19125686	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intron	.	.	Alu	0.03207
9	34201476	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.727273
9	40992722	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.145455
9	40993414	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0704225
9	40993428	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0540541
9	41008967	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.385714
9	41011651	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.149254
9	62809968	A->G	+	ENSG00000238113	LINC01410	lincRNA	Intron	.	.	Alu	0.642857
9	72335470	A->G	+	ENSG00000225434	LINC01504	lincRNA	Intron	.	.	Alu	0.181818
9	72335471	A->G	+	ENSG00000225434	LINC01504	lincRNA	Intron	.	.	Alu	0.166667
9	96902983	A->G	-	ENSG00000196312	MFSD14C	protein_coding	Intron	.	.	Alu	0.3
10	42614292	A->G	-	ENSG00000196693	ZNF33B	protein_coding	Intron	.	.	Alu	0.272727
10	43421979	A->G	+	ENSG00000230555	AL450326.1	lincRNA	Intron	.	.	Alu	0.153846
10	69098709	A->G	+	ENSG00000274008	RF00017	misc_RNA	Intron	.	.	Alu	0.0833333
10	79349922	A->G	+	ENSG00000108179	PPIF	protein_coding	Intron	.	.	Alu	0.0517241
11	16756339	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.545455
11	16756344	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.181818
11	16756363	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.166667
11	45861639	A->G	+	ENSG00000121671	CRY2	protein_coding	Intron	.	.	Alu	0.153846
11	60389060	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intron	.	.	Alu	0.242424
11	65441344	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0276243
11	65442619	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.265116
11	65442627	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0502283
11	65442670	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0442478
11	65442684	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0214592
11	65442701	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0688073
11	65442703	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0495495
11	93733708	A->G	-	ENSG00000284458	MIR1304	miRNA	Intron	.	.	Alu	0.6
12	45755986	A->G	+	ENSG00000189079	ARID2	protein_coding	Intron	.	.	Alu	0.166667
12	53296676	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.142857
12	53297151	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.2
12	68649117	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.166667
12	68649184	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.0645161
12	68649210	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.0588235
12	68649929	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.105263
12	68649993	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.130435
12	69255041	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intron	.	.	Alu	0.5
12	98454031	A->G	-	ENSG00000227825	SLC9A7P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.153846
12	98454052	A->G	-	ENSG00000227825	SLC9A7P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.181818
13	32524825	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.272727
13	32524847	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.285714
13	32524860	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.461538
13	32524891	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.5
13	32524942	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.142857
13	32525553	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.153846
13	32525556	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.181818
13	32525569	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.333333
13	40810767	A->G	+	ENSG00000207652	MIR621	miRNA	Intron	.	.	Alu	0.2
13	40912631	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
13	40912633	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.181818
14	58267138	A->G	-	ENSG00000258682	AL132989.1	sense_overlapping	Intron	.	.	Alu	0.0714286
14	58293823	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0555556
14	58293876	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0909091
14	58293880	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0909091
14	58293896	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.075
14	58293915	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0425532
14	58293922	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0377358
14	58294014	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.09375
14	58294015	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.1875
14	58295723	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0408163
14	58295741	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.04
14	73916749	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intron	.	.	Alu	0.384615
14	90766955	A->G	+	ENSG00000213315	AL122020.1	processed_pseudogene	Intron	.	.	Alu	1
14	91288740	A->G	-	ENSG00000015133	CCDC88C	protein_coding	Intron	.	.	Alu	0.2
15	22672802	A->G	+	ENSG00000276141	WHAMMP3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	1
15	30484647	A->G	+	ENSG00000215302	AC127502.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.5
15	30488286	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.333333
15	30488295	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.133333
15	30489324	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.12
15	41298841	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0263158
15	41298989	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0517241
15	41301151	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0350877
15	41302263	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.115385
15	41302415	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0235294
15	41302451	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0232558
15	41305357	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0689655
15	51567211	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.333333
15	51567212	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.153846
15	51567307	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.5
15	51567917	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.333333
15	51567974	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.315789
15	51567975	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.263158
15	51567982	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.263158
15	51567988	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.117647
15	64470322	A->G	+	ENSG00000259682	AC091231.1	sense_intronic	Intron	.	.	Alu	0.2
15	74027467	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.166667
15	74466044	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.176471
15	78890672	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.277778
15	78890743	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.047619
15	78890762	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.0714286
16	21810814	A->G	-	ENSG00000248124	RRN3P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.357143
16	29834400	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.421053
16	29834402	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.368421
16	31122518	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.566667
16	31122598	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.5
16	31182817	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.0645161
16	70234177	A->G	-	ENSG00000261556	SMG1P7	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
16	71750450	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intron	.	.	Alu	0.142857
17	29403768	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intron	.	.	Alu	0.117647
17	30635256	A->G	+	ENSG00000250462	LRRC37BP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.117647
17	30965087	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intron	.	.	Alu	0.125
17	30965094	A->G	+	ENSG00000265743	AC138207.5	lincRNA	Intron	.	.	Alu	0.111111
17	43360062	A->G	-	ENSG00000279602	AC109326.1	TEC	Intron	.	.	Alu	0.193548
17	43360345	A->G	-	ENSG00000279602	AC109326.1	TEC	Intron	.	.	Alu	0.333333
17	44176281	A->G	-	ENSG00000267080	ASB16-AS1	antisense	Intron	.	.	Alu	0.0952381
17	46156830	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.214286
17	46156842	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.692308
17	46156847	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.714286
17	47673795	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intron	.	.	Alu	0.5
17	47673804	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intron	.	.	Alu	0.384615
17	51031209	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intron	.	.	Alu	0.0869565
17	58476736	A->G	-	ENSG00000266648	SETP3	processed_pseudogene	Intron	.	.	Alu	1
17	59202748	A->G	+	ENSG00000265415	AC099850.3	antisense	Intron	.	.	Alu	0.0869565
17	59202767	A->G	+	ENSG00000265415	AC099850.3	antisense	Intron	.	.	Alu	0.0746269
17	59202875	A->G	+	ENSG00000265415	AC099850.3	antisense	Intron	.	.	Alu	0.030303
17	68115091	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
17	81879787	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.25
17	81880205	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.166667
17	82265338	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.133333
17	82265378	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.1
18	26689247	A->G	-	ENSG00000265369	PCAT18	lincRNA	Intron	.	.	Alu	0.272727
18	46216843	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intron	.	.	Alu	0.625
18	57641759	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.0769231
19	12943230	A->G	+	ENSG00000179218	CALR	protein_coding	Intron	.	.	Alu	0.105263
19	13836464	A->G	-	ENSG00000207808	MIR27A	miRNA	Intron	.	.	Alu	0.0681818
19	13836514	A->G	-	ENSG00000207808	MIR27A	miRNA	Intron	.	.	Alu	0.0909091
19	38349218	A->G	+	ENSG00000099338	CATSPERG	protein_coding	Intron	.	.	Alu	0.166667
19	38349232	A->G	+	ENSG00000099338	CATSPERG	protein_coding	Intron	.	.	Alu	0.166667
19	38349244	A->G	+	ENSG00000099338	CATSPERG	protein_coding	Intron	.	.	Alu	0.642857
19	48256603	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0465116
19	48257739	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.24
19	53211318	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.222222
19	53214335	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.3
19	57853856	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intron	.	.	Alu	0.107143
19	57853889	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intron	.	.	Alu	0.105263
19	58584166	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.107143
20	36934718	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.172414
20	36934730	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.185185
20	36934751	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.115385
20	36934797	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.136364
20	36934803	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.538462
20	36934819	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0869565
20	36934823	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0869565
20	36934831	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0769231
20	36934833	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0714286
20	36934871	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0666667
20	36934885	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0882353
20	36934890	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.0571429
20	36934933	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.242424
20	36934937	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.233333
20	36946504	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.333333
20	63571516	A->G	-	ENSG00000130589	HELZ2	protein_coding	Intron	.	.	Alu	0.444444
22	28801019	A->G	+	ENSG00000226471	Z93930.2	antisense	Intron	.	.	Alu	0.0289855
22	38953407	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intron	.	.	Alu	0.111111
1	121571348	A->G	+	ENSG00000231752	EMBP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.84
1	151073154	A->G	+	ENSG00000143458	GABPB2	protein_coding	Intron	.	.	Alu	0.4
1	153633061	A->G	-	ENSG00000271853	AL162258.1	processed_transcript	Intron	.	.	Alu	0.142857
1	179869115	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.133333
1	179869117	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.214286
1	179874757	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.25
1	207768998	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.272727
2	138500843	A->G	-	ENSG00000228043	AC114763.1	lincRNA	Intron	.	.	Alu	0.181818
2	152694100	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intron	.	.	Alu	0.0588235
2	196153071	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.111111
2	196153074	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.0833333
2	196154182	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.166667
2	197496904	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intron	.	.	Alu	0.105263
2	197496908	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intron	.	.	Alu	0.222222
2	197496910	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intron	.	.	Alu	0.5
2	218235276	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.214286
2	218235279	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.133333
2	218235293	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.333333
2	218235426	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.190476
2	218235856	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.272727
2	218235861	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.272727
2	218256502	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.181818
2	218256552	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.307692
2	218256605	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.181818
3	160412660	A->G	+	ENSG00000248710	AC079594.2	protein_coding	Intron	.	.	Alu	0.0714286
3	172337926	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intron	.	.	Alu	0.307692
3	183452121	A->G	+	ENSG00000240024	LINC00888	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0952381
3	183452151	A->G	+	ENSG00000240024	LINC00888	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.105263
3	195963345	A->G	-	ENSG00000185485	SDHAP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.363636
3	196400657	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.230769
3	196400671	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.153846
3	196400672	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.153846
3	196400714	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.142857
3	197954434	A->G	+	ENSG00000182899	RPL35A	protein_coding	Intron	.	.	Alu	0.153846
4	102811230	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.136364
4	102811494	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.214286
4	102811619	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0512821
4	102811668	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.111111
4	102812171	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.1875
4	102812272	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0434783
4	151103269	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.35
4	151103371	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0833333
5	115838956	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.277778
5	127956829	A->G	-	ENSG00000245937	LINC01184	lincRNA	Intron	.	.	Alu	0.142857
5	127956862	A->G	-	ENSG00000245937	LINC01184	lincRNA	Intron	.	.	Alu	0.153846
5	140575802	A->G	-	ENSG00000283155	AC116353.4	processed_transcript	Intron	.	.	Alu	0.117647
5	140575829	A->G	-	ENSG00000283155	AC116353.4	processed_transcript	Intron	.	.	Alu	0.0363636
5	140575862	A->G	-	ENSG00000283155	AC116353.4	processed_transcript	Intron	.	.	Alu	0.0714286
5	150406017	A->G	-	ENSG00000019582	CD74	protein_coding	Intron	.	.	Alu	0.0652174
5	180835080	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.782609
5	180835083	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.24
5	180835317	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.119048
5	180835372	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.694444
5	180835373	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.722222
5	180835380	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.230769
5	180835420	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.133333
5	181313887	A->G	+	ENSG00000238035	AC138035.1	lincRNA	Intron	.	.	Alu	0.6
6	132753901	A->G	-	ENSG00000234484	AL032821.1	antisense	Intron	.	.	Alu	0.129032
6	132753914	A->G	-	ENSG00000234484	AL032821.1	antisense	Intron	.	.	Alu	0.0689655
7	100351254	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0425532
7	100856589	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.578947
7	100856595	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.304348
7	100856632	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.117647
7	100856726	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.454545
7	100856732	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.7
7	100856751	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.2
7	130944865	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.24
7	130944867	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.18
7	130945233	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.0612245
7	130945478	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.448276
7	130959922	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.0384615
7	130959940	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.0681818
7	143298539	A->G	+	ENSG00000240322	RN7SL481P	misc_RNA	Intron	.	.	Alu	0.363636
7	143298587	A->G	+	ENSG00000240322	RN7SL481P	misc_RNA	Intron	.	.	Alu	0.3
8	144974956	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0869565
9	113151883	A->G	+	ENSG00000136867	SLC31A2	protein_coding	Intron	.	.	Alu	0.0666667
9	129347275	A->G	+	ENSG00000233901	LINC01503	lincRNA	Intron	.	.	Alu	0.0952381
9	129347303	A->G	+	ENSG00000233901	LINC01503	lincRNA	Intron	.	.	Alu	0.0952381
9	129503384	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.130435
9	129504475	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0882353
9	129505994	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0769231
9	129506776	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0882353
10	103169429	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intron	.	.	Alu	0.307692
10	112449592	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0714286
10	119105381	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intron	.	.	Alu	0.230769
10	133295281	A->G	-	ENSG00000235245	AL360181.2	antisense	Intron	.	.	Alu	0.333333
10	133301879	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intron	.	.	Alu	0.2
11	130004227	A->G	+	ENSG00000233220	LINC00167	lincRNA	Intron	.	.	Alu	0.142857
12	100033599	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.2
12	100033669	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.2
12	121213337	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0909091
12	121213562	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.315789
12	121213563	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.333333
12	121213564	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.210526
12	121213582	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.153846
12	121213622	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.178571
12	121213628	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.166667
12	121213629	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.107143
12	121213667	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0555556
12	121213675	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0588235
12	121213770	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0909091
12	121213795	A->G	-	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.4
12	121213796	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.1
12	121213800	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0714286
12	121213931	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.151515
12	121213945	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0555556
12	121213972	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.102564
12	121213994	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0740741
12	121214055	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.6
12	121214065	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.166667
12	121215537	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.181818
12	121215774	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0465116
12	121223259	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.230769
12	122507181	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.916667
12	122507231	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.0952381
12	122508031	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.125
12	123459035	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.230769
12	123459036	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.153846
12	123459039	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.153846
12	133040452	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intron	.	.	Alu	0.2
13	102607865	A->G	+	ENSG00000134900	TPP2	protein_coding	Intron	.	.	Alu	0.0540541
14	102348116	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.4
14	103694925	A->G	+	ENSG00000269910	AL049840.2	antisense	Intron	.	.	Alu	0.3
X	101010246	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	110174105	A->G	+	ENSG00000157600	TMEM164	protein_coding	three_prime_utr	.	.	Alu	0.0597015
X	118686041	A->G	+	ENSG00000147251	DOCK11	protein_coding	three_prime_utr	.	.	Alu	0.0727273
X	118686044	A->G	+	ENSG00000147251	DOCK11	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	119453552	A->G	+	ENSG00000077713	SLC25A43	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	119539448	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.4
X	119539449	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.4
X	123909055	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.2
X	123909068	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123909128	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	123909129	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.357143
X	123909265	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	123909292	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.352941
X	123913042	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123913055	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	12922711	A->G	+	ENSG00000101916	TLR8	protein_coding	three_prime_utr	.	.	Alu	0.05
X	1310013	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.357143
X	1310044	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.2
X	1310045	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.2
X	1310048	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	1310074	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	135963678	A->G	-	ENSG00000169446	MMGT1	protein_coding	three_prime_utr	.	.	Alu	0.0983607
X	153948100	A->G	-	ENSG00000172534	HCFC1	protein_coding	three_prime_utr	.	.	Alu	0.104167
X	15782972	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.714286
X	15786127	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.0909091
X	15786128	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.2
X	16763063	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	16763078	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	16763086	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.5
X	16763106	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	16763124	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	16763152	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.928571
X	16763552	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16763564	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	1
X	16763575	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.416667
X	16763616	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	16763617	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	16763635	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	16764743	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	16764795	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	16764905	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	2487001	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	1
X	2906214	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	2906262	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.05
X	2906340	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	2906423	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	2907073	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	2907084	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0882353
X	302007	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	1
X	48578508	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	54560794	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	71465008	A->G	+	ENSG00000147133	TAF1	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	71465202	A->G	+	ENSG00000147133	TAF1	protein_coding	three_prime_utr	.	.	Alu	0.254902
X	77827713	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0314961
X	77828200	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
X	77828348	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.029703
X	77828563	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.057377
X	78129038	A->G	+	ENSG00000102144	PGK1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	85088843	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.5
X	85091007	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.2
6	349171	A->G	+	ENSG00000112679	DUSP22	protein_coding	three_prime_utr	.	.	Alu	0.8
17	516077	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.1
17	518647	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.2
19	863481	A->G	+	ENSG00000197766	CFD	protein_coding	three_prime_utr	.	.	Alu	0.0327869
19	863495	A->G	+	ENSG00000197766	CFD	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	863559	A->G	+	ENSG00000197766	CFD	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	1635543	A->G	-	ENSG00000248333	CDK11B	protein_coding	three_prime_utr	.	.	Alu	1
1	1663640	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0566038
1	1664061	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	1664083	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	1664088	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	1664136	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.137931
1	1664139	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	3780493	A->G	-	ENSG00000130764	LRRC47	protein_coding	three_prime_utr	.	.	Alu	0.18018
1	6222435	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	6222527	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.288889
1	6522101	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.121212
1	6522116	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	6522178	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	6522976	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	6522995	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	6523078	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	6523156	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.173913
1	6523354	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	6523467	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	6523478	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	6523522	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	6523533	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	6523541	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.2
1	6525168	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	9036401	A->G	-	ENSG00000142583	SLC2A5	protein_coding	three_prime_utr	.	.	Alu	0.4
1	9265746	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	9267094	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.056338
1	9268218	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	9270198	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	9271119	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	9583066	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	9929172	A->G	-	ENSG00000162441	LZIC	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	9929562	A->G	-	ENSG00000162441	LZIC	protein_coding	three_prime_utr	.	.	Alu	0.216216
1	9982853	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9982879	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	9983300	A->G	+	ENSG00000241326	AL603962.1	sense_intronic	three_prime_utr	.	.	Alu	0.181818
4	1389449	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.2
4	2835656	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	2839661	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.285714
4	2839669	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	2839825	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.6
4	2839840	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.5
4	2840002	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	3020587	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	3021083	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	3021086	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	3021158	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.2
6	3021160	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.3
6	3021186	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	3021231	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	3021232	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	3021875	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	3021947	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	3021950	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	3022173	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	3022212	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	3022224	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.264706
6	3022234	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	3022298	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	3022300	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.178571
6	3022310	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.2
6	3022372	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.047619
6	3022396	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.205128
6	3022400	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.102564
6	3022464	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.185185
6	3022474	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	3022491	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.2
6	3022492	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
6	3022526	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	7283147	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.111111
6	7283217	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.0833333
6	7283345	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.142857
6	7286789	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.133333
6	7286829	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.1
6	7286830	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.157895
6	8014376	A->G	-	ENSG00000188428	BLOC1S5	protein_coding	three_prime_utr	.	.	Alu	0.0526316
6	8014412	A->G	-	ENSG00000188428	BLOC1S5	protein_coding	three_prime_utr	.	.	Alu	0.0454545
7	4769688	A->G	+	ENSG00000164916	FOXK1	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	4769693	A->G	+	ENSG00000164916	FOXK1	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	1782392	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	6643358	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.5
8	6643448	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	6643587	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.545455
12	7095183	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	8053571	A->G	+	ENSG00000065970	FOXJ2	protein_coding	three_prime_utr	.	.	Alu	0.521739
12	9696287	A->G	+	ENSG00000069493	CLEC2D	protein_coding	three_prime_utr	.	.	Alu	0.6
12	9752880	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	0.996528
12	9753471	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	1
16	3242106	A->G	-	ENSG00000103313	MEFV	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	9104243	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0210526
16	9106147	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0217391
16	9111028	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.026087
17	1570052	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.08
17	1572914	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	1572928	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.322581
17	1572952	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	1573000	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	1573051	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.4
17	1573081	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.444444
17	1573093	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	1573628	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	1573653	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	1573893	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	3609135	A->G	-	ENSG00000196689	TRPV1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	5025073	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.416667
17	5025109	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.125
17	5025121	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	5025135	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	5209337	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	8227030	A->G	-	ENSG00000178971	CTC1	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	1799057	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	1799060	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	1799266	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	1799352	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	1799521	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.125
19	2071945	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.025
19	2072006	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.0289855
19	2072015	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.0229885
19	2072737	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.0357143
19	3466309	A->G	+	ENSG00000141905	NFIC	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	4654577	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	7084447	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	7084454	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	7084480	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7084492	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.125
19	7084542	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7084567	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7084618	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	7084627	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	7084633	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.2
19	7085399	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	7085407	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	7085427	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	7086043	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.2
19	7086078	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	8540447	A->G	-	ENSG00000142347	MYO1F	protein_coding	three_prime_utr	.	.	Alu	0.26087
19	8540453	A->G	-	ENSG00000142347	MYO1F	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	9561789	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	9562329	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	9562795	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	9562834	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	9562996	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.538462
19	9563662	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.15
19	9564304	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.1
19	9650792	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	1474865	A->G	-	ENSG00000196209	SIRPB2	protein_coding	three_prime_utr	.	.	Alu	0.0277778
20	3108825	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.2
20	3108833	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.166667
20	3108838	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.181818
20	3108850	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.454545
20	3108851	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.181818
20	3824747	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3869051	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3869052	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3869067	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3869552	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3869961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3872418	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3873529	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3929024	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
20	3929050	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
20	3929071	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
20	3929111	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
20	3929114	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
20	5194893	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.545455
1	10458044	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	10458213	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.254902
1	10458968	A->G	-	ENSG00000203469	AL354956.1	antisense	three_prime_utr	.	.	Alu	0.1
1	10459895	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10460397	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	10462499	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	19217414	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.2
1	19217508	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.2
1	19258972	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.102564
1	19260003	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	20744174	A->G	-	ENSG00000127483	HP1BP3	protein_coding	three_prime_utr	.	.	Alu	0.486056
1	23961914	A->G	+	ENSG00000189266	PNRC2	protein_coding	three_prime_utr	.	.	Alu	0.530612
1	23966364	A->G	-	ENSG00000188529	SRSF10	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	24538698	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.25
1	24538821	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.142857
1	24538843	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.388889
1	24538879	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.133333
1	24538897	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.133333
1	25817467	A->G	+	ENSG00000228172	AL020996.1	antisense	three_prime_utr	.	.	Alu	0.0208333
1	26878733	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	28335145	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.5
1	28498827	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	32632246	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	36057722	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	36061948	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	36063818	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	36064265	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36067455	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	36068387	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.25
1	36068423	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	36069313	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	36069892	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	37861824	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	45509674	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	52409490	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	52409491	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	52823216	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	52823222	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	52823225	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	52823876	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0731707
1	52824039	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	52824188	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	52824280	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.08
1	52824292	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	52824518	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.4
1	52824545	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	52824627	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	52825335	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	54030492	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.08
1	54030539	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.125
1	54031018	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.2
1	54031151	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	54031168	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	65435472	A->G	+	ENSG00000213625	LEPROT	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	66985398	A->G	+	ENSG00000198160	MIER1	protein_coding	three_prime_utr	.	.	Alu	0.0813953
1	66985399	A->G	+	ENSG00000198160	MIER1	protein_coding	three_prime_utr	.	.	Alu	0.146341
1	71064917	A->G	-	ENSG00000235079	ZRANB2-AS1	antisense	three_prime_utr	.	.	Alu	0.05
1	90032209	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	92511286	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	20251058	A->G	-	ENSG00000055917	PUM2	protein_coding	three_prime_utr	.	.	Alu	0.296296
2	20618504	A->G	-	ENSG00000118960	HS1BP3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	24000380	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	24000427	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	24000431	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	24002697	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32309223	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	32309326	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.857143
2	32310218	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	37100446	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.27027
2	37100447	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.243243
2	37100470	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37100559	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.8
2	37100732	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0576923
2	37100857	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.16129
2	37100865	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.258065
2	37100870	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.413793
2	37100873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37100899	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.15
2	37100932	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.565217
2	37100939	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.6
2	37100944	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.55
2	37100954	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.444444
2	37100986	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.138889
2	37100989	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.184211
2	37101248	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	37101258	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.114286
2	37101403	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0930233
2	37101530	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37101540	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	37101621	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.123288
2	37101657	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.126984
2	37102020	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	37102177	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	37102240	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37102241	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37103982	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37104126	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37104134	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	37104138	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37104452	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37104588	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.04
2	37104628	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0566038
2	37104750	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0731707
2	37104786	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.473684
2	37104790	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.318182
2	37104873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37104881	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	37104888	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.108108
2	37202480	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37202483	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.318182
2	37202484	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.434783
2	37202485	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	37202492	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37204452	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	38068993	A->G	-	ENSG00000138061	CYP1B1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	55635380	A->G	-	ENSG00000138035	PNPT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	68180526	A->G	-	ENSG00000273275	AC017083.2	antisense	three_prime_utr	.	.	Alu	0.0537634
2	69461622	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.368421
2	69461623	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	69461647	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	69461663	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	69461720	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	69461769	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	69461770	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	69461771	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	69461795	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	69461819	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	69461859	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	69461865	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	69462567	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	69462579	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	69462593	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	69462619	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	69462638	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	69462730	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	69463636	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	69463676	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	69463716	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	69463790	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	85548718	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	85549634	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.25
2	85549642	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.2
2	96249368	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.25
2	96249500	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.155172
2	96249514	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0980392
2	96249537	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	96249575	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.20339
2	96249578	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0327869
2	99195898	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.05
2	99196514	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.04
2	99196566	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	99196567	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	10150914	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.09375
3	10150949	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0857143
3	10151114	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	10151986	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0224719
3	15072150	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	23921708	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	23921716	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	23921784	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	23922083	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	23922838	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	23923013	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.3
3	33143149	A->G	+	ENSG00000170275	CRTAP	protein_coding	three_prime_utr	.	.	Alu	0.642857
3	33811137	A->G	+	ENSG00000170248	PDCD6IP	protein_coding	three_prime_utr	.	.	Alu	0.2
3	40537506	A->G	+	ENSG00000172888	ZNF621	protein_coding	three_prime_utr	.	.	Alu	0.5625
3	44749221	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	44749356	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.3
3	44749570	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	44749965	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749988	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	46375779	A->G	+	ENSG00000160791	CCR5	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	46375781	A->G	+	ENSG00000160791	CCR5	protein_coding	three_prime_utr	.	.	Alu	0.4
3	48748423	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.08
3	48749681	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.115385
3	48749928	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	48750055	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	48750105	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	48750196	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	48751183	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.25
3	49359890	A->G	-	ENSG00000067560	RHOA	protein_coding	three_prime_utr	.	.	Alu	0.324518
3	49415363	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0408163
3	49415369	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0425532
3	49415396	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0576923
3	57272861	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
3	57563273	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	57626663	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	58318583	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	70957180	A->G	-	ENSG00000114861	FOXP1	protein_coding	three_prime_utr	.	.	Alu	0.457831
4	15849226	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.137931
4	15850029	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.031746
4	15850045	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.03125
4	17626690	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17801914	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.733333
4	17801930	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	39548437	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.105263
4	39549137	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.222222
4	39549157	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.166667
4	39549192	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.416667
4	39549411	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.421053
4	39549450	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0769231
4	39549467	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.176471
4	39550977	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.105263
4	39551073	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0833333
4	39551104	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0909091
4	39551114	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.1
4	39551183	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.181818
4	39551192	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.214286
4	56460828	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0363636
4	73056999	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	73057270	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.107143
4	73057393	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	73057675	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.08
4	73057767	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.1
4	77718349	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0519481
4	77718351	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0519481
4	77719085	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.129032
4	81455432	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	three_prime_utr	.	.	Alu	0.025974
4	82927577	A->G	-	ENSG00000189308	LIN54	protein_coding	three_prime_utr	.	.	Alu	0.285714
4	83293485	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.3125
4	83294091	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.318182
4	83294104	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	83294106	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	83294126	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.25
4	83294134	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	83294308	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.416667
4	83294326	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.615385
4	83294334	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	83294335	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	83294351	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	83294367	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.3
4	83294644	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	83294676	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	83294698	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.304348
4	83294727	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	83294820	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.5
4	83294876	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.428571
4	83294884	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.5
4	83294901	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	83294914	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.545455
5	10279637	A->G	-	ENSG00000164237	CMBL	protein_coding	three_prime_utr	.	.	Alu	0.2
5	32227700	A->G	-	ENSG00000150712	MTMR12	protein_coding	three_prime_utr	.	.	Alu	0.129032
5	32229470	A->G	-	ENSG00000150712	MTMR12	protein_coding	three_prime_utr	.	.	Alu	0.09375
5	34955591	A->G	+	ENSG00000168724	DNAJC21	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	37290377	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.125
5	37290788	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	37290871	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	37290882	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.2
5	37291318	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65667723	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	65668353	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	65668365	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65668392	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.171429
5	65668418	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	65668444	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	65668499	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	65668558	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.1
5	65668561	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	65668575	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	65668613	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	65668617	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65668796	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	65668799	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	65668800	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	65668851	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	65668875	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.538462
5	65668891	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.833333
5	69280894	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	69280981	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.0606061
5	75379096	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	75379097	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	75379143	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.8
5	79685800	A->G	+	ENSG00000164329	TENT2	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	82254307	A->G	+	ENSG00000152348	ATG10	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	96774840	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.365385
6	12037976	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
6	12037977	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	13288416	A->G	+	ENSG00000215022	AL008729.1	antisense	three_prime_utr	.	.	Alu	1
6	18130067	A->G	-	ENSG00000137364	TPMT	protein_coding	three_prime_utr	.	.	Alu	0.0344828
6	25984650	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	25988633	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	25988635	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	34588966	A->G	-	ENSG00000196821	C6orf106	protein_coding	three_prime_utr	.	.	Alu	0.0725806
6	34589009	A->G	-	ENSG00000196821	C6orf106	protein_coding	three_prime_utr	.	.	Alu	0.0705882
6	36490416	A->G	+	ENSG00000112078	KCTD20	protein_coding	three_prime_utr	.	.	Alu	0.0322581
6	36495068	A->G	-	ENSG00000112079	STK38	protein_coding	three_prime_utr	.	.	Alu	0.0898876
6	36605367	A->G	+	ENSG00000112081	SRSF3	protein_coding	three_prime_utr	.	.	Alu	0.2
6	37028646	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.384615
6	37028726	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.03
6	37028734	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.025974
6	37028735	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
6	37028844	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0397351
6	42077807	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	42077825	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.15
6	42077857	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0857143
6	42077939	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	42077956	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42077965	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	42078018	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42078151	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	42078152	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	42078164	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	42079586	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.116279
6	42079788	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.151515
6	42079789	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.151515
6	42079816	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0555556
6	42079828	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0425532
6	42080429	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	42080502	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.137931
6	42080550	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	42207448	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.037037
6	42886883	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42887363	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0273973
6	42887387	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
6	42888592	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.347222
6	44450064	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	44450073	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.2
6	70589355	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.2
6	73424178	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	73424191	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.25
6	73424267	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	73424270	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.1
6	73424371	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	73424992	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0454545
6	73425032	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
6	73425057	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	73425058	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.125
6	73425146	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	73516437	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0298507
6	73516460	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.03
6	73516585	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.020202
6	89634589	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	89636795	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.05
6	89636940	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
6	89636970	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	98873694	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	17344674	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0241935
7	17344710	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0325581
7	17344804	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0245098
7	17344829	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0642857
7	17344850	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0212766
7	17344858	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.03125
7	17344889	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.04375
7	17344905	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0361446
7	17345053	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	17345070	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.02
7	17345110	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0205479
7	25120289	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	25120313	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.266667
7	25121116	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.4
7	25121421	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	25121730	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	38723637	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.2
7	38724696	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.266667
7	38724838	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.137931
7	44801788	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.169355
7	44801789	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.275
7	44801809	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0480769
7	44801836	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0530973
7	44801871	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0425532
7	44802266	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	44802358	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.025974
7	44802500	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.477876
7	44829409	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0289855
7	48103958	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	48103965	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	66153174	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	66153205	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0240964
7	66153260	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	66153289	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.06
7	66153388	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	66153559	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.233333
7	66153603	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	66153604	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	66154064	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.037037
7	66154293	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0333333
7	74231772	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.05
7	90385869	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	90385872	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	90385880	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	99493359	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.05
7	99493427	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.0208333
7	99493439	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	99493452	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.03125
8	11842713	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0238095
8	11842717	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.025641
8	11842785	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0307692
8	11843025	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0967742
8	11843060	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.037037
8	11843077	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.228261
8	11843126	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0243902
8	11843142	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.028169
8	11843851	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	11843897	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0540541
8	11843900	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0384615
8	11843954	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.028169
8	11844025	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0212766
8	16107961	A->G	-	ENSG00000038945	MSR1	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	30678482	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0225564
8	30678489	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.024
8	30679087	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0357143
8	30679123	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0238095
8	30679142	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.121212
8	37756058	A->G	+	ENSG00000147475	ERLIN2	protein_coding	three_prime_utr	.	.	Alu	0.0227273
8	38970542	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.020202
8	38970564	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0294118
8	38970652	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0337079
8	38970678	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0238095
8	38971717	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.037037
8	38971896	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.031746
8	38972210	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.107692
8	38972291	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.025641
8	38972949	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0327869
8	38972955	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0555556
8	38972969	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0677966
8	38973065	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0338983
8	43020567	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43020620	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020823	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.08
8	43020851	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43020923	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43021408	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	43021512	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43021868	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43021876	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.714286
8	43021912	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	43021921	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.15
8	43023658	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43023723	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	43027009	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	43027144	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43028273	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	43028274	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	43029172	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.05
8	43029192	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	43029249	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
8	43029316	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
8	43029330	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	51817881	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	0.516129
8	51818304	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	1
8	56012468	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.3
8	56012660	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.3
8	56012705	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	56013531	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	56013532	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	56013533	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.642857
8	56013545	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	56013548	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	97726855	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0512821
8	97727003	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0416667
8	97727389	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0204082
8	97728648	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0289855
9	33043735	A->G	-	ENSG00000122692	SMU1	protein_coding	three_prime_utr	.	.	Alu	0.285714
9	36216029	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.285714
9	36216030	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	36216944	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.2
9	37503480	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0454545
9	37503582	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0384615
9	69717400	A->G	-	ENSG00000188647	PTAR1	protein_coding	three_prime_utr	.	.	Alu	0.545455
9	71972982	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	71972985	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	83245786	A->G	-	ENSG00000172159	FRMD3	protein_coding	three_prime_utr	.	.	Alu	0.384615
9	83245787	A->G	-	ENSG00000172159	FRMD3	protein_coding	three_prime_utr	.	.	Alu	0.178571
9	83246394	A->G	-	ENSG00000172159	FRMD3	protein_coding	three_prime_utr	.	.	Alu	0.818182
9	83898918	A->G	-	ENSG00000165115	KIF27	protein_coding	three_prime_utr	.	.	Alu	1
9	96894970	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	96894999	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	96895003	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	96902985	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.3
9	96903076	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.214286
10	16591036	A->G	-	ENSG00000148484	RSU1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	20284284	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.2
10	20284286	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.318182
10	20284468	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.21875
10	20284492	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.234043
10	20284509	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0933333
10	20284521	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.185185
10	20284534	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0263158
10	20284544	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.047619
10	20284568	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.240506
10	20284569	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0253165
10	20284927	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.05
10	20286804	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
10	20286924	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0727273
10	20286986	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.047619
10	68479549	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.117647
10	68479561	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.384615
10	68479562	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	71365079	A->G	+	ENSG00000279406	AL359183.1	TEC	three_prime_utr	.	.	Alu	0.153846
10	71365082	A->G	+	ENSG00000279406	AL359183.1	TEC	three_prime_utr	.	.	Alu	0.307692
10	72234347	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	72234412	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0517241
10	72235024	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	72235432	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0526316
10	72235435	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0526316
10	73249848	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0338983
10	73250038	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.025641
10	73250133	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0454545
10	73250286	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.037037
10	80522233	A->G	+	ENSG00000108219	TSPAN14	protein_coding	three_prime_utr	.	.	Alu	0.0810811
10	96958116	A->G	+	ENSG00000196233	LCOR	protein_coding	three_prime_utr	.	.	Alu	0.125
11	18530593	A->G	-	ENSG00000151116	UEVLD	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	32857245	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.08
11	32857252	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	36487058	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.307692
11	36487083	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.2
11	46678960	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	0.0677966
11	61366733	A->G	+	ENSG00000149483	TMEM138	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	62751144	A->G	-	ENSG00000185670	ZBTB3	protein_coding	three_prime_utr	.	.	Alu	0.210526
11	65775958	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0210526
11	65775996	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.038961
11	65775999	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0394737
11	65776023	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0243902
11	65776028	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
11	65776064	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0291262
11	65776067	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.02
11	65776085	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0222222
11	65776155	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0222222
11	65776697	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
11	65776862	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0233918
11	65776883	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
11	65776952	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0295858
11	65776959	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
11	65776989	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0973451
11	65777038	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.131783
11	65777057	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0504202
11	66520857	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	68756513	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.103704
11	72288892	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.136364
11	72289601	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	72289660	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72290687	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	72290727	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.125
11	72290898	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72291787	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	72292243	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0535714
11	74455722	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0375
11	74455740	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0307692
11	74455743	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0307692
11	74455795	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.2
11	74455796	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.1
11	74455801	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.368421
11	74455824	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.411765
11	74455825	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.263158
11	74455892	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0886076
11	74455946	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.271605
11	74455952	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0243902
11	74455955	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.128205
11	74455960	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0886076
11	74455965	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0298507
11	74455978	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0923077
11	74456050	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0273973
11	74456098	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.047619
11	74456111	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.117647
11	74456208	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.133333
11	74456220	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.257143
11	74456232	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0769231
11	74456242	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0714286
11	74456263	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.097561
11	74456285	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.111111
11	74456291	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.0606061
11	74456324	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.142857
11	74456326	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.230769
11	74456386	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.1
11	76994188	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.125
11	77021371	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.0888889
11	77025645	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.1
11	77025720	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.130435
11	78068582	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	88322415	A->G	-	ENSG00000109861	CTSC	protein_coding	three_prime_utr	.	.	Alu	0.3125
11	94416589	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	94416601	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.428571
11	94416611	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.923077
11	94417288	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.428571
12	14498895	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.3
12	14499806	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.25
12	27421344	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.3
12	27421384	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	27423514	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.545455
12	27423536	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	27695253	A->G	+	ENSG00000110841	PPFIBP1	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	42233626	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	42233692	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	42233716	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	42233725	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	42233740	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	42233745	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	42233759	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	42233785	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.125
12	42233914	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.3125
12	42233926	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.3125
12	42234047	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.125
12	42234078	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	42234880	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	42234905	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.190476
12	42234906	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	42234912	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	42234944	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	43787847	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	43787910	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.08
12	43787998	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	43788009	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	43788808	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0789474
12	50930302	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	50931826	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0298507
12	53296550	A->G	+	ENSG00000123349	PFDN5	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	59783729	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	59783751	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	59783752	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.727273
12	64448998	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	64450211	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	64450332	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	66123269	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0454545
12	66137369	A->G	-	ENSG00000228144	AC078927.1	protein_coding	three_prime_utr	.	.	Alu	1
12	66251150	A->G	+	ENSG00000284011	MIR6502	miRNA	three_prime_utr	.	.	Alu	0.0510949
12	66339376	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	66339403	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	66339415	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.1
12	66343331	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.5
12	66343336	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.125
12	66343388	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	66343400	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	68662930	A->G	+	ENSG00000127314	RAP1B	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	68662937	A->G	+	ENSG00000127314	RAP1B	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	68765537	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	68766365	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.3
12	68766366	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.3
12	68766618	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	68843224	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.292237
12	68843233	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.320833
12	68843234	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.121339
12	68843263	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.183673
12	68843273	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.08
12	68843276	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0725191
12	68843277	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0536398
12	68843293	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.103734
12	68843730	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	68843749	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.245614
12	68843754	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.435028
12	68843772	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.169903
12	68843778	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.102941
12	68843868	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0510638
12	68854929	A->G	-	ENSG00000135678	CPM	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	68855127	A->G	-	ENSG00000135678	CPM	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	68855768	A->G	-	ENSG00000135678	CPM	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	68855772	A->G	-	ENSG00000135678	CPM	protein_coding	three_prime_utr	.	.	Alu	0.0487805
12	69578042	A->G	+	ENSG00000166225	FRS2	protein_coding	three_prime_utr	.	.	Alu	0.7
12	71702353	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.3
12	71791913	A->G	+	ENSG00000080371	RAB21	protein_coding	three_prime_utr	.	.	Alu	0.2
12	71791944	A->G	+	ENSG00000080371	RAB21	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	75496243	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	89420341	A->G	-	ENSG00000139323	POC1B	protein_coding	three_prime_utr	.	.	Alu	0.428571
12	93503508	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	93504220	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.2
12	93504241	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.3
12	98548866	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.04
12	98548909	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	98548912	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0973451
12	98549033	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0258065
12	98549362	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0305344
12	98549436	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0243243
12	98605898	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	98733673	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0545455
12	98733696	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
13	19672405	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0769231
13	21375025	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0675676
13	21375108	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0625
13	45030399	A->G	+	ENSG00000223732	AL359706.1	lincRNA	three_prime_utr	.	.	Alu	0.133333
13	52689688	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	52689691	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.1875
13	52689700	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.466667
13	52689848	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.363636
13	52689891	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
13	52689901	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
13	52691083	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.121212
13	52691192	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52694709	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.222222
13	52694873	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
13	52694896	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	20366333	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.454545
14	20366357	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.210526
14	20366362	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	20366447	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	21460331	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.2
14	21460342	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	21460402	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	21460413	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	21460419	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.8
14	21460730	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.125
14	21460816	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	24125030	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	24125041	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	24125055	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	31093883	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	31094132	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	31094133	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	31094145	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	31094656	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	31095088	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31447179	A->G	-	ENSG00000250365	AL139353.2	antisense	three_prime_utr	.	.	Alu	0.0952381
14	31447738	A->G	-	ENSG00000250365	AL139353.2	antisense	three_prime_utr	.	.	Alu	0.210526
14	35050189	A->G	+	ENSG00000151327	FAM177A1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	35050192	A->G	+	ENSG00000151327	FAM177A1	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	52643014	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.475
14	52643092	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.0945946
14	52643105	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.16092
14	52776666	A->G	-	ENSG00000259049	AL139317.3	antisense	three_prime_utr	.	.	Alu	0.133333
14	55368247	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.125
14	67385323	A->G	+	ENSG00000134001	EIF2S1	protein_coding	three_prime_utr	.	.	Alu	0.129032
14	67385350	A->G	+	ENSG00000134001	EIF2S1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	70369297	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.25
14	71111801	A->G	+	ENSG00000100731	PCNX1	protein_coding	three_prime_utr	.	.	Alu	0.0722892
14	71111802	A->G	+	ENSG00000100731	PCNX1	protein_coding	three_prime_utr	.	.	Alu	0.060241
14	74058169	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0625
14	74058241	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.107143
14	74735827	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.115385
14	76205209	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0588235
14	76205240	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0555556
14	76206986	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	76207065	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.2
14	77508299	A->G	-	ENSG00000100596	SPTLC2	protein_coding	three_prime_utr	.	.	Alu	0.0547945
14	77511438	A->G	-	ENSG00000100596	SPTLC2	protein_coding	three_prime_utr	.	.	Alu	0.352941
14	89159564	A->G	-	ENSG00000053254	FOXN3	protein_coding	three_prime_utr	.	.	Alu	0.0681818
14	89160380	A->G	-	ENSG00000053254	FOXN3	protein_coding	three_prime_utr	.	.	Alu	0.0748299
14	95415416	A->G	-	ENSG00000176438	SYNE3	protein_coding	three_prime_utr	.	.	Alu	0.195122
14	95415432	A->G	-	ENSG00000176438	SYNE3	protein_coding	three_prime_utr	.	.	Alu	0.0810811
14	95415467	A->G	-	ENSG00000176438	SYNE3	protein_coding	three_prime_utr	.	.	Alu	0.217391
15	32605311	A->G	+	ENSG00000262728	AC123768.3	antisense	three_prime_utr	.	.	Alu	0.15
15	34231200	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34231275	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	34978719	A->G	-	ENSG00000198146	ZNF770	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	40662453	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	40662476	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	40662758	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.227273
15	40662845	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	40662856	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.125
15	40662866	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.285714
15	40662872	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	40662904	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.818182
15	40662905	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	40662961	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.2
15	40663247	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.416667
15	40663258	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	40663266	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.846154
15	40663317	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.136364
15	41900147	A->G	-	ENSG00000103966	EHD4	protein_coding	three_prime_utr	.	.	Alu	0.428571
15	41900150	A->G	-	ENSG00000103966	EHD4	protein_coding	three_prime_utr	.	.	Alu	0.108696
15	42258565	A->G	-	ENSG00000103978	TMEM87A	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	42258591	A->G	-	ENSG00000103978	TMEM87A	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	42531590	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.1
15	42542956	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	42543038	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	42543039	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0645161
15	42543150	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.1
15	42543292	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	42543296	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	42543450	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0571429
15	42567794	A->G	+	ENSG00000261822	AC018362.2	antisense	three_prime_utr	.	.	Alu	0.0869565
15	49126658	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.078125
15	49126659	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	49126763	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.108333
15	49126927	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.254545
15	49127249	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
15	51912998	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.25
15	51913246	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	51913452	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.172414
15	51913739	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0625
15	51914118	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51914287	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	51914953	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	51914954	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.545455
15	51914968	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	51914969	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.25
15	60422167	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	60422244	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.2
15	60422248	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.3
15	60422353	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.125
15	60422701	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	60422813	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.636364
15	63151362	A->G	-	ENSG00000185088	RPS27L	protein_coding	three_prime_utr	.	.	Alu	0.2
15	64171642	A->G	-	ENSG00000169118	CSNK1G1	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	65149688	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.25
15	65149712	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	65149798	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	69271422	A->G	+	ENSG00000138604	GLCE	protein_coding	three_prime_utr	.	.	Alu	0.375
15	78499995	A->G	+	ENSG00000136381	IREB2	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	84641585	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.307692
15	84641610	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.272727
15	84641973	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.307692
15	84641974	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.642857
15	84642240	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.133333
15	89196043	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.0506329
15	89196044	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	89196117	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.10219
15	89834654	A->G	-	ENSG00000157823	AP3S2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
15	90274684	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.230769
15	90277109	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.3
15	92946551	A->G	+	ENSG00000279765	AC013394.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	92946836	A->G	+	ENSG00000279765	AC013394.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	10936094	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	11837226	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	11837235	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	12660869	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	12660925	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	12661093	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.25
16	12663097	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	12663334	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.046875
16	14668644	A->G	+	ENSG00000103429	BFAR	protein_coding	three_prime_utr	.	.	Alu	0.08
16	14668793	A->G	+	ENSG00000103429	BFAR	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	15700333	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0253165
16	15700467	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	19120105	A->G	+	ENSG00000205730	ITPRIPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	21640015	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.25
16	21640172	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.2
16	21640175	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.125
16	21640494	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.25
16	21640506	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.818182
16	21640507	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.424242
16	21640546	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	21640547	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	21640707	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.8
16	21640710	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.2
16	21640720	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.571429
16	21641223	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	23463754	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	23465153	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.132075
16	23465205	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.114754
16	23465258	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	28966367	A->G	+	ENSG00000260853	AC109460.2	antisense	three_prime_utr	.	.	Alu	0.08
16	29666278	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0205479
16	29666297	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0314465
16	29667426	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0552147
16	29667777	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.028169
16	29667781	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	29667788	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0340909
16	29667815	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	29667854	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29668041	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.198347
16	29668111	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29668184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.19863
16	29668351	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	29668765	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.13986
16	29669127	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0210526
16	31358364	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.0229885
16	31358365	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.0465116
16	31358407	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.12
16	31358411	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	48352531	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48352542	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.1
16	48353251	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	48354263	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	48354269	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.5
16	48354333	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48354360	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	48354392	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.125
16	50673058	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	50673059	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.045977
16	50673135	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.057971
16	50673146	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	50673221	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.028169
16	50673255	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0465116
16	50673293	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	69325477	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	69325479	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	69342419	A->G	+	ENSG00000132603	NIP7	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	69342424	A->G	+	ENSG00000132603	NIP7	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	70247972	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	70248914	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	70249151	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	70249289	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	70249733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	70249823	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	74299646	A->G	+	ENSG00000103035	PSMD7	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	75445561	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	75446142	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	75599328	A->G	-	ENSG00000259992	AC025287.1	processed_transcript	three_prime_utr	.	.	Alu	0.0833333
16	77200058	A->G	+	ENSG00000103111	MON1B	protein_coding	three_prime_utr	.	.	Alu	0.1
16	87403158	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	three_prime_utr	.	.	Alu	1
16	89564054	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.0697674
16	89740474	A->G	+	ENSG00000158805	ZNF276	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	89889295	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	89889397	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.125
16	89889445	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	17213531	A->G	-	ENSG00000264187	AC055811.2	protein_coding	three_prime_utr	.	.	Alu	0.125
17	20237791	A->G	+	ENSG00000128487	SPECC1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	27314465	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	27314469	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	27314531	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	27314563	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	27623958	A->G	+	ENSG00000266728	AC015688.4	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	29549359	A->G	+	ENSG00000160551	TAOK1	protein_coding	three_prime_utr	.	.	Alu	0.428571
17	29551048	A->G	+	ENSG00000160551	TAOK1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	30186175	A->G	+	ENSG00000126653	NSRP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	30186185	A->G	+	ENSG00000126653	NSRP1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	30186190	A->G	+	ENSG00000126653	NSRP1	protein_coding	three_prime_utr	.	.	Alu	0.08
17	30958639	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0333333
17	30958692	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0895522
17	30958708	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	30958728	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
17	30958755	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
17	30958768	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.04
17	30958804	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0447761
17	30958828	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.046875
17	30958830	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0294118
17	32373457	A->G	+	ENSG00000010244	ZNF207	protein_coding	three_prime_utr	.	.	Alu	0.368421
17	35099104	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	37516815	A->G	-	ENSG00000275066	SYNRG	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	37612327	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.5
17	37612350	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.166667
17	38849622	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	39255073	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.185185
17	39255759	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39255801	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	39255803	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.25
17	39256055	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39256129	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.08
17	39256189	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39256238	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39259298	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	42991953	A->G	+	ENSG00000198863	RUNDC1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	43218074	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.130435
17	49295202	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.217391
17	49296666	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	49296668	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.2
17	49296739	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	49296740	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	57972462	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.341463
17	57972463	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.560976
17	57972464	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.341463
17	57972468	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.594595
17	59201772	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	59201794	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0487805
17	59201916	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	59202327	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0222222
17	59202463	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0246914
17	59204110	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.097561
17	64321513	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0363636
17	64321540	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0892857
17	64321541	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0535714
17	64321639	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	64321678	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.1
17	64322091	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.03125
17	64322174	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0377358
17	64322223	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.6
17	64322237	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	64322238	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.615385
17	64322264	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	64322274	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	64322286	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	64322303	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	64322304	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	64322323	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.40625
17	64322329	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.135135
17	64322340	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.114286
17	64322804	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0441176
17	64467781	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64467782	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64468320	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0441989
17	64468469	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.039604
17	64468472	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0853659
17	67339205	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75890182	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	75942998	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
17	75943126	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	75943193	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	75943979	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.130435
17	75944014	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.222222
17	75944359	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.515152
18	21631643	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.5
18	21631754	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.285714
18	32071913	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.105263
18	50392511	A->G	+	ENSG00000154839	SKA1	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	59329754	A->G	-	ENSG00000074695	LMAN1	protein_coding	three_prime_utr	.	.	Alu	0.0921053
18	59329953	A->G	-	ENSG00000074695	LMAN1	protein_coding	three_prime_utr	.	.	Alu	0.132653
19	11146834	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	11450544	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0985915
19	12078103	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	12078366	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	12078370	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	12078379	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.12
19	12078419	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.08
19	12079084	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	12079391	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	12079396	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	12079689	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	12079690	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	12079711	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	12079730	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	12079735	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.125
19	12080807	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	12080965	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.1
19	12632710	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	12632714	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	13773029	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	13773041	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	14734444	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
19	14734621	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	14735253	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.025641
19	14735314	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0694444
19	14735362	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0253165
19	14735363	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.025
19	16093075	A->G	+	ENSG00000167460	TPM4	protein_coding	three_prime_utr	.	.	Alu	0.3
19	16155665	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	16550730	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	16551976	A->G	-	ENSG00000268309	AC008764.3	antisense	three_prime_utr	.	.	Alu	0.0666667
19	18070688	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
19	18071034	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	18071071	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	18071190	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	18071207	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	18364380	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	18364404	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	18364534	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	18365540	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18365579	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	18365604	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.148148
19	18366731	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18367000	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18368003	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	19681495	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	19681526	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.5
19	19681588	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.125
19	19681603	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	19682268	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	19682337	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	19682345	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	19682359	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	19682381	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	19682407	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	19682423	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	19682450	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.1
19	19682483	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	19683065	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	19711249	A->G	-	ENSG00000105708	ZNF14	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	19792245	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.266667
19	19893143	A->G	+	ENSG00000267565	AC011477.3	antisense	three_prime_utr	.	.	Alu	0.166667
19	19893212	A->G	+	ENSG00000267565	AC011477.3	antisense	three_prime_utr	.	.	Alu	0.181818
19	21184055	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21185492	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21291610	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	38868062	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.04
19	38868079	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.04
19	38868389	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	38868422	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	38868517	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	38868550	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0731707
19	38868564	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	38868565	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	38869074	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	39491955	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.125
19	42087379	A->G	-	ENSG00000028277	POU2F2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	45549707	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	45552653	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	45552654	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	45552813	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	48453399	A->G	+	ENSG00000105447	GRWD1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	49521763	A->G	+	ENSG00000104870	FCGRT	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	49521764	A->G	+	ENSG00000104870	FCGRT	protein_coding	three_prime_utr	.	.	Alu	0.25
19	49521798	A->G	+	ENSG00000104870	FCGRT	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	52556196	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.615385
19	52556204	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	52556205	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	52556227	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	52556401	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	52556404	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	53066920	A->G	-	ENSG00000170949	ZNF160	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	54237106	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	54237118	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.127273
19	54237180	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.242424
19	54588722	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.5
19	54588729	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.3
19	54588730	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.3
19	54588752	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	54588759	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	54588765	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	54588766	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	54588770	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	54588796	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.666667
19	54588918	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.583333
19	54588940	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	54589383	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	55661834	A->G	+	ENSG00000063244	U2AF2	protein_coding	three_prime_utr	.	.	Alu	0.95
19	57214430	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57217518	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57217554	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	57807547	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	57807551	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57845172	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57860308	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	57860373	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57860381	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.178571
19	57860469	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.423077
19	57860478	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	57860489	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.125
19	57860490	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0882353
19	57860680	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.48
19	57860701	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.407407
19	57860879	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	57860881	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	57860987	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	57860997	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57861094	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	57861355	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	57861356	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	57861379	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	57861400	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	57861431	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0392157
19	57861448	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.03125
19	57861803	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0294118
19	57861817	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0428571
19	57861828	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0757576
19	57861847	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.16
19	57861852	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	57861853	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.119048
19	57861887	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	57862008	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	57862009	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57862048	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57863275	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57863790	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	57863992	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	57864295	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57864299	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57864300	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57864314	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57864334	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57864339	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.25
19	57864368	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	57864394	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57864406	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	57907124	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57907125	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.611111
20	18487709	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	18487734	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.2
20	18487769	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	32238321	A->G	+	ENSG00000101346	POFUT1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
20	32371813	A->G	+	ENSG00000171456	ASXL1	protein_coding	three_prime_utr	.	.	Alu	0.2
20	36892534	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	36892574	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.241379
20	36892628	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
20	45077465	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0333333
20	45077484	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0240964
20	45077504	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0216216
20	45077584	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0531915
20	45078404	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0547945
20	45078409	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0816327
20	45079064	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0280374
20	45079065	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0294118
20	45079094	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0707965
21	33264044	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.115385
21	33264793	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.173913
21	33265140	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.12
21	33296771	A->G	+	ENSG00000249624	AP000295.1	protein_coding	three_prime_utr	.	.	Alu	0.0227273
21	33296772	A->G	+	ENSG00000249624	AP000295.1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
21	33355754	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
21	33355756	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
21	33355762	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
21	33355789	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.12
21	33355869	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
21	33355971	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
21	33357713	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.4
21	33357788	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	33357789	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	33357790	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.833333
21	33357802	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.263158
21	33357804	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
21	33358271	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.151515
21	36293861	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.075
21	42909376	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	42909743	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.3125
21	42909744	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.125
21	42909760	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.1875
21	42909779	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.153846
21	42909780	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.307692
21	42909849	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	42909867	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.5
21	42909884	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	42909887	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.466667
21	42909896	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	42909937	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.533333
21	42909947	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.125
21	42909948	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.25
21	42910071	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.571429
21	42910245	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.3
21	42910246	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	42910253	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.153846
21	42910266	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	42910274	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	42910327	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.105263
21	42911607	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.545455
21	42911608	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	42911666	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	17110248	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0266667
22	17110322	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0263158
22	17110404	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.062069
22	17110418	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0222222
22	17110419	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	17110430	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0240964
22	17113215	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.406593
22	17113216	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.188889
22	17113247	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.447761
22	17113249	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0588235
22	17113258	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.188406
22	17113261	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.151515
22	17113268	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	17113273	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.08
22	17113311	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0757576
22	17113373	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0294118
22	17113380	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.564516
22	17113383	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.484848
22	17113384	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0461538
22	17113397	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0428571
22	17113415	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0384615
22	17113431	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0797101
22	17113432	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0724638
22	17113436	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0336134
22	17113471	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0694444
22	17180998	A->G	-	ENSG00000093072	ADA2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	17181099	A->G	-	ENSG00000093072	ADA2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
22	17702516	A->G	+	ENSG00000099968	BCL2L13	protein_coding	three_prime_utr	.	.	Alu	0.25
22	18091629	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	18095867	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	18097082	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.769231
22	18097788	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	18097823	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	20890609	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0416667
22	25724829	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.296296
22	25724884	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
22	25724900	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.347826
22	25724914	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.875
22	25724940	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.642857
22	25725026	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	25725027	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.466667
22	25725031	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	25725075	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	25725099	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.289474
22	25725107	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	25725112	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.047619
22	25725118	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.047619
22	25725119	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.232558
22	25725676	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	25725834	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.4
22	25725914	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.571429
22	25725931	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.1
22	26524375	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.2
22	26525261	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.307692
22	26525278	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	26525328	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	26525381	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	26525382	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	35331326	A->G	+	ENSG00000100284	TOM1	protein_coding	three_prime_utr	.	.	Alu	0.25
22	35659793	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.769231
22	35659860	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	35659866	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.3125
22	35659869	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.411765
22	35659870	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	35659883	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.1
22	35659911	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	35659932	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.121212
22	35659940	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0487805
22	35660002	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	35660344	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.113924
22	35660345	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
22	35660348	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.05
22	35660362	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.193182
22	35660363	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.345238
22	35660407	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	35660444	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.779221
22	35660445	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.644737
22	35660446	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	35660543	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.2
22	35660551	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.873239
22	35660583	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0581395
22	35660618	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0759494
22	35660685	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.621053
22	35660703	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.137615
22	35661199	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.09375
22	35661415	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.173913
22	39053570	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.2
22	39053594	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.3
22	41357996	A->G	+	ENSG00000100403	ZC3H7B	protein_coding	three_prime_utr	.	.	Alu	0.0724638
22	41599256	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.555556
22	41599280	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
22	41599288	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.25641
22	41600324	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.125
22	41600359	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	42381099	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.4
22	42381370	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	42382839	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.0517241
22	42383475	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	42383501	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
22	42383505	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
22	42383533	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.22
22	42383534	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.130435
22	42383631	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.382353
22	44170118	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	45193983	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.425926
22	45194325	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.0384615
22	45194408	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.47619
22	45194413	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.363636
22	45194421	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.148936
22	45194478	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	100023951	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.4
1	100024063	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.269231
1	121391909	A->G	+	ENSG00000171943	SRGAP2C	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	145746107	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.08
1	145746131	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	145923201	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.1
1	145925523	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.125
1	145935001	A->G	-	ENSG00000234222	LIX1L-AS1	antisense	three_prime_utr	.	.	Alu	0.0909091
1	148532275	A->G	-	ENSG00000270629	NBPF14	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	149555744	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	149555763	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.75
1	150731344	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0510563
1	150732023	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0243902
1	150732032	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0280172
1	150732161	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0601852
1	151118851	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	1
1	151118856	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.9375
1	151118858	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151119242	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	151119249	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	151119253	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151119285	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151119291	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151119304	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	151119353	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151119354	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	151119360	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	151120515	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	151121699	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151121700	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.4
1	151123689	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	155881785	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	155881854	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0444444
1	160289715	A->G	-	ENSG00000122218	COPA	protein_coding	three_prime_utr	.	.	Alu	0.0208333
1	160996502	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0298507
1	160996586	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	160996942	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0980392
1	160996946	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.145833
1	160997939	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	161367027	A->G	+	ENSG00000188931	CFAP126	protein_coding	three_prime_utr	.	.	Alu	0.2
1	168244278	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
1	168244368	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0638298
1	168249419	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	168251089	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	168251102	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	168251228	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0289855
1	168251236	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	168251299	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0363636
1	173891664	A->G	+	ENSG00000185278	ZBTB37	protein_coding	three_prime_utr	.	.	Alu	0.125
1	173891670	A->G	+	ENSG00000185278	ZBTB37	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	179073340	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	179073347	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.375
1	179073532	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179073770	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.243902
1	179074868	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	179074869	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.131579
1	179356235	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.097561
1	179356607	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
1	179356909	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	179356910	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
1	179357143	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.26087
1	179357159	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	179357160	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	179357161	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	179357283	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	179357303	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.5
1	179357332	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.3125
1	179357342	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	179357355	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	179357364	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	179357440	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	179357463	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179357475	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179357638	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179357639	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.3
1	179357660	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179357661	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	179357708	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	179357743	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.15
1	179357747	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
1	179357751	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	179357873	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.413793
1	179357916	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	179862765	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	three_prime_utr	.	.	Alu	0.0224719
1	185297252	A->G	-	ENSG00000116679	IVNS1ABP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	204550679	A->G	+	ENSG00000198625	MDM4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	204552584	A->G	+	ENSG00000198625	MDM4	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	205769561	A->G	-	ENSG00000117280	RAB29	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	220814624	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	220814704	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	225983704	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	225984081	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.030303
1	226707456	A->G	-	ENSG00000143772	ITPKB	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	243305851	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	101271698	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	108507724	A->G	+	ENSG00000135968	GCC2	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	113205242	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.5
2	127844009	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.2
2	127847535	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	128193273	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	128193917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0746269
2	128193937	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.107692
2	128194384	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
2	131149520	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	three_prime_utr	.	.	Alu	0.0828402
2	152120262	A->G	-	ENSG00000115145	STAM2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	159770082	A->G	-	ENSG00000136536	7-Mar	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	159770083	A->G	-	ENSG00000136536	7-Mar	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	159770174	A->G	-	ENSG00000136536	7-Mar	protein_coding	three_prime_utr	.	.	Alu	0.15625
2	159804439	A->G	-	ENSG00000054219	LY75	protein_coding	three_prime_utr	.	.	Alu	0.037037
2	171322478	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	171322480	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	171322493	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	175924645	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.217391
2	175924730	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	175924750	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.823529
2	175924895	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.193548
2	175926356	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	175926453	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	175926454	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.592593
2	175926455	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	175926492	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.189189
2	177219923	A->G	+	ENSG00000170144	HNRNPA3	protein_coding	three_prime_utr	.	.	Alu	0.0987654
2	190934060	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.114286
2	190934853	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	190934854	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.140625
2	190934866	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.415094
2	200909556	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	200910035	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	200910072	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.15
2	200977849	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.272727
2	200978650	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.25
2	200978652	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.125
2	200978656	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.846154
2	200978670	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.117647
2	201164032	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0677966
2	201164167	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0615385
2	201165326	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	201165332	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	201165400	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	201165437	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	201165445	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	201165472	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0512821
2	201165481	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	201165506	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	201165515	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	201165533	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	201165534	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	201165546	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	201167248	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0377358
2	201167271	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0212766
2	201167408	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0266667
2	201217939	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	201218474	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	201219032	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	201219041	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0681818
2	201219252	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	201286881	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	201287275	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	202876904	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	202876914	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	202879069	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	202879483	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	202879682	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	202880015	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	202880343	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	202880447	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	202880448	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	202880472	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.5625
2	202880495	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	202880501	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	203297388	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297398	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	203297449	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	203297450	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	203297485	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	203297518	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	203297524	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	203298156	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	203305478	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	206117094	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.133333
2	206117107	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.117647
2	206117531	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.454545
2	206117532	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.181818
2	206117533	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.818182
2	206118717	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.272727
2	206118767	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.153846
2	206118831	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.3
2	206119036	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.454545
2	206119041	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.272727
2	206119042	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.181818
2	206119073	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.363636
2	206119079	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.2
2	206122403	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	206122595	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	206122596	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	206122616	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.8
2	206122766	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	206122986	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	207754528	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	207754534	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	207754591	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	207754807	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.75
2	207755405	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.705882
2	216501721	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.106383
2	223757050	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	223757057	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	223757058	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	223757416	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	223757525	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.1
2	223757534	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	223757561	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	223757567	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	230819411	A->G	+	ENSG00000135932	CAB39	protein_coding	three_prime_utr	.	.	Alu	0.189474
3	101823520	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	101823609	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.106383
3	101823667	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0540541
3	101823884	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.166667
3	101823984	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.105263
3	101824379	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.113208
3	101824448	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0769231
3	101824452	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0487805
3	101824499	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.117647
3	101824510	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0555556
3	101824542	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0625
3	101824588	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.1875
3	101824592	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.125
3	101824609	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.153846
3	101824627	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.230769
3	101826881	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	101826922	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	101826935	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	101826945	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	101826953	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.538462
3	101827013	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	120326348	A->G	-	ENSG00000163428	LRRC58	protein_coding	three_prime_utr	.	.	Alu	0.0363636
3	128071406	A->G	+	ENSG00000175792	RUVBL1	protein_coding	three_prime_utr	.	.	Alu	0.233333
3	136150861	A->G	-	ENSG00000174579	MSL2	protein_coding	three_prime_utr	.	.	Alu	0.100559
3	142160269	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142160883	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	142160954	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	142160968	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	142161353	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	142162072	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	142162073	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	142162079	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.25
3	142163717	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142163830	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	1
3	142184720	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.545455
3	155943165	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.2
3	160435383	A->G	+	ENSG00000213186	TRIM59	protein_coding	three_prime_utr	.	.	Alu	0.2
3	170089159	A->G	-	ENSG00000268220	AC008040.5	antisense	three_prime_utr	.	.	Alu	0.142857
3	170303787	A->G	+	ENSG00000163558	PRKCI	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	172505967	A->G	-	ENSG00000121858	TNFSF10	protein_coding	three_prime_utr	.	.	Alu	0.0338983
3	177021774	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	three_prime_utr	.	.	Alu	0.173077
3	177021814	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	three_prime_utr	.	.	Alu	0.0550459
3	177021857	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	three_prime_utr	.	.	Alu	0.0514706
3	179397623	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.130178
3	179397985	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.105263
3	179398104	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.159091
3	179398121	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.0731707
3	179398124	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.105263
3	179398210	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.121212
3	179398236	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.105263
3	179399225	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0444444
3	179399349	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	179399378	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0333333
3	179399475	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.04
3	179399476	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.04
3	183491628	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.103448
3	188879039	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.72
3	188880270	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	188880305	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	196352413	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0857143
3	196828985	A->G	+	ENSG00000180370	PAK2	protein_coding	three_prime_utr	.	.	Alu	0.0509804
3	196831730	A->G	+	ENSG00000180370	PAK2	protein_coding	three_prime_utr	.	.	Alu	0.0576923
3	197043210	A->G	-	ENSG00000075711	DLG1	protein_coding	three_prime_utr	.	.	Alu	0.538462
4	102753866	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0392157
4	128036549	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	128036554	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	128036555	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	128036609	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	128036612	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.125
4	128037004	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	128037579	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	139045646	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0241935
4	139045656	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0245902
4	139045658	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0314961
4	139045698	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0449438
4	139045701	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0238095
4	152622493	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	152622852	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.12
4	152622867	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.12
4	152622894	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	152622904	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.64
4	152622905	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.125
4	152622909	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.318182
4	152622939	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.454545
4	152622952	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.4
4	152623029	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	152623039	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.130435
4	152623049	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	152623054	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.384615
4	152623068	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	152623102	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0588235
4	152623118	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	152623662	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.162162
4	152623677	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	152623683	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.40625
4	152623687	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.3125
4	152623708	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.15
4	152623714	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.263158
4	152623770	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	152623773	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.3125
4	152623774	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.5
4	152623800	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	152623806	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	152623825	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.4
4	152623844	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	152624343	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.031746
4	152624382	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0588235
4	152624428	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.178571
4	152624479	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	152624493	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	152624539	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	152624544	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.103448
4	152625608	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0327869
4	165076913	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.25
4	165077020	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	165077073	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.125
4	165077074	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.25
4	165079016	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	168357599	A->G	-	ENSG00000181381	DDX60L	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	176331087	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.287356
4	176331099	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.054878
4	176331176	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.527473
5	115206616	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.9
5	115206789	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	115207624	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.470588
5	115830603	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	115830748	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.043956
5	119394706	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	119394733	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	119394736	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	119394746	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.266667
5	119394748	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	119394816	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.25
5	119394842	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.217391
5	119394869	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	122027184	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
5	122028351	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126625319	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131201721	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	131201913	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	131202350	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	131203212	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.28
5	131203402	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	134402298	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0277778
5	134402367	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0344828
5	134900672	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	143225353	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	143225363	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.357143
5	143225373	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.2
5	143225436	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.125
5	143225441	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.36
5	143225451	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	143225472	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	143225871	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.5
5	143226115	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.125
5	143226210	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.125
5	143226224	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.125
5	149983749	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.3
5	151030640	A->G	-	ENSG00000145901	TNIP1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
5	151268176	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.150943
5	151268178	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0583333
5	151268180	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0227273
5	151268188	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.08
5	151268352	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0230263
5	151268584	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.056
5	151745927	A->G	-	ENSG00000177556	ATOX1	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	154054883	A->G	+	ENSG00000037749	MFAP3	protein_coding	three_prime_utr	.	.	Alu	1
5	157086464	A->G	-	ENSG00000135077	HAVCR2	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	157477921	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.583333
5	157477942	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.416667
5	157477957	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.466667
5	157478388	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.846154
5	157478389	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	157478412	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	106970848	A->G	-	ENSG00000272398	CD24	protein_coding	three_prime_utr	.	.	Alu	0.2
6	108042167	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.392857
6	108042172	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.482759
6	108042173	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	108042214	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	108042239	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.615385
6	108042537	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.238095
6	108042554	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	108042572	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	108042610	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	108042615	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.170732
6	108042617	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
6	108042685	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.432432
6	108042693	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.264706
6	108043041	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	109463266	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	109464684	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.125
6	111026308	A->G	+	ENSG00000197498	RPF2	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	111267674	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	111267700	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	116244436	A->G	+	ENSG00000236326	AL050331.2	antisense	three_prime_utr	.	.	Alu	0.170732
6	116244443	A->G	+	ENSG00000236326	AL050331.2	antisense	three_prime_utr	.	.	Alu	0.45
6	118813772	A->G	-	ENSG00000111877	MCM9	protein_coding	three_prime_utr	.	.	Alu	1
6	119178352	A->G	-	ENSG00000111885	MAN1A1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	149449082	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.6
6	149725421	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	149725600	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.7
6	149772198	A->G	+	ENSG00000120265	PCMT1	protein_coding	three_prime_utr	.	.	Alu	0.178571
6	163565982	A->G	+	ENSG00000112531	QKI	protein_coding	three_prime_utr	.	.	Alu	0.0828025
6	163566380	A->G	+	ENSG00000112531	QKI	protein_coding	three_prime_utr	.	.	Alu	0.0638298
6	163566383	A->G	+	ENSG00000112531	QKI	protein_coding	three_prime_utr	.	.	Alu	0.390071
6	163566452	A->G	+	ENSG00000112531	QKI	protein_coding	three_prime_utr	.	.	Alu	0.0689655
7	102456966	A->G	-	ENSG00000160993	ALKBH4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	102637153	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.157895
7	106906386	A->G	+	ENSG00000105851	PIK3CG	protein_coding	three_prime_utr	.	.	Alu	0.0740741
7	128309376	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	128503013	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.157895
7	128503182	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	128503212	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	128503513	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	128504264	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	135676134	A->G	+	ENSG00000243317	STMP1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
7	139047445	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	150331697	A->G	+	ENSG00000188707	ZBED6CL	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	150331699	A->G	+	ENSG00000188707	ZBED6CL	protein_coding	three_prime_utr	.	.	Alu	0.307692
7	155776208	A->G	+	ENSG00000184863	RBM33	protein_coding	three_prime_utr	.	.	Alu	0.108108
7	156970432	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.5
7	156971504	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	103399911	A->G	-	ENSG00000164933	SLC25A32	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	108486791	A->G	+	ENSG00000104412	EMC2	protein_coding	three_prime_utr	.	.	Alu	0.785714
8	140516228	A->G	+	ENSG00000104472	CHRAC1	protein_coding	three_prime_utr	.	.	Alu	0.0273973
8	141141897	A->G	+	ENSG00000105339	DENND3	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	141141963	A->G	+	ENSG00000105339	DENND3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	141141977	A->G	+	ENSG00000105339	DENND3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	144293571	A->G	+	ENSG00000185122	HSF1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	144293579	A->G	+	ENSG00000185122	HSF1	protein_coding	three_prime_utr	.	.	Alu	0.125
9	112471599	A->G	+	ENSG00000119471	HSDL2	protein_coding	three_prime_utr	.	.	Alu	0.021978
9	112471657	A->G	+	ENSG00000119471	HSDL2	protein_coding	three_prime_utr	.	.	Alu	0.020202
9	112684270	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	112684291	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.24
9	112685146	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
9	112686699	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.125
9	112686748	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	112686765	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	113261005	A->G	+	ENSG00000176386	CDC26	protein_coding	three_prime_utr	.	.	Alu	0.0392157
9	123380442	A->G	-	ENSG00000119522	DENND1A	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	128309290	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
9	129827915	A->G	-	ENSG00000136819	C9orf78	protein_coding	three_prime_utr	.	.	Alu	0.0215054
9	134906030	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.107143
9	134906142	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
9	134906160	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.03125
9	134906190	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.116667
9	134906819	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0252101
9	134906845	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.037037
9	134906854	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0447761
9	134906859	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
9	134906867	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0235294
9	134906924	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.025
9	134906928	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.075
9	134906948	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.103448
9	134906950	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0365854
9	134906960	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0322581
9	134906964	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0638298
9	134906989	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.028169
9	134907003	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.08
9	134907010	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0375
9	134907020	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.292308
9	134907046	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0377358
9	134907050	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.226415
9	134907058	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.047619
9	134907066	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	134907070	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
10	100232631	A->G	-	ENSG00000227492	AL138921.1	antisense	three_prime_utr	.	.	Alu	0.04
10	100232640	A->G	-	ENSG00000227492	AL138921.1	antisense	three_prime_utr	.	.	Alu	0.0555556
10	102738126	A->G	+	ENSG00000156398	SFXN2	protein_coding	three_prime_utr	.	.	Alu	0.15
10	104125869	A->G	+	ENSG00000156384	SFR1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
10	131912135	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	three_prime_utr	.	.	Alu	0.473684
10	131912596	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	three_prime_utr	.	.	Alu	0.366667
10	133300331	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	three_prime_utr	.	.	Alu	0.08
10	133300358	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	108365923	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.125
11	108365935	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	108365980	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	108367092	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	118409252	A->G	+	ENSG00000167283	ATP5MG	protein_coding	three_prime_utr	.	.	Alu	0.560345
11	118750989	A->G	-	ENSG00000110367	DDX6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	108785196	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	108785245	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.1
12	108785258	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	112971006	A->G	+	ENSG00000111331	OAS3	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	116714577	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	116715110	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	116715165	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	120460803	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	120460843	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	120461119	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	122144903	A->G	+	ENSG00000175727	MLXIP	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	122769110	A->G	+	ENSG00000139726	DENR	protein_coding	three_prime_utr	.	.	Alu	0.152047
12	122769132	A->G	+	ENSG00000139726	DENR	protein_coding	three_prime_utr	.	.	Alu	0.171429
12	123410966	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.08
12	123411115	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	123412368	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.125
12	123413120	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.545455
12	123661526	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	123661562	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
12	123661575	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	123662022	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.16
12	125026810	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	125027387	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.2
12	125027611	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.4
12	125027988	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.357143
12	131922207	A->G	+	ENSG00000177169	ULK1	protein_coding	three_prime_utr	.	.	Alu	0.16
12	132721299	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.184211
12	132769976	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	132770150	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	105049500	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.192308
14	105049513	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	101071470	A->G	+	ENSG00000154237	LRRK1	protein_coding	three_prime_utr	.	.	Alu	0.266667