Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	effect	AA_change	Repeat	AD103_rel
MT	4917	A->G	+	ENSG00000198763	MT-ND2	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	1
MT	9120	A->G	+	ENSG00000198899	MT-ATP6	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	1
MT	11251	A->G	+	ENSG00000198886	MT-ND4	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	1
MT	15236	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	1
MT	15326	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	1
MT	15607	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	synonymous_variant	p.Lys->Lys	Alu	1
X	315276	A->G	-	ENSG00000178605	GTPBP6	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.5
X	1412794	A->G	-	ENSG00000236017	ASMTL-AS1	antisense	CDS	missense_variant	p.His->Arg	Alu	0.708333
X	2221159	A->G	-	ENSG00000169084	DHRSX	protein_coding	CDS	missense_variant	p.His->Arg	Alu	1
4	2938295	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.His->Arg	Alu	0.125
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.578947
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.157895
7	6155080	A->G	+	ENSG00000106346	USP42	protein_coding	exon	missense_variant	p.Lys->Glu	Alu	0.68
4	6609297	A->G	+	ENSG00000013288	MAN2B2	protein_coding	CDS	missense_variant&splice_region_variant	p.Arg->Gly	Alu	0.12
4	6863418	A->G	+	ENSG00000170871	KIAA0232	protein_coding	CDS	synonymous_variant	p.Gly->Gly	Alu	0.468085
12	7097002	A->G	-	ENSG00000139178	C1RL	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.4375
12	7936170	A->G	-	ENSG00000059804	SLC2A3	protein_coding	five_prime_utr	upstream_gene_variant	.	Alu	1
12	8515301	A->G	+	ENSG00000166527	CLEC4D	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	1
12	10315316	A->G	+	ENSG00000134539	KLRD1	protein_coding	exon	missense_variant	p.Lys->Arg	Alu	0.416667
10	11565595	A->G	-	ENSG00000148429	USP6NL	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.0869565
10	11565596	A->G	-	ENSG00000148429	USP6NL	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0869565
10	11565620	A->G	-	ENSG00000148429	USP6NL	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.1
6	12037756	A->G	+	ENSG00000095951	HIVEP1	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.153846
6	12037770	A->G	+	ENSG00000095951	HIVEP1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.277778
1	15930558	A->G	+	ENSG00000065526	SPEN	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.453333
19	16093060	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	non_coding_transcript_exon_variant	.	Alu	0.103448
20	17659159	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.110169
20	17659189	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0518519
19	18071210	A->G	-	ENSG00000096996	IL12RB1	protein_coding	Intron	stop_lost	p.Ter->Trp	Alu	0.0833333
19	18071260	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.24
19	18071289	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.05
19	18071296	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.228571
19	18071320	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.375
19	18071325	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.0625
19	18280475	A->G	-	ENSG00000130522	JUND	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.432704
16	18868647	A->G	-	ENSG00000157106	SMG1	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	1
16	18896930	A->G	-	ENSG00000157106	SMG1	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.566038
19	19791686	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	non_coding_transcript_exon_variant	.	Alu	0.153846
19	19791705	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	non_coding_transcript_exon_variant	.	Alu	0.181818
19	19792444	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	exon	non_coding_transcript_exon_variant	.	Alu	0.153846
22	22687214	A->G	+	ENSG00000211659	IGLV3-25	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.2
22	22698137	A->G	+	ENSG00000211660	IGLV2-23	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.0545455
22	22713143	A->G	+	ENSG00000211662	IGLV3-21	IG_V_gene	CDS	synonymous_variant	p.Glu->Glu	Alu	0.09375
22	22819687	A->G	+	ENSG00000211670	IGLV3-9	IG_V_gene	CDS	missense_variant	p.Ile->Val	Alu	0.4
22	22881224	A->G	+	ENSG00000211673	IGLV3-1	IG_V_gene	CDS	synonymous_variant	p.Pro->Pro	Alu	0.222222
22	22881258	A->G	+	ENSG00000211673	IGLV3-1	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.166667
19	23359452	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0465116
19	23359496	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.0491803
19	23359502	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.111111
19	23360527	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.311927
18	26081302	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.176471
18	26081323	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.166667
18	26081328	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
18	26081329	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
18	26081358	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.2
12	27030182	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.103448
12	27030183	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0967742
12	27654803	A->G	+	ENSG00000110841	PPFIBP1	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.538462
15	28146325	A->G	-	ENSG00000128731	HERC2	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.333333
8	29188526	A->G	-	ENSG00000197892	KIF13B	protein_coding	exon	missense_variant	p.Tyr->Cys	Alu	0.705882
6	29943540	A->G	+	ENSG00000206503	HLA-A	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.270968
6	29944139	A->G	+	ENSG00000206503	HLA-A	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.933333
6	31271074	A->G	-	ENSG00000204525	HLA-C	protein_coding	exon	splice_region_variant&synonymous_variant	p.Ala->Ala	Alu	1
1	32170001	A->G	+	ENSG00000025800	KPNA6	protein_coding	exon	missense_variant	p.Glu->Gly	Alu	0.25
6	32759011	A->G	-	ENSG00000232629	HLA-DQB2	protein_coding	CDS	missense_variant	p.Asp->Gly	Alu	1
6	32761662	A->G	-	ENSG00000232629	HLA-DQB2	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.954545
21	33262623	A->G	+	ENSG00000159110	IFNAR2	protein_coding	exon	synonymous_variant	p.Leu->Leu	Alu	0.0689655
21	33550950	A->G	+	ENSG00000159140	SON	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.0641026
21	33551013	A->G	+	ENSG00000159140	SON	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.0742358
20	35713770	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0526316
20	35713827	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0273973
17	36195866	A->G	-	ENSG00000276085	CCL3L1	protein_coding	CDS	synonymous_variant	p.Arg->Arg	Alu	0.269406
6	38003749	A->G	+	ENSG00000156639	ZFAND3	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.153846
22	38961629	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	0.131313
13	40951694	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.176471
13	40951697	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.294118
13	40951700	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.444444
22	42215003	A->G	-	ENSG00000100207	TCF20	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.652174
20	44956402	A->G	-	ENSG00000101104	PABPC1L	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.487805
13	45516236	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.28
3	49360949	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.25
3	49360951	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.24
3	49360990	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.2
10	49932105	A->G	-	ENSG00000227345	PARG	protein_coding	exon	missense_variant	p.Ile->Val	Alu	0.564103
22	50077427	A->G	-	ENSG00000100427	MLC1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.606061
12	53296435	A->G	+	ENSG00000123349	PFDN5	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.294118
2	54051001	A->G	+	ENSG00000170634	ACYP2	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.142857
2	54051007	A->G	+	ENSG00000170634	ACYP2	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.125
19	54222756	A->G	-	ENSG00000204577	LILRB3	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.432432
19	54596482	A->G	+	ENSG00000104974	LILRA1	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.303571
4	56931099	A->G	+	ENSG00000084093	REST	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.0704225
11	57552480	A->G	-	ENSG00000156587	UBE2L6	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0681818
11	61438300	A->G	+	ENSG00000167985	SDHAF2	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.181818
20	62813277	A->G	+	ENSG00000060491	OGFR	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.928571
17	64350416	A->G	-	ENSG00000261371	PECAM1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	1
17	64520576	A->G	+	ENSG00000258890	CEP95	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.461538
16	66548015	A->G	-	ENSG00000166548	TK2	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.105263
12	68766820	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.272727
12	68766837	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.230769
12	68766859	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.133333
14	73491067	A->G	+	ENSG00000170468	RIOX1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	1
7	73553590	A->G	-	ENSG00000106635	BCL7B	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.181818
2	73732623	A->G	-	ENSG00000144034	TPRKB	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	0.384615
2	73732626	A->G	-	ENSG00000144034	TPRKB	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.272727
2	73732627	A->G	-	ENSG00000144034	TPRKB	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.25
4	83484140	A->G	-	ENSG00000163322	ABRAXAS1	protein_coding	Intron	non_coding_transcript_exon_variant	.	Alu	0.125
2	88947399	A->G	-	ENSG00000243466	IGKV1-5	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.0617284
2	89010270	A->G	-	ENSG00000241755	IGKV1-9	IG_V_gene	CDS	synonymous_variant	p.Arg->Arg	Alu	0.142857
2	89085302	A->G	-	ENSG00000244437	IGKV3-15	IG_V_gene	CDS	missense_variant	p.Arg->Gly	Alu	0.111111
1	89133387	A->G	-	ENSG00000213512	GBP7	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	1
2	89142771	A->G	-	ENSG00000239951	IGKV3-20	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.0862069
1	93158839	A->G	-	ENSG00000117500	TMED5	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0204082
1	93158841	A->G	-	ENSG00000117500	TMED5	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.030303
1	93158861	A->G	-	ENSG00000117500	TMED5	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0701754
2	95899186	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.25
2	95899211	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.166667
2	95904765	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	synonymous_variant	p.Arg->Arg	Alu	0.111111
2	95904788	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.16
2	95904802	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.241379
2	96628594	A->G	-	ENSG00000114982	KANSL3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
2	96628604	A->G	-	ENSG00000114982	KANSL3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.3
7	99493532	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	synonymous_variant	p.Leu->Leu	Alu	0.0259067
8	102829408	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.147222
14	106062260	A->G	-	ENSG00000211938	IGHV3-7	IG_V_gene	CDS	missense_variant	p.Asp->Gly	Alu	0.1
14	106062354	A->G	-	ENSG00000211938	IGHV3-7	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.137931
14	106537949	A->G	-	ENSG00000211964	IGHV3-48	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.285714
14	106578971	A->G	-	ENSG00000211966	IGHV5-51	IG_V_gene	CDS	missense_variant	p.Lys->Glu	Alu	0.473684
6	107956062	A->G	-	ENSG00000025796	SEC63	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.166667
6	107956063	A->G	-	ENSG00000025796	SEC63	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.166667
2	108758496	A->G	+	ENSG00000153201	RANBP2	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.454545
10	112449659	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.138889
1	115992043	A->G	+	ENSG00000163393	SLC22A15	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.533333
1	120168929	A->G	-	ENSG00000265808	SEC22B	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	1
10	124762529	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.0625
10	124762548	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	synonymous_variant	p.Thr->Thr	Alu	0.0540541
10	124762550	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.0645161
10	131911600	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.497207
10	133297335	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.636364
7	142801067	A->G	+	ENSG00000211772	TRBC2	TR_C_gene	CDS	missense_variant	p.Lys->Glu	Alu	1
5	144169846	A->G	-	ENSG00000145817	YIPF5	protein_coding	Intergenic	missense_variant&splice_region_variant	p.Lys->Arg	Alu	0.0597015
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	exon	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0572687
X	156023093	A->G	+	ENSG00000182484	WASH6P	transcribed_unprocessed_pseudogene	Intron	downstream_gene_variant	.	Alu	0.666667
1	160332454	A->G	-	ENSG00000122218	COPA	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.0754717
1	161510073	A->G	+	ENSG00000143226	FCGR2A	protein_coding	exon	splice_region_variant&synonymous_variant	p.Gln->Gln	Alu	0.0791367
1	174221000	A->G	+	ENSG00000152061	RABGAP1L	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.0697674
5	177136896	A->G	+	ENSG00000165671	NSD1	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.125
2	177230923	A->G	-	ENSG00000116044	NFE2L2	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.571429
4	189943229	A->G	+	ENSG00000109536	FRG1	protein_coding	exon	synonymous_variant	p.Lys->Lys	Alu	0.0625
4	189952224	A->G	+	ENSG00000109536	FRG1	protein_coding	exon	missense_variant	p.Lys->Glu	Alu	0.272727
4	189957425	A->G	+	ENSG00000109536	FRG1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.525
2	201142712	A->G	+	ENSG00000003402	CFLAR	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.2
2	218235391	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	downstream_gene_variant	.	Alu	0.0526316
1	225786879	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.357143
1	225786912	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.548387
1	225786942	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.0833333
1	225786943	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.2
19	57864892	A->G	+	ENSG00000204514	ZNF814	protein_coding	exon	.	.	Alu	0.185185
19	57864915	A->G	+	ENSG00000204514	ZNF814	protein_coding	exon	.	.	Alu	0.111111
6	26172460	A->G	+	ENSG00000274290	HIST1H2BE	protein_coding	five_prime_utr	.	.	Alu	0.166667
21	37410605	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.5
21	37410607	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.133333
21	37410645	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.2
7	66740097	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.0714286
7	66740100	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.0689655
10	72220134	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0833333
10	72220174	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0465116
10	72220182	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0444444
10	72220186	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0681818
10	72220218	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0444444
10	72220232	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0408163
10	72220235	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0425532
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.166667
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.229167
8	143590731	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.117647
3	179325235	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0549451
3	179325255	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0222222
17	398690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
17	398800	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	398801	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
17	398930	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	398933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	398938	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
17	399238	A->G	-	.	.	.	Intergenic	.	.	Alu	0.155556
17	399241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
17	399588	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
17	399613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.151515
17	399662	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
17	399687	A->G	-	.	.	.	Intergenic	.	.	Alu	0.826087
17	400428	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	400429	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
16	587865	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	587906	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
16	587945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.391304
16	587946	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
16	588480	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
16	588486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.875
18	787566	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.2
18	787629	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.153846
18	787634	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.181818
X	1269853	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.142857
X	1382798	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
X	1382857	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
X	1382959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383097	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	1383150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
X	1383184	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1383214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383215	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1383237	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
X	1383364	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
X	1383390	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	1383408	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
X	1383415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	1383434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1383451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1383460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.533333
X	1383461	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1383467	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
X	1383483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	1383515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1383524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.47619
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4375
X	1383593	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0857143
X	1383594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0857143
X	1383610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
X	1383794	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	1383849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.444444
X	1383870	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
X	1383872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
X	1383919	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	1383929	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1383941	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	1383983	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383993	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1384026	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
X	1384034	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1384038	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
X	1384085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.65625
X	1384095	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
X	1384107	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
X	1384128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.289474
X	1384165	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0612245
X	1384390	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1384977	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0444444
X	1384983	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0612245
X	1385005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.196078
X	1385006	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0392157
X	1385010	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	1385022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1385081	A->G	-	.	.	.	Intergenic	.	.	Alu	0.238095
X	1385087	A->G	-	.	.	.	Intergenic	.	.	Alu	0.238095
X	1385122	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	1385157	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	1385158	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
X	1385192	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1385218	A->G	-	.	.	.	Intergenic	.	.	Alu	0.129032
X	1385222	A->G	-	.	.	.	Intergenic	.	.	Alu	0.138889
17	1524456	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.2
1	1884076	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.533333
1	1884166	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1884344	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1884349	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.384615
1	1884350	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.384615
1	1886300	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.545455
1	1886312	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2206454	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.2
19	2293976	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
4	2503127	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
18	2701287	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.125
18	2701290	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.125
18	2702199	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.142857
7	2737502	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.166667
X	2744183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
X	2744186	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
X	2744192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0754717
X	2744198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
X	2744201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	2744215	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	2744216	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	2744227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	2744230	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
X	2744255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.229508
X	2744263	A->G	+	.	.	.	Intergenic	.	.	Alu	0.06
X	2744277	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0655738
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	2744279	A->G	+	.	.	.	Intergenic	.	.	Alu	0.355932
X	2744287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
X	2744292	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
X	2744299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0701754
X	2744736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	2744737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	2744742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	2744772	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
X	2744773	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	2745531	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
X	2745683	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2745761	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
X	2745773	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	2745779	A->G	+	.	.	.	Intergenic	.	.	Alu	0.642857
7	2756911	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.181818
7	2756955	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.125
7	2757027	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.125
7	2757028	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.25
7	2757069	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.4
7	2757315	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.130435
7	2757318	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.12
2	3541896	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.1
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.25
2	3541931	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	3541935	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.08
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.238095
11	3698471	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.5
11	3698483	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.6
19	3759207	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.235294
17	4713552	A->G	+	ENSG00000141480	ARRB2	protein_coding	Intergenic	.	.	Alu	0.173913
20	4819052	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.0666667
3	5127752	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.2
7	5326574	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.545455
17	5487171	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.111111
17	5487196	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.157895
20	5601569	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0555556
7	6751891	A->G	+	ENSG00000187953	PMS2CL	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
6	7173302	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.142857
12	7923558	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.142857
12	7923563	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.461538
12	7923600	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.2
12	7923841	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0555556
12	7923842	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.216216
12	7923907	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	7923936	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.1
12	7923975	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.16
19	8472683	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.2
17	8943203	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.1
11	9172883	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9230369	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.3
11	9289216	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.363636
11	9291672	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.111111
2	9523944	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.0588235
2	9618789	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.2
12	9659639	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.125
1	9927426	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9927962	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.133333
1	9928049	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.384615
1	9928055	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.181818
1	9928287	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9928632	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.117647
1	9928633	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
1	9928634	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
12	10129821	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.0571429
3	10152248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0652174
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0638298
3	10152258	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
3	10152262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.350877
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
3	10152314	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.183333
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
3	10152557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.241379
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.515152
3	10152573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
3	10152592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.378378
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.297297
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.387097
3	10152658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0882353
3	10152659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.290323
3	10152689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	10152692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
3	10152704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	10152721	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10152737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
3	10152742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
3	10152751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
3	10152752	A->G	+	.	.	.	Intergenic	.	.	Alu	1
3	10152764	A->G	+	.	.	.	Intergenic	.	.	Alu	0.411765
3	10152866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.484848
3	10152887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.529412
3	10152910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
3	10152933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
3	10152941	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	10152957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.219512
3	10152965	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
3	10152966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
3	10152967	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
3	10152993	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	10153013	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
3	10153022	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	10153044	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
3	10153060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
3	10153069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	10153126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.193548
3	10153128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
3	10153131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121951
3	10153167	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
3	10153198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.204545
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.276596
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.113636
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
3	10153266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
3	10153298	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0638298
3	10153299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.097561
3	10153300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.097561
3	10153301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121951
3	10153349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
3	10153350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.28
3	10153379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
3	10153381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	10153409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.481481
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0882353
5	10368355	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
5	10368375	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.2
5	10368423	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.235294
5	10368447	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.1
5	10368557	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.25
5	10368563	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.357143
5	10368673	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.363636
5	10368782	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.285714
5	10368794	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.153846
19	10930619	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.333333
19	10930632	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.166667
19	10930851	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.181818
19	10930855	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.272727
19	10932938	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.545455
19	10933016	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.3
19	10933055	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.230769
19	10933125	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.181818
1	11020816	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.142857
19	11450009	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.466667
19	11450010	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.4375
19	11450020	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.266667
19	11450051	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	1
19	11450055	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.153846
19	11450083	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.272727
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.769231
19	11450427	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.230769
16	11575954	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.272727
12	11660409	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11660468	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.214286
12	11660478	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11660479	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.266667
12	11716210	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.166667
18	12850240	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.285714
18	12850407	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.272727
19	12941216	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.1875
Y	13385830	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.142857
Y	13396031	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.25
11	13703789	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.181818
11	13703915	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.181818
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.357143
11	13703994	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.181818
1	13755823	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.230769
1	13755996	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.307692
1	13755997	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.357143
19	13837503	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0547945
19	13837517	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0238095
19	13837543	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0294118
19	13837703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0241935
19	13837884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.02
19	13837899	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0208333
19	13837902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
19	13837925	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
19	13837926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0337079
19	13838020	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
19	13838025	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0322581
19	13838055	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
19	13838060	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0441176
19	13838061	A->G	-	.	.	.	Intergenic	.	.	Alu	0.03125
19	13838083	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0595238
19	13838119	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0422535
19	13838120	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0212766
19	13838162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.121622
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.20915
19	13838188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.114286
19	13838197	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0322581
19	13838286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
19	13838291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0729927
19	13838300	A->G	-	.	.	.	Intergenic	.	.	Alu	0.02
19	13838303	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0258065
19	13838304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0387097
19	13838380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.514085
19	13838386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0774648
19	13838453	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0241935
19	13838492	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0258621
6	14121360	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.463158
6	14121375	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0288462
6	14121399	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0789474
6	14121438	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.259259
6	14121439	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.132075
6	14121445	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0380952
6	14121525	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.030303
6	14121565	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0535714
6	14121570	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0555556
10	14595522	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.294118
10	14906966	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.142857
21	14980391	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.117647
21	14980433	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.1875
6	15254801	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.12
6	15254830	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0666667
6	15254853	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0857143
6	15254854	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.210526
6	15254862	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15254895	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0535714
6	15254921	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.121212
6	15254922	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15254931	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.147059
6	15270820	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.333333
6	15270821	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15270873	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.222222
6	15298515	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
16	15700515	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.2
16	15700569	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.1
16	15700581	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.15
16	15700607	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.416667
16	15701178	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.6
16	15701182	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.7
16	15701186	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.9
16	15701187	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.8
19	16080741	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0555556
19	16080753	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16082839	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.125
19	16082907	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16083257	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.3
19	16083258	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.227273
19	16083317	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16083323	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16083395	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.09375
19	16083396	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0625
19	16084068	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.125
19	16085168	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16085194	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16085208	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.52381
19	16085318	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0689655
17	16383008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	16383275	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
17	16383291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
17	16383879	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
17	16383882	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
17	16383909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
19	16637271	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16637429	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.4
19	16637449	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
11	16740502	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.272727
11	16740578	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.2
11	16740696	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.166667
11	16756395	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.357143
11	16756409	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.315789
11	16756435	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.105263
11	16756436	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.363636
11	16756451	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.391304
11	16756476	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.782609
11	16756530	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.346154
11	16756531	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.692308
11	16756647	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.55
11	16756654	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.181818
11	16756722	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.444444
11	16756723	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.722222
11	17076686	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.277778
19	17103807	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.235294
19	17105227	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17105232	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.176471
19	17105253	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	17105384	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
10	17217058	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.210526
10	17217365	A->G	+	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.0769231
6	17645372	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.181818
6	17645386	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.214286
10	17687219	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.807692
10	17687220	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.75
10	17687296	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.578947
10	17687313	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.208333
10	17687315	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.08
10	17687316	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.12
10	17687322	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.24
10	17687324	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.12
10	17687336	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.181818
10	17687354	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.130435
10	17687378	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.8
10	17687380	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0740741
10	17687404	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.194444
10	17687471	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0655738
19	18276129	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
11	18333720	A->G	+	ENSG00000110768	GTF2H1	protein_coding	Intergenic	.	.	Alu	0.0714286
11	18520773	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.166667
11	18520782	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.333333
11	18520868	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.2
19	18908211	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.181818
19	18908318	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.333333
19	18908319	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	18908327	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.416667
19	18908365	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.230769
19	18909586	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.157895
19	18909595	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.210526
19	18909604	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.111111
19	18909616	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.333333
9	19306923	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.5
9	19307169	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.2
9	19307288	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.181818
1	19364879	A->G	-	ENSG00000077549	CAPZB	protein_coding	Intergenic	.	.	Alu	0.166667
13	19714558	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0645161
13	19714580	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0769231
13	19714635	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	19714691	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	19714741	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.105263
2	20292491	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.15
2	20292527	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20292578	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20292589	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.368421
2	20292875	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.235294
2	20292880	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20345135	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.416667
1	20755311	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.318182
1	20755406	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	20755463	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.15
1	20755465	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.421053
1	20755466	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.263158
1	20755488	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.176471
1	20755489	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.235294
1	20755569	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.357143
1	20756758	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.666667
1	20756783	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.5
1	20756784	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.111111
1	20756812	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20756818	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.15
1	20756847	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.5
1	20756864	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.15
1	20756912	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.409091
1	20756913	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	20756977	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	20756982	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	20756983	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
16	21424655	A->G	-	ENSG00000169246	NPIPB3	protein_coding	Intergenic	.	.	Alu	0.363636
13	21442698	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.25
16	21518121	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0952381
16	21518151	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
19	21760895	A->G	-	ENSG00000197020	ZNF100	protein_coding	Intergenic	.	.	Alu	0.25
14	22916154	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.25
14	22916164	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.133333
14	22916354	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.1
14	22916408	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.266667
14	22917006	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.3
14	23074048	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.363636
1	23333944	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.363636
2	23781537	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.363636
3	23832959	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.217391
3	23848283	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23848308	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23848349	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.307692
3	23848350	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.230769
X	24076350	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.25
X	24078074	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0306122
14	24170152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
14	24170153	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
14	24171039	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
14	24171040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
14	24171058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
14	24171078	A->G	+	.	.	.	Intergenic	.	.	Alu	0.352941
2	24347960	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.4
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.181818
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.192308
22	24573192	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0740741
22	24573655	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.157895
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.1
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.263158
22	24573702	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.125
22	24573723	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.105263
22	24573724	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.105263
22	24573725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.105263
22	24573726	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.1
22	24573734	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0952381
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.625
22	24574608	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.181818
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.538462
22	24574646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.133333
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.333333
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.153846
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.285714
22	24574707	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.384615
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.583333
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.105263
6	24710363	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0416667
13	25306284	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.166667
13	25306373	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.133333
15	25431405	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.153846
15	25431570	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.153846
15	25431615	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.2
15	25433348	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.105263
15	25433358	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.235294
15	25433391	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.117647
15	25433467	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.117647
1	25456173	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.5
10	26443784	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.333333
10	26773350	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	26773377	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.307692
10	26773378	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.153846
10	27125779	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.153846
13	27256919	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
13	27652613	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.2
13	27652616	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.25
13	27652621	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.461538
13	27653168	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.733333
1	27878003	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1875
1	27878007	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1875
1	27878029	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1875
1	27878030	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.3125
1	27878043	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27878065	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27880448	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.135135
1	27880460	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0731707
1	27880598	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0972222
1	27880607	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.597015
1	27881401	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.243243
1	27881433	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	27881434	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.375
1	27881707	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27881708	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.222222
13	28146848	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28188543	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.363636
13	28189461	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28189471	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.545455
13	28189501	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28189525	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.363636
13	28190528	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28194036	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.454545
13	28194037	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.636364
13	28194077	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28194078	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
10	28525594	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.129032
10	28525595	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.548387
10	28525616	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.151515
10	28525686	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.534884
10	28525726	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.62
10	28525729	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.212766
10	28525734	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0338983
10	28525735	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0363636
10	28525763	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.545455
10	28538404	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0909091
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.227273
10	28538417	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.142857
10	28538426	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0833333
10	28538435	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.08
10	28538461	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0869565
10	28538462	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.136364
10	28538468	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.111111
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.277778
10	28538474	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0952381
10	28538497	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.111111
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0967742
10	28539638	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.156863
10	28539639	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.117647
10	28539659	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0638298
10	28539684	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0434783
10	28539688	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.139535
10	28539742	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.105263
10	28539759	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.125
10	28539760	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.1875
17	28667250	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.6
17	28667256	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.307692
17	28722100	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.166667
17	28722308	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.133333
17	28722353	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.230769
2	28784773	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.185185
2	28784809	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0571429
2	28784875	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0769231
2	28786170	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28786188	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28786214	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.181818
2	28786252	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28786654	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.25
2	28788932	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.319149
2	28788938	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.24
2	28788957	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0625
2	28790159	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.107143
16	28831469	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.26087
16	29119657	A->G	+	ENSG00000284649	AC009093.8	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
22	29287369	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	29584118	A->G	-	ENSG00000139514	SLC7A1	protein_coding	Intergenic	.	.	Alu	0.4
6	30492025	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0406977
6	30492040	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0242718
6	30492063	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0466102
6	30492075	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0245902
1	30948047	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.25
1	30948052	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
1	31025619	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.263158
1	31025667	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.5
16	31121174	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0576923
16	31121246	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0377358
16	31121250	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.047619
16	31121254	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.145161
16	31121266	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0638298
16	31121852	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.137931
16	31121855	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0882353
16	31121856	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0588235
16	31121881	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.178571
16	31121897	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.15625
16	31121965	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0638298
16	31121971	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0454545
16	31121986	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0425532
16	31122003	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.282051
16	31122025	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0714286
16	31122624	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.5
16	31122625	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.428571
16	31122646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.285714
16	31122692	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.111111
16	31122694	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.222222
16	31122723	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.185185
16	31122734	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.32
16	31122754	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.285714
16	31122760	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.608696
16	31122766	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.12
16	31122801	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.157895
16	31122802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.263158
16	31122844	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.142857
16	31122867	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.117647
16	31122926	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.272727
16	31122927	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31122933	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31122966	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.533333
16	31122967	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31123286	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.304348
16	31123310	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31123317	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.166667
16	31123342	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.235294
16	31123343	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.157895
16	31123356	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.272727
16	31123382	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.666667
16	31123383	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0909091
16	31123391	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31123397	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.173913
16	31123406	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.263158
16	31123443	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.4375
16	31123470	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.333333
16	31123471	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.545455
16	31123483	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.3125
16	31123526	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.176471
16	31123530	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.5
16	31123632	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0869565
16	31123633	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0869565
16	31123641	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.263158
16	31123646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.166667
14	31137193	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.181818
14	31137198	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.272727
16	31358557	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.23913
16	31456272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	31922752	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.230769
18	32121410	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.272727
5	32164996	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.181818
5	32165002	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.142857
5	32165048	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.142857
5	32165120	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.6
2	32507309	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.130435
2	32520756	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.4
9	33027729	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	33038085	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	33038108	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.153846
6	33307469	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.2
21	33404873	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0454545
21	33405012	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.166667
21	33405973	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.148936
21	33405979	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0612245
21	33405986	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0851064
9	33831180	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.230769
9	34193078	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.230769
9	34206460	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.1
21	34853945	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.230769
5	34953348	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.153846
9	35047959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
22	35266801	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.166667
20	35727865	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.130435
20	35775950	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.142857
20	35775977	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.272727
1	36476768	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0555556
1	36476916	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.133333
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.133333
21	37372327	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.08
21	37411233	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.25
21	37411297	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.363636
21	37427130	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.666667
21	37427131	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.5
21	37427241	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.375
21	37427245	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.75
21	37427386	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0606061
9	37507690	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	37870178	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.307692
6	37870188	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.1875
6	37870732	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.6
6	37874395	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.153846
8	37893171	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.333333
8	37893172	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.25
8	37893212	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.2
8	37893213	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.2
8	37893668	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.583333
8	37893728	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.4
6	37976463	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.363636
8	38219720	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
8	38219751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38219756	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
8	38219760	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
20	38817480	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0714286
20	38817950	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.1
20	38818026	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0740741
20	38818985	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.047619
19	38844946	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.181818
19	38845175	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.230769
2	39054208	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.117647
2	39097643	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.3
14	39178439	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.133333
1	40377053	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0666667
1	40377229	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	40378210	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.176471
22	40955334	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.214286
13	40997325	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.25
13	40997355	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40997369	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
13	40997386	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0740741
13	40997425	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.09375
13	40997428	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0625
13	40997429	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1
13	40997485	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	40997625	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.136364
13	40997664	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.133333
13	41011681	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0289855
13	41011690	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0294118
13	41011694	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0535714
13	41011717	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0333333
20	41040659	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.173913
20	41040718	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0540541
20	41040721	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.114286
20	41041216	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0588235
20	41041290	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0731707
20	41041323	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.047619
20	41041356	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0588235
20	41041365	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0612245
20	41041995	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.04
20	41042009	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.06
20	41042013	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0434783
20	41042050	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.137255
20	41042054	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0612245
20	41042090	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.119048
20	41042145	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0416667
20	41044860	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0789474
13	41057645	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
8	41603362	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.125
8	41603365	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.117647
8	41603389	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.142857
15	42238216	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.4
15	42238217	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.3
15	42238323	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.166667
12	42359932	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.2
12	42359981	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.181818
12	42359997	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.272727
6	42940301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
6	42940304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
6	42940305	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121951
6	42941455	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.05
6	42941505	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	42941508	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.178571
6	42941682	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.384615
6	42941842	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.277778
6	42941860	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.333333
6	42941899	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42941906	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.222222
6	42941916	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.333333
6	42942033	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.185185
6	42942079	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.222222
6	42942192	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.2
6	42942216	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.125
6	42942223	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.333333
6	42942231	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42942320	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42942345	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.142857
6	42942346	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.454545
6	42942350	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.333333
6	42942373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.208333
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.766667
6	42942472	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1875
6	42942480	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.933333
6	42942481	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.866667
6	42943148	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.272727
6	42943154	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42943158	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.25
6	42943175	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0869565
6	42943193	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	42943221	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.117647
6	42943240	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.139535
6	42943241	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.097561
6	42943257	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0625
6	42943351	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.129032
5	42993037	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0512821
22	43010598	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.4
6	43029649	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.2
5	43129038	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
10	43140125	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.111111
10	43141124	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.272727
19	43659412	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0689655
1	43676232	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.272727
2	44223079	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.3
2	44223084	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.166667
20	44515851	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.166667
7	44830899	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0350877
7	44830948	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0298507
7	44832684	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0277778
7	44832692	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0769231
7	44832701	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.421053
7	44832704	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.171053
7	44832727	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.03125
7	44832756	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0416667
7	44832775	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.097561
7	44832777	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0769231
7	44832820	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.444444
7	44832828	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.16129
7	44832838	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.107143
7	44832855	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.107143
7	44832864	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44832867	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.115385
7	44832874	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.380952
7	44832881	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.08
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.16
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.173913
7	44832917	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0869565
7	44833102	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0535714
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44833133	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.14
7	44833140	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.122449
7	44833145	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0576923
7	44833222	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0333333
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.254902
7	44833263	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0869565
7	44833264	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0408163
7	44833300	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0967742
7	44833305	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.171429
7	44833330	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.125
7	44833371	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.636364
7	44833397	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.3
7	44833404	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.4
7	44833453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.32
7	44833460	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.208333
7	44833499	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0857143
7	44833507	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.558824
7	44833508	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.147059
7	44833578	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.176471
7	44833590	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0606061
7	44833617	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0540541
7	44834921	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.153846
X	44893107	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.181818
X	44893109	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.181818
X	44893116	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.333333
19	45012534	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45013361	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45013712	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.230769
19	45013738	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45013747	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45013764	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45015501	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.25
19	45030033	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.363636
14	45208533	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.4
17	45467226	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	1
12	45953484	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.125
22	46733487	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.3
22	46733488	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.3
22	46733489	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.363636
X	47152092	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.0666667
11	47170107	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.214286
11	47367882	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.307692
11	47367896	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.4
11	47367960	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47367981	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.5
11	47368253	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.75
11	47368256	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.1875
11	47368343	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480198	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.125
17	47488786	A->G	-	ENSG00000228782	MRPL45P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
17	47488813	A->G	-	ENSG00000228782	MRPL45P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
11	47765936	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.111111
11	47765942	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.176471
2	47896427	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.153846
19	48328940	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.142857
19	48328957	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.133333
19	48329077	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0909091
10	48356584	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.142857
10	48356586	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.142857
10	48356640	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.166667
3	48699151	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.333333
3	48699207	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.272727
3	48936478	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.153846
3	48936500	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.0882353
3	48936505	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.205882
3	48936547	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.0571429
13	48991522	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.0689655
13	48991608	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.0909091
13	48991675	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.103448
18	49389787	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.545455
14	49584079	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.230769
3	50038646	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.181818
13	50065553	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.454545
13	50065564	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.272727
13	50065569	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.181818
3	50099148	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.272727
3	50111438	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.230769
3	50111451	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.210526
3	50111477	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.125
3	50111481	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50111523	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0833333
3	50111542	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0909091
3	50111642	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.111111
3	50112337	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.214286
3	50112360	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.307692
13	50118674	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.230769
14	50197827	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
15	50345823	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.25
5	50413652	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.285714
5	50413659	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.230769
15	50494795	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.166667
22	50539964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0470588
22	50539966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0289017
22	50540019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0679612
14	50803964	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.25
14	50803965	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.25
14	50803988	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.166667
20	50922822	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.181818
17	50992040	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	50996948	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	50996957	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.25
17	50997057	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.133333
17	51027214	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.363636
17	51027215	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.0909091
17	51027229	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.333333
17	51027264	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.136364
17	51027266	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.136364
17	51027320	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.1875
17	51027349	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
19	52194034	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.181818
15	52563004	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.142857
13	52629816	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
8	52698228	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	52698514	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.153846
8	52698899	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.272727
8	52698928	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
8	52701328	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.142857
8	52706796	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.357143
8	52706799	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.571429
8	52706855	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.142857
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.75
8	52706889	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.266667
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.315789
19	52926557	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.25
19	52926991	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.166667
3	53307015	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.2
3	53308373	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.0909091
6	53320152	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.111111
6	53323776	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.153846
4	53419534	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.272727
4	53419541	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.2
4	53419606	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.4
2	53929443	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.142857
2	53965489	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53965497	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.181818
8	53993200	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.166667
8	54081585	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.111111
19	54202926	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0377358
19	54202950	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0508475
19	54203577	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.047619
19	54203648	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0512821
19	54204125	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0625
19	54205886	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0512821
19	54205916	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0545455
19	54205934	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.04
19	54205998	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.075
19	54237247	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.2
X	54562252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54562255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
X	54562654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.466667
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
X	54563528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
X	54563711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
X	54563731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
X	54564488	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
X	54564507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
X	54564508	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
X	54564547	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54564582	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54564588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
X	54564617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	54564658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	54564814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54564833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	54564834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
X	54564864	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54564914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
X	54566813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	54566886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
19	54891536	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
19	54891602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
2	54979163	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.157895
14	55055845	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0740741
14	55058757	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.272727
14	55059376	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.142857
14	55059377	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.2
14	55278711	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.111111
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.15
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.238095
14	55278828	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55278870	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
14	55278877	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.5
14	55279055	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.6
14	55279137	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0666667
14	55279140	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.263158
14	55279206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.421053
14	55279207	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.117647
14	55281120	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55281133	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.5
14	55285136	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.12
14	55285154	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0869565
14	55285159	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.130435
14	55285221	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55290272	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.214286
12	55787645	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.333333
12	55787678	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
8	55889149	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55889423	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55889437	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55889438	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55889498	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0666667
8	55890004	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55890005	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.210526
8	55890019	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55890048	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0833333
8	55890218	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.111111
8	55890237	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55890802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.5
8	55890840	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.28
8	55890857	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.12
8	55890867	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.409091
8	55891157	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55891167	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55891177	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55891182	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.129032
8	55891231	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.225806
8	55891232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.612903
8	55891258	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55891273	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0967742
8	55891341	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55895557	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0740741
8	55896127	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.238095
8	55896211	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55896219	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0571429
8	55896257	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0526316
8	55896819	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.16
8	55896881	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0857143
8	55905281	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55906518	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0666667
8	55906537	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.347826
8	55906540	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.235294
8	55906554	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55906691	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55906694	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.230769
8	55906695	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55917001	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.137931
8	55917030	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.185185
8	55917053	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55917056	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55917057	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.263158
8	55917098	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.481481
8	55917131	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55917260	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.08
8	55917279	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55917311	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0625
8	55917325	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.114286
8	55917333	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.515152
8	55917347	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0882353
8	55917357	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55917384	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.236842
8	55922519	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.583333
8	55922520	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.272727
8	55922559	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.466667
8	55922567	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55922572	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55922687	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55922717	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.363636
8	56003458	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	56003479	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	56003505	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.4
8	56072427	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.153846
18	56607044	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.153846
18	56607058	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.214286
12	56609012	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.25
3	57591605	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.357143
3	57591666	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.153846
17	58340895	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
14	58363535	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	58930252	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
14	60256339	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0869565
14	60256382	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.26087
2	60904281	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.36
2	60904492	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.222222
2	60904703	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0689655
2	60909780	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0921053
11	61364814	A->G	+	ENSG00000149483	TMEM138	protein_coding	Intergenic	.	.	Alu	0.3
5	61378685	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.272727
5	61379106	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.333333
5	61379113	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.111111
14	61742631	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.181818
14	61742700	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.3
14	61742806	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.222222
14	61743152	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0652174
14	61743172	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0465116
14	61743177	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0930233
14	61743189	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0555556
14	61743254	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0833333
17	61998738	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
12	62330442	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0714286
12	62331907	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.178571
12	62331931	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.129032
12	62332043	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.133333
12	62333318	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.470588
12	62333384	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.214286
12	62333544	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0740741
1	62449049	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.4
1	62449081	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.25
17	62476461	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62476471	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.4
17	62476483	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62476822	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.235294
17	62476837	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.3125
17	62476847	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.357143
17	62589887	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.666667
17	62589946	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.227273
17	62590371	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.9375
17	62590664	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.36
17	62590668	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.12
17	62590731	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.405405
17	62590980	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.272727
17	62590990	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.3
17	62591129	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.08
17	62591145	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62591151	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	62591198	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.1875
17	62591206	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.08
11	62840792	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.15
11	62840941	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.15
11	62841013	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.333333
8	63196307	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.333333
10	63249696	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	63249712	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63250244	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.363636
10	63250276	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	63255031	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.1
15	63545701	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.285714
15	63548230	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.357143
15	63675996	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.363636
15	63676001	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.272727
15	63676097	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63676098	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63693346	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63693412	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.105263
15	63693432	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.125
15	63693510	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.357143
15	63693511	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.285714
15	63693522	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.266667
17	64128031	A->G	-	ENSG00000178607	ERN1	protein_coding	Intergenic	.	.	Alu	0.1875
12	64463312	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.333333
11	64858319	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.153846
11	64858320	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.166667
11	64858401	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.166667
11	64858462	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.428571
11	64858483	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.190476
1	64940413	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.153846
1	64940477	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.333333
1	64940481	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.230769
1	64940505	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.133333
1	64940590	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.142857
1	64940930	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.428571
17	65016599	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0869565
2	65125932	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65125934	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.272727
2	65125937	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65127487	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65127604	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.266667
2	65127643	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.416667
2	65127831	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65127866	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.285714
2	65127872	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.368421
2	65127929	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.3
2	65427147	A->G	-	ENSG00000198369	SPRED2	protein_coding	Intergenic	.	.	Alu	0.153846
2	65427210	A->G	-	ENSG00000198369	SPRED2	protein_coding	Intergenic	.	.	Alu	0.3
15	65698957	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65736356	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
11	65774442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0632911
11	65774466	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0263158
11	65774508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0724638
11	65774544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0434783
11	65774549	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0465116
11	65774681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.075
11	65774682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.075
15	65774964	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.214286
7	65981118	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.08
12	66193998	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0350877
12	66194002	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0909091
12	66194007	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0909091
12	66194056	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.107143
12	66194058	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0892857
12	66202503	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0689655
11	66649517	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
7	66685422	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0895522
7	66741883	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3125
7	66741903	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66741908	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66742630	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66742740	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.192308
7	66742741	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66742791	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.09375
7	66742792	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0625
7	66742881	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0645161
7	66743054	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66743146	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66743157	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66743161	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66743196	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66743200	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.363636
7	66743213	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66743271	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66745711	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
1	66936297	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.6
1	66936495	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.214286
1	66936501	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.461538
1	66936507	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.181818
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.142857
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.272727
1	66937331	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.166667
1	66937377	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
17	67353404	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.7
17	67353432	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.666667
17	67353468	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.4
17	67354943	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.363636
17	67354946	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67355265	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
16	67591102	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.133333
10	67890845	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.272727
15	68118577	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
17	68126036	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
17	68126096	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0576923
17	68126186	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.131579
11	68485936	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.727273
11	68485937	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.7
12	68613100	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0285714
12	68613151	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0416667
12	68637401	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68637454	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68637466	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68637476	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68637587	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
10	69095169	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0689655
10	69095193	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0235294
16	69598319	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
2	69928685	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0408163
2	69928790	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0348837
12	70283374	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.1875
12	70283447	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.3125
9	70304163	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0952381
14	70923969	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.181818
14	70924006	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.133333
14	70924078	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.117647
14	70924098	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.285714
14	70924111	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.181818
14	71440106	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.545455
14	71440498	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.125
14	71440528	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.307692
14	71440563	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.2
14	71480712	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.166667
12	71658413	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	71658426	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.129032
12	71658445	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0571429
12	71658468	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0789474
12	71658508	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.2
12	71661642	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0740741
12	71661650	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0714286
12	71661685	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.172414
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.333333
12	71661747	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0810811
3	72416072	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0625
3	72416091	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.266667
3	72416140	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0625
3	72416166	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.36
3	72416692	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.153846
3	72416696	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0526316
3	72416710	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0689655
15	72505853	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.105263
15	72575032	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72763250	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.25
15	72763280	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.153846
15	72763419	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.230769
15	72779446	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.444444
7	72995656	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	72995704	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	72995721	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
7	72995872	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.833333
7	72995873	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
3	73053655	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.2
9	73154677	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0392157
9	73157385	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0612245
9	73157434	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0789474
9	73157454	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0810811
9	73157463	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.111111
9	73157489	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0689655
9	73157534	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.1875
4	73241030	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.214286
4	73241035	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.214286
7	73461839	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.769231
7	73461844	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.266667
7	73461860	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.227273
7	73461910	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.153846
7	73461916	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.25
7	73461917	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.583333
7	73461918	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.166667
7	73461962	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.210526
7	73461963	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.277778
7	73462018	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.166667
7	73462034	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.642857
7	73462039	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.4
6	73513847	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
6	73513848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
6	73513849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.162162
6	73513909	A->G	-	.	.	.	Intergenic	.	.	Alu	0.296296
6	73513929	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
6	73513943	A->G	-	.	.	.	Intergenic	.	.	Alu	0.128205
6	73513970	A->G	-	.	.	.	Intergenic	.	.	Alu	0.395349
6	73513976	A->G	-	.	.	.	Intergenic	.	.	Alu	0.595238
6	73513980	A->G	-	.	.	.	Intergenic	.	.	Alu	0.533333
6	73514135	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
6	73514276	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
6	73514301	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
6	73514305	A->G	-	.	.	.	Intergenic	.	.	Alu	0.368421
6	73514311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
6	73514337	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	73514343	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
6	73514350	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	73514443	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
6	73514451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	73514497	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0363636
6	73514594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.257143
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.289474
6	73514607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.075
6	73514814	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0545455
6	73514822	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
6	73514842	A->G	-	.	.	.	Intergenic	.	.	Alu	0.104167
6	73514875	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
6	73514880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.278689
6	73514919	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0576923
10	73776962	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.181818
10	73777632	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.166667
10	73777654	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.153846
10	73777655	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.153846
10	73777694	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.181818
10	73777939	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.4
10	73777964	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.307692
10	73778138	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.615385
X	74574191	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
15	74578747	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.2
15	74578822	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.214286
X	74580852	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
16	75029988	A->G	+	ENSG00000186187	ZNRF1	protein_coding	Intergenic	.	.	Alu	0.2
15	75378517	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.2
15	75379170	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.3
16	75650772	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.125
4	75916917	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.0833333
9	77975660	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
11	78331384	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0666667
11	78389515	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	78396776	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.142857
15	78888310	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0645161
15	78888315	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.137931
15	78888316	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0714286
15	78898235	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
15	78898243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.478873
15	78898244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.242857
15	78898312	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0206186
15	78898313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0918367
15	78898315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.393939
15	78898323	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0641026
15	78898337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
15	78898339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0808081
15	78898343	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0520833
15	78898352	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0989011
15	78898378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0631579
15	78898379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0531915
15	78898411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0319149
15	78898419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0744681
15	78898420	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
15	78898431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
15	78898448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114583
15	78898489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.075
15	78899058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0324324
15	78899115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
15	78899260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.275168
15	78899273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0538462
15	78899285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0551724
15	78899297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15493
15	78899321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
15	78899322	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0212766
15	78899331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.242857
15	78899337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0970149
15	78899362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
15	78899416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.203125
15	78899417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.292308
15	78899429	A->G	+	.	.	.	Intergenic	.	.	Alu	0.188406
15	78899431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.318841
15	78899435	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
15	78899500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	78899549	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0772727
15	80066688	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80066701	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.125
2	85043740	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	85609845	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.2
2	85609953	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.25
6	85633747	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.105263
6	85633760	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.15
6	85633895	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0833333
6	85633903	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0952381
11	85955058	A->G	-	.	.	.	Intergenic	.	.	Alu	0.538462
11	85955060	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
11	86049679	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.333333
6	87249810	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87249849	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87249890	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.5
6	87250349	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.4
9	87501265	A->G	+	ENSG00000196730	DAPK1	protein_coding	Intergenic	.	.	Alu	0.181818
10	87908613	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.166667
10	87908617	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.272727
2	88608960	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.133333
2	88608989	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.25
1	88884192	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.166667
15	89094633	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.0909091
15	89094967	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.142857
16	89405402	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.214286
1	89642647	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.176471
1	89643293	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.16
16	89886790	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.2
16	89886849	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.272727
16	89886858	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.8
16	89887133	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.695652
7	90626682	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.142857
7	90626707	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.1
7	90626819	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.190476
5	91308858	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0394737
7	92711764	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.166667
7	92811896	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.117647
15	92889408	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.125
15	92890756	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0816327
15	92890816	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0571429
15	92894069	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	92908850	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	92908863	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	92908864	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.111111
1	93155118	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.133333
1	93155737	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.333333
1	93155751	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.0909091
12	96327710	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
1	96798220	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.2
10	97376485	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.333333
10	97376486	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.3
8	97729031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
8	97729154	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
8	97729162	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
8	97729166	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
8	97729189	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
8	97729201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.119048
9	97921696	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.142857
8	98043676	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.117647
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.5
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.611111
12	98596782	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.208333
12	98596830	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0769231
12	98596859	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0731707
12	98596868	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0666667
12	98596874	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.428571
12	98596898	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.211538
12	98597476	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.136364
12	98597518	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0655738
12	98597563	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.111111
5	98861650	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.12
5	98918186	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.333333
13	99318237	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.833333
13	99318245	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.272727
13	99318307	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.357143
13	99318309	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.2
13	99318642	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.2
13	99318700	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.133333
13	99318706	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.1875
13	99318710	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.6
13	99318767	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.153846
6	99405689	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.363636
6	99405719	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.307692
7	99497307	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.352941
7	99497313	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.647059
7	99497385	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.727273
7	99497452	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.181818
3	100287986	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.1
3	100288134	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.272727
3	100288138	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.166667
3	100288160	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.294118
3	100288209	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.166667
1	100410154	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.166667
12	100627457	A->G	+	ENSG00000139354	GAS2L3	protein_coding	Intergenic	.	.	Alu	0.176471
12	100627460	A->G	+	ENSG00000139354	GAS2L3	protein_coding	Intergenic	.	.	Alu	0.176471
8	100716315	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	100716318	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0340909
2	101274883	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0645161
2	101274898	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.102273
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.111111
2	101274925	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.11236
2	101275053	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0454545
2	101275059	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0793651
2	101275062	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0634921
2	101275066	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.2
2	101275068	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0338983
2	101275076	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0789474
2	101275090	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0769231
2	101275229	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0784314
2	101275256	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.132075
2	101275285	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0384615
2	101288457	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0952381
12	101827881	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.142857
12	101901759	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.0588235
4	102338391	A->G	-	ENSG00000138821	SLC39A8	protein_coding	Intergenic	.	.	Alu	0.0833333
14	102347987	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.363636
8	102358995	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.181818
4	102558720	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.26
4	102558777	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0517241
4	102559818	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.2
4	102559832	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	102559883	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0408163
14	102843718	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.25
10	103143868	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.235294
10	103143872	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103178322	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103178379	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103179219	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
12	103936432	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.185185
12	103936540	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.157895
12	104460457	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0833333
12	104462082	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0571429
12	104462087	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0571429
12	104480457	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104480497	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104559479	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104559487	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104559488	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.266667
12	104559527	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104559528	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.4375
12	104686106	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
7	104945840	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0923077
7	104946021	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0797546
7	104946092	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0426829
7	105023249	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0869565
7	105023255	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.217391
7	105023282	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.25
7	105023334	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0952381
7	105023515	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.111111
7	105023544	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.148148
7	105023574	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.115385
7	105023610	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0689655
7	105070514	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0909091
7	107171815	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.2
7	107171845	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.166667
6	108600359	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.266667
6	108600360	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.266667
6	108600427	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.266667
6	108600496	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.133333
6	108600497	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.142857
12	108651939	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.133333
1	109063527	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.307692
1	109063534	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.405797
1	109063570	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0568182
1	109063614	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0333333
1	109063617	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0434783
1	109063618	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0659341
1	109063621	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0777778
1	109063714	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0892857
1	109063715	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.08
5	109799711	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.133333
6	110896874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110896919	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
6	110897111	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
6	110897119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
13	110897279	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0833333
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
6	110897569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
6	110897570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
6	110897573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
6	110897629	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	110897659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
6	110897679	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0416667
13	110898697	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0588235
13	110899961	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.129032
13	110899994	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.37037
13	110900007	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0377358
13	110900009	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.277778
13	110900040	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.34
13	110900044	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0930233
10	110924812	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.25
10	110924845	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.2
10	110924860	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.117647
10	110924911	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.3125
10	110924912	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.4375
10	110924920	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.214286
10	110924921	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.307692
9	112038645	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
9	112038648	A->G	-	.	.	.	Intergenic	.	.	Alu	0.75
7	112343658	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.153846
1	112623505	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.25
1	112623544	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.230769
1	112663601	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112663631	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.545455
3	113729059	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.272727
3	113729671	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.2
3	113730189	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.153846
2	113936068	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.142857
2	113936171	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.157895
2	113949122	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.105263
2	113949123	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.157895
2	113949257	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	113949284	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.142857
2	113949655	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.2
2	113949702	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.1
12	116165436	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116165531	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116165551	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.214286
12	116166181	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.173913
12	116170677	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0645161
12	116253924	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.272727
12	116253931	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116254569	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.636364
12	116254577	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.272727
12	116254674	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116254742	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.454545
11	116922582	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.307692
11	116922583	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.416667
11	116922584	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	116922979	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	116922982	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.266667
11	116923045	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	116923073	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.357143
11	116923081	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	116923098	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117063707	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117063729	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117071688	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	117076052	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117077099	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117085169	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	117085184	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117085185	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	117085264	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.235294
11	117085345	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
12	118356421	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.454545
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.454545
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.272727
12	118356438	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118356839	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0909091
12	118356840	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.318182
12	118356900	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.333333
6	119275714	A->G	-	ENSG00000111885	MAN1A1	protein_coding	Intergenic	.	.	Alu	0.105263
6	119277571	A->G	-	ENSG00000111885	MAN1A1	protein_coding	Intergenic	.	.	Alu	0.137931
10	119588426	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.133333
8	119805997	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.8125
12	120556969	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.2
12	120863734	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.454545
12	122512078	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.136364
12	122513946	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0540541
9	122817175	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.333333
12	123323390	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.363636
12	123422176	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	123422590	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.117647
12	123422608	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.133333
12	123434302	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.25
12	123434366	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
8	124492508	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	126811027	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.3
2	127334584	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.5
2	127334909	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127368884	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.5
2	127383711	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.148148
9	127790866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
9	127790891	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	127790892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
9	127790896	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
9	127790909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
9	127790931	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127791000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
9	127791029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127791033	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
9	127791038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
9	127791443	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791444	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
9	127791461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
9	127791624	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.108108
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	127791856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0882353
9	127791858	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
9	127791963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
9	127792057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
9	127792079	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	127792313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.206897
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
9	127792418	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
9	127793099	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	127793138	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	127793177	A->G	+	.	.	.	Intergenic	.	.	Alu	0.192308
9	127793178	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	127793179	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	127793213	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
9	127793964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127793977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	127793999	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
9	127794000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.35
9	127794017	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	127794029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127794989	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.3
9	127795118	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.173913
9	127795154	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.263158
9	127795180	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.190476
9	127795222	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.210526
9	127795482	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.230769
9	127795615	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.384615
9	127795621	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.153846
9	127805365	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.75
3	128732600	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.105263
3	128740287	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.25
3	128740816	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.545455
3	128744142	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128744168	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.454545
3	128744202	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.153846
8	129897984	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1875
8	129897985	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.352941
8	129898036	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.176471
8	129910746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.363636
8	129910758	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
9	129914016	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.4
9	129954805	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0857143
9	129954831	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129954925	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0652174
9	129955263	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.189189
9	129955350	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.233333
9	129955621	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.185185
8	129957061	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	129957069	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	130001640	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	130001657	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.454545
8	130001667	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.785714
8	130001746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.366667
8	130001747	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0666667
8	130001752	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	130002349	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.375
8	130002361	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.130435
8	130002379	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.666667
8	130004878	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.105263
8	130005039	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.416667
9	130705978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	131055090	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.545455
5	131159928	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.222222
5	131159990	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.5
5	131160000	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.111111
5	131319983	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.272727
5	131319986	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131319992	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.461538
5	131320203	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
9	131424625	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.166667
9	131424635	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.307692
9	131710765	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.103448
9	131710767	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.193548
9	131710781	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.0666667
9	131710806	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.166667
9	131711259	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.214286
9	131711331	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.235294
9	131711450	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.153846
9	131711535	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.5
9	131714800	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.153846
9	131719982	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	131720024	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
5	131766165	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.105263
5	131775729	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131775731	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.333333
10	131902865	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.181818
10	131902886	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.272727
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.285714
10	131903313	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.142857
10	131903382	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.272727
10	131914280	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.125
5	132917823	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0909091
5	132917845	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0625
5	132917851	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.129032
5	132917903	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.08
5	132917940	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.08
5	132942874	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.307692
5	132942899	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.294118
10	133294676	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.291667
10	133294700	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.4
10	133294732	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.3125
10	133294812	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.142857
8	133530446	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	133562338	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0588235
8	133562342	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0789474
8	133562348	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.486486
5	134381507	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.117647
9	134905713	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	135479271	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.181818
7	135479641	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.133333
7	135479653	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.166667
5	138362155	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.148148
5	138362158	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.08
5	138362159	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.12
5	138362161	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.0740741
5	138362165	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.0769231
5	138362170	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.103448
5	138362197	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.142857
5	138362249	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.105263
5	138363965	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.136364
5	138364102	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.21875
5	138364138	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.131579
5	138364153	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.05
5	138364170	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.133333
5	138364201	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.0606061
4	139046837	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0752688
4	139047243	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0583942
4	139047244	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.130435
4	139047249	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0441176
4	139047299	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0864198
4	139047312	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.091954
4	139047313	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.367816
4	139047321	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0327869
4	139047323	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139047346	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0298507
4	139047352	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.078125
4	139047378	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.269841
4	139047379	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.258065
4	139047388	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.241379
4	139047402	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.104167
4	139047411	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.1
4	139047420	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.05
4	139047489	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0789474
7	139071189	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.2
7	139080522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.132653
7	139080527	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0470588
7	139080554	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0519481
5	139284349	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.0888889
5	139284479	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.0588235
5	139284488	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.171429
5	139284494	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.216216
5	139284520	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.0967742
5	139284528	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.137931
5	139284535	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.586207
5	139284536	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.866667
5	139284540	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.241379
7	139368617	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.166667
7	139368658	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.176471
7	139368659	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.1875
7	139368663	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.176471
7	139370481	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.157895
7	139378387	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139396222	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.3
7	139396223	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.454545
7	139396392	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.1
7	139396395	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.105263
7	139396406	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.210526
7	139396418	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.176471
7	140821375	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.142857
8	141172831	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.142857
5	143048426	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.153846
5	143048461	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.285714
5	143048523	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.25
5	143048834	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.3
5	143048835	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.3
5	143048892	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.181818
5	143309170	A->G	-	ENSG00000113580	NR3C1	protein_coding	Intergenic	.	.	Alu	0.117647
6	144165375	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.181818
1	145928122	A->G	+	ENSG00000280778	AC243547.3	protein_coding	Intergenic	.	.	Alu	0.235294
1	146051723	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
5	146486983	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.3
6	149348191	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.181818
5	149499511	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.133333
6	149592915	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
1	150309014	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	150309096	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	150309097	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
1	150309441	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
1	150309507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
1	150309561	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
1	150309562	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
1	150341026	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.181818
1	150565471	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
1	150565527	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
1	150570299	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0568182
1	150570331	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.025
1	150570443	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0408163
1	150570877	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0909091
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.130435
1	150571314	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0869565
1	150571318	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0319149
1	150571325	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.204819
1	150571337	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0434783
1	150572397	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0571429
1	150572418	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0967742
1	150612087	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0244755
1	150612582	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.037037
1	150612591	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0677966
1	150612596	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0545455
1	150612617	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0416667
1	150612623	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.129707
1	150612650	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.105263
1	150612683	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0319149
1	150612688	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0561798
1	150612689	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0555556
1	150613023	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0232558
1	150613024	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0546875
1	150613029	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.110236
1	150613030	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.161538
1	150613093	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0267857
1	150613114	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0869565
1	150613122	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0206186
1	150613131	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0425532
1	150613132	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.126316
1	150613133	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0769231
1	150613178	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0538922
1	150930797	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	150930798	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.25
1	150930810	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.5
1	150930998	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.5
1	150931054	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.333333
4	151105793	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
4	151105826	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.25
4	151105969	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.111111
5	151271819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162791
5	151271828	A->G	+	.	.	.	Intergenic	.	.	Alu	0.116279
5	151271889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.193548
5	151271929	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
5	151271956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
5	151271961	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
5	151271988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
5	151271996	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	152329528	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	152329542	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0952381
7	152404886	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152404948	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.5
7	152405901	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.272727
7	152406741	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.272727
X	154088528	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.333333
1	154174655	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.153846
1	154179721	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.2
1	155558933	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.133333
1	155558956	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.142857
1	155684636	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.2
1	155684813	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.3
1	156469395	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.333333
1	156469457	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.25
1	156469471	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0952381
1	156471271	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.190476
1	156472998	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.4
7	157232530	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.142857
7	157232587	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.190476
7	157372998	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0819672
7	157373926	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.176471
7	157373953	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0952381
7	158789417	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	158789454	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.214286
7	158789459	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
7	158789478	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.12
7	158789495	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.176471
7	158792865	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
6	159685381	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.08
6	159734197	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0666667
6	159734203	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.133333
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.405405
6	159734248	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0512821
6	159734252	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0487805
6	159734602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.133333
6	159734640	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	159735628	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.451613
6	159735634	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.125
5	169805141	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.391304
5	169805164	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.238095
5	169805169	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.238095
5	169805195	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.272727
5	169925505	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.2
5	169929622	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.636364
5	169929691	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.2
5	169929692	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.2
3	169973543	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.125
3	169987374	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.166667
1	171725828	A->G	-	ENSG00000117533	VAMP4	protein_coding	Intergenic	.	.	Alu	0.142857
3	172053692	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.25
3	172053752	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.133333
2	173931548	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0566038
2	173931621	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.225
2	173932329	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.289474
2	173932340	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.05
2	173932472	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.2
2	173932482	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0779221
2	173946978	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.142857
2	173946982	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.133333
1	174003166	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
2	178435137	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.2
2	179247563	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.272727
5	179999302	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.181818
5	179999479	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.153846
5	180033102	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	180033106	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
3	182830236	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.125
3	182906544	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.25
3	182906950	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.117647
3	182907012	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.368421
3	182907013	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.105263
3	182907075	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.384615
3	182909902	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.2
3	183640824	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.230769
3	183640862	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.294118
4	184781112	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.153846
4	184781676	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0243902
4	184781677	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.178571
4	184781685	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0298507
4	184781747	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.15
4	184781748	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.183333
4	184781806	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	184781807	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.125
4	184799389	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.228571
4	184799390	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.176471
2	190885452	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.1
2	190886687	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.2
3	193629579	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.315789
3	193629606	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.5
3	193629609	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.210526
3	194649954	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.0689655
3	195417731	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.6
3	195437570	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195437571	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195439724	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.117647
3	195527232	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.3
3	196052713	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.230769
3	196052895	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.08
2	196162715	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0338983
3	196911689	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
2	197491909	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	200855388	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0338983
2	200855397	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0681818
2	200855752	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0487805
2	200856342	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0645161
2	200856343	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.16129
1	202149127	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.125
1	202149128	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.125
1	202753808	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.272727
1	202769070	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.4
1	202769071	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.5
1	202769522	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.166667
1	202769557	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.352941
1	202769586	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.181818
2	203303796	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	224516481	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
1	226000593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
1	226000766	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
1	226001346	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
1	226001375	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
1	226001408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	226001438	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
1	226001511	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
2	227539234	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.157895
2	227539282	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.1
2	227539541	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.130435
2	227539612	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.423077
2	227539684	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.2
2	227539899	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.242424
2	227539915	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.333333
2	227540016	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.285714
2	227540071	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	229831489	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.166667
2	229831545	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.25
2	229831569	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.125
2	229831587	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.3125
2	229884048	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.5
2	229884049	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.538462
2	233158848	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.272727
1	235257737	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.111111
1	235306314	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235318759	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235318772	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235318773	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.4
1	235826738	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.461538
1	235826820	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.84
1	235826842	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0606061
1	235826871	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0888889
1	235826896	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.113208
1	235826899	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.175439
1	235826915	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.25
1	235826956	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.341463
1	235826959	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.097561
1	235826962	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.142857
1	235826964	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.257143
1	235827113	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0434783
1	235827159	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.382353
1	235827161	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.757576
1	235827195	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.266667
1	235827245	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.666667
1	235827247	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.458333
1	235827269	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.538462
2	237707312	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.375
2	237707326	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.571429
2	237707358	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.181818
2	238184693	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.2
17	1585271	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intron	.	.	Alu	0.166667
1	1735226	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.15
1	1735236	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.12
19	11449896	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.166667
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.909091
19	11449919	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.08
19	11449925	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.217391
19	11449931	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.3
19	11449945	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.214286
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.821429
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.555556
19	11449984	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.222222
19	12003412	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.0869565
3	12589887	A->G	-	ENSG00000132155	RAF1	protein_coding	Intron	.	.	Alu	0.230769
3	14944591	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.1
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.75641
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.373333
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.213333
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.5
3	14944631	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0909091
3	14944643	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.097561
3	14944656	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0263158
3	14944892	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.2
3	14944945	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0740741
3	14944946	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.148148
3	14944954	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0508475
3	14944964	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0363636
1	26778140	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intron	.	.	Alu	0.2
1	26778141	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intron	.	.	Alu	0.5
1	26778185	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intron	.	.	Alu	0.181818
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0490798
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0422535
10	28523667	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.115385
10	28523689	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.12069
10	28523698	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0862069
10	28523750	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0847458
16	31123695	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.142857
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.133333
16	31123746	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.0909091
16	31123747	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.130435
16	31123773	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.166667
16	31123774	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.375
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.230769
16	31183140	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.129032
13	32525035	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.266667
20	35713269	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.266667
20	35713270	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.0344828
19	36577150	A->G	+	ENSG00000186020	ZNF529	protein_coding	Intron	.	.	Alu	0.166667
19	36577162	A->G	+	ENSG00000186020	ZNF529	protein_coding	Intron	.	.	Alu	0.2
19	38844809	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.375
19	38845288	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.3
19	39491701	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.272727
15	41298640	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0833333
15	41298647	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0612245
15	41298706	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0384615
15	41298720	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0408163
15	41298725	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0576923
15	41298764	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.05
15	41298774	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0512821
15	41298775	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.25641
15	41298780	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0789474
15	41298784	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.2
15	41298801	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0512821
15	41298807	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.121951
15	41298815	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.138889
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.219512
15	41298855	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0638298
15	41299136	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.454545
15	41299144	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	1
15	41299199	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.137931
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.516129
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.451613
15	41299237	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0625
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.393939
15	41302285	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.1
15	41302323	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0967742
15	41302363	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0588235
15	41302413	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.047619
15	41302414	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0454545
15	41302454	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0454545
15	41305325	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.117647
15	41305361	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.15
15	41305376	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.176471
15	41305379	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.466667
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.454545
15	41305458	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0606061
15	41305459	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.121212
15	41305471	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0571429
15	41308896	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.3
21	41429787	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.363636
6	42941571	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.193548
6	42941579	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.147059
6	42941602	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0714286
17	48865272	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intron	.	.	Alu	0.166667
14	49820192	A->G	-	ENSG00000165525	NEMF	protein_coding	Intron	.	.	Alu	0.181818
3	50112927	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0909091
3	50112956	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0952381
3	50112995	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0952381
14	52721545	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.384615
14	52721546	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.461538
19	52927199	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.5
19	52927245	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.230769
19	52927311	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.111111
19	52927345	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.176471
19	52927614	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.35
19	52927639	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.125
2	53870635	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.117647
19	54311235	A->G	-	ENSG00000187116	LILRA5	protein_coding	Intron	.	.	Alu	0.0235294
14	55285230	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.142857
19	57304785	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.428571
19	57304790	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.2
19	57304836	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.1875
19	57304837	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.235294
18	57641741	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.272727
14	58293911	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0350877
14	58295680	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0277778
14	58295737	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.020202
14	58295740	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0736842
14	58295747	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.113636
19	58582552	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.111111
19	58582577	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.142857
19	58584082	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.583333
19	58584089	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.5
19	58584115	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.571429
19	58584165	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.25
19	58584202	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.133333
19	58584206	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.214286
17	62004993	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.153846
17	62005012	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.285714
17	64782811	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.5
11	65180254	A->G	-	ENSG00000254614	AP003068.2	antisense	Intron	.	.	Alu	0.190476
11	65439419	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0427807
11	65439993	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0377358
11	65440001	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0362694
11	65440055	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.104712
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.38342
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.380711
11	65441385	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0360825
11	65441399	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0234742
11	65441403	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.04375
11	65441418	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0984848
11	65441426	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0882353
11	65441427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.163121
11	65441448	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.05
11	65442678	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.364532
17	67355343	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.125
17	67355371	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.105263
X	73947010	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0454545
X	73947054	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0512821
15	74026271	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.277778
15	74026751	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.0952381
15	74027327	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.136364
15	74027472	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.214286
15	74027510	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.16
15	74466041	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.153846
11	76441592	A->G	-	ENSG00000255135	AP002360.1	lincRNA	Intron	.	.	Alu	0.181818
5	78359518	A->G	-	ENSG00000245556	SCAMP1-AS1	lincRNA	Intron	.	.	Alu	0.181818
11	93734814	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0689655
11	93734902	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0645161
11	93734945	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0625
11	93734963	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0714286
11	93735426	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.190476
11	93735505	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.111111
11	93735523	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.12
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.55
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.266667
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.5
8	98043631	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0666667
8	98043657	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.142857
8	98043991	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.307692
8	98044053	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.09375
8	98044058	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.266667
8	98044059	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.115385
8	98044071	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.192308
8	98044109	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.107143
8	98044110	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.413793
12	98597599	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.0454545
12	98597604	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.162791
12	98597658	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.176471
12	98597662	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.155556
12	98597676	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.270833
14	102038074	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.133333
13	102607643	A->G	+	ENSG00000134900	TPP2	protein_coding	Intron	.	.	Alu	0.0869565
4	102810583	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.1
8	108226291	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intron	.	.	Alu	0.454545
10	112449496	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.295082
10	112449505	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.047619
10	112449506	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.031746
10	112449507	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0645161
10	112449534	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0909091
10	112449589	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.271429
10	112449595	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.126761
10	112449632	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.322034
10	112449646	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.131579
10	112449673	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0869565
10	112449674	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.125
10	112449956	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.105263
10	112449964	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.106061
10	112449999	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0895522
10	112450004	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0357143
10	112450101	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.105263
10	112450130	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0958904
10	112450131	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.038961
10	112450139	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0352941
10	112450154	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0714286
7	128529007	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.416667
7	128529017	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.166667
7	128529388	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.166667
9	129504142	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.5
9	129504148	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.222222
9	129504345	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.125
9	129504374	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.125
9	129504376	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.08
9	129504387	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0869565
9	129505980	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0727273
9	129506080	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0769231
9	129506678	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.3
9	129506681	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.15
9	129506703	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.296296
9	129506718	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.15625
9	129506758	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.113636
9	129506770	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.12
9	129506786	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.108696
5	139282849	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.977778
5	139282894	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.179487
5	139282895	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.0769231
5	139282900	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.0540541
5	139282911	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.0540541
5	139282930	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.242424
5	139282931	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.470588
5	139282948	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.0952381
4	151103663	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.116279
4	158679888	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.111111
4	158679938	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.272727
4	158680006	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.166667
1	167640611	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0952381
1	167640711	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0714286
1	167641533	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.133333
1	167641542	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.208333
1	167641598	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.136364
1	173864077	A->G	-	ENSG00000234741	GAS5	processed_transcript	Intron	.	.	Alu	0.133333
1	174016013	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intron	.	.	Alu	0.2
2	218256306	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.421053
2	233140786	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.5
2	233140808	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.416667
X	300135	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	300808	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	301090	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	301185	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	301412	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	440933	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0342052
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0682451
17	441992	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0403458
17	1572916	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0380952
17	1572929	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.106383
17	1572938	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.131868
17	1572943	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.247312
17	1573731	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.147826
1	1663568	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	1664101	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	1664121	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	1729433	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.190476
1	1729448	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.26087
1	1729449	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.217391
1	1729477	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.0869565
1	1729518	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.647059
1	1729519	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.705882
1	1729660	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.181818
1	1729665	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.25
17	2418312	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.533333
4	2839954	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.325581
4	2839964	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.145833
4	2839971	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.207547
4	2840072	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.1
4	2840074	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	2840078	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.304348
4	2840104	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2840110	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.55
4	2840114	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.454545
4	2840118	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.761905
4	2840166	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.152174
4	2840185	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0566038
X	2906205	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.25
X	2906210	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.192308
X	2906213	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.538462
X	2906270	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.315789
X	2906276	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.777778
X	2906302	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.2
X	2906305	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	2906313	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	2906314	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	2906325	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	2906336	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	2906344	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.727273
X	2906392	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
X	2906393	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.944444
X	2906414	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	2906415	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.388889
X	2906421	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.25
X	2906433	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	2906847	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	2906865	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.241379
X	2906875	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.785714
X	2906892	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	2906938	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.666667
X	2906942	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.2
X	2906944	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
X	2906947	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.954545
X	2906995	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	2907017	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	2907034	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.727273
X	2907035	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.636364
X	2907078	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
X	2907083	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
X	2907113	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0833333
4	2938358	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.875
4	2938364	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	2938371	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	2938396	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.1
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.470588
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.533333
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.714286
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.2
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	3545048	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3867545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3867578	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3869848	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3869866	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3869867	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.375
20	3869878	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3871020	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.3
20	3871115	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3871116	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3871143	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3872331	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3872353	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	3872358	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3872363	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3872377	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	3872420	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3929016	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3929019	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3929020	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3929027	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3929066	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3929073	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.4
20	3929233	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3929269	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3929282	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.26087
20	3929292	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	3929317	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.421053
20	3929377	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	3929388	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.416667
20	3929390	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	4654589	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	5909619	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	6379865	A->G	-	ENSG00000125651	GTF2F1	protein_coding	three_prime_utr	.	.	Alu	0.021978
1	6522498	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.130435
11	8686275	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.107143
11	8686287	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	8686293	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.428571
11	8686296	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.205882
11	8686348	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0535714
11	8686360	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.352941
11	8686361	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.211538
11	8686370	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	8686396	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0307692
11	8686397	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0447761
11	8686411	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0724638
11	8686414	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
11	8687224	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
11	8687235	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.434783
11	8687238	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	8687252	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.25
11	8687278	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.714286
11	8687279	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.692308
11	8687295	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.125
11	8687342	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.52
11	8687344	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.6
16	9106380	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0213675
16	9106454	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.025788
16	9106489	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0498339
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.387755
16	9106547	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0531401
16	9106548	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	9110782	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0391061
16	9110783	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.043956
16	9110891	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0277778
16	9110918	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0608108
16	9110931	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0472973
16	9110958	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0217391
16	9111026	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0496183
1	9267054	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	9267081	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	9267082	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	9268164	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	9561636	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	9561684	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	9561756	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.08
19	9561760	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.208333
19	9562243	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	9562267	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.4
19	9562305	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	9562313	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	9562431	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.2
19	9562455	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	9563675	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	9750221	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.0298507
3	10150912	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.126984
3	10150924	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.71875
3	10150933	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.366197
3	10150958	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.493333
3	10150968	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.125
3	10150973	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.060241
3	10150974	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.075
3	10151010	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	10151020	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0441176
3	10151022	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0289855
3	10151033	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.220339
3	10151036	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0638298
3	10151060	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.151515
3	10151063	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	10151069	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.344828
3	10151080	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.08
3	10151100	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	10151127	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.235294
3	10151132	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	10151141	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.129032
3	10151142	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	10151143	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	10151791	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.102941
3	10151827	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	10151831	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0285714
3	10151836	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0416667
3	10151882	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.040404
3	10151922	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0272727
3	10151940	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	10151941	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.133929
3	10151968	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0208333
3	10151981	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0649351
3	10152048	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	10152049	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	10152190	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	10457981	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10458631	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	10924467	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.075
16	10926602	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	10926621	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	10926721	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	10926724	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	10926738	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	10926741	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	10931258	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	10931866	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	11449574	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.765957
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.159091
19	11449646	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.25
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	11449669	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	11449715	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0851064
19	11449718	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	11449720	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0681818
19	11449769	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	11449778	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.12069
19	11449796	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.05
19	11449797	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0983607
19	11449862	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	11450467	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	11834868	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	11834879	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	11834919	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	11834989	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.7
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.190476
16	11835067	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	11835094	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.833333
16	11835249	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.238095
16	11835296	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.894737
16	11835320	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.277778
16	11835346	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.470588
8	11842699	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.109091
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11842709	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	11842720	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0425532
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.456522
8	11842726	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.04
8	11842733	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.08
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	11842742	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.04
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.235294
8	11842775	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.097561
8	11842801	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0697674
8	11842806	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0425532
8	11842809	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	11842812	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	11842813	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	11842814	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0888889
8	11842818	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	11842854	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.25
8	11842864	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	11843017	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11843038	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	11843046	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.24
8	11843064	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	11843086	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0487805
8	11843087	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0731707
8	11843113	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	11843128	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.259259
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.454545
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.212121
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.419355
8	11843220	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.12
8	11843228	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.222222
8	11843774	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11843814	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.545455
8	11843827	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	11843828	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.2
8	11843834	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.631579
8	11843848	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.238095
8	11843869	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	11843875	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0740741
8	11843896	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	11843910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.137931
8	11843920	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.387097
8	11843949	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.444444
8	11843964	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.152174
8	11843970	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.12766
8	11843971	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0638298
8	11843976	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.175
8	11843981	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.575758
8	11843995	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	11844000	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.170732
8	11844027	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	12663198	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	12663342	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13773060	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	13773071	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13773078	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.9
19	13773109	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	13773113	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.2
12	14498927	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	14734255	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.057971
19	14734257	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.594203
19	14734269	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	14734292	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	14734293	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.109091
19	14734297	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	14734311	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.672727
19	14734324	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.292683
19	14734349	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	14734645	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	14734646	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0727273
19	14734660	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.156863
19	14734669	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.243902
19	14734699	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.212121
19	14734700	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	14734702	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.424242
19	14734708	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	14734718	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	15072148	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.192308
3	15072149	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.115385
3	15072335	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.217391
3	15072340	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.409091
3	15072386	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.423077
3	15072979	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.206897
3	15072985	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.107143
16	15411525	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	15700166	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	15700334	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.322581
19	16155714	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	16155720	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	16155721	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	16155738	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	16550474	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	16550480	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	16550728	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	16551866	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0307692
19	16551883	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.031746
19	16551892	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
19	16551919	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
19	16552016	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0461538
19	16552534	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.057971
X	16763033	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	16764930	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	17110243	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.163636
22	17110269	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.118644
22	17110351	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0447761
22	17110377	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0857143
22	17110591	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0697674
22	17110600	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0540541
22	17110778	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0638298
17	17186661	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.5
17	17189282	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	17189293	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.125
7	17344729	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.146734
7	17344730	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.727811
7	17344734	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.157994
7	17344747	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.045403
7	17344769	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.140046
7	17344771	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.188804
7	17344810	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.105572
7	17344813	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.545265
7	17344816	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.539979
7	17344838	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.027366
7	17344890	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.472543
7	17344891	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.131657
7	17344903	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.223479
7	17345061	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0766129
7	17345062	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.184676
7	17345106	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.348802
7	17345131	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0361446
7	17345139	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0539153
7	17345150	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.253933
7	17345155	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.115551
7	17345168	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0537975
7	17345194	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.252234
7	17345204	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0235721
7	17345208	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.26366
7	17345236	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0443864
7	17345256	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.229167
7	17345258	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.254113
7	17345263	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.314423
4	17626143	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	17703075	A->G	+	ENSG00000099968	BCL2L13	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	17703076	A->G	+	ENSG00000099968	BCL2L13	protein_coding	three_prime_utr	.	.	Alu	0.5
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.3125
4	17801196	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.277778
4	17801201	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	17801204	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.470588
4	17801225	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.4
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	17801267	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	17801293	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17801306	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	17801333	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801353	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	17801356	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.217391
4	17801386	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.190476
4	17801394	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.478261
4	17801936	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	17801939	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.192308
4	17801979	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	17801981	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.193548
4	17801991	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.162162
4	17801993	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.135135
4	17801994	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.162162
4	17802039	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.411765
4	17802050	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.269231
4	17802058	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	17802076	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17803060	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0344828
4	17803097	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0444444
4	17803114	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.114286
4	17803117	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	17803224	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	17803229	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	17803297	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	18070869	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	18088511	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	18088532	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	18088572	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	18088602	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.1875
22	18088603	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	18088636	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	18088655	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.222222
22	18088665	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	18088691	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.08
22	18088708	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	18089831	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.3
22	18089867	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	18089884	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	18089909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.3125
22	18089962	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.1
22	18089963	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	18089964	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	18089976	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	18364358	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	18364359	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18364412	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	18364413	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18364467	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18364535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.347826
19	18365442	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18365443	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18365472	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18365482	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	18365515	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18365605	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18365618	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	18366519	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	18366535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	18366610	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18366876	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18366886	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	18366892	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	18366898	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	18366899	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	18367041	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18367049	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	18367091	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18367105	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	18367113	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18368075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	18368319	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
20	18487695	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.583333
20	18487707	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.454545
20	18487828	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	18487867	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	19216137	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	19216962	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.7
1	19217291	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	19217303	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.7
1	19217356	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.583333
1	19217385	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	19217400	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.25
1	19217401	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	19217405	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	19217427	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	19217437	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19217470	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	19217479	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.65
1	19259008	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19259016	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	19259060	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	19329136	A->G	+	ENSG00000040487	PQLC2	protein_coding	three_prime_utr	.	.	Alu	0.25
19	19681590	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	19681594	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	19681639	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	19681647	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.5
19	19792233	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.388889
19	19792260	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.1875
19	19792298	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.642857
10	20284282	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	20286764	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.135135
10	20286781	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0454545
10	20286805	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.122449
10	20286842	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.125
10	20286851	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
10	20286904	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.192982
19	20544006	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	20544033	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	20651958	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0319635
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.101852
1	20652097	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.027972
22	20890612	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	21184141	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	21184189	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	21184265	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21184291	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21184295	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	21184299	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	21184300	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	21185530	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21185538	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.4
19	21185564	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	21185644	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	21185663	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.571429
19	21185751	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	21291602	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21291622	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.0882353
19	21291680	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21291685	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	21291699	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21291702	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	21292055	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	21292099	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.230769
13	21374317	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.156863
13	21374321	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0338983
13	21374353	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.132743
13	21374356	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.241667
13	21374363	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.653226
13	21374430	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0265487
13	21374431	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.119658
13	21374436	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0381679
13	21374437	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.242188
13	21374438	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.322835
13	21374439	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.143939
13	21374462	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0769231
13	21374485	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.1625
13	21374486	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.158537
13	21374507	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0833333
13	21374508	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.223404
13	21374516	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.202381
13	21374877	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.15
13	21374889	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.21875
13	21374904	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0606061
13	21374908	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.171429
13	21374913	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0588235
13	21374916	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.205128
13	21374942	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0425532
13	21374945	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0206186
13	21374954	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.182609
13	21374966	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.034188
13	21374968	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.5
13	21374969	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0252101
13	21374971	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0551181
13	21375010	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.101449
13	21375012	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.172131
13	21375022	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.561404
13	21375026	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.315315
13	21375049	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0234375
13	21375052	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0650407
13	21375058	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.238938
13	21375072	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.179688
14	21460463	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.423077
14	21460473	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.85
14	21460687	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.30303
14	21460692	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.545455
14	21460742	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	21460751	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.636364
14	21460752	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.409091
14	21460781	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0666667
14	21460885	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.652174
14	21460886	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.304348
16	21640211	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.5
16	21640219	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.583333
16	22285539	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.9375
16	22285570	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.15
16	22285617	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	22285915	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	22285956	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	23465257	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.125
16	23465260	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.567568
16	23465266	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	23465858	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.351852
3	23921714	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	23921849	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	23921918	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	23922148	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	24000288	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
2	24000289	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.159091
2	24000297	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	24000319	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0652174
2	24000381	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	24000386	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	24001170	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24001264	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.4
2	24001267	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24002136	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24002584	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	24002590	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	24002593	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24002638	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.4
2	24002639	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.3
2	24002671	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	24002672	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	24002678	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	24002684	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	24077103	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0231481
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0279898
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0333333
X	24077203	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0328947
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0877743
X	24077252	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0229508
X	24077266	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0284091
22	24572562	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.1
22	24572605	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	24572667	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	26522823	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	26522966	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	26522978	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.454545
22	26522979	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	26523760	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.25
22	26523850	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.25
22	26524425	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.114286
22	26524431	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	26524445	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0625
22	26524450	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
22	26524455	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.137931
22	26524469	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.217391
22	26524476	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.5
22	26524498	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.5
22	26524505	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.2
22	26525283	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.236842
22	26525285	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.564103
12	27030260	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	27312844	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	27312856	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
1	28498819	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	28498825	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28498828	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	28498858	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	28498869	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28499622	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28499629	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	28499678	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	28499749	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28715344	A->G	+	ENSG00000162419	GMEB1	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	28965613	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.1
16	28965618	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29665079	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.103448
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.132231
16	29665119	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0229008
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0992908
16	29665148	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29665149	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0264901
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137255
16	29665184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0379747
16	29665189	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.038961
16	29665194	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0431655
16	29665216	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0245902
16	29665253	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0229885
16	29665256	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	29665299	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0943396
16	29665308	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.088
16	29665318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0373134
16	29665330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0496454
16	29665332	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0283688
16	29666251	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0273973
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0533333
16	29666269	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29666274	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0461538
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.789474
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29667545	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.28125
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	29667577	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.147059
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.323529
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.172414
16	29667611	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	29667615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.114286
16	29667617	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	29667620	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0882353
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29667661	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0816327
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.265306
16	29667697	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0576923
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.232143
16	29667758	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.139535
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.15
16	29667782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0731707
16	29667784	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	29667787	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0454545
16	29667791	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.119048
16	29667794	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0465116
16	29667796	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.05
16	29668212	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.169492
16	29668220	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0757576
16	29668229	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.126984
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.139535
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.317073
16	29668275	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.30303
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.380952
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.258065
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.258065
16	29668329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.52
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.269231
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	29668564	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.6
16	29668568	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.115385
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.458333
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.428571
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.225806
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29668913	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29668938	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.35
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.15
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.15625
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29669384	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.190476
16	29669386	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29669398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.217391
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.484848
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.909091
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.175
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.461538
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.804878
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.357143
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.119048
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.342105
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.205128
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	29670090	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29670091	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.075
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	29670103	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.393939
16	29670143	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.171429
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.115385
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0535714
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.218182
16	29670244	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0816327
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.255814
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0681818
16	29670303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29670305	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0454545
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	29670327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	29670330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.06
16	29670338	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121951
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.225
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.236842
16	29670374	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	29670395	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.103448
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29670477	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
13	30457474	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.138889
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.486486
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	30678499	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.171429
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.288889
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.361702
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.244444
8	30678893	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.05
8	30678933	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0298507
8	30678967	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0350877
8	30679027	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	30679049	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0465116
8	30679062	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0465116
8	30679066	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	30679086	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.324324
8	30679089	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	30836586	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	30836640	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.2
X	30836660	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.444444
X	30836767	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	30836791	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.384615
14	31094338	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.285714
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.05
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.15
18	32068949	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0571429
18	32068976	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0769231
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.351351
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.325
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0754717
18	32069039	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
18	32069040	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0555556
18	32069041	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.037037
18	32069054	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.12766
18	32069080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32069081	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.114286
18	32069110	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.103448
18	32069116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
18	32069140	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32070094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0416667
18	32070115	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0392157
18	32070141	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.115385
18	32070144	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.207547
18	32070167	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0434783
18	32070206	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32070281	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0483871
18	32070300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0454545
18	32070338	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0240964
18	32070393	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0289855
18	32070423	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0923077
18	32070433	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.084507
18	32070445	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.037037
18	32070766	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0810811
18	32070769	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0526316
18	32070785	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0588235
18	32070805	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0540541
18	32070808	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0810811
18	32070809	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0571429
18	32070870	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0857143
18	32070871	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0789474
18	32070887	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0606061
18	32070924	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32070965	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0408163
18	32070966	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0612245
18	32070978	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0384615
18	32071161	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0625
18	32071235	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0465116
18	32071300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0441176
18	32071377	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0561798
18	32071395	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0421053
18	32071396	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.03125
18	32071399	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0842105
18	32071923	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.190476
18	32071927	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0816327
18	32071930	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0588235
18	32071974	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.028169
18	32071989	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0394737
18	32072002	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0632911
18	32072090	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0392157
18	32072093	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.08
18	32072094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.244898
18	32072103	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0408163
18	32072116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.101695
18	32072156	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.236842
13	32510741	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	32604223	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.4
1	32621211	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.25
1	32682314	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	32682327	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	32682595	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	32682681	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32683020	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	32683022	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.75
1	32683034	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	32683090	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	32683135	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	32683162	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.3
1	32683733	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32683842	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	32683885	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.545455
1	32683894	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32683895	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.3
1	32683901	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.75
1	32683907	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	32744662	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.04
12	32744663	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.04
6	33005238	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	33005247	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.046875
6	33005250	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	33005300	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	33005309	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0652174
6	33005368	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.06
6	33005380	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.854167
6	33005392	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	33005409	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.228571
6	33005415	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.137931
6	33005429	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0789474
6	33005440	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.636364
6	33005453	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.103448
6	33005459	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	33005645	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.25
6	33005646	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.571429
6	33005742	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.233333
6	33005769	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	33005780	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.395349
6	33005797	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.170213
6	33005798	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	33005807	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0454545
6	33005808	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0425532
6	33005853	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	33005854	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.23913
21	33263948	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.555556
21	33263955	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	33263959	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.176471
21	33263998	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	33264042	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	33264056	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.461538
21	33264079	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.473684
21	33264080	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.176471
21	33264779	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	33264783	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	33264835	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.294118
21	33264840	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.125
21	33264841	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	33264844	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.642857
21	33264854	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.25
21	33264916	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.5
21	33264920	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.5
21	33264941	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	33300472	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0550459
6	33300776	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0532787
6	33300844	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0306122
6	33301511	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0409556
15	34231279	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.3
15	34231280	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.2
15	34231315	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.25
15	34231318	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.25
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.6875
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	34231686	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.1
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.545455
15	34231746	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34232288	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34232304	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	34232343	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0666667
15	34232344	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	34232357	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0526316
15	34232360	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0487805
15	34232392	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	34232507	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	34470191	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.25
17	35010640	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0705882
17	35010676	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0615385
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.119048
1	35602113	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	35602127	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.382979
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.152174
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.45614
1	35602165	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	35602167	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0508475
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.265306
1	35602187	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	35602216	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.490566
1	35602220	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	35602232	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0980392
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.464286
1	35602275	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
1	35602285	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.484848
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.413793
1	35602565	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.170213
1	35602583	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.195652
1	35602594	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	35602595	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.22449
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.456522
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.351351
1	35602636	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0681818
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	35602675	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.145833
1	35602676	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
1	35602677	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.170213
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	35602692	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.390244
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.258065
1	35602763	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.192308
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.423077
22	35659829	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.16
22	35659830	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.28
22	35659905	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	35659927	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	35659964	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.380952
22	35659976	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0967742
22	35661142	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.307692
22	35661159	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.148148
22	35661178	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.1875
22	35661201	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.157895
22	35661214	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	35661237	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	35661308	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
9	36215301	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.538462
9	36215312	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	36216765	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0571429
9	36216783	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.375
9	36216800	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.206897
9	36216898	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.307692
9	36216901	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.357143
9	36216953	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37102068	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	37102071	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	37102074	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.097561
2	37102092	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.097561
2	37102095	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.317073
2	37102118	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37102128	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0363636
2	37102140	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	37102164	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.185185
2	37102170	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0535714
2	37102171	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	37102188	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.148936
2	37102204	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.121951
2	37102209	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	37102218	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
2	37103333	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	37103360	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	37103468	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	37103469	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	37103471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.65
2	37103477	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37103876	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0746269
2	37103880	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.046875
2	37103882	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	37103885	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
2	37103894	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37103895	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.367347
2	37103922	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.195652
2	37103946	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	37103973	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.131579
2	37103976	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.351351
2	37104018	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	37104028	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	37104057	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	37104064	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.25
2	37104078	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.137931
2	37104382	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	37104471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	37104497	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.075
2	37104499	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.075
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.295455
2	37104521	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37202389	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37202390	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37204377	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	37204378	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	37204443	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	37204458	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	37204461	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
9	37503316	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	37503328	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.08
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0909091
9	37503370	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0833333
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.212121
9	37503457	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	37503458	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.114286
9	37503493	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	37503498	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.115385
17	37614041	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	37861101	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	37861102	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	37861463	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	37861509	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	37861534	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	37888774	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0909091
22	37888869	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.2
22	37889009	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.222222
22	37889316	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0740741
22	37889347	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0952381
17	38849502	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	38849508	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	38849511	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	38849515	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	38849532	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	38849582	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.310345
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.538462
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.321429
17	38849615	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	38849890	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0508475
17	38849917	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	38849925	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	38849961	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.206897
17	38849970	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.129032
17	38849996	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	38868084	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.5
19	38868085	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	38970748	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.178571
8	38971692	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.12
8	38971706	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.047619
8	38971800	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0638298
8	38971810	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.08
8	38971816	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.1
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.244898
8	38971832	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	38971897	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.44
8	38971934	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0727273
8	38972218	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.25
8	38972235	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.413043
8	38972256	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.18
8	38972320	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.381818
8	38972326	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0727273
8	38972328	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0508475
8	38972446	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.254902
8	38972447	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.5
8	38972459	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
8	38972958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
8	38972961	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.116279
8	38973012	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0576923
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0819672
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0806452
8	38973067	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0810811
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.130435
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.304348
22	39018918	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.125
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.363636
22	39019869	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.2
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.454545
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.545455
22	39020058	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	39256155	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	39426944	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	39427505	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	39427564	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	39427577	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.4
19	39427590	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	39427954	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	39427969	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	39427974	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.75
19	39427989	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.5
19	39490528	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	39490530	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	39491979	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	39491986	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	39492231	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.4
3	40464044	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	40825834	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.121212
5	40825843	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.16129
5	40825844	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	40826926	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0508475
5	40830350	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	40830362	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	40830363	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	40830389	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	40830424	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.2
5	40830593	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	40830594	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.08
5	40830635	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	40830675	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	40831163	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.25
5	40831173	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	40831243	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.2
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.32
19	41871481	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	41871534	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	41871544	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	41871556	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.647059
19	41871559	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.538462
19	41872620	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.15
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.138889
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.342105
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.3
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.275
19	41872649	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.097561
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.409091
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.574468
19	41872801	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	41872803	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.275
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.128205
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.125
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0857143
6	42079616	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	42079815	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42207256	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42207359	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0416667
15	42532257	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.047619
15	42532297	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	42543419	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	42567145	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	42567788	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	42567882	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	42569496	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.125
15	42569507	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	42569542	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42886873	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42888198	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.266667
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	42888229	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.125
6	42888269	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	42888309	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.227273
6	42888317	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	42888367	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	42888372	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.533333
6	42888378	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.357143
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.277778
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.148148
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.62069
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.241379
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.115385
6	42889221	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42889226	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.138889
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.378378
6	42889283	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	42889289	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	42889290	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.419355
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.12
6	42889320	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42889342	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.08
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.217391
21	42909813	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.363636
21	42909823	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43020436	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43020450	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43020458	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	43020459	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.4
8	43020845	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	43020846	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.416667
8	43020872	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	43020905	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.294118
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020939	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020945	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	43020955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.416667
8	43020981	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43021014	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	43021022	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43021023	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.210526
8	43021047	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43021365	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43021383	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	43021407	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	43021483	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43021486	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.571429
8	43021500	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43021525	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	43021544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021575	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	43380571	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.3
5	43381597	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.411765
12	43787802	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	43787828	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	43787936	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.125
12	43787946	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	43787971	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.125
22	44170070	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.391304
22	44170094	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	44170126	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	44170184	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.2
22	44170221	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	44450098	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	44578718	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0235294
7	44578742	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0235294
7	44578744	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0243902
7	44578754	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0422535
3	44749130	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	44749132	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.192308
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.5
3	44749170	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	44749199	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	44749207	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	44749280	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.08
3	44749281	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.291667
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.409091
3	44749367	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.733333
3	44749387	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.454545
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.813953
7	44801907	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.029703
7	44801910	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0291262
7	44801912	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0291262
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.206186
7	44801990	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.140845
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.296296
7	44802258	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.731707
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.352113
7	44802334	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0821918
7	44802423	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.04
20	45077457	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.146789
20	45077460	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0521739
20	45078229	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.357143
20	45078299	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.346667
20	45078305	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.184211
20	45078306	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.5125
20	45078309	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0864198
20	45078310	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0759494
20	45078323	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0454545
20	45078347	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.102564
20	45079028	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0526316
20	45079068	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.372093
20	45079076	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0240964
20	45079095	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.03125
20	45079118	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.152778
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.243243
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.753086
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.252747
20	45079149	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.025641
20	45079173	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.177419
20	45079198	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.113636
20	45079200	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.404494
20	45079204	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.047619
13	45334144	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.25
22	45340986	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	45341037	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.130435
22	45341071	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	45680795	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.363636
18	46080652	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	46603582	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.047619
X	46603594	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	46603727	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	46603756	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	46603770	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	46604518	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.722222
X	46604525	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	46604530	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.125
X	46604561	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.2
X	46604571	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.416667
X	46604579	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	46604581	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	46604589	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.16
X	46604606	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.3
X	46604614	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.233333
X	46604628	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	46604633	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	46604659	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	46604678	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.12
X	46604698	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.173913
X	46604704	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.227273
X	46604705	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.173913
X	46605069	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.32
X	46605079	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.592593
X	46605108	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	46605128	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.32
X	46605144	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	46605899	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.21875
X	46605911	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	46605974	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	46605988	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.270833
X	46606072	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0555556
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
16	48352384	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	48352390	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	48352391	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	48352443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	48352444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	48353264	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	48353439	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	48354334	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.25
16	48354337	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48354470	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	48354472	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	48354483	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.253333
3	48749578	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0895522
3	48749586	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0454545
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.126984
3	48749613	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0307692
3	48749618	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.103448
3	48749675	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0363636
3	48749685	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.169811
3	48749752	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.05
3	48749759	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
3	48749771	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0344828
3	48750033	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	48750129	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.129032
3	48750147	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	48750153	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
3	48750198	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	48750200	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0851064
3	48750207	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0545455
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.115385
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.313725
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.345455
3	48750263	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0862069
3	48750281	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.078125
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.126984
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.103448
3	48750301	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0322581
3	48750423	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.407407
3	48750476	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.8125
17	48864247	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	48864316	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	49415262	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0363636
3	49415288	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0701754
3	49415354	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.232143
3	49415355	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0943396
3	49415409	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	49415419	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.05
3	49415465	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0810811
14	49575767	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.2
17	49830409	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.103448
17	49831086	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.125
17	49831106	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.294118
10	49973404	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.285714
10	49973405	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.285714
10	49973420	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	49973421	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.388889
10	49973494	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.357143
16	50105681	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.3
14	50325998	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.538462
14	50326005	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.571429
14	50326020	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50327103	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	50327149	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	50327198	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50327214	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50327250	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50327322	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	50327323	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	50327535	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.384615
14	50327566	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50327594	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50327604	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.769231
14	50327699	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	50673193	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	50673254	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.08
12	50930336	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.269231
12	50930339	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	50930344	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	50930380	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.282051
12	50930409	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.242424
12	50930475	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.125
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.121212
12	50930540	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.211538
12	50930661	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	50930664	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
12	50930683	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0980392
12	50930684	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.245283
12	50930701	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.06
12	50930713	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.244898
12	50930739	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.1
12	50930762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	50930802	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0597015
12	50930843	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0491803
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.229508
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.314286
12	50930860	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0454545
12	50931446	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.137931
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.392857
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	50931504	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.115385
12	50931505	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.12
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.28
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	50931623	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	50931632	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	50931652	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.162162
12	50931671	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.1
12	50931752	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.4
12	50931812	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	50964331	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	51913757	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	52031763	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	52031832	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	52031835	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.5
19	52031898	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	52031934	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	52031953	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	52032551	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.272727
13	52691218	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52691226	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	52775707	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	52775770	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	52776676	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.7
1	52823911	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52824014	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.692308
1	52824016	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	52824086	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	52824087	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	52824207	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52824220	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.615385
1	52824268	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	52825748	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.615385
1	52825753	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	52825762	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	52839063	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.1
19	52839344	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.238095
19	52880443	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.3
19	53411158	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	53875794	A->G	+	ENSG00000179820	MYADM	protein_coding	three_prime_utr	.	.	Alu	0.0231481
12	54240522	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.3
19	54353861	A->G	-	ENSG00000167613	LAIR1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.857143
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.692308
X	54560993	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.384615
X	54561004	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.25
X	54561022	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	54888983	A->G	+	ENSG00000186431	FCAR	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	55367486	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.3
14	55367492	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.8
14	55367498	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.5
14	55367499	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.5
14	55367500	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.2
14	55367649	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0869565
14	55367658	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.125
14	55368248	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.391304
19	55389275	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.2
19	55390304	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	55390305	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	55390414	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	55825105	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	55825184	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.1
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.3125
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.277778
4	56460070	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.125
4	56460096	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.647059
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.416667
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	56460163	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.25
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.125
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	57214494	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	57214518	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	57216272	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.125
3	57272806	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	57626465	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	57626662	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.108108
3	57627206	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	57627308	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	57627416	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	57627417	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	57757017	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.305556
19	57757019	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.314286
19	57757104	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.186047
19	57757110	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.04
19	57807314	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	57807717	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	57864869	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.391304
19	58126805	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	58126808	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	58126888	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	61049630	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	61050331	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	64322880	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0243902
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
17	64322887	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0340136
17	64322944	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
17	64322997	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.04
12	64450338	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	64450369	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	1
17	64467719	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	64467724	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	64467773	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.25
17	64467774	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	64467775	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.25
17	64468339	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.137255
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.894737
17	64468389	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.121951
17	64468399	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.102564
17	64468418	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.102564
17	64468428	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	64468450	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.108108
17	64468454	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	64468455	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	64468498	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.1
17	64468523	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	64468566	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	65149228	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	65150138	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.416667
15	65150145	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.25
5	65668097	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.454545
11	65775920	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.028169
11	65775921	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
11	65775963	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0862069
11	65775967	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0862069
11	65775987	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.121951
11	65776002	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
11	65776029	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
11	65776158	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	65776163	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	65776871	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0795455
11	65776884	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0246914
11	65776894	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0813953
11	65776910	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.300971
11	65776911	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.204082
11	65776912	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.114583
11	65776955	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.155844
11	65776999	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0746269
11	65777014	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.047619
11	65777019	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.220588
11	65777032	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	65777052	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.421053
11	65777096	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.435484
11	65777104	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
7	66153254	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0806452
7	66153267	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0344828
7	66153284	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.03125
7	66153308	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	66153310	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0961538
7	66153318	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0377358
7	66153319	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0344828
7	66153328	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0576923
7	66153345	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0350877
7	66153371	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	66153833	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	66153875	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0727273
7	66153883	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.115385
7	66153900	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0877193
7	66153914	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	66153932	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	66153950	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0638298
7	66153973	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0517241
7	66153993	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.08
7	66154250	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.255319
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0980392
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.102041
7	66154269	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	66154275	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0392157
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.711111
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.195652
7	66154357	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.148936
7	66154360	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	66154379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.22
15	66333543	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	67339204	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	67339236	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.25
1	67409176	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.533333
1	67409184	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	68755660	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.25
11	68755681	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.233333
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.107143
11	68755888	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.25
11	68755957	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.08
11	68755965	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.421053
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.411765
11	68756029	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	68756030	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.35
16	70248685	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.125
16	70248723	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	70249181	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.184211
16	70249236	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	70249315	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.565217
16	70249322	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	70249335	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	70249336	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	70249757	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	70249877	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.227273
16	70249888	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70249889	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	70249912	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.375
16	70379687	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.0240964
16	70379918	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	70574579	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70574740	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	71973025	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.1
10	72234269	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.235294
10	72234282	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.315789
10	72234877	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.225806
10	72234879	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	72234934	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.21875
10	72234949	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0967742
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	72235004	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.307692
10	72235009	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.107143
10	72235030	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	72235031	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.115385
10	72235070	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.642857
10	72235076	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.25
10	72235380	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.615385
10	72235443	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0689655
10	72235451	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0833333
4	73057357	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.2
4	73057732	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.833333
10	73249039	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.113636
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.190476
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.121951
10	73249087	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0731707
10	73249089	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0731707
10	73249097	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.047619
10	73249114	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.05
10	73249115	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0540541
10	73249149	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.03125
10	73249155	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	73249190	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0588235
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.391304
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.102564
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.148148
10	73249834	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.111111
10	73249893	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0571429
10	73249907	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0857143
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.169492
10	73249963	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0983607
10	73249964	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0327869
10	73250023	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.162162
10	73250060	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0425532
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	73250163	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.189189
10	73250329	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.148148
6	73424190	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	73424352	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.263158
6	73424951	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	73424991	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	73425033	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.155556
6	73425036	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.326087
6	73516370	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0429185
6	73516501	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0286738
6	73516560	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0257511
6	73516586	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
14	74058071	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.5
14	74060272	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	74060273	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	74060281	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.307692
7	74231844	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.2
7	74231926	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	74455866	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.3
15	75419557	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	75419569	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.172414
15	75419602	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.075
15	75420560	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	75420562	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.137931
15	75420563	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	75445424	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	75445426	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.125
16	75445433	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.232558
16	75445458	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	75445496	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.71875
16	75445515	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.1
16	75445523	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.242424
16	75445569	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	75445570	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.171429
16	75445572	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.4
16	75445576	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.34375
16	75445586	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.129032
16	75445919	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	75445933	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.242424
16	75445934	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	75445993	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.323529
16	75446009	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.484848
16	75446012	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.184211
16	75446063	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	75446066	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	75446075	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	75446112	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.125
12	75496034	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.5
12	75496066	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.37037
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.740741
12	75496115	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.28
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.321429
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.818182
12	75496273	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.27907
12	75496292	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
12	75496341	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.666667
17	75889858	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.285714
4	75917659	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	75942997	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	75943060	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	75944218	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.4375
17	75944226	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	1
17	75944794	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	75944807	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	75944808	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75945013	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	75945018	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.5
14	76205018	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0512821
14	76205039	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0425532
14	76207066	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	77827502	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.131148
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.184615
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.257576
X	77827514	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
X	77827518	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
X	77827534	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0461538
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.213115
X	77827566	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.030303
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0684932
X	77827609	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	77827610	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.05
X	77827619	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0759494
X	77827621	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.1125
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.202532
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.169231
X	77827677	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0289855
X	77827682	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.106061
X	77827712	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0879121
X	77827729	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0277778
X	77827735	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0235294
X	77828020	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	77828077	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.127273
X	77828078	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	77828088	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0547945
X	77828117	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0533333
X	77828118	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.08
X	77828120	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.263889
X	77828144	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	77828147	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0363636
X	77828148	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.140351
X	77828156	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.116667
X	77828157	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0677966
X	77828162	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
X	77828173	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.129032
X	77828175	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.078125
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.34375
X	77828207	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.05
X	77828226	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.267857
X	77828331	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.486111
X	77828382	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.163636
X	77828383	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.163934
X	77828394	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.433962
X	77828417	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.472727
X	77828418	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.518519
X	77828423	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
X	77828442	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0298507
X	77828467	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.031746
X	77828484	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	77828485	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0649351
X	77828491	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	77828503	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0315789
X	77828504	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.164948
X	77828510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.040404
X	77828520	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0759494
X	77828541	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0222222
X	77828545	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0430108
11	78068904	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.368421
11	78069057	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	80627542	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.2
2	85319250	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0277778
2	85319274	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.03125
2	85319275	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0615385
2	85319328	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0412371
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0612245
2	85319342	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0326087
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.100917
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0420168
2	85319396	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.031746
2	85610279	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	89182578	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	89183686	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	89183696	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	89183741	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	89183779	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	89183804	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	89183866	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	89183877	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	89563498	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.388889
16	89563592	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	89563618	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.3125
6	89634503	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	93448441	A->G	-	ENSG00000188938	FAM120AOS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	93735606	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	93735630	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.380952
3	94127965	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.3125
3	94127966	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	94128173	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	96249515	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0289855
8	97726820	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	97726980	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	97726981	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0857143
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0731707
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.1
8	97728688	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	97728689	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.09375
8	97728707	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.107143
12	98548843	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	98548910	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.428571
12	98548917	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	98548918	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.138889
12	98548920	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.128205
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0350877
12	98549030	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0327869
12	98549041	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	98549042	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.576923
12	98549066	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	98549102	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.8
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.257143
12	98549126	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.121951
12	98549225	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	98549233	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.487179
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	1
12	98549305	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.436364
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.303571
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.305085
12	98549404	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.126582
12	98549423	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	99195810	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	99195826	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	99195848	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	99195873	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.722222
2	99195935	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	99195951	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.318182
2	99195966	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	99195984	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	99195987	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.375
2	99196001	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.25
2	99196002	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.125
2	99196046	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	99196076	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	99196352	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.727273
2	99196354	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	99196380	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.75
2	99196401	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	99196440	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	99196515	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	99196525	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.272727
10	100232437	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	100232502	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.4375
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.5625
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.176471
10	100232668	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	100232926	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	100232927	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.102564
10	100232933	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	100232981	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
10	100233024	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	100233026	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.37037
10	100233036	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.344828
10	100233048	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
10	100233053	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	100233065	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.148148
10	100233091	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
10	100233141	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.4
10	100233142	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.3
X	101010296	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	101010300	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	101010329	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	101010349	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.2
X	101010355	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.315789
X	101010360	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	101010402	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.473684
X	101010404	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.684211
2	101271386	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	101271398	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.257143
2	101271399	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.171429
2	101271421	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.25641
2	101271425	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	101271520	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0461538
2	101271532	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.152542
2	101271537	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.12069
2	101271546	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.147541
2	101271575	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	101823564	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.125
3	101823964	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101823970	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	101823993	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101824739	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	102036950	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.153846
7	102449596	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	102451080	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
10	102476394	A->G	+	ENSG00000138111	MFSD13A	protein_coding	three_prime_utr	.	.	Alu	0.2
4	102753947	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0810811
14	105049680	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.056338
6	108042691	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.833333
11	108365742	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.2
11	108365750	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.25
11	108365758	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	108365759	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	109689136	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	109851679	A->G	-	ENSG00000139433	GLTP	protein_coding	three_prime_utr	.	.	Alu	0.0231214
9	113292066	A->G	+	ENSG00000136875	PRPF4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
9	113292155	A->G	+	ENSG00000136875	PRPF4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	115829866	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	115829894	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.5
5	115830034	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	116714628	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.545455
12	116714712	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	119394843	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	119538614	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	119538615	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	119538639	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.529412
X	119538663	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.1
X	119538678	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.290323
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.387097
X	119539275	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	119539287	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.257143
X	119539306	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	119539314	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0444444
X	119539349	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	119539352	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	119539365	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	119539368	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.185185
X	119539468	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.2
X	119539474	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.4
10	119572211	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.4
X	120437993	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.020979
X	120438106	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0229885
12	120460750	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.6
12	120460751	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.2
12	120460858	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.2
12	120461272	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	1
12	120461365	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	121778196	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0333333
12	121778329	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0350877
12	121778339	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.03125
12	121778382	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.031746
12	121778420	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.075
5	122027179	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.35
5	122027180	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.368421
12	123412177	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123412239	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123412280	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123412337	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.4
12	123412340	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	123412413	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123412414	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123412421	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	123412436	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.352941
12	123661770	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	123661849	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.2
12	123662050	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.461538
12	123662054	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123909158	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.307692
X	123909266	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	123909293	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.35
X	123909305	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.190476
X	123910615	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	123910709	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	123911222	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	123911223	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.25
X	123911531	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123911535	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	123911555	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	123911593	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	123912456	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	123912479	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	123912484	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.586207
X	123912567	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	123912590	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.578947
X	123912740	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.25
X	123912741	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.909091
X	123912870	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.916667
X	123912908	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	123912920	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123912922	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	123912929	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	123913015	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1
X	123913198	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	123913243	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.08
X	123913257	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.185185
X	123913262	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.444444
X	123913295	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	123913315	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123913318	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	123913319	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123913323	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.48
X	123913331	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	123913420	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.205128
X	123913435	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	126625355	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.176471
5	126625387	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.210526
5	126625518	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	126625842	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126625856	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.4
5	126625862	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.5
2	127845513	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.2
2	128191597	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	128191604	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	128191681	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	128193533	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.866667
2	128193549	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	128194450	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	128194467	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	128195125	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	128309254	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.3
5	131162132	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
5	131201462	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.636364
5	131201694	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.857143
5	131201710	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.4375
12	132721316	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	132721318	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.705882
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.76
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	132721433	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.08
12	132721467	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	132721535	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.5
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.264706
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	132721689	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	132721753	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.826087
12	132721754	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.26087
12	132721763	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.4
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.714286
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.625
12	132722331	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	132722351	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.125
12	132722430	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.08
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.448276
12	132769969	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	132770000	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.2
5	134402579	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	139045647	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.192727
4	139045723	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.281022
3	141946786	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.3
3	141948285	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141948307	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.7
3	141948848	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	141948861	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	141948915	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	141949877	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141949878	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	141949916	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.411765
3	141949946	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141949977	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.125
3	141949986	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	141949989	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	141950000	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	141950003	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	141950023	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	141950026	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.5
3	141950034	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	141950039	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141950079	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.611111
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.777778
1	145745230	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0652174
1	145745244	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	145745275	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	145745324	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	145745364	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.1
1	145745370	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.421053
1	145745519	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.7
1	145745521	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.7
1	145746104	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	145746114	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	145746126	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	145746144	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	145746149	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	145921979	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.272727
1	145921980	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.25
1	145921998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.411765
1	145922058	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.181818
1	145922075	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.727273
1	145922076	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.6
1	145922969	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.2
1	145923019	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.3
6	149591088	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0461538
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	149591241	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.037037
6	149591247	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
6	149725337	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	149725348	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.4
6	149726240	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150308645	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	150308646	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	150364978	A->G	-	ENSG00000070814	TCOF1	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	150364983	A->G	-	ENSG00000070814	TCOF1	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	150621411	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.15
1	150621412	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	150621414	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	150621549	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	150731109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	150731131	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	150731136	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.269504
1	150731137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.717241
1	150731143	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	150731153	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0331126
1	150731158	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.330935
1	150731166	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0493827
1	150731171	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.128205
1	150731185	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.117021
1	150731196	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	150731200	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.234568
1	150731203	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	150731216	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.174419
1	150731220	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0235294
1	150731221	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.488095
1	150731222	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.372093
1	150731225	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	150731231	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0612245
1	150731239	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	150731240	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.144444
1	150731244	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.119565
1	150731266	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	150731269	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0866142
1	150731270	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0234375
1	150731276	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.461538
1	150731279	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0413793
1	150731288	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0678733
1	150731301	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0679612
1	150731305	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0688525
1	150731306	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0262295
1	150731311	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.600671
1	150731326	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0248447
1	150731336	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.117834
1	150731362	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.125
1	150731374	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.712389
1	150731384	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.128405
1	150731386	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	150731936	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.16443
1	150731937	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.511706
1	150731942	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.245552
1	150731972	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0552995
1	150732000	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.254237
1	150732005	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0844156
1	150732007	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.178344
1	150732010	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	150732068	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0653846
1	150732072	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0351562
1	150732089	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.046332
1	150732092	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0682731
1	150732109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.310044
1	150732111	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.157205
1	150732129	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.116129
1	150732137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.174847
1	150732157	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.608541
1	150732160	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.265233
1	150732177	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.152299
1	150732178	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.205556
1	150732183	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.10452
1	150732184	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0478873
1	150732736	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0605714
1	150732740	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0475561
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0705521
1	150732767	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0484694
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.159951
1	150732802	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.107185
1	150732810	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0566426
1	150732856	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0385093
5	151268183	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.396825
5	151268414	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0245098
5	151268432	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0231481
1	155881829	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	156540349	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.027027
3	156540416	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.58
3	156540438	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.1
3	156540441	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.642857
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.533333
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.375
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.5625
3	156541434	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0315789
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.353846
3	156541503	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0517241
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.418182
3	156541528	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	156541535	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0487805
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.393939
3	156541552	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.15625
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.630435
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.548387
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
5	157740793	A->G	+	ENSG00000113272	THG1L	protein_coding	three_prime_utr	.	.	Alu	0.25
6	159679849	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0226757
6	159679850	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0518018
6	159679878	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0303867
6	159680701	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0208333
1	160996511	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	160996554	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0220588
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.361538
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.317829
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.218045
1	160996583	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0288462
1	160996594	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0229885
1	160996603	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	160996628	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0243902
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.554217
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.19697
1	160998027	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.229508
1	160998049	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0338983
1	160998064	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0461538
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.260274
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.148649
1	160998106	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0684932
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.236111
1	160998148	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0595238
4	165078036	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.190476
4	165078037	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	168249256	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0337079
1	168249284	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
1	168249305	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0641026
1	168249335	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0210526
1	168249336	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0208333
1	168251048	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	168251094	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0888889
1	168251165	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	168251169	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	168251174	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0338983
1	168251237	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.109756
1	168251251	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.126437
5	168549861	A->G	-	ENSG00000120137	PANK3	protein_coding	three_prime_utr	.	.	Alu	0.104167
5	168549888	A->G	-	ENSG00000120137	PANK3	protein_coding	three_prime_utr	.	.	Alu	0.102041
1	179073557	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	179073562	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	179073566	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	179074957	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	179074961	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	179074965	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.35
1	179074975	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.277778
3	179397767	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.025974
3	179397783	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0384615
3	179397833	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0465116
3	179397839	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.657143
3	179397847	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.15625
3	179397909	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	179397910	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.25
3	179397913	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	179397996	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	179398001	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.571429
3	179398002	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.714286
3	179398008	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	179398010	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.2
3	179398024	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	179398258	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	179398270	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.304348
3	179398280	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.5
3	179398289	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	179398349	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	179398352	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	179398429	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.909091
3	179398432	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	179399245	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.146341
3	179399376	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0882353
3	179399445	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	184791989	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	184792028	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	184792045	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.147059
1	184792054	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.102564
1	184792137	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	184792140	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	184792178	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.147059
1	184792216	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.15625
1	184792227	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	184793338	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.12963
1	184793353	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.228571
1	184793373	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	184793376	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	184793390	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.25
1	184793447	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.193548
1	184793448	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	184793456	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	184793493	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	184793499	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0697674
1	184793542	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.227273
3	194641711	A->G	-	ENSG00000041802	LSG1	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	196352409	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0857143
3	196352418	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	196352422	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.114286
3	196352434	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.233333
3	196352512	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	196352735	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	196352737	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.259259
3	196352749	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.347826
3	196352750	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.4
3	196352812	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	196352820	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.466667
3	196352826	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	196353751	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	196353753	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	200977594	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	200977600	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.380952
2	200977668	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	200977694	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	200977703	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	200977711	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	200977751	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.125
2	200977756	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.375
2	200977769	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.25
2	200977808	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.2
2	200977821	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	200977838	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.615385
2	200977846	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.714286
2	200978572	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.5625
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.5
2	201167246	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	201217945	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	201219149	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	201219176	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	201219182	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	201287383	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	201287385	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.25
2	206122546	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.636364
2	206122808	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	207754653	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	207754677	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	207754690	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.16129
2	207754697	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.392857
2	207754737	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	207754738	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.206897
2	207754755	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	1
2	207754767	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.290323
2	207754779	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.205882
2	207754926	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.607143
2	207754928	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	207754938	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	207754945	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	207754969	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	207754975	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	207755018	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.793103
2	207755025	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.827586
2	207755033	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	207755051	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	207755281	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
2	207755282	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.102564
2	207755384	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	207755398	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.351351
2	216501757	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.037037
2	216501773	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0677966
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.412698
2	216501798	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	216501804	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0892857
2	216501811	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0877193
2	216501817	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.192308
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.58
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	216501875	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0487805
2	216501883	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.06
2	216501892	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	216501903	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.186047
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	216501951	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	216501976	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	216501990	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.933333
2	216501999	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	216502063	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	216502070	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.15
2	216502071	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	216502098	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	216502112	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.225806
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.407407
2	216502162	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	216502174	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	216502178	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	216502196	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.47619
2	216502207	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.137931
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	216502248	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	216502255	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0681818
1	225786972	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	225786982	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	225983639	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0679612
1	225983676	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0340909
1	225983699	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.208333
1	225984164	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0752688
2	233205624	A->G	+	ENSG00000168918	INPP5D	protein_coding	three_prime_utr	.	.	Alu	0.2
MT	9899	A->G	-	ENSG00000198938	MT-CO3	protein_coding	CDS	.	.	Alu	1
1	149887299	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.193548
1	149887304	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.735294
1	149887318	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.176471
1	149887323	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.0882353
1	149887567	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.217822
1	149887568	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.0918367
1	149887575	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.511111
1	149887584	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.75
1	149887592	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.493671
1	149887647	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.3
19	57864877	A->G	+	ENSG00000204514	ZNF814	protein_coding	exon	.	.	Alu	0.0833333
4	2471084	A->G	+	ENSG00000063978	RNF4	protein_coding	five_prime_utr	.	.	Alu	0.107143
12	6943922	A->G	+	ENSG00000111678	C12orf57	protein_coding	five_prime_utr	.	.	Alu	0.411765
19	8418594	A->G	+	ENSG00000099785	2-Mar	protein_coding	five_prime_utr	.	.	Alu	0.08
19	8418719	A->G	+	ENSG00000099785	2-Mar	protein_coding	five_prime_utr	.	.	Alu	0.0384615
1	16592284	A->G	-	ENSG00000219481	NBPF1	protein_coding	five_prime_utr	.	.	Alu	0.230769
1	23959998	A->G	+	ENSG00000189266	PNRC2	protein_coding	five_prime_utr	.	.	Alu	0.333333
3	41221475	A->G	+	ENSG00000168036	CTNNB1	protein_coding	five_prime_utr	.	.	Alu	0.0350877
3	49406739	A->G	-	ENSG00000067560	RHOA	protein_coding	five_prime_utr	.	.	Alu	0.107143
7	99377442	A->G	+	ENSG00000130429	ARPC1B	protein_coding	five_prime_utr	.	.	Alu	0.0357143
8	38247331	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.153846
8	38247344	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.125
8	38247359	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.142857
8	38247381	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.157895
8	38247382	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.421053
8	38247394	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.526316
8	38247403	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.0952381
10	15102306	A->G	+	ENSG00000152464	RPP38	protein_coding	five_prime_utr	.	.	Alu	0.2
10	72220129	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.103448
12	68624617	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.0833333
12	68624695	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.107143
12	68641044	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.136364
12	68641075	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.125
12	68641123	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.0857143
12	68641128	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.0555556
16	15652037	A->G	+	ENSG00000072864	NDE1	protein_coding	five_prime_utr	.	.	Alu	0.0833333
16	18900010	A->G	-	ENSG00000157106	SMG1	protein_coding	five_prime_utr	.	.	Alu	0.447761
17	28672805	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.3
17	68285558	A->G	-	ENSG00000141337	ARSG	protein_coding	five_prime_utr	.	.	Alu	0.0740741
17	68285607	A->G	-	ENSG00000141337	ARSG	protein_coding	five_prime_utr	.	.	Alu	0.121212
17	68285613	A->G	-	ENSG00000141337	ARSG	protein_coding	five_prime_utr	.	.	Alu	0.125
17	68285618	A->G	-	ENSG00000141337	ARSG	protein_coding	five_prime_utr	.	.	Alu	0.222222
17	68285624	A->G	-	ENSG00000141337	ARSG	protein_coding	five_prime_utr	.	.	Alu	0.181818
17	83049064	A->G	-	ENSG00000175711	B3GNTL1	protein_coding	five_prime_utr	.	.	Alu	0.16
18	12869026	A->G	-	ENSG00000175354	PTPN2	protein_coding	five_prime_utr	.	.	Alu	0.230769
18	12869028	A->G	-	ENSG00000175354	PTPN2	protein_coding	five_prime_utr	.	.	Alu	0.615385
18	12869050	A->G	-	ENSG00000175354	PTPN2	protein_coding	five_prime_utr	.	.	Alu	0.2
19	16081465	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.185185
19	47316541	A->G	+	ENSG00000197405	C5AR1	protein_coding	five_prime_utr	.	.	Alu	0.105263
19	52004586	A->G	-	ENSG00000197619	ZNF615	protein_coding	five_prime_utr	.	.	Alu	0.166667
19	52532974	A->G	+	ENSG00000198482	ZNF808	protein_coding	five_prime_utr	.	.	Alu	0.0689655
1	223818336	A->G	-	ENSG00000143514	TP53BP2	protein_coding	five_prime_utr	.	.	Alu	0.0454545
2	112275672	A->G	+	ENSG00000188177	ZC3H6	protein_coding	five_prime_utr	.	.	Alu	0.555556
2	131107726	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	five_prime_utr	.	.	Alu	0.214286
2	131107763	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	five_prime_utr	.	.	Alu	0.0909091
2	131107792	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	five_prime_utr	.	.	Alu	0.25
2	131107802	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	five_prime_utr	.	.	Alu	0.166667
2	232724667	A->G	+	ENSG00000204120	GIGYF2	protein_coding	five_prime_utr	.	.	Alu	0.2
2	241687798	A->G	+	ENSG00000168395	ING5	protein_coding	five_prime_utr	.	.	Alu	0.125
3	179325230	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0235294
3	179325283	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0265487
4	189941984	A->G	+	ENSG00000109536	FRG1	protein_coding	five_prime_utr	.	.	Alu	0.192308
4	189941998	A->G	+	ENSG00000109536	FRG1	protein_coding	five_prime_utr	.	.	Alu	0.25
5	163437663	A->G	+	ENSG00000113328	CCNG1	protein_coding	five_prime_utr	.	.	Alu	0.425926
GL000219.1	77120	A->G	-	ENSG00000273748	AL592183.1	protein_coding	Intergenic	.	.	Alu	0.5
GL000219.1	85486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
GL000219.1	99159	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
GL000219.1	99260	A->G	-	.	.	.	Intergenic	.	.	Alu	1
KI270713.1	21693	A->G	-	.	.	.	Intergenic	.	.	Alu	0.26257
KI270733.1	127993	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
MT	152	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	16126	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	16163	A->G	+	.	.	.	Intergenic	.	.	Alu	1
MT	16519	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	195	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	263	A->G	+	.	.	.	Intergenic	.	.	Alu	1
MT	73	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	101633015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	118981230	A->G	+	ENSG00000175556	LONRF3	protein_coding	Intergenic	.	.	Alu	0.166667
X	119673345	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.3
X	1209461	A->G	+	ENSG00000205755	CRLF2	protein_coding	Intergenic	.	.	Alu	0.1
X	1209471	A->G	+	ENSG00000205755	CRLF2	protein_coding	Intergenic	.	.	Alu	0.0952381
X	1209538	A->G	+	ENSG00000205755	CRLF2	protein_coding	Intergenic	.	.	Alu	0.238095
X	1209826	A->G	+	ENSG00000205755	CRLF2	protein_coding	Intergenic	.	.	Alu	0.3
X	1216018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	1232322	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
X	1240328	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	1240329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	1269384	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.692308
X	1270340	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.230769
X	1270343	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.230769
X	1270685	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	1
X	1273065	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.533333
X	1273088	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.470588
X	1274906	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	1
X	1276576	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.3
X	1276636	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.3
X	1320909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
X	1383352	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1383875	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1384014	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1384121	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
X	1384154	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0681818
X	1384199	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
X	1384481	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
X	1384487	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	1385116	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1441556	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.181818
X	1504707	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	1
X	154079184	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.25
X	154079218	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.3
X	154079221	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154081628	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
X	154081636	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
X	154088513	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.333333
X	154088523	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.307692
X	154088533	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.230769
X	154088894	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154088896	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.416667
X	154088908	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.75
X	154088909	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.666667
X	154088910	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.272727
X	154089086	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.470588
X	154089110	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.733333
X	154089116	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.133333
X	154089123	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.4
X	154089934	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.272727
X	15837012	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.153846
X	15837036	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.142857
X	15838951	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.181818
X	16736643	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.2
X	16736760	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.272727
X	16737196	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.285714
X	16737264	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.230769
X	16737300	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.142857
X	16738145	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.3
X	24179972	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.176471
X	24180008	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.352941
X	24180048	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.214286
X	24180085	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.3
X	24180181	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.454545
X	24180182	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.181818
X	24180451	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.166667
X	24180482	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.0666667
X	24180499	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.0689655
X	24180511	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.28125
X	24180527	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.0606061
X	24180547	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.15625
X	24180563	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.0571429
X	24180617	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.193548
X	24180621	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.361111
X	24180622	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.25
X	24180657	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.0588235
X	24186516	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.181818
X	2695791	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.166667
X	2695831	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2704675	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.133333
X	2718041	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2745782	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	38309745	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.615385
X	38309789	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.307692
X	38310009	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.133333
X	38310082	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.277778
X	38310104	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.133333
X	38310228	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.266667
X	38310230	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.266667
X	39786962	A->G	-	.	.	.	Intergenic	.	.	Alu	1
X	41163553	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.2
X	41163581	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.166667
X	41163939	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.1875
X	41164146	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.272727
X	44881358	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.142857
X	44883162	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.4
X	44883211	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.25
X	44883306	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44958389	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	46626049	A->G	+	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.416667
X	46626051	A->G	+	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.416667
X	46626052	A->G	+	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.166667
X	46653287	A->G	-	ENSG00000065923	SLC9A7	protein_coding	Intergenic	.	.	Alu	0.181818
X	47152047	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.0769231
X	47152069	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.08
X	47152133	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.0540541
X	47633357	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	47633405	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	48944922	A->G	-	ENSG00000068308	OTUD5	protein_coding	Intergenic	.	.	Alu	0.142857
X	49035913	A->G	-	ENSG00000068323	TFE3	protein_coding	Intergenic	.	.	Alu	0.181818
X	49036109	A->G	-	ENSG00000068323	TFE3	protein_coding	Intergenic	.	.	Alu	0.416667
X	49036114	A->G	-	ENSG00000068323	TFE3	protein_coding	Intergenic	.	.	Alu	0.181818
X	49036124	A->G	-	ENSG00000068323	TFE3	protein_coding	Intergenic	.	.	Alu	0.166667
X	53635457	A->G	-	ENSG00000086758	HUWE1	protein_coding	Intergenic	.	.	Alu	0.181818
X	54561640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.151515
X	54562342	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54562800	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54563297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.789474
X	54563341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.423077
X	54564472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	65685695	A->G	+	ENSG00000147065	MSN	protein_coding	Intergenic	.	.	Alu	0.125
X	65687201	A->G	+	ENSG00000147065	MSN	protein_coding	Intergenic	.	.	Alu	0.5
X	71293812	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.181818
X	71293873	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.454545
X	71564997	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.2
X	71565344	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.2
X	71565491	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.3
X	74260853	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74260905	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74261720	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.538462
X	74261758	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74261766	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.5
X	74262019	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.5
X	74273562	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.111111
X	74275355	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74275359	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74275417	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74576692	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	74580707	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	74580720	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	74580734	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	74580738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	74580739	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
X	74580895	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	74580907	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
X	74580925	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	74580960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	78115982	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.214286
X	78132111	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.0392157
X	78132268	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.0425532
X	9472721	A->G	+	ENSG00000101849	TBL1X	protein_coding	Intergenic	.	.	Alu	0.6
X	9475426	A->G	+	ENSG00000101849	TBL1X	protein_coding	Intergenic	.	.	Alu	0.181818
X	9475446	A->G	+	ENSG00000101849	TBL1X	protein_coding	Intergenic	.	.	Alu	0.3
Y	13384551	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.363636
Y	13393113	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.272727
Y	13467125	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.166667
Y	13467150	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.166667
Y	13467689	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.230769
Y	13468555	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.181818
Y	13468558	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.166667
Y	13469373	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.181818
Y	13475900	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.0833333
Y	13475904	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.208333
Y	19739251	A->G	-	ENSG00000012817	KDM5D	protein_coding	Intergenic	.	.	Alu	0.333333
Y	19739272	A->G	-	ENSG00000012817	KDM5D	protein_coding	Intergenic	.	.	Alu	0.25
Y	2938647	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.230769
Y	7330616	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
Y	7330634	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
4	353177	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intergenic	.	.	Alu	0.25
4	353211	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intergenic	.	.	Alu	0.4
4	470913	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
4	779508	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.2
4	779509	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.2
10	916437	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.176471
10	916547	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0833333
10	916571	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.333333
10	916608	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.217391
10	916612	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.714286
10	916656	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.3125
10	916795	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	1
10	916799	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.214286
10	916837	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.117647
10	916865	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.136364
10	916866	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.130435
10	916870	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.190476
10	916872	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.190476
10	916873	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.285714
10	916874	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0909091
10	916917	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.294118
10	916930	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.5
10	916957	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.444444
10	916973	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.333333
10	916977	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.578947
10	929415	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.4
10	929432	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.380952
10	929447	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.222222
10	929473	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.263158
10	999389	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.5
12	378299	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.181818
12	378306	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.363636
12	378422	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.272727
12	380206	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.125
12	380486	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.235294
12	380524	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.214286
12	380562	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.357143
12	380595	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.142857
12	380647	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.416667
12	380660	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.230769
12	383476	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.181818
12	874081	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.2
12	874095	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.153846
16	225244	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.181818
16	587936	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	398760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	489422	A->G	-	.	.	.	Intergenic	.	.	Alu	1
18	787627	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1221502	A->G	-	ENSG00000078808	SDF4	protein_coding	Intergenic	.	.	Alu	0.2
1	1397627	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.181818
1	1397789	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.4
1	1397855	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.2
1	1647255	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.526316
1	1647280	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.5
1	1821917	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.136364
1	1821953	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1821963	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1822040	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1831586	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1831587	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1838127	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	1838151	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1846759	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.307692
1	1846779	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.588235
1	1846835	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.285714
1	1865073	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1868601	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3
1	1875246	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.272727
1	1875361	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1875363	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1877584	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.4
1	1877610	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.285714
1	1877611	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1879992	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1875
1	1880476	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	1882192	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1882198	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1882306	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1883056	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1884062	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.105263
1	1884341	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1887701	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3
1	1887731	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.5
1	1887737	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1888645	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1
1	1888716	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.266667
1	1888738	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.285714
1	1889577	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.230769
1	2244070	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.0909091
1	2244095	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.125
1	2244392	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.111111
1	2244459	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.4
1	2244494	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.538462
1	2244525	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.111111
1	2279806	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.181818
1	8876911	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.136364
1	8907755	A->G	-	.	.	.	Intergenic	.	.	Alu	0.9375
1	9299384	A->G	+	ENSG00000171621	SPSB1	protein_coding	Intergenic	.	.	Alu	0.111111
1	9299397	A->G	+	ENSG00000171621	SPSB1	protein_coding	Intergenic	.	.	Alu	0.222222
1	9299497	A->G	+	ENSG00000171621	SPSB1	protein_coding	Intergenic	.	.	Alu	0.2
2	8793372	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.2
2	8793374	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.2
2	9520879	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.357143
2	9524290	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.259259
2	9524291	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.269231
2	9533129	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.272727
2	9549558	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.08
2	9549564	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.185185
2	9549566	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.0714286
2	9549567	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.142857
2	9549620	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.4
2	9550953	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.25
2	9550956	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9550993	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.1
2	9550999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.25
2	9551013	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.1
2	9617734	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.214286
2	9617805	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.25
2	9617832	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.388889
2	9617844	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.285714
3	5124535	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.105263
3	5124545	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	5181119	A->G	+	ENSG00000233912	AC026202.2	antisense	Intergenic	.	.	Alu	0.0754717
3	9446593	A->G	+	ENSG00000168137	SETD5	protein_coding	Intergenic	.	.	Alu	0.3
3	9651746	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.214286
3	9651752	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9651766	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.1875
3	9651770	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.133333
3	9651783	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.153846
3	9651888	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.5
3	9651912	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.454545
3	9652012	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.333333
3	9652013	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.583333
3	9652015	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.5
3	9652052	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.1
3	9652091	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.173913
3	9652104	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.08
3	9652146	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.111111
3	9652154	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9652155	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9652489	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.285714
3	9652498	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.105263
3	9652506	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.1
3	9652538	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.318182
3	9652572	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.181818
3	9652589	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.153846
3	9652812	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.111111
3	9652814	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.222222
3	9652828	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.111111
3	9652857	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.272727
3	9653117	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.181818
3	9653118	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9655059	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.230769
3	9655106	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.461538
3	9656634	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.272727
3	9657829	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.125
3	9658926	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.176471
4	2497841	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.153846
4	2498277	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.3
4	2498388	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.230769
4	2503143	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.6
4	6786542	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.1
4	6826019	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.3
4	6832449	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.157895
4	6838409	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.2
6	3069756	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.6
6	3069757	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.7
6	3070459	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.2
6	7117467	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.230769
6	7119125	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.153846
6	7120374	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.181818
6	7120375	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.363636
6	7120395	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.272727
6	7174734	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.181818
6	7228606	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.166667
6	7228782	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
7	1535193	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.2
7	2534969	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
7	2535914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
7	2536047	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
7	2537331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
7	2537385	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
7	2727558	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.166667
7	2727646	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.7
7	2727785	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.333333
7	2738223	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.210526
7	2738235	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.285714
7	2768996	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.3125
7	2769041	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.153846
7	2769077	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.2
7	2769081	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.2
7	2776867	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.25
7	2779141	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.176471
7	2779238	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.125
7	2779265	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.153846
7	2779394	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.363636
7	2779397	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.166667
7	2779398	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.333333
7	2779458	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.181818
7	2779469	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.6
7	2779746	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.181818
7	2779825	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.2
7	4787237	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.384615
7	4787238	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.692308
7	4787443	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.454545
7	5326578	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.272727
7	5326584	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.9
7	5327097	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.4
7	5709879	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.2
7	5709893	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.153846
7	5709895	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.142857
7	5709925	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.307692
7	5709931	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.142857
7	5709986	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.181818
7	5710115	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.3
7	5710130	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.416667
7	6104179	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
7	6104180	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
7	6104203	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
7	6751920	A->G	+	ENSG00000187953	PMS2CL	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
8	8922461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	5701479	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.2
9	5702815	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.105263
10	6054983	A->G	-	ENSG00000134460	IL2RA	protein_coding	Intergenic	.	.	Alu	0.3
10	6160462	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.2
10	6160463	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.3
10	6206927	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.0645161
10	6212700	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.129032
10	6212709	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.0606061
10	6213265	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.244898
10	6242777	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.2
10	6397214	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
11	3698821	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.363636
11	3698822	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3722704	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.416667
11	3722805	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3740293	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.125
11	3740306	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3740411	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.15
11	3750208	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3750258	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3750284	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3750725	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.3
11	3751296	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3767435	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.153846
11	3790968	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.153846
11	3790981	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.230769
11	3791282	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.272727
11	3791350	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.3
11	3791422	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.25
11	3791426	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3792962	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3793821	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.176471
11	3793857	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.176471
11	3793883	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.277778
11	3794838	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3794924	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.285714
11	3794925	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.214286
11	3795222	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.111111
11	3795415	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	6491553	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.153846
11	9172876	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0666667
11	9172878	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.08
11	9172940	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.105263
11	9174662	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0833333
11	9174669	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0909091
11	9196726	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9196848	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.363636
11	9197054	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.272727
11	9197156	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.117647
11	9197157	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.125
11	9197222	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9197223	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.125
11	9197643	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9197664	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.272727
11	9217414	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9240282	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9245539	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9246512	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9248121	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9248162	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.117647
11	9248191	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.111111
11	9248199	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.125
11	9253076	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.111111
11	9253079	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.111111
11	9253139	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.285714
11	9254202	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9254307	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.307692
11	9255475	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9259784	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9259785	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9261527	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9261560	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.117647
11	9261595	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9261695	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9263250	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.214286
11	9290924	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.25
11	9290992	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9290994	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9291258	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.4
11	9291260	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.4
11	9291274	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.3
11	9291296	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.2
11	9291756	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.272727
11	9292581	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9292590	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.642857
11	9292595	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.428571
11	9292607	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.538462
11	9415095	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.2
11	9415133	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.3
11	9725225	A->G	+	ENSG00000133789	SWAP70	protein_coding	Intergenic	.	.	Alu	0.214286
12	6576165	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.153846
12	6576185	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.214286
12	6576222	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.181818
12	6576428	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.153846
12	6576475	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.181818
12	6576503	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.153846
12	6576510	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.3
12	6577033	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.2
12	6577034	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.142857
12	6577042	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.166667
12	6577048	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.384615
12	6577362	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.2
12	6586472	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.1
12	6586533	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.464286
12	6586638	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.105263
12	6586651	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.105263
12	6586664	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.8
12	6586745	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.25
12	6586773	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.4
12	7923301	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.142857
12	7923836	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0571429
12	7928298	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.181818
12	8542088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
12	8542151	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
12	9649312	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intergenic	.	.	Alu	1
12	9757683	A->G	-	ENSG00000110848	CD69	protein_coding	Intergenic	.	.	Alu	1
12	9758992	A->G	-	ENSG00000110848	CD69	protein_coding	Intergenic	.	.	Alu	0.34375
12	9857816	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.333333
12	9858949	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.384615
12	9858964	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.347826
12	9858969	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.636364
16	2261054	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.142857
16	2261073	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.214286
16	2261089	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.142857
16	3241705	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	3241759	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	3843679	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.416667
16	3843686	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.133333
16	3865693	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.181818
16	4397888	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.272727
17	1450721	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.166667
17	1450764	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.153846
17	1528269	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.2
17	1528278	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.5
17	1585101	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.363636
17	1610336	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.111111
17	1610395	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.166667
17	1610917	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.157895
17	1610938	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.1875
17	1610946	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.1875
17	1610952	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.125
17	1611045	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.181818
17	1611116	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	1611123	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.263158
17	1611390	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.117647
17	1611400	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.416667
17	1611418	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.2
17	1630690	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	1630736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
17	1630748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
17	1630762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	1630781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
17	1631380	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	1631381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	1631442	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	1631549	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	1631550	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	1631576	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	1632498	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	2046696	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	2596804	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.105263
17	2597611	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2597683	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2598212	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2618236	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2672039	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.5
17	4766131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0422535
17	4766170	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0422535
17	4767978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	4767980	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	4768073	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
17	5487377	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.461538
17	8876361	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	8906759	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.173913
17	8906761	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.52381
17	8907161	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.133333
17	8907252	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.1875
17	8907286	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.1
17	8907303	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.157895
17	8917744	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0714286
17	8924171	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.166667
17	8937885	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0882353
17	8937901	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0666667
17	8938070	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.210526
17	8943140	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0740741
17	8943226	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.3
17	8943235	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.105263
17	8943239	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.368421
17	8943367	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.142857
17	8943368	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0857143
17	8943370	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.323529
17	8943374	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.40625
17	8943510	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.391304
17	8943516	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.166667
17	8943559	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0952381
17	8943609	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.125
17	8943661	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.235294
17	8943710	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.235294
17	8943751	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.230769
17	8943771	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.166667
17	8949636	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.225
17	8949695	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.2
17	8949748	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0727273
17	8950584	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0833333
17	8950607	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.09375
17	8950608	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0967742
17	8961572	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.09375
17	8963118	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0666667
17	8963658	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0652174
17	8963666	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0454545
17	8964209	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0465116
18	2660568	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2660599	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.25
18	2660601	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.230769
18	2660754	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.142857
18	2670715	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.142857
18	2670741	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.166667
18	2670742	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.166667
18	2708451	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.117647
18	2708470	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.142857
18	2708514	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.181818
18	2708515	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.363636
18	2708519	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.272727
18	2708667	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2708696	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.35
18	2713565	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.153846
18	2722236	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.25
18	2722275	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
18	2772693	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2850518	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.25
18	2872457	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.125
18	2892931	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.3
18	2897665	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.2
18	2897670	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.2
18	2897817	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.333333
18	3177574	A->G	-	ENSG00000101605	MYOM1	protein_coding	Intergenic	.	.	Alu	0.2
18	8618590	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.153846
18	9110532	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.176471
18	9110691	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.0666667
18	9111397	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.304348
18	9111400	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.136364
18	9111828	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.545455
18	9141998	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0666667
18	9142720	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.210526
18	9142727	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.235294
18	9143479	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.157895
18	9143480	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.157895
18	9143560	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.136364
18	9143600	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.210526
18	9143671	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9143672	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.357143
18	9145278	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.111111
18	9146428	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0909091
18	9153069	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9153081	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.176471
18	9198630	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0967742
18	9198649	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.228571
18	9198650	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.222222
18	9198667	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.305556
18	9198689	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.166667
18	9198730	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.28
18	9198733	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0416667
18	9198767	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.037037
18	9198781	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0350877
18	9198792	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0526316
18	9198798	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.285714
18	9199054	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.25
18	9199059	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.333333
18	9199060	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.296296
18	9199064	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.185185
18	9199111	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.173913
18	9199136	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.227273
18	9199173	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0714286
18	9199174	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0714286
18	9223164	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.333333
18	9247230	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.153846
18	9711467	A->G	+	ENSG00000168461	RAB31	protein_coding	Intergenic	.	.	Alu	0.181818
19	1078526	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.32
19	1078534	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0769231
19	1078594	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0869565
19	1078600	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.2
19	1079239	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.357143
19	1079245	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.142857
19	1079246	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.285714
19	1079382	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.307692
19	1079389	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.142857
19	2069421	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
19	2069422	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	2077142	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.25
19	2077183	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0833333
19	2077209	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.136364
19	2077234	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.15
19	2077251	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.111111
19	2077274	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.105263
19	2077302	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.125
19	2077319	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.125
19	2077320	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.133333
19	2077814	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.272727
19	2077857	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.25
19	2077961	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.166667
19	2077984	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.4
19	2167799	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.166667
19	2167816	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.181818
19	2167829	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.307692
19	2167915	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.142857
19	2168235	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.181818
19	2168285	A->G	-	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.166667
19	2168286	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.166667
19	2168815	A->G	-	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.09375
19	2170060	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.136364
19	2171056	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.272727
19	2205793	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.2
19	2206137	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.647059
19	2206180	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.2
19	2206183	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.214286
19	3647690	A->G	-	ENSG00000186111	PIP5K1C	protein_coding	Intergenic	.	.	Alu	0.461538
19	3758456	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.166667
19	3758531	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.2
19	3758532	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.266667
19	3758538	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.230769
19	3759153	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.4
19	3759172	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.153846
19	3759177	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.333333
19	4565401	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	5596391	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.3125
19	5596392	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.125
19	5596411	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.157895
19	5596469	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.153846
19	6830138	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.181818
19	6830139	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.2
19	6830159	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.571429
19	6830176	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.1875
19	6830188	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.111111
19	6830198	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.352941
19	6830248	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.25
19	6830465	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.142857
19	6830520	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.466667
19	6830533	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.142857
19	6830540	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.933333
19	6830543	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.3125
19	6830832	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.6
19	6830833	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.7
19	6830838	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.2
19	6830902	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.142857
19	6830906	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.5
19	6830924	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.1875
19	6830941	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.133333
19	6830971	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.5
19	6831017	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.857143
19	6904688	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.133333
19	6904691	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.266667
19	6904705	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.214286
19	6904713	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.473684
19	6905083	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.230769
19	6905087	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.230769
19	6905089	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.461538
19	6905090	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.923077
19	6905128	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.181818
19	6905137	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.2
19	6905141	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.2
19	6905433	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.5
19	6905453	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.142857
19	6905454	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.428571
19	6905470	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.333333
19	6905486	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.333333
19	6905492	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.5
19	6905514	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.428571
19	6905536	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.8125
19	6905550	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.357143
19	6905563	A->G	+	ENSG00000174837	ADGRE1	protein_coding	Intergenic	.	.	Alu	0.285714
19	8473150	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.2
19	8517850	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
19	8517862	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
19	8517863	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
19	8517920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	8517928	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	8517938	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
19	8517959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
19	8518028	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
19	8518033	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
19	8518047	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
19	8518102	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
19	8519633	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	8519802	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	8520432	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
19	8540475	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.636364
20	2117457	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.3
20	2117459	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.727273
20	2117645	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.3
20	2210593	A->G	-	ENSG00000226644	AL121899.1	lincRNA	Intergenic	.	.	Alu	0.181818
20	3151020	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.3
20	3960621	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.4
20	3961149	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.416667
20	3961157	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.75
20	3961158	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.333333
20	3961184	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.105263
20	3961208	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.409091
20	3961210	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.0869565
20	3961229	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.0952381
20	3961253	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.176471
20	3961254	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.117647
20	3961302	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.388889
20	3961319	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.166667
20	3961325	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.125
20	3961339	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.125
20	3961340	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.125
20	3961341	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.133333
20	3962234	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.133333
20	3962244	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.266667
20	3962294	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.428571
20	3962787	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.592593
20	3962807	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.172414
20	3962808	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.0666667
20	3962838	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.192308
20	3962839	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.115385
20	3962861	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.136364
20	3962865	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.363636
20	3962868	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.0952381
20	3962894	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.416667
20	3962902	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.263158
20	3962933	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.166667
20	3962938	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.466667
20	3962965	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.125
20	3963235	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.136364
20	3963245	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.08
20	3963285	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.0952381
20	3963330	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.0714286
20	3963394	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.1
20	3963482	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.166667
20	4320348	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0408163
20	4794702	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.111111
20	4803671	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	4803726	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.272727
20	4820302	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.0740741
20	5555354	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5562465	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0645161
20	5563079	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5563094	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.115385
20	5564779	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0487805
20	5572947	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.25
20	5573016	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.238095
20	5573031	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.1
20	5573178	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.107143
20	5573622	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.25
20	5573681	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0857143
20	5573686	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.147059
20	5573693	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0571429
20	5573695	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0555556
20	5573709	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0526316
20	5577161	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.214286
20	5577162	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5577293	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.363636
20	5579459	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.185185
20	5579566	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5580536	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.4375
20	5581011	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.176471
20	5581014	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.294118
20	5581073	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.1
20	5581150	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5581151	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.1875
20	5587492	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.111111
20	5587516	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.136364
20	5587539	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0769231
20	5587562	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5587571	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5587572	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5587595	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5587645	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.15
20	5588749	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5588773	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0625
20	5588806	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0869565
20	5589367	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.09375
20	5589439	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0384615
20	5589446	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0740741
20	5589512	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5589525	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.03125
20	5589536	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0483871
20	5590353	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.1
20	5590388	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0425532
20	5599651	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.3
20	5600868	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5601080	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	5601136	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5601246	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.157895
20	5601628	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.216216
20	5601660	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0689655
20	5603875	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	8181908	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
21	5103491	A->G	+	ENSG00000280071	GATD3B	protein_coding	Intergenic	.	.	Alu	0.3
21	8218777	A->G	-	ENSG00000278996	FP671120.1	lincRNA	Intergenic	.	.	Alu	1
21	8446047	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	10263104	A->G	+	ENSG00000054523	KIF1B	protein_coding	Intergenic	.	.	Alu	0.0714286
1	10263164	A->G	+	ENSG00000054523	KIF1B	protein_coding	Intergenic	.	.	Alu	0.0697674
1	11020869	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.1875
1	12256127	A->G	+	ENSG00000048707	VPS13D	protein_coding	Intergenic	.	.	Alu	0.25
1	12256128	A->G	+	ENSG00000048707	VPS13D	protein_coding	Intergenic	.	.	Alu	0.181818
1	13767748	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.266667
1	13767765	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.285714
1	13767811	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.2
1	13767823	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.125
1	13767824	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.1875
1	13767854	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.705882
1	13767864	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.111111
1	13767868	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.611111
1	13767881	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.125
1	13767896	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.157895
1	13767901	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.526316
1	13767931	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.4375
1	13768480	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.133333
1	13768545	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.181818
1	13768612	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.230769
1	15489911	A->G	-	ENSG00000215704	CELA2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	15490623	A->G	-	ENSG00000215704	CELA2B	protein_coding	Intergenic	.	.	Alu	0.2
1	16373330	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.272727
1	16514093	A->G	-	.	.	.	Intergenic	.	.	Alu	0.692308
1	16896330	A->G	+	ENSG00000058453	CROCC	protein_coding	Intergenic	.	.	Alu	0.188679
1	17414454	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.176471
1	17414724	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.15
1	17414737	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.117647
1	17414743	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.117647
1	17414889	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.307692
1	17414892	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.185185
1	17415487	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.125
1	17415548	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.4
1	17415627	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	20756848	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	21139815	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.363636
1	21145560	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.4
1	21148639	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21161906	A->G	-	ENSG00000235112	HSPE1P27	processed_pseudogene	Intergenic	.	.	Alu	0.2
1	21164769	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.142857
1	21166664	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.5
1	21167744	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21168995	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21173564	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21173566	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.3
1	21173576	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.363636
1	21173588	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.166667
1	21303877	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.2
1	21303917	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.3
1	21303918	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.2
1	21323548	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.2
1	21323885	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.2
1	21331140	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.2
1	22059061	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.181818
1	22062013	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.2
1	22062075	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.153846
1	22073889	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0869565
1	22083416	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.125
1	22083447	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.25
1	22083450	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.3
1	22083452	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.3
1	23327437	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.272727
1	23328898	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23337415	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.2
1	25449554	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.181818
1	25456098	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.2
1	25456167	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.2
1	26716895	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26777115	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.272727
1	26882165	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.2
1	26883928	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.25
1	27627773	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.181818
1	27627791	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.153846
1	27627808	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.142857
1	27874144	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.193548
1	27874149	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.103448
1	27874219	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.179487
1	27874244	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.45
1	27874255	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.352941
1	27874270	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.214286
1	27874297	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	27874303	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.363636
1	27874309	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.08
1	27874372	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.310345
1	27874383	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0666667
1	27874385	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.111111
1	27874386	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.107143
1	27874526	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.35
1	27874527	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.25
1	27874549	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	27874553	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	27874580	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	27874595	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27874639	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1875
1	27874661	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27874675	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.375
1	27874768	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	27874834	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0943396
1	27874837	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0588235
1	27874859	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27874873	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.155172
1	27874876	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.152542
1	27875078	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0307692
1	27875079	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0454545
1	27875083	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0294118
1	27875840	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.153846
1	27875842	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.047619
1	27875962	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0350877
1	27875964	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0535714
1	27880215	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0882353
1	27880241	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.821429
1	27880247	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0625
1	27880253	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.225806
1	27880278	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.208333
1	27880285	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27880302	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.36
1	27880314	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	27880324	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27880351	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.133333
1	27880366	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.263158
1	27880369	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	27880372	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	27880391	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.428571
1	27880395	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.344828
1	27880447	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.102564
1	27880531	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0862069
1	27880610	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.214286
1	27880611	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0363636
1	27880625	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0555556
1	27880647	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.108696
1	27880651	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.113636
1	27880666	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.139535
1	27880676	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.176471
1	27880683	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	27880702	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.583333
1	27880736	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27880766	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	27880818	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1875
1	27880829	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.37037
1	27880832	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.433333
1	27880871	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.416667
1	27880878	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.238095
1	27880882	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.08
1	27880907	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27880917	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27881009	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27881040	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.210526
1	27881196	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.5
1	27881263	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.3
1	27881383	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27881421	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0888889
1	27881737	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27887938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	27887971	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
1	27888033	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
1	27888040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
1	27888149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	27888379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
1	28172058	A->G	-	ENSG00000169403	PTAFR	protein_coding	Intergenic	.	.	Alu	0.3
1	28329562	A->G	+	ENSG00000130772	MED18	protein_coding	Intergenic	.	.	Alu	0.0952381
1	28330008	A->G	+	ENSG00000130772	MED18	protein_coding	Intergenic	.	.	Alu	0.235294
1	29174838	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.4
1	29175247	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.1
1	29175301	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.25
1	29175304	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.1875
1	29175305	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.411765
1	30743974	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.285714
1	30743975	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.333333
1	30999092	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.454545
1	30999103	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	30999117	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.3
1	30999231	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.294118
1	31026225	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.357143
1	35949734	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.333333
1	35977467	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.0909091
1	35977505	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.111111
1	35978454	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.142857
1	36362990	A->G	-	ENSG00000196182	STK40	protein_coding	Intergenic	.	.	Alu	0.0526316
1	36478588	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.25
1	37547693	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.230769
1	37547703	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	38995884	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.2
1	38995923	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.333333
1	38995954	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.357143
1	38995966	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.333333
1	38996781	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.142857
1	39000584	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
1	40205268	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.272727
1	40205291	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.2
1	40229727	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.2
1	40378194	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.210526
1	40378204	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.105263
1	40378241	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	40378527	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.125
1	40393711	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.166667
1	40398330	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	40398724	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.2
1	40402579	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.384615
1	40402631	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.133333
1	44433007	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.545455
1	44433085	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.25
1	44433130	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44433761	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44433768	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44433776	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44435765	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44449623	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	45658700	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45659477	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.545455
1	46593296	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intergenic	.	.	Alu	0.153846
1	46593309	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intergenic	.	.	Alu	0.8
1	46593358	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intergenic	.	.	Alu	0.285714
1	46593396	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intergenic	.	.	Alu	0.153846
1	51246360	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.181818
1	51246375	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.181818
1	51246393	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	52066242	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.307692
1	52409347	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.416667
1	52409349	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.166667
1	62449044	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	64940444	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.307692
1	64940948	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.333333
1	64941052	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.181818
1	66964553	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.181818
1	70210401	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.2
1	70210409	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.2
1	70210510	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.4
1	70210529	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.181818
1	70304671	A->G	-	ENSG00000118454	ANKRD13C	protein_coding	Intergenic	.	.	Alu	0.272727
1	70304672	A->G	-	ENSG00000118454	ANKRD13C	protein_coding	Intergenic	.	.	Alu	0.272727
1	77676367	A->G	-	ENSG00000036549	AC118549.1	protein_coding	Intergenic	.	.	Alu	0.133333
1	77950259	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	88885300	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	89535420	A->G	+	ENSG00000197147	LRRC8B	protein_coding	Intergenic	.	.	Alu	0.3
1	89535421	A->G	+	ENSG00000197147	LRRC8B	protein_coding	Intergenic	.	.	Alu	0.2
1	89642646	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.117647
1	89642666	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.157895
1	89642728	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.125
1	89642938	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.416667
1	89643148	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.235294
1	89643204	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0833333
1	89643239	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0869565
1	89643283	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0952381
1	90914628	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
1	90914666	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
1	90954653	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.181818
1	90966595	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.2
1	90970834	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.142857
1	90970837	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.142857
1	90970917	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.4
1	90972037	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.16
1	90972038	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0769231
1	90974282	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.111111
1	90974283	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.117647
1	90984347	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.3
1	91012395	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.235294
1	91012396	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.235294
1	93155750	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.0909091
1	93155764	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.318182
1	93157575	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.08
1	93157576	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.12
1	93158647	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.14
1	93158668	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.0363636
1	93158735	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.0425532
1	93158747	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.0444444
1	93158750	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.142857
1	93158761	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.0512821
1	96800587	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.136364
2	10308931	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.608696
2	10308947	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	10308960	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.684211
2	10309168	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.461538
2	10309311	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	10309318	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.111111
2	10320282	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.846154
2	10320283	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.923077
2	10320394	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.3
2	10320540	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.227273
2	10320546	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.368421
2	10320554	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.25
2	10321165	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.235294
2	10321246	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.166667
2	10334433	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.266667
2	10334453	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.285714
2	10334729	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.153846
2	10334779	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.636364
2	10334786	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.454545
2	10334938	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.214286
2	16591516	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.176471
2	16592731	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.266667
2	16607734	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.0512821
2	16607735	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.075
2	16607790	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.0465116
2	16607792	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.047619
2	16611283	A->G	-	ENSG00000197872	FAM49A	protein_coding	Intergenic	.	.	Alu	0.111111
2	20038536	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.153846
2	20038599	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.0869565
2	20045464	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.166667
2	20271434	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20271478	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20271481	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20271482	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.136364
2	20271979	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20272047	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20272076	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.157895
2	20272083	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.277778
2	20292759	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20292766	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20292803	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.454545
2	20292807	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.153846
2	20292867	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20335204	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.153846
2	20336285	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.153846
2	20343753	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.5
2	20343754	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20344284	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.117647
2	20344334	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.35
2	20345796	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.133333
2	20345809	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.105263
2	20345836	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.363636
2	20345865	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	23794081	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23794134	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23829633	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
2	23829655	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	23829673	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.142857
2	23829699	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.266667
2	23829734	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	23830251	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23830256	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.266667
2	23830270	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.545455
2	23848299	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23849641	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.333333
2	23849649	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.333333
2	23849684	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23849813	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.307692
2	24257225	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.181818
2	24257244	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.1875
2	24260140	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	24347993	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.3
2	26039120	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.153846
2	26040439	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.133333
2	26064937	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.181818
2	26064938	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.181818
2	26064983	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.2
2	28758158	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0689655
2	28759747	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28759824	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28761042	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28761066	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28784738	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28785204	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28785214	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.230769
2	28785583	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28785702	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28786139	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.285714
2	28786194	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28786207	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.136364
2	28786255	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28786361	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28789243	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0588235
2	28789249	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.257143
2	28789257	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0857143
2	28789291	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.193548
2	28789292	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0689655
2	28789356	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28789429	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.25
2	28789434	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.473684
2	28789464	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.285714
2	28789491	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28789497	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.173913
2	28789679	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.384615
2	28789692	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.333333
2	28789698	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.375
2	28789699	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28789728	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28789738	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28789740	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28789782	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.533333
2	28789828	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0465116
2	28789833	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28789834	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.266667
2	28789849	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0408163
2	28789873	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0384615
2	28790025	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28790026	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.108696
2	28790052	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.04
2	28790066	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.180328
2	28790103	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0357143
2	28790104	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0344828
2	28790130	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0714286
2	28790133	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0892857
2	28790165	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0344828
2	28790191	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0392157
2	28790201	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28790206	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28790213	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.229167
2	28790238	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.15
2	28790433	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.244898
2	28790439	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28790440	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.25
2	28790457	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.09375
2	28790479	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28790505	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.102564
2	28790574	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0930233
2	28790601	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0512821
2	28790602	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	32505871	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	32505948	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0555556
2	32505974	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0645161
2	32507342	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0769231
2	32508883	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.25
2	32508892	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.307692
2	32508921	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32508937	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.230769
2	32509349	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.363636
2	32509355	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32509356	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.5
2	32509407	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.4
2	32509420	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.272727
2	32509452	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32509477	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.125
2	38307496	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.166667
2	38307522	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.333333
2	38307533	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.571429
2	39105352	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39105376	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39105396	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	39284259	A->G	-	ENSG00000011566	MAP4K3	protein_coding	Intergenic	.	.	Alu	0.166667
2	39284264	A->G	-	ENSG00000011566	MAP4K3	protein_coding	Intergenic	.	.	Alu	0.357143
2	39284433	A->G	-	ENSG00000011566	MAP4K3	protein_coding	Intergenic	.	.	Alu	0.307692
2	39284434	A->G	-	ENSG00000011566	MAP4K3	protein_coding	Intergenic	.	.	Alu	0.230769
2	39284436	A->G	-	ENSG00000011566	MAP4K3	protein_coding	Intergenic	.	.	Alu	0.307692
2	39775059	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.125
2	39775062	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.125
2	39775077	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.181818
2	39775243	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.181818
2	42176855	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.333333
2	42176894	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.222222
2	42176897	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.125
2	42176974	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.111111
2	42177437	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42177476	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.272727
2	42177508	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.153846
2	42178361	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42188360	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.333333
2	42189397	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.142857
2	42191882	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	42191888	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42191889	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42191975	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.272727
2	42191978	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42192514	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.428571
2	42192520	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	42258530	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42258540	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42268623	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42268706	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.1
2	42268714	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.1
2	42277698	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42278748	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42282506	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.363636
2	42282533	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42282569	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.272727
2	42291533	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42293243	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.4
2	42293870	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42294446	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42307794	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42307835	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.153846
2	42308383	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42308389	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	44210296	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.2
2	44215397	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.2
2	44228968	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.3
2	46567543	A->G	+	ENSG00000119729	RHOQ	protein_coding	Intergenic	.	.	Alu	0.153846
2	46947460	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.2
2	46953417	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.166667
2	46991452	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.2
2	47168573	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.125
2	47810225	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.5
2	47823956	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.125
2	47828526	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47828533	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47831323	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3
2	47836204	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.307692
2	47836263	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.117647
2	47836507	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.25
2	47874105	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3
2	47890574	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.105263
2	48368008	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.2
2	48368419	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.6
2	48368420	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.636364
2	48368463	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.6
2	48368464	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.2
2	53780576	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.181818
2	53780634	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.181818
2	53871763	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.176471
2	53871766	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.133333
2	53871770	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.133333
2	53871831	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.285714
2	53871859	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53871879	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.214286
2	53871914	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0869565
2	53871931	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.277778
2	53874059	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.25
2	53874060	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.272727
2	53874197	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0869565
2	53890503	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.25
2	53890506	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.545455
2	53890944	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.25
2	53899143	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.214286
2	53899154	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.125
2	53899213	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.25
2	53899661	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53899686	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.105263
2	53899755	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.181818
2	53899756	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0869565
2	53900308	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.176471
2	53904823	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53905453	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.5
2	53929083	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0645161
2	53929104	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0588235
2	53929158	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.238095
2	53929444	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.130435
2	53929522	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.103448
2	53952502	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53966465	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.4
2	53966470	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53966490	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53966496	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.333333
2	54979146	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.25
2	54979151	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	54979191	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.125
2	54988234	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.230769
2	54988235	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	54991068	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.3
2	55011286	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.157895
2	55016471	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.0740741
2	55032259	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	55032262	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.142857
2	55032316	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.105263
2	55032334	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.285714
2	55032874	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.125
2	55034488	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.307692
2	55375133	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.384615
2	55375139	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.153846
2	55375140	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.230769
2	55375205	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.166667
2	60897433	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.222222
2	60897745	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0967742
2	60897785	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.411765
2	60897795	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.461538
2	60903557	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.1
2	60903705	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.1
2	60903736	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.121212
2	60903783	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.05
2	60903805	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.121951
2	60903807	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.111111
2	60903869	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.230769
2	60904202	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60904214	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0769231
2	60904217	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.125
2	60904225	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.185185
2	60904291	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0952381
2	60904472	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.470588
2	60904473	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.117647
2	60904654	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0869565
2	60904783	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.136364
2	60904796	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0909091
2	60904835	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0588235
2	60905301	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.6
2	60905316	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.166667
2	60905346	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.181818
2	60907369	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.176471
2	60907513	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.136364
2	60907519	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.333333
2	60907550	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60907575	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.1
2	60907824	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.384615
2	60907883	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.222222
2	60907899	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.153846
2	60907953	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.128205
2	60909552	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.189189
2	60909554	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0526316
2	60909656	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.125
2	60909692	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0447761
2	60932249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
2	60934762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
2	60934955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	60934958	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	60934963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.692308
2	60935321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.347826
2	60935377	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
2	60935459	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	60935519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
2	60935733	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	60935772	A->G	+	.	.	.	Intergenic	.	.	Alu	0.26087
2	61361208	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.4
2	61361219	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.272727
2	61369597	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.153846
2	64017254	A->G	-	ENSG00000143952	VPS54	protein_coding	Intergenic	.	.	Alu	0.2
2	64136795	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	64138216	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.04
2	64564907	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.2
2	65091623	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0869565
2	65091650	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65091674	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.529412
2	65091724	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0833333
2	65091748	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.173913
2	65092093	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65092151	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.315789
2	65092207	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.12
2	65092213	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.357143
2	65094189	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.25
2	65094197	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.307692
2	65094212	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.454545
2	65094368	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65094422	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.45
2	65094428	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.4
2	65094472	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65094508	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.12
2	65095645	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65095755	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65095844	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.157895
2	65095846	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.157895
2	65107590	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65108001	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65108002	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65112244	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65123623	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65123678	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65123686	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65123731	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.214286
2	65127680	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.3
2	65229574	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.136364
2	65230799	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.157895
2	65230804	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.1
2	65230825	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65252820	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.181818
2	65252844	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.166667
2	68207990	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.181818
2	68207993	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.153846
2	68212177	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.153846
2	68212263	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.230769
2	69928625	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.047619
2	69928792	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0227273
2	69928973	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0547945
2	69928974	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.136986
2	69929012	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0588235
2	70017172	A->G	-	ENSG00000179818	PCBP1-AS1	processed_transcript	Intergenic	.	.	Alu	0.363636
2	70017263	A->G	-	ENSG00000179818	PCBP1-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
2	73754837	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
2	74011856	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.2
2	74012195	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.454545
2	74012196	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.363636
2	74185761	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	85047835	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.307692
2	85323098	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.6
2	85323102	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.230769
2	85323374	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.5
2	85609908	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.454545
2	86446945	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.384615
2	86562452	A->G	-	ENSG00000228363	AC015971.1	antisense	Intergenic	.	.	Alu	0.272727
2	87460372	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.277778
2	87460378	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.375
2	87466476	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.6
2	88595044	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.166667
2	88595058	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.181818
2	88611768	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.333333
2	88611769	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.285714
2	96127793	A->G	-	ENSG00000188886	ASTL	protein_coding	Intergenic	.	.	Alu	0.272727
2	96275949	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.2
2	96545210	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.545455
2	96545220	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.214286
2	96545221	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.285714
2	96545226	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.333333
2	96545257	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.117647
2	96624949	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	96624962	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.181818
2	96625022	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.272727
2	96628433	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.266667
2	96632635	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.5
2	97828089	A->G	+	ENSG00000075568	TMEM131	protein_coding	Intergenic	.	.	Alu	1
2	97978562	A->G	-	ENSG00000075568	TMEM131	protein_coding	Intergenic	.	.	Alu	0.181818
2	97978567	A->G	-	ENSG00000075568	TMEM131	protein_coding	Intergenic	.	.	Alu	0.181818
2	98463102	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.363636
2	98463104	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.272727
2	99401977	A->G	+	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.272727
3	10152240	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
3	10152289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0517241
3	10152619	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
3	10152985	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
3	10172952	A->G	-	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.363636
3	10173565	A->G	-	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	10175379	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.166667
3	10175388	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.142857
3	10175395	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.357143
3	10175512	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.454545
3	10175529	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.3
3	10182952	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.2
3	10182972	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	10183040	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	10208819	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.363636
3	10208824	A->G	+	ENSG00000134070	IRAK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	10281409	A->G	+	ENSG00000272410	AC022384.1	protein_coding	Intergenic	.	.	Alu	0.2
3	12295689	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.142857
3	12296027	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.266667
3	12296037	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.0714286
3	12296096	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.35
3	12296099	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.142857
3	12296167	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.151515
3	12296172	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.352941
3	12296173	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.15625
3	12332913	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.117647
3	12347129	A->G	+	ENSG00000132170	PPARG	protein_coding	Intergenic	.	.	Alu	0.266667
3	12597799	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.428571
3	12597803	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.285714
3	12624032	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12624033	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12647548	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.166667
3	12950550	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.222222
3	12950781	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.3
3	12950918	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.416667
3	12950925	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.363636
3	12951366	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.153846
3	12998827	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.137931
3	12998856	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.2
3	12998901	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.157895
3	12998914	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.315789
3	12998917	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.15
3	12999624	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.666667
3	12999705	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.142857
3	12999731	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.185185
3	12999732	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.888889
3	13001003	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.714286
3	13001012	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	13001019	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	13001062	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.125
3	13001942	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.214286
3	13002021	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.0967742
3	13002028	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.117647
3	13002035	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.0571429
3	13002037	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.5
3	13002042	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.617647
3	13002465	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.125
3	13002487	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.153846
3	15306915	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.3
3	15311321	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.3
3	15311415	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.166667
3	15311418	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.25
3	15311473	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.384615
3	15311478	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.4
3	15311682	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.125
3	15311713	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.111111
3	15311771	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.153846
3	15311812	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.166667
3	15311842	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.2
3	15311852	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.166667
3	15311856	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.166667
3	15311902	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.125
3	15311943	A->G	-	ENSG00000131370	SH3BP5	protein_coding	Intergenic	.	.	Alu	0.133333
3	15721866	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.272727
3	15773539	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0689655
3	19949482	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.153846
3	19951544	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0487805
3	19951545	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0465116
3	19951547	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0487805
3	19954781	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0833333
3	19962513	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.181818
3	19962985	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.2
3	19974210	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.2
3	19974255	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.181818
3	19974256	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.272727
3	19979413	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.2
3	19979423	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.272727
3	19979467	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.133333
3	19979492	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.181818
3	19983215	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.125
3	20046326	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.2
3	20046353	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.181818
3	23225973	A->G	+	ENSG00000182247	UBE2E2	protein_coding	Intergenic	.	.	Alu	0.0952381
3	23225979	A->G	+	ENSG00000182247	UBE2E2	protein_coding	Intergenic	.	.	Alu	0.0465116
3	23226009	A->G	+	ENSG00000182247	UBE2E2	protein_coding	Intergenic	.	.	Alu	0.0512821
3	23248999	A->G	+	ENSG00000182247	UBE2E2	protein_coding	Intergenic	.	.	Alu	0.3
3	23262378	A->G	+	ENSG00000182247	UBE2E2	protein_coding	Intergenic	.	.	Alu	0.181818
3	23262478	A->G	+	ENSG00000182247	UBE2E2	protein_coding	Intergenic	.	.	Alu	0.181818
3	23262501	A->G	+	ENSG00000182247	UBE2E2	protein_coding	Intergenic	.	.	Alu	0.5
3	23823106	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.111111
3	23832566	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23832775	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.153846
3	23832914	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.214286
3	23832979	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	23838167	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23838168	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23838171	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.434783
3	23838210	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	23839370	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.117647
3	23839379	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.214286
3	23839385	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23839389	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.105263
3	23839390	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23848200	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23848293	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.214286
3	23848398	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23848415	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.25
3	23848420	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.461538
3	23848449	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.416667
3	23850761	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23850767	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23852707	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23852712	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23854002	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.08
3	27474671	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.3
3	28334014	A->G	-	ENSG00000163512	AZI2	protein_coding	Intergenic	.	.	Alu	0.272727
3	30621481	A->G	+	ENSG00000163513	TGFBR2	protein_coding	Intergenic	.	.	Alu	0.181818
3	31608839	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.363636
3	31608853	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	32564278	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.2
3	33429414	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	33435603	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.384615
3	33805884	A->G	+	ENSG00000170248	PDCD6IP	protein_coding	Intergenic	.	.	Alu	0.272727
3	33810967	A->G	+	ENSG00000170248	PDCD6IP	protein_coding	Intergenic	.	.	Alu	0.230769
3	33810982	A->G	+	ENSG00000170248	PDCD6IP	protein_coding	Intergenic	.	.	Alu	0.166667
3	33810990	A->G	+	ENSG00000170248	PDCD6IP	protein_coding	Intergenic	.	.	Alu	0.272727
3	33811003	A->G	+	ENSG00000170248	PDCD6IP	protein_coding	Intergenic	.	.	Alu	0.3
3	37072250	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.307692
3	37173076	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.047619
3	37173341	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.214286
3	37272524	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	37279862	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.2
3	38136472	A->G	-	ENSG00000060971	ACAA1	protein_coding	Intergenic	.	.	Alu	0.3
3	39058151	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.2
3	39063681	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.842105
3	39063711	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.222222
3	39063798	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.157895
3	39063827	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.25
3	39063906	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.352941
3	39063908	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.166667
3	39064392	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.3
3	39064441	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.363636
3	39064503	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.181818
3	39064549	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.3
3	41210276	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0408163
3	41210333	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0545455
3	41210360	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	41210374	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.204545
3	41210375	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.148936
3	41210821	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.108108
3	41210890	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0465116
3	41210902	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.292683
3	41210929	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.2
3	41211031	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0363636
3	43293798	A->G	+	ENSG00000163788	SNRK	protein_coding	Intergenic	.	.	Alu	0.526316
3	47090555	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.153846
3	47090585	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.153846
3	47688128	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.133333
3	47688136	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.384615
3	48692006	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48692010	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.272727
3	48692011	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.454545
3	48698856	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.214286
3	48699153	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48699184	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.363636
3	48704589	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.3
3	48923640	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.363636
3	48923687	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
3	48923688	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
3	48923952	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.272727
3	48924023	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.166667
3	48935348	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.365385
3	48936532	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.05
3	49074010	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49322616	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.333333
3	49322617	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.25
3	49322669	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49344170	A->G	-	.	.	.	Intergenic	.	.	Alu	0.409091
3	49344552	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
3	49344558	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
3	49344613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
3	49360530	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.3
3	49373087	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.181818
3	49778387	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.5
3	49782637	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49782689	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.230769
3	49782695	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.5
3	49783603	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49784562	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.636364
3	49784563	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49784582	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.25
3	49784601	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.25
3	50093091	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.3
3	50096220	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50096305	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.230769
3	50096702	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.111111
3	50096708	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.117647
3	50096720	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.333333
3	50096809	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.363636
3	50096875	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.111111
3	50098649	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.214286
3	50098702	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50098716	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	51551933	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.133333
3	52268997	A->G	-	ENSG00000164091	WDR82	protein_coding	Intergenic	.	.	Alu	0.3
3	53308896	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.166667
3	53309597	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.2
3	53884104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
3	53884162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
3	56665495	A->G	-	ENSG00000163946	FAM208A	protein_coding	Intergenic	.	.	Alu	0.2
3	56795744	A->G	-	ENSG00000163947	ARHGEF3	protein_coding	Intergenic	.	.	Alu	0.0294118
3	57579985	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.5
3	57579989	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.153846
3	57591563	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57591591	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.181818
3	57592296	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.333333
3	57592304	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.363636
3	57592306	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57594363	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.190476
3	57683973	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.181818
3	57684859	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.2
3	57684860	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.2
3	57816175	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.6
3	58426565	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	58426570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
3	58426606	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	58426611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.473684
3	58426621	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	58426651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	58426998	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	58427044	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	58427105	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
3	58427128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	58427398	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
3	58427417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
3	58427425	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	58427426	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
3	58427528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
3	58427533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	58427534	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
3	66283380	A->G	+	ENSG00000144741	SLC25A26	protein_coding	Intergenic	.	.	Alu	0.181818
3	66286719	A->G	+	ENSG00000144741	SLC25A26	protein_coding	Intergenic	.	.	Alu	0.142857
3	70961826	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.142857
3	71102958	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	72416084	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0909091
3	72435210	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.230769
3	72436099	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.111111
3	72440089	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.35
3	73001534	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.230769
3	73002272	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.3
3	73002423	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.166667
4	15623961	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.0363636
4	15624004	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.0333333
4	15635528	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.125
4	16220583	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.142857
4	16220586	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.4
4	16220637	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.4
4	16220640	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.125
4	16220654	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.166667
4	16220933	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.2
4	26327725	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.166667
4	26328645	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.181818
4	26328680	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.166667
4	26328682	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.166667
4	26336569	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.272727
4	26336570	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.181818
4	26367391	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.272727
4	26375048	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.230769
4	26378812	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.142857
4	26378905	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.5
4	26378906	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.357143
4	26379249	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.545455
4	26379259	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.3
4	26379333	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.176471
4	26379739	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.214286
4	26379740	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.133333
4	26379811	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.444444
4	26379815	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.166667
4	26398673	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.166667
4	26398683	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.166667
4	26940068	A->G	+	ENSG00000109689	STIM2	protein_coding	Intergenic	.	.	Alu	0.3
4	38686189	A->G	+	ENSG00000109787	KLF3	protein_coding	Intergenic	.	.	Alu	0.111111
4	39048737	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.363636
4	39701838	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.105263
4	39702022	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.111111
4	39702023	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.148148
4	39703130	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.272727
4	39703132	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39720861	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39909262	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	48142954	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.181818
4	48144133	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.2
4	48144201	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.2
4	48385782	A->G	+	ENSG00000109171	SLAIN2	protein_coding	Intergenic	.	.	Alu	0.153846
4	54030461	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.2
4	54048186	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.0606061
4	67474162	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.166667
4	67474314	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.6
4	67474447	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.384615
4	67474532	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.142857
4	67474586	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.3
4	67474598	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.5
4	67474615	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.8
4	67483346	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.181818
4	67517621	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.125
4	67517687	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.3
4	68317038	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	68317210	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.0882353
4	68326620	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	68326624	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.111111
4	68326667	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.157895
4	68326683	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	1
4	68326696	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.181818
4	68326719	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.181818
4	68327153	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.583333
4	68327154	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.181818
4	68327176	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.153846
4	68327179	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.166667
4	68327205	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.153846
4	68327233	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.366667
4	68327235	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.166667
4	70829532	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.272727
4	70829559	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	73240422	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.571429
4	74374485	A->G	+	ENSG00000124882	EREG	protein_coding	Intergenic	.	.	Alu	0.025974
4	74450318	A->G	+	ENSG00000109321	AREG	protein_coding	Intergenic	.	.	Alu	0.383562
4	75663420	A->G	-	ENSG00000138757	G3BP2	protein_coding	Intergenic	.	.	Alu	0.2
4	77778426	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.181818
4	77778491	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.25
4	77790915	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.3
4	77791153	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.375
4	77791156	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.357143
4	77791166	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.142857
4	77796959	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.133333
4	77796961	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.2
4	77796975	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.210526
4	77817074	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.434783
4	79954245	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.222222
4	79954269	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.25
4	79954270	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.1875
4	79954494	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.125
4	79954510	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.25
4	80019147	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.153846
4	81448857	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0491803
4	81448911	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.05
4	81450273	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0566038
4	81450283	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0731707
4	81450481	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0425532
4	81450801	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0666667
4	81450803	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0416667
4	81450837	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0338983
4	81450841	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0666667
4	82835695	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.153846
4	82896587	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.307692
4	82896647	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.318182
4	83541300	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.166667
4	83541497	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.2
4	83545239	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.3
4	83545289	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.133333
4	83545294	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.142857
4	83546205	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.230769
4	83546206	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.166667
4	83546207	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.166667
4	83568753	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.2
4	83568779	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.25
4	83585672	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.3
4	84963227	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.3
4	84963231	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.3
4	84964772	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.363636
4	84964773	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.363636
4	87051561	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.2
4	87085926	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	89261998	A->G	-	ENSG00000185477	GPRIN3	protein_coding	Intergenic	.	.	Alu	0.142857
5	10359829	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.153846
5	10359912	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.125
5	10368378	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
5	10368553	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.1
5	10370178	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.2
5	14176553	A->G	+	ENSG00000038382	TRIO	protein_coding	Intergenic	.	.	Alu	0.166667
5	14176566	A->G	+	ENSG00000038382	TRIO	protein_coding	Intergenic	.	.	Alu	0.833333
5	14176571	A->G	+	ENSG00000038382	TRIO	protein_coding	Intergenic	.	.	Alu	0.416667
5	14176628	A->G	+	ENSG00000038382	TRIO	protein_coding	Intergenic	.	.	Alu	0.384615
5	14176717	A->G	+	ENSG00000038382	TRIO	protein_coding	Intergenic	.	.	Alu	0.2
5	17234020	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	17235390	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	17237158	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	17237711	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	17237776	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.214286
5	17237854	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.0882353
5	17237872	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	17237873	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.146341
5	17237891	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	17241283	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.176471
5	17245257	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.333333
5	17245265	A->G	+	ENSG00000176788	BASP1	protein_coding	Intergenic	.	.	Alu	0.444444
5	32155417	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.166667
5	32155419	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.2
5	32156263	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.133333
5	32165461	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.166667
5	32166590	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.125
5	32167239	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.363636
5	32167309	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.181818
5	32167316	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.25
5	32167451	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.142857
5	32167904	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.1875
5	32384899	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	1
5	32398783	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2
5	32398784	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.3
5	34952893	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.5
5	34952895	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.181818
5	34952901	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.2
5	34952970	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.333333
5	34953341	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.125
5	34953502	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.2
5	37050353	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.181818
5	37050370	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.363636
5	38968526	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.2
5	38968541	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.142857
5	38968583	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.2
5	38968616	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.214286
5	38968622	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.461538
5	38968626	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.454545
5	42952468	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
5	42993020	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
5	42993722	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
5	42993731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
5	42995875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
5	42996672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
5	43057925	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.153846
5	43133273	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.3
5	43133282	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.4
5	50413687	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.636364
5	50413834	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.2
5	50414307	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.5
5	50414352	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.818182
5	50732892	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.166667
5	50733161	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.333333
5	54521539	A->G	+	ENSG00000178996	SNX18	protein_coding	Intergenic	.	.	Alu	0.105263
5	54521750	A->G	+	ENSG00000178996	SNX18	protein_coding	Intergenic	.	.	Alu	0.153846
5	54523337	A->G	+	ENSG00000178996	SNX18	protein_coding	Intergenic	.	.	Alu	0.75
5	54526244	A->G	+	ENSG00000178996	SNX18	protein_coding	Intergenic	.	.	Alu	0.142857
5	55953486	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.384615
5	55953487	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.357143
5	55953833	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.1875
5	55953839	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.2
5	55953905	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.105263
5	55953911	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.588235
5	55953951	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.1875
5	55953956	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.235294
5	55958208	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.181818
5	56886283	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.166667
5	56886284	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.25
5	56886925	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.3
5	56886933	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.2
5	58456677	A->G	-	ENSG00000145632	PLK2	protein_coding	Intergenic	.	.	Alu	1
5	61365935	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.421053
5	61365936	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.315789
5	61365986	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.285714
5	61365999	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.285714
5	61366104	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.125
5	61366158	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.2
5	61366173	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.333333
5	61366677	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.2
5	61366850	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.272727
5	61366854	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.363636
5	61367356	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.1
5	65947922	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.3
5	65947927	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.272727
5	65947928	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.3
5	65948973	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.2
5	68235238	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.0425532
5	68235242	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.04
5	68240633	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.508197
5	72890902	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.111111
5	72890966	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.307692
5	72890993	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.307692
5	72891318	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
5	72905817	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	75458745	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	Intergenic	.	.	Alu	0.181818
5	76408116	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.4
5	76408640	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.454545
5	78134626	A->G	-	ENSG00000132842	AP3B1	protein_coding	Intergenic	.	.	Alu	0.125
5	78952501	A->G	-	ENSG00000113273	ARSB	protein_coding	Intergenic	.	.	Alu	0.2
5	79637480	A->G	+	ENSG00000164329	TENT2	protein_coding	Intergenic	.	.	Alu	0.166667
5	81694724	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.125
5	83514507	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.15
5	83514515	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.0952381
5	83514520	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.1
5	83516045	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.238095
5	83516085	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.142857
5	83516234	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.117647
5	83528929	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.483871
5	87382981	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.0666667
5	87397225	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.1
5	87397297	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.153846
5	87398851	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.111111
5	91278718	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
5	91279868	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
5	91301222	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
5	91301300	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
5	91302078	A->G	-	.	.	.	Intergenic	.	.	Alu	0.121212
5	91302088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
5	91303514	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.111111
5	91304161	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.1
5	91305416	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0595238
5	91305433	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.146341
5	91305434	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0365854
5	91305503	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0434783
5	91308406	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0704225
5	91308911	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0210526
5	91309024	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0379747
5	91309082	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0410959
5	91309546	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0641026
5	91309549	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0769231
5	91309686	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0232558
5	91310098	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0353982
5	91310107	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0338983
5	91310152	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0222222
5	91310190	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.107843
5	91310285	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.191489
5	91310290	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0638298
5	91310291	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.173913
5	91310331	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.145833
5	91310335	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0434783
5	91310761	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0350877
5	91310785	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.025641
5	91310841	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0344828
5	91310874	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0277778
5	91310897	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0277778
5	91310919	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.025641
5	94023447	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.272727
5	94029972	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.3
5	94030077	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.4
5	94031576	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.75
5	94032525	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.1875
5	94032576	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
5	94044962	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.153846
5	94049738	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.466667
5	94049739	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.333333
5	94050037	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.176471
5	94050042	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.238095
5	94050094	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.117647
5	95905033	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.217391
5	95922283	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.153846
5	96680139	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.1875
5	96680147	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.117647
5	96680173	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.133333
5	96680232	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.2
5	96684832	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.181818
5	96684844	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.181818
5	96724712	A->G	+	ENSG00000153113	CAST	protein_coding	Intergenic	.	.	Alu	0.272727
5	98862035	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98862045	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.285714
5	98862057	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	98867875	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.206897
5	98867940	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.521739
5	98867941	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.08
5	98868072	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.235294
5	98868205	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.130435
5	98891284	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98891302	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98891314	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	98891619	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98891754	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.172414
5	98891775	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98894933	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	98894999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.107143
5	98895003	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98895550	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98895587	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	98895628	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0465116
5	98895670	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0851064
5	98895717	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0789474
5	98918640	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.176471
5	98918659	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.136364
5	98918660	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	98920634	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0377358
5	98920713	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0434783
5	98923450	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98923506	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.08
5	98923517	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	98923518	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98923532	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.142857
5	98923582	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0540541
5	98923583	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0526316
5	98923590	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.189189
5	98923591	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0810811
5	98923593	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0555556
5	98923615	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.225806
5	98923685	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	98923686	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.230769
5	98923999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0434783
5	98924035	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0392157
5	98924161	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.207547
5	98924199	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.173913
5	98924213	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	98924215	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98924245	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.344828
6	11361578	A->G	-	ENSG00000111859	NEDD9	protein_coding	Intergenic	.	.	Alu	0.7
6	11361592	A->G	-	ENSG00000111859	NEDD9	protein_coding	Intergenic	.	.	Alu	0.4
6	11361600	A->G	-	ENSG00000111859	NEDD9	protein_coding	Intergenic	.	.	Alu	0.230769
6	13477988	A->G	-	ENSG00000145990	GFOD1	protein_coding	Intergenic	.	.	Alu	0.4
6	13638648	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.307692
6	14121547	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0483871
6	14121554	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0294118
6	14130666	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0235294
6	15251086	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0285714
6	15251129	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0821918
6	15251141	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0892857
6	15251151	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.116667
6	15251178	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.162162
6	15251191	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0857143
6	15251218	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.44
6	15251278	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.35
6	15251768	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15251777	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.105263
6	15251794	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.137931
6	15251820	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0606061
6	15251857	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.225806
6	15251858	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.15625
6	15251903	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.212121
6	15251953	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	15254864	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0465116
6	15255234	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.09375
6	15255244	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0294118
6	15255285	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	15255288	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.32
6	15255302	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0444444
6	15255355	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.382353
6	15262677	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15262741	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	15269639	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	15270212	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.5
6	15270237	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.384615
6	15270393	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15270715	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15270862	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	15271576	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15271577	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15272054	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15273554	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.12
6	15273581	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0857143
6	15273597	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15273650	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15273651	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0789474
6	15273998	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15277310	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15284612	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0697674
6	15284613	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0454545
6	15285175	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15285191	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.105263
6	15285240	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15285250	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15285399	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	15286072	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.05
6	15286284	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.214286
6	15286317	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15286369	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	15286381	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.222222
6	15286391	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.375
6	15286393	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.173913
6	15286401	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	15286452	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.235294
6	15286486	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25
6	15286510	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15286673	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.666667
6	15286715	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15286741	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.923077
6	15286747	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.384615
6	15286812	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15286994	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.157895
6	15286995	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.15
6	15289494	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.15
6	15289495	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15289595	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15289670	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	15289725	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.115385
6	15289726	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15289739	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	15289790	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15290662	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0566038
6	15290669	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.04
6	15290680	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0363636
6	15290745	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.16129
6	15290748	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.34375
6	15290760	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0555556
6	15290774	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.171429
6	15290784	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.236842
6	15290802	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.297297
6	15290805	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.5
6	15290819	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.171429
6	15290822	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15290977	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25641
6	15291027	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.5
6	15291052	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.46875
6	15291073	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0625
6	15291082	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.114286
6	15291083	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.222222
6	15291084	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0882353
6	15291086	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15291089	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.212121
6	15291115	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0789474
6	15291145	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0344828
6	15291192	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0625
6	15291214	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.075
6	15292156	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.15
6	15292726	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.172414
6	15294399	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15295373	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.107143
6	15297314	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15298431	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15298504	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15302309	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15302336	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.05
6	15302337	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.05
6	15302345	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.487805
6	15302791	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.155556
6	15302809	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0625
6	15302834	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.115385
6	15302835	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.314815
6	15302958	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.210526
6	15302963	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15302967	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.235294
6	15306600	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	15306603	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0645161
6	15306612	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0606061
6	15307054	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15307056	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15307058	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.533333
6	15307064	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15307121	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.6
6	15307322	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.733333
6	15307340	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.148148
6	15307352	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.178571
6	15307403	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15307408	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	15307423	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.75
6	15307480	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.157895
6	15307481	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0731707
6	15311328	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15311329	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15311434	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15311456	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	15311480	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.130435
6	15311530	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	15312135	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	15312142	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	15312149	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.176471
6	15312159	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.111111
6	15312229	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	15312244	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15312314	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.272727
6	15312315	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15312327	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15319467	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0357143
6	15319540	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0526316
6	15321893	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15321932	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.111111
6	15321967	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15323664	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	15323734	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15323748	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.238095
6	15324028	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15324099	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.136364
6	15324167	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15324576	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1875
6	15324577	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.235294
6	15324606	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15335125	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.176471
6	15335153	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.317073
6	15335155	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.175
6	15335362	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.075
6	15335885	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0483871
6	15335912	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0392157
6	15335987	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0540541
6	15346839	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0487805
6	15346869	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0625
6	15346893	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15346933	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	15355792	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	15376639	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15376649	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15377527	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0526316
6	15377546	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.135135
6	15377565	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0625
6	15380153	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15380257	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.137931
6	15394447	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0606061
6	15417480	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.15
6	15417537	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0540541
6	15417597	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.236842
6	15417616	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15418347	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15418398	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.171429
6	15418401	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0882353
6	15418413	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.263158
6	15418495	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.06
6	15424182	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.08
6	15424188	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	15429343	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15429345	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15450438	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	15455553	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15455555	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15465904	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1
6	16646140	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.166667
6	16735784	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.111111
6	17657456	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.142857
6	17657477	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.153846
6	17658309	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0769231
6	17659540	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.1
6	17659611	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.25
6	17659699	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.181818
6	17661202	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0833333
6	17661214	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0909091
6	17661257	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.166667
6	17668640	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.272727
6	17668649	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.272727
6	18154673	A->G	-	ENSG00000137364	TPMT	protein_coding	Intergenic	.	.	Alu	0.133333
6	18166595	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.272727
6	18166774	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.3
6	18166779	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.272727
6	18166817	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	18167298	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	18167299	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.384615
6	18167535	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.2
6	18167551	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.2
6	18167554	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.545455
6	18167573	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	18167586	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	18167619	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.357143
6	18167621	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.142857
6	18167694	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.2
6	18167702	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.2
6	18167726	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.363636
6	18168028	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.2
6	18180763	A->G	+	ENSG00000165097	KDM1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	18329154	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
6	18329428	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
6	18330769	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
6	18409753	A->G	+	ENSG00000137393	RNF144B	protein_coding	Intergenic	.	.	Alu	0.333333
6	20405569	A->G	+	ENSG00000112242	E2F3	protein_coding	Intergenic	.	.	Alu	0.133333
6	20410758	A->G	+	ENSG00000112242	E2F3	protein_coding	Intergenic	.	.	Alu	0.153846
6	20444030	A->G	+	ENSG00000112242	E2F3	protein_coding	Intergenic	.	.	Alu	0.2
6	24710868	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.142857
6	25964835	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.2
6	25964912	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.230769
6	25965781	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.2
6	25976324	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.3
6	29943642	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intergenic	.	.	Alu	1
6	30491866	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.025641
6	30491936	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0567376
6	30492003	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0204082
6	30591876	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.3
6	30592076	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.230769
6	32474047	A->G	+	.	.	.	Intergenic	.	.	Alu	1
6	32568054	A->G	-	.	.	.	Intergenic	.	.	Alu	1
6	32580420	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	1
6	33307179	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.181818
6	33307188	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.2
6	33307205	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.181818
6	33307274	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.454545
6	33310261	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.153846
6	33310262	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.384615
6	33310263	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.25
6	33310406	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.2
6	35355259	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.133333
6	35355274	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.142857
6	35355778	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.2
6	36973875	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.866667
6	36973900	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.454545
6	36973943	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.461538
6	36974015	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.25
6	36974021	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.636364
6	36974024	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.727273
6	36974994	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.4
6	37033192	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
6	37033195	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
6	37033196	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
6	37449181	A->G	+	ENSG00000137200	CMTR1	protein_coding	Intergenic	.	.	Alu	0.2
6	37823931	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	37829492	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.3
6	37832810	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.266667
6	37832898	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.157895
6	37841549	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.133333
6	37844554	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.25
6	37847499	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.428571
6	37847539	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.111111
6	37866029	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.25
6	37874758	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	37885836	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	37891779	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.130435
6	37891828	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.173913
6	37891829	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.0869565
6	37891846	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.25
6	37891943	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.4
6	37934789	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.2
6	37942083	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.346154
6	37945618	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.0555556
6	37945643	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.05
6	37951475	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.133333
6	37953608	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	37953654	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.2
6	37958375	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	37958393	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	37968808	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.2
6	37978765	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.117647
6	37985216	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	38002647	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.272727
6	38045291	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.210526
6	38045309	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.125
6	38062978	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.3
6	38120594	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.5
6	38120602	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.0833333
6	38121112	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.133333
6	38121297	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.25
6	38121302	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.25
6	38561739	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.454545
6	38561743	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.916667
6	38561751	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.857143
6	41277984	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.3
6	41277987	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.258065
6	41278054	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0869565
6	41278221	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0588235
6	41278410	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.09375
6	41278448	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0877193
6	41278452	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0363636
6	41278505	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.1
6	41278541	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.225806
6	41278549	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0909091
6	41278561	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.235294
6	41278564	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0606061
6	41278565	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.545455
6	42940220	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	42940227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.354839
6	42940232	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
6	42941282	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.217391
6	42941310	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0909091
6	42941364	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.08
6	42941381	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0740741
6	42941415	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0731707
6	42941416	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.125
6	42941424	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0512821
6	42941441	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0571429
6	42941443	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0555556
6	42941506	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0967742
6	42941618	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.333333
6	42941838	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.176471
6	42941863	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.105263
6	42941946	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.105263
6	42941996	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0869565
6	42941999	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.08
6	42942008	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0645161
6	42942211	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
6	42942218	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
6	42942394	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0689655
6	42942440	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.285714
6	42942458	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.111111
6	42942902	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0740741
6	42943352	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0645161
6	42943354	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
6	42943374	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0869565
6	43030703	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.2
6	45465735	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.333333
6	45465748	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.368421
6	45465765	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.153846
6	45465885	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.117647
6	45465893	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.133333
6	45465907	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.25
6	45466202	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.2
6	45466206	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.4
6	45466219	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.818182
6	47534487	A->G	+	ENSG00000198087	CD2AP	protein_coding	Intergenic	.	.	Alu	0.153846
6	47534497	A->G	+	ENSG00000198087	CD2AP	protein_coding	Intergenic	.	.	Alu	0.214286
6	53272336	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.2
6	53285785	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.181818
6	53285788	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.3
6	53285870	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.153846
6	53285873	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.142857
6	53292534	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.142857
6	53292753	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.125
6	53323640	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.222222
6	53323645	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.25
6	53323648	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0952381
6	53323650	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.590909
6	53323680	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.625
6	53323715	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.125
6	53323762	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.166667
6	53324096	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.133333
6	53324105	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.272727
6	53324141	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.166667
6	53324172	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.3
6	53335590	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.4
6	73512479	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
6	73512580	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
6	73513935	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
6	73513944	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
6	73514124	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
6	73514269	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	73514353	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
6	73514442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
6	73514491	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
6	73514627	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
6	73514827	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0535714
6	73514927	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
6	73515529	A->G	-	.	.	.	Intergenic	.	.	Alu	0.030303
6	75238926	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.111111
6	75612582	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.181818
6	75636966	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.166667
6	75636981	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.133333
6	75637011	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.142857
6	75638990	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	75640273	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.5
6	75641716	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.176471
6	75641720	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.125
6	75641746	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.142857
6	75649192	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.5
6	75649194	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.3
6	85625480	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.230769
6	85625658	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.166667
6	85625659	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.25
6	85628122	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.2
6	87167470	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.153846
6	87167479	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.153846
6	87167510	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.125
6	87167547	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.181818
6	87172644	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87237315	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.166667
6	87237359	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.153846
6	87237381	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.125
6	87237422	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.235294
6	87237431	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.266667
6	87238311	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.190476
6	87238322	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.3
6	87238366	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87241097	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.181818
6	87241099	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87241190	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.3
6	87250255	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.166667
6	87554621	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.181818
6	87568473	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.5
6	87673289	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
6	87673299	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	87673719	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
6	87673741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
6	87673758	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
6	87683919	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.117647
6	87688116	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.1875
6	87688243	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.111111
6	87688264	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.105263
6	87688286	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.333333
6	87688325	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.461538
6	87688326	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.307692
6	87688335	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.230769
6	87688355	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.142857
6	87688580	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.6
6	87688583	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.333333
6	87688628	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.2
6	87688634	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.714286
6	87688655	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.380952
6	87688707	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.1
6	87688740	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.142857
6	90583114	A->G	-	ENSG00000135341	MAP3K7	protein_coding	Intergenic	.	.	Alu	0.2
6	99405021	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.2
6	99405776	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.266667
6	99419557	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.3
7	11059521	A->G	+	ENSG00000106443	PHF14	protein_coding	Intergenic	.	.	Alu	0.3
7	20349280	A->G	+	ENSG00000105855	ITGB8	protein_coding	Intergenic	.	.	Alu	0.4
7	23518158	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.272727
7	23518178	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	1
7	27806163	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.117647
7	27806189	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.142857
7	27806190	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.153846
7	27814876	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.153846
7	29218596	A->G	+	ENSG00000285162	AC004593.3	protein_coding	Intergenic	.	.	Alu	0.357143
7	29229776	A->G	+	ENSG00000285162	AC004593.3	protein_coding	Intergenic	.	.	Alu	0.181818
7	29229782	A->G	+	ENSG00000285162	AC004593.3	protein_coding	Intergenic	.	.	Alu	0.272727
7	32505438	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.176471
7	32505451	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.176471
7	32505498	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.352941
7	32562707	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.153846
7	32562742	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.133333
7	32563266	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.181818
7	32876726	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.1875
7	35813585	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.25
7	38245924	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.181818
7	38256682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0353982
7	38256814	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0425532
7	39628659	A->G	+	ENSG00000006451	RALA	protein_coding	Intergenic	.	.	Alu	0.117647
7	39628685	A->G	+	ENSG00000006451	RALA	protein_coding	Intergenic	.	.	Alu	0.117647
7	39630299	A->G	+	ENSG00000006451	RALA	protein_coding	Intergenic	.	.	Alu	0.111111
7	39630304	A->G	+	ENSG00000006451	RALA	protein_coding	Intergenic	.	.	Alu	0.125
7	39971466	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.2
7	40004917	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.230769
7	40004963	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.133333
7	40004979	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.125
7	40005390	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.166667
7	40005558	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.2
7	43597482	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.35
7	43597507	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.157895
7	43597701	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.357143
7	43597757	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.235294
7	44625152	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.6875
7	44625225	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.0540541
7	44625912	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.333333
7	44832779	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.05
7	44833335	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.105263
7	44837175	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44837642	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	44837651	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44838459	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	44838468	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.133333
7	44838606	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44838647	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.454545
7	44840199	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.153846
7	44840360	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	44840688	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44840731	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	45111114	A->G	-	ENSG00000136270	TBRG4	protein_coding	Intergenic	.	.	Alu	0.25
7	48093904	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.230769
7	48093983	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.357143
7	48093984	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.357143
7	48094013	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.111111
7	48094314	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0909091
7	48094413	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.1
7	48104124	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.333333
7	55392468	A->G	+	ENSG00000132434	LANCL2	protein_coding	Intergenic	.	.	Alu	0.142857
7	55392496	A->G	+	ENSG00000132434	LANCL2	protein_coding	Intergenic	.	.	Alu	0.153846
7	55455223	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.142857
7	55455407	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.136364
7	55455641	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.1875
7	55461479	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.153846
7	55461504	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.166667
7	55466719	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.2
7	55508432	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.111111
7	56052955	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.2
7	56052983	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.166667
7	65981516	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.142857
7	66681007	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.307692
7	66681489	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66683853	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66683925	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66684350	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3
7	66684897	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66685421	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0294118
7	66715853	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66739586	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.4
7	66741729	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3125
7	66741731	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.307692
7	66741891	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66742646	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66742869	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0689655
7	66745137	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66745511	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66745551	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66746563	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66746710	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66746959	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66749542	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66761948	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66782550	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66785556	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.107143
7	66785619	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66785620	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.266667
7	66785625	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.16129
7	66785674	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0952381
7	66785695	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66785711	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0909091
7	66785722	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0952381
7	66785723	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0952381
7	66785724	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.157895
7	66785753	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.5
7	66785780	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1
7	66785815	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.387097
7	66785839	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0769231
7	66786533	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0588235
7	66786543	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0909091
7	66786578	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66786664	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0952381
7	66786665	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1
7	66786666	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.15
7	66786898	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.157895
7	66787070	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66787106	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.230769
7	66787156	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.173913
7	66787166	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.227273
7	66787217	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66787234	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1
7	66787244	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0833333
7	66787248	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.178571
7	66787296	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1
7	66787528	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.217391
7	66787573	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66787592	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66787619	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.121951
7	72834995	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	72834996	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	72834998	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
7	72835003	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	72835969	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	72836107	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	72836113	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	72995722	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	73007014	A->G	+	ENSG00000229018	PMS2P7	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	73461915	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.166667
7	73538579	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.285714
7	73538596	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.375
7	73538597	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.125
7	73538698	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.4
7	73538701	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.2
7	73538730	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.2
7	73539389	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.2
7	73539524	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.125
7	73577782	A->G	-	ENSG00000106638	TBL2	protein_coding	Intergenic	.	.	Alu	0.363636
7	74178015	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.4
7	74187210	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.230769
7	74880940	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	75618228	A->G	+	ENSG00000127946	HIP1	protein_coding	Intergenic	.	.	Alu	0.105263
7	75618361	A->G	+	ENSG00000127946	HIP1	protein_coding	Intergenic	.	.	Alu	0.125
7	75883328	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.769231
7	76353991	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.166667
7	76353992	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.166667
7	77541312	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.125
7	77554099	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.117647
7	77556164	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.181818
7	77556325	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.111111
7	77556337	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.1
7	77556588	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.105263
7	77556594	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.210526
7	77556595	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.157895
7	77556736	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.266667
7	77556787	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.133333
7	77557079	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.416667
7	77557084	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.153846
7	77557232	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.142857
7	77557241	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.136364
7	77557244	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.0952381
7	77557247	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.105263
7	77566467	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.3
7	77566681	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.166667
7	77572195	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.3
7	77582263	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.384615
7	77594713	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.181818
7	90609080	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.3
7	90609082	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
7	90609091	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
7	90609287	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.181818
7	90626662	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.214286
7	90626706	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.1
7	90626884	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.142857
7	90627265	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.357143
7	90627349	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.333333
7	90628080	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
7	90628714	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.153846
7	90628728	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.142857
7	90628738	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.133333
7	99037833	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.153846
7	99038949	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.153846
7	99039009	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.363636
7	99039026	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.384615
7	99039081	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.454545
7	99039635	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.615385
7	99039643	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.333333
7	99100443	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.181818
7	99122520	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.181818
7	99125171	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.3
7	99129535	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.153846
7	99378146	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.105263
7	99378154	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.117647
7	99378159	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.764706
7	99378160	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.529412
7	99378562	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.153846
7	99378572	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.153846
7	99378595	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.166667
7	99491961	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.142857
7	99492013	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.181818
7	99494806	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.272727
7	99496253	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.142857
7	99496288	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.181818
7	99496634	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.176471
7	99497453	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.272727
7	99497672	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.125
7	99497681	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.615385
7	99497701	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.214286
7	99497751	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.105263
7	99497810	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.8125
7	99497848	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.333333
7	99501164	A->G	+	ENSG00000198556	ZNF789	protein_coding	Intergenic	.	.	Alu	0.272727
7	99566790	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.166667
7	99567284	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.2
7	99568884	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.3
8	11857182	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.181818
8	16180925	A->G	-	ENSG00000038945	MSR1	protein_coding	Intergenic	.	.	Alu	0.2
8	16186734	A->G	-	ENSG00000038945	MSR1	protein_coding	Intergenic	.	.	Alu	0.25
8	16187146	A->G	-	ENSG00000038945	MSR1	protein_coding	Intergenic	.	.	Alu	0.0967742
8	16187277	A->G	-	ENSG00000038945	MSR1	protein_coding	Intergenic	.	.	Alu	0.277778
8	16187287	A->G	-	ENSG00000038945	MSR1	protein_coding	Intergenic	.	.	Alu	0.111111
8	16187332	A->G	-	ENSG00000038945	MSR1	protein_coding	Intergenic	.	.	Alu	0.142857
8	17975377	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.6
8	22631380	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.4
8	22631862	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.210526
8	23187485	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
8	23188321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
8	23188325	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
8	23188354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.192308
8	23188385	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	23188392	A->G	-	.	.	.	Intergenic	.	.	Alu	0.28
8	23188500	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
8	23188508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.692308
8	23188638	A->G	-	.	.	.	Intergenic	.	.	Alu	0.909091
8	23188641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
8	23188804	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
8	23188805	A->G	-	.	.	.	Intergenic	.	.	Alu	0.444444
8	23188810	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
8	23188960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.59375
8	23188980	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
8	23189005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
8	23189019	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
8	23189046	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5625
8	23189062	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
8	23189109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
8	23189560	A->G	-	ENSG00000253930	TNFRSF10A-AS1	antisense	Intergenic	.	.	Alu	0.2
8	23189570	A->G	-	ENSG00000253930	TNFRSF10A-AS1	antisense	Intergenic	.	.	Alu	0.3
8	25186599	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.166667
8	25186641	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	25186653	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.2
8	25186659	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.153846
8	25187115	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.2
8	25192605	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.153846
8	25192606	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.214286
8	25192786	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.181818
8	25197890	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.5
8	25198023	A->G	-	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	26297137	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.133333
8	26299200	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.117647
8	26306769	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.111111
8	26309123	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.125
8	26315089	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.454545
8	26386479	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.166667
8	27335379	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.133333
8	27341800	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.2
8	27373559	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.117647
8	27373561	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.176471
8	27382051	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.133333
8	27385709	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.181818
8	30081530	A->G	-	ENSG00000133872	SARAF	protein_coding	Intergenic	.	.	Alu	1
8	37764447	A->G	+	ENSG00000147471	PLPBP	protein_coding	Intergenic	.	.	Alu	0.333333
8	37883353	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.125
8	37889851	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.133333
8	37889852	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.5
8	37889869	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.307692
8	37890723	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.636364
8	37890729	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.363636
8	38217109	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
8	38217572	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
8	38246683	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.230769
8	38246695	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.5
8	38452420	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.533333
8	38452433	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.571429
8	38831608	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	38907681	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38911337	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38911829	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.181818
8	38911878	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.230769
8	38915181	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.25
8	39020030	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.125
8	39020031	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.117647
8	39020036	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.578947
8	39020074	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.266667
8	39020077	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.285714
8	39020098	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.214286
8	39020134	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.230769
8	39020135	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.153846
8	39020138	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.666667
8	39020234	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.103448
8	39021302	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.190476
8	39021464	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.153846
8	39021484	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.545455
8	39021546	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.166667
8	39021547	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.25
8	39021552	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.666667
8	39021558	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.153846
8	39021564	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.166667
8	41545460	A->G	+	ENSG00000253133	AC009630.1	antisense	Intergenic	.	.	Alu	0.0512821
8	41545497	A->G	+	ENSG00000253133	AC009630.1	antisense	Intergenic	.	.	Alu	0.105263
8	41545505	A->G	+	ENSG00000253133	AC009630.1	antisense	Intergenic	.	.	Alu	0.0681818
8	41545506	A->G	+	ENSG00000253133	AC009630.1	antisense	Intergenic	.	.	Alu	0.162791
8	41545563	A->G	+	ENSG00000253133	AC009630.1	antisense	Intergenic	.	.	Alu	0.0555556
8	41546091	A->G	+	ENSG00000253133	AC009630.1	antisense	Intergenic	.	.	Alu	0.133333
8	41546152	A->G	+	ENSG00000253133	AC009630.1	antisense	Intergenic	.	.	Alu	0.153846
8	41546167	A->G	+	ENSG00000253133	AC009630.1	antisense	Intergenic	.	.	Alu	0.142857
8	41583106	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.0909091
8	41583147	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.133333
8	41584080	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.08
8	41584131	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.0666667
8	41584132	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.0645161
8	41602072	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.0952381
8	41602217	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.0526316
8	41603272	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.153846
8	41603509	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.166667
8	41966293	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.25
8	41966296	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.230769
8	41966403	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.571429
8	41966405	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.214286
8	43144063	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.105263
8	43144095	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.176471
8	43144129	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.533333
8	48009366	A->G	+	ENSG00000169139	UBE2V2	protein_coding	Intergenic	.	.	Alu	0.125
8	51880449	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.25
8	51883360	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.230769
8	52696183	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.230769
8	52696214	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	52696218	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.105263
8	52696815	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.294118
8	52696967	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.214286
8	52700303	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
8	52700306	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52700307	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52700459	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.285714
8	52700527	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52702499	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.6
8	52706528	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.142857
8	52706543	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.9
8	52708991	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.571429
8	52709654	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	53842182	A->G	-	ENSG00000047249	ATP6V1H	protein_coding	Intergenic	.	.	Alu	0.818182
8	55889092	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0967742
8	55889111	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.107143
8	55889329	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55889431	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15
8	55890759	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.636364
8	55890918	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.266667
8	55890943	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.357143
8	55890963	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55891261	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0555556
8	55891284	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0645161
8	55891297	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0714286
8	55892270	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0740741
8	55892299	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0714286
8	55894300	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.142857
8	55894487	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.1
8	55894944	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0909091
8	55895526	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0571429
8	55895528	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0540541
8	55897650	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.206897
8	55897721	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.8
8	55897730	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.375
8	55897771	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.210526
8	55897782	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55897792	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55897802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.5
8	55897806	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.5
8	55897854	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.217391
8	55898314	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55898350	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.111111
8	55898352	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55898369	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55898389	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55898414	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55898430	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55898498	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3
8	55898519	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55898888	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0882353
8	55898954	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0540541
8	55898990	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0540541
8	55899010	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0740741
8	55899875	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0689655
8	55900473	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0833333
8	55902085	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55902191	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55902421	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0833333
8	55902431	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55902966	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55902978	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.230769
8	55903006	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55903745	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55903752	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55903832	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55903843	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55903869	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55906370	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55906496	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0588235
8	55907707	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55908374	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.12
8	55908386	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55908445	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55908479	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0740741
8	55916915	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55916922	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55917225	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55917312	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55922121	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.588235
8	55922165	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55922191	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.285714
8	55922233	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55922304	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.384615
8	55922342	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55922364	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55927742	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55927775	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55928165	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55928172	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.222222
8	55928215	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55932521	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.129032
8	55932522	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0967742
8	55932563	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.121212
8	55942626	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55944542	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55964266	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0833333
8	55965998	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55966442	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.277778
8	55966471	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55966507	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55966573	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.571429
8	55966577	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55966611	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.147059
8	55969071	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55969085	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55969255	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55969261	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55986826	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55986908	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15
8	55986914	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55987193	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55987256	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55987263	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55987266	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55987546	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15
8	55987651	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.352941
8	55987659	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55999851	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0322581
8	56003268	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.5
8	56003323	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	56003335	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	56964436	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.230769
8	56965069	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.235294
8	56965075	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.111111
8	56965262	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	56965268	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	56965305	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.111111
8	56965317	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.142857
8	58605780	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.153846
8	58655021	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.166667
8	58655032	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.181818
8	58655042	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.333333
8	60525362	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.230769
8	60532663	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
8	60532730	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.5
8	60532744	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	60532745	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.230769
8	60532749	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	60533761	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.176471
8	60533769	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.307692
8	60533770	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	60533850	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	60557247	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	60557258	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.5
8	60557306	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.105263
8	60557665	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.3
8	60585382	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.6
8	60594961	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.428571
8	60753868	A->G	+	ENSG00000171316	CHD7	protein_coding	Intergenic	.	.	Alu	0.117647
8	60753899	A->G	+	ENSG00000171316	CHD7	protein_coding	Intergenic	.	.	Alu	0.111111
8	67305472	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.3
8	67326104	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.181818
8	67326146	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.2
8	67329126	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.727273
8	70390645	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.166667
8	70390685	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.2
8	70578327	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.3
8	73815133	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.272727
8	73815263	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.2
8	73873580	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.2
8	73873625	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.5
8	79957517	A->G	-	ENSG00000147586	MRPS28	protein_coding	Intergenic	.	.	Alu	0.181818
8	89781466	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.238095
8	89781467	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0952381
8	89782004	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0588235
8	89782009	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.125
8	89782049	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.0625
8	89782060	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.416667
8	89782075	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.176471
8	94258542	A->G	-	ENSG00000164949	GEM	protein_coding	Intergenic	.	.	Alu	0.285714
8	96500452	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.2
8	96500476	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.125
8	96500541	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.2
8	96500604	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.192308
8	96500617	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0869565
8	96501434	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0833333
8	96501505	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0909091
8	96501560	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0689655
8	96506508	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0909091
8	96506551	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.117647
8	96506589	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0645161
8	96506594	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0740741
8	96506610	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.4
8	96506616	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0714286
8	96506757	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.642857
8	96506888	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0769231
8	96506898	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0740741
8	96530559	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.08
8	96535148	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.1
8	96538021	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0214286
8	96541396	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.117647
8	96553837	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0588235
8	96554004	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0714286
8	96554026	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.0454545
8	96556082	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.125
8	96581374	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.285714
8	96583135	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.166667
8	96583214	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.333333
8	96583232	A->G	+	ENSG00000169439	SDC2	protein_coding	Intergenic	.	.	Alu	0.166667
8	97650549	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.181818
8	97729116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
8	97729701	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
9	15498316	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.307692
9	33027690	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	33035611	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.133333
9	33035650	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.5
9	33119055	A->G	-	ENSG00000086062	B4GALT1	protein_coding	Intergenic	.	.	Alu	0.153846
9	33119567	A->G	-	ENSG00000086062	B4GALT1	protein_coding	Intergenic	.	.	Alu	0.3
9	33119568	A->G	-	ENSG00000086062	B4GALT1	protein_coding	Intergenic	.	.	Alu	0.2
9	33119572	A->G	-	ENSG00000086062	B4GALT1	protein_coding	Intergenic	.	.	Alu	0.3
9	33826443	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.166667
9	33826444	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.166667
9	33829009	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.2
9	33835822	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.6
9	34183827	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.538462
9	34193087	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.222222
9	34194521	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	34201079	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	34201124	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.230769
9	34201177	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	34201402	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intergenic	.	.	Alu	0.235294
9	34203187	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34203189	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34204180	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	34205206	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	34218714	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	34219188	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.7
9	34226588	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	34226602	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.25
9	35047922	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
9	35047944	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
9	35047964	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
9	35696387	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	36346316	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.181818
9	36346410	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.3
9	37160394	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.4
9	40992831	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.294118
9	42351448	A->G	+	ENSG00000275649	AL445584.2	lincRNA	Intergenic	.	.	Alu	0.181818
9	42351483	A->G	+	ENSG00000275649	AL445584.2	lincRNA	Intergenic	.	.	Alu	0.142857
9	42351524	A->G	+	ENSG00000275649	AL445584.2	lincRNA	Intergenic	.	.	Alu	0.1875
9	42351540	A->G	+	ENSG00000275649	AL445584.2	lincRNA	Intergenic	.	.	Alu	0.117647
9	70304101	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.1
9	70304108	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.222222
9	70304114	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.105263
9	70304214	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.166667
9	70304431	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.272727
9	70304467	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.142857
9	70304491	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.1
9	70304535	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.2
9	70304607	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.2
9	70304669	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.222222
9	77985188	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.153846
9	77985698	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77992833	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.133333
9	77992845	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.230769
9	77994071	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77994161	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.153846
9	77994290	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.2
9	77995681	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.176471
9	77995690	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.125
9	77995723	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.35
9	78014449	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.25
9	79676342	A->G	+	ENSG00000106829	TLE4	protein_coding	Intergenic	.	.	Alu	0.5
9	83704659	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.2
9	86319940	A->G	-	ENSG00000083223	TUT7	protein_coding	Intergenic	.	.	Alu	0.230769
9	86319971	A->G	-	ENSG00000083223	TUT7	protein_coding	Intergenic	.	.	Alu	0.1875
9	86319973	A->G	-	ENSG00000083223	TUT7	protein_coding	Intergenic	.	.	Alu	0.117647
9	90863930	A->G	+	ENSG00000165025	SYK	protein_coding	Intergenic	.	.	Alu	0.533333
9	90876176	A->G	+	ENSG00000165025	SYK	protein_coding	Intergenic	.	.	Alu	0.3
9	90877191	A->G	+	ENSG00000165025	SYK	protein_coding	Intergenic	.	.	Alu	0.2
9	91350635	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.454545
9	91353650	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.3
9	91353653	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.181818
9	91355445	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.142857
9	91355457	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.230769
9	94452518	A->G	+	ENSG00000148110	MFSD14B	protein_coding	Intergenic	.	.	Alu	0.3
9	94452526	A->G	+	ENSG00000148110	MFSD14B	protein_coding	Intergenic	.	.	Alu	0.25
9	97663719	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	98068765	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.285714
9	99841186	A->G	+	ENSG00000119508	NR4A3	protein_coding	Intergenic	.	.	Alu	0.117647
10	11239859	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.142857
10	11239889	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.1875
10	11241239	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.388889
10	11241317	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.357143
10	11241389	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.25
10	12365191	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.181818
10	12365192	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.363636
10	12365203	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.181818
10	12385920	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.538462
10	12385932	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.454545
10	12385980	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.153846
10	12441751	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.2
10	12443734	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.2
10	13343751	A->G	-	ENSG00000086475	SEPHS1	protein_coding	Intergenic	.	.	Alu	0.285714
10	13343752	A->G	-	ENSG00000086475	SEPHS1	protein_coding	Intergenic	.	.	Alu	0.214286
10	14576322	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.157895
10	14576432	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0952381
10	14581808	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0909091
10	14582552	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.181818
10	14582554	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.181818
10	14582658	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.263158
10	14582820	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.075
10	14582821	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0810811
10	14593618	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0833333
10	14595523	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.25
10	14595626	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.142857
10	17212238	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
10	17319162	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.5
10	17686339	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0909091
10	17686420	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0769231
10	17686446	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.777778
10	17686454	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.214286
10	17686476	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.275862
10	17686477	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.166667
10	17686516	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.631579
10	17686551	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.25
10	17686557	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.111111
10	17686574	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.5
10	17686577	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.181818
10	17686594	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.333333
10	17686624	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.176471
10	17686638	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.133333
10	17686639	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.285714
10	17686651	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.823529
10	17687323	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.16
10	17687377	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0833333
10	17687430	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0350877
10	17687454	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.030303
10	19846922	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.15
10	21875248	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.230769
10	21875320	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	21876330	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21876387	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.4
10	21877149	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.4
10	21969041	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.6
10	21969100	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21969112	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	21969137	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	23446818	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
10	26760627	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.151515
10	26760645	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.115385
10	26760707	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	26760724	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.652174
10	26760727	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.172414
10	26760766	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.129032
10	26760807	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.16
10	26760827	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0588235
10	26760867	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.3125
10	26760953	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.210526
10	26761035	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.121212
10	26761051	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.133333
10	26761067	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.6
10	26761081	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.125
10	26761083	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.409091
10	26761107	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0666667
10	26761121	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0882353
10	26761122	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0588235
10	26761124	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.16129
10	26761141	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.484848
10	26761190	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	26761195	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0869565
10	26761210	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26761217	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.32
10	26772855	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.153846
10	26772977	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.1875
10	26785694	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	27115131	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.153846
10	27126192	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	27126198	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	27126294	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	27143158	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	27524192	A->G	+	ENSG00000099246	RAB18	protein_coding	Intergenic	.	.	Alu	0.2
10	28525115	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.192308
10	28525125	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.428571
10	28525130	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.380952
10	28525138	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0909091
10	28525143	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.142857
10	28525236	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0714286
10	28525238	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.192308
10	28525259	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.148148
10	28525260	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.310345
10	28525277	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.321429
10	28525278	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.214286
10	28525301	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0666667
10	28525314	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.230769
10	28525624	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0571429
10	28525756	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.04
10	28539658	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0416667
10	28539677	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0392157
10	28544841	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.142857
10	28563679	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.235294
10	28563680	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.294118
10	28564144	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.473684
10	28564184	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.454545
10	28564207	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.458333
10	28564256	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0689655
10	28579218	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.214286
10	28579308	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.190476
10	28609753	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.3
10	28613215	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.176471
10	30441342	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.1
10	30446102	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.129032
10	30446104	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0666667
10	30446154	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.166667
10	30446293	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.157895
10	30446317	A->G	-	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.1
10	30447019	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.1
10	30452700	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.214286
10	30456987	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0740741
10	31337784	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.3
10	31337814	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.153846
10	31384185	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.181818
10	35197592	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.153846
10	35198403	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.130435
10	35198420	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.115385
10	35203113	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.121212
10	35203246	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0625
10	35203309	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.222222
10	35203545	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.166667
10	35353029	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.142857
10	35354407	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.111111
10	35354420	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.0909091
10	43146627	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.2
10	43146650	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.111111
10	43149334	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.166667
10	43149882	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.294118
10	43149906	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.142857
10	43149907	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.142857
10	43149979	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.105263
10	45728136	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.181818
10	45728282	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.133333
10	45728303	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.2
10	45728306	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.222222
10	50624468	A->G	-	ENSG00000198964	SGMS1	protein_coding	Intergenic	.	.	Alu	0.636364
10	58253472	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.181818
10	58253485	A->G	-	ENSG00000151151	IPMK	protein_coding	Intergenic	.	.	Alu	0.181818
10	58344982	A->G	+	ENSG00000072401	UBE2D1	protein_coding	Intergenic	.	.	Alu	0.235294
10	58345414	A->G	+	ENSG00000072401	UBE2D1	protein_coding	Intergenic	.	.	Alu	0.363636
10	63204063	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0571429
10	63223348	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	63231678	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	63231734	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.08
10	63231943	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63232001	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0909091
10	63236869	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63249234	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	63251015	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0833333
10	63255015	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.105263
10	63255028	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.1
10	63259994	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.1
10	63260820	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.222222
10	63260882	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.117647
10	63261335	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.1875
10	63261437	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.111111
10	63261459	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.117647
10	63261468	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.238095
10	63261469	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.1
10	63261498	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0810811
10	63261529	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.111111
10	67886411	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.454545
10	67890173	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.230769
10	67890182	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.142857
10	67890626	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.272727
10	67892381	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.142857
10	67892446	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67892741	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67894046	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67903523	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.3
10	67903594	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.5
10	68751131	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.2
10	68751585	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.181818
10	68751607	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.166667
10	68959373	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.3
10	69046463	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
10	69046500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
10	69059734	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	69060550	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
10	69061143	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
10	69061144	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
10	69061158	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0526316
10	69061320	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
10	69093756	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0238095
10	69094644	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.05
10	69094645	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0327869
10	69094692	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0632911
10	69095131	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0224719
10	69095161	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0315789
10	69097784	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0526316
10	69099330	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.1
10	69099375	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0892857
10	69099418	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0289855
10	69099426	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0508475
10	69099514	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.047619
10	69099533	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.031746
10	69099534	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0307692
10	69099540	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0447761
10	69099969	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0487805
10	69100056	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0465116
10	69100098	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.106383
10	69100099	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0638298
10	69100339	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0408163
10	69103119	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.1
10	69103123	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0689655
10	69103213	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0645161
10	69103387	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.111111
10	70167540	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.166667
10	70168509	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.0769231
10	71839607	A->G	-	ENSG00000197746	PSAP	protein_coding	Intergenic	.	.	Alu	0.166667
10	71839685	A->G	-	ENSG00000197746	PSAP	protein_coding	Intergenic	.	.	Alu	0.153846
10	71849501	A->G	-	ENSG00000197746	PSAP	protein_coding	Intergenic	.	.	Alu	0.0555556
10	71861214	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
10	71861490	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
10	72296897	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	72296911	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
10	72296914	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0363636
10	72297120	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
10	72297194	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0263158
10	72339458	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.4
10	72339806	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.2
10	73364423	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	73777934	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.307692
10	73778140	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.230769
10	74235443	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
10	75017601	A->G	+	ENSG00000234149	AC018511.2	antisense	Intergenic	.	.	Alu	0.2
10	75017602	A->G	+	ENSG00000234149	AC018511.2	antisense	Intergenic	.	.	Alu	0.2
10	75591173	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
10	75822847	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.3
10	75822851	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.8
10	79093570	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.166667
10	79110819	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.214286
10	79110828	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.25
10	79110933	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.1875
10	79110936	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.333333
10	79302942	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.214286
10	79303003	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.5
10	79303347	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.153846
10	80191347	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.3
10	80191374	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.583333
10	80199543	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.176471
10	80199571	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.277778
10	80199585	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.176471
10	80199623	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.235294
10	80200796	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.214286
10	84330689	A->G	+	ENSG00000107771	CCSER2	protein_coding	Intergenic	.	.	Alu	0.125
10	86478865	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.3
10	87075254	A->G	-	ENSG00000148672	GLUD1	protein_coding	Intergenic	.	.	Alu	0.133333
10	87075260	A->G	-	ENSG00000148672	GLUD1	protein_coding	Intergenic	.	.	Alu	0.133333
10	87096516	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.454545
10	87096519	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.461538
10	87871595	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0882353
10	87871599	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.133333
10	87871660	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.15
10	87871666	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.15
10	87871763	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.047619
10	87871764	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0465116
10	87871771	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0434783
10	87873062	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0952381
10	87873095	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0689655
10	87873118	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.103448
10	87873197	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0769231
10	87890844	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.125
10	87890845	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.117647
10	87890846	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.117647
10	87890890	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.157895
10	87890959	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.157895
10	87908590	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.142857
10	87909420	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.2
10	87912121	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0952381
10	89721410	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.363636
10	89721580	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.454545
10	90878707	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.272727
10	91942163	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.230769
10	91948529	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.125
10	91948564	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.105263
10	91948587	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.117647
10	91958068	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.181818
10	91958104	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.153846
10	91958110	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.230769
10	95681258	A->G	-	ENSG00000119977	TCTN3	protein_coding	Intergenic	.	.	Alu	0.166667
10	95682100	A->G	-	ENSG00000119977	TCTN3	protein_coding	Intergenic	.	.	Alu	0.2
10	96563130	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.1
10	96563214	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.133333
10	96564230	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.2
10	96569866	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.3
10	96569920	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.153846
10	96569924	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.230769
10	96569932	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.2
10	96845954	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.3
10	96845970	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.2
10	96847033	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.2
10	96847066	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.416667
10	96847067	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.363636
10	96848511	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.363636
10	96866629	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.307692
10	96866637	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.142857
10	96867638	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.142857
10	96867639	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.25
10	96913843	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.166667
10	96914245	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.2
10	96933620	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.166667
10	96935249	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.25
10	96935278	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.181818
10	96935290	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.3
10	97374204	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.181818
10	97374212	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.761905
10	97374306	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.461538
10	97374338	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.5
10	97374339	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.428571
10	97374340	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.142857
10	97376076	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.3
10	97377413	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.363636
10	97377417	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.3
10	97396903	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.3
10	97397742	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	98240263	A->G	+	ENSG00000166024	R3HCC1L	protein_coding	Intergenic	.	.	Alu	0.5
11	11859826	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.545455
11	11859908	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
11	11892582	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.272727
11	11893506	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.153846
11	11893530	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.411765
11	11893537	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.1
11	11893562	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.117647
11	11893570	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.142857
11	11893738	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.153846
11	11907876	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.111111
11	11908359	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.214286
11	11908361	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.142857
11	11908391	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.176471
11	13322920	A->G	+	ENSG00000133794	ARNTL	protein_coding	Intergenic	.	.	Alu	0.2
11	13682742	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
11	13683129	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.166667
11	13683137	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.571429
11	13683138	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.285714
11	13683272	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	13683299	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
11	13683375	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.157895
11	13683663	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.111111
11	13703213	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.333333
11	13703219	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.107143
11	13703247	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0869565
11	13703258	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.291667
11	13703263	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.153846
11	13703284	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0666667
11	13703296	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0769231
11	13703323	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.136364
11	14516428	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.181818
11	14670906	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.307692
11	14670909	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	14670959	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	14671773	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.3
11	16756369	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.176471
11	16756370	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.25
11	16756529	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.115385
11	16756670	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0769231
11	17076645	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.136364
11	17076650	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.0909091
11	18506089	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.25
11	18507986	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.166667
11	18508414	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.363636
11	18525104	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.142857
11	18525127	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.133333
11	18525128	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.133333
11	18525302	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.25
11	18525303	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.166667
11	18586649	A->G	-	ENSG00000151116	UEVLD	protein_coding	Intergenic	.	.	Alu	0.4
11	33074672	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.166667
11	33074674	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.25
11	33075484	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.1875
11	33075486	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.142857
11	33266652	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	33866541	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.416667
11	33866829	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.2
11	34076792	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.25
11	34076808	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.133333
11	34076810	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.368421
11	34076874	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.6
11	34076876	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.181818
11	34076909	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0769231
11	34079279	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.222222
11	34079280	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.222222
11	34079332	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.352941
11	34079355	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.125
11	35187017	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0377358
11	35187018	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0545455
11	35187137	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.09375
11	35187940	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0483871
11	35187943	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0254237
11	35188682	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.037037
11	35188683	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0350877
11	35188718	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0294118
11	35212877	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.230769
11	35212941	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.333333
11	35212950	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.111111
11	35213004	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.1
11	35213007	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.125
11	35213010	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.25
11	35213021	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.1875
11	35213489	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.25
11	35213492	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.166667
11	35213553	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.230769
11	35213562	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.105263
11	35213577	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.0769231
11	35213604	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.0571429
11	35216806	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.243243
11	35225742	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0869565
11	35226803	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.176471
11	36486128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
11	36486136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
11	36486137	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
11	36486177	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
11	36486210	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
11	36486227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.217391
11	36486241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
11	36486242	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
11	36486311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
11	36486312	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
11	36486314	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
11	36486826	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
11	36486832	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0540541
11	36486844	A->G	-	.	.	.	Intergenic	.	.	Alu	0.108108
11	36486854	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
11	36486872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	36486904	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
11	36486991	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
11	36487008	A->G	-	.	.	.	Intergenic	.	.	Alu	0.233333
11	36487009	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	43682871	A->G	+	ENSG00000283341	AC068205.2	processed_transcript	Intergenic	.	.	Alu	0.357143
11	44588999	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.136364
11	44589048	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.25
11	44589136	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.4
11	44589205	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.133333
11	44591889	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.133333
11	44591937	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.0952381
11	44612844	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.1875
11	44613726	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.2
11	44613742	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.25
11	44613758	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.266667
11	44614112	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.105263
11	44614113	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.105263
11	45912857	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.272727
11	47168659	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.230769
11	47168697	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.181818
11	47168750	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.176471
11	47168795	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.45
11	47168798	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.157895
11	47168818	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.153846
11	47169124	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47169709	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.133333
11	47169766	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47169774	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.230769
11	47170122	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.153846
11	47170159	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.181818
11	47170238	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.230769
11	47170262	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.230769
11	47170267	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.153846
11	47287466	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.181818
11	47319401	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.25
11	47362398	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.916667
11	47362404	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47366709	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47368321	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47480265	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480269	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47482102	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47522414	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47522468	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.117647
11	47525567	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.363636
11	47536330	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47739680	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.142857
11	47740293	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.333333
11	47740303	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.153846
11	47740332	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47740636	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.181818
11	47740921	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.25
11	47741199	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.25
11	47741200	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.153846
11	47741224	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.428571
11	47741310	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.3
11	47741369	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.272727
11	47741733	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.4
11	47741734	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47743443	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.133333
11	47763281	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.545455
11	47985842	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.416667
11	47985901	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.133333
11	47986548	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.388889
11	47986560	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.1
11	47986617	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.25
11	47986621	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.1875
11	47986658	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.142857
11	47986960	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.416667
11	47986996	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.454545
11	47987001	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.166667
11	47987033	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.583333
11	47987034	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.416667
11	47987128	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.5
11	47987144	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.2
11	47987155	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.25
11	47987180	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.153846
11	47993393	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.25
11	47993397	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.363636
11	47993432	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.166667
11	47993458	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.153846
11	48011762	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.181818
11	48016947	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.153846
11	48016994	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.117647
11	48069283	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.0740741
11	48069514	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.15
11	48069579	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.12
11	48069589	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.181818
11	48069658	A->G	+	ENSG00000149177	PTPRJ	protein_coding	Intergenic	.	.	Alu	0.269231
11	58568491	A->G	-	ENSG00000110031	LPXN	protein_coding	Intergenic	.	.	Alu	0.117647
11	58569421	A->G	-	ENSG00000110031	LPXN	protein_coding	Intergenic	.	.	Alu	0.0714286
11	60388910	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.15
11	60388912	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.15
11	60954851	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
11	60954864	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
11	60954874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
11	61364815	A->G	+	ENSG00000149483	TMEM138	protein_coding	Intergenic	.	.	Alu	0.2
11	61412464	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.2
11	61412987	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.166667
11	61412989	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.263158
11	61412990	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.105263
11	61413047	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.363636
11	61413184	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.923077
11	61413200	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.214286
11	61413468	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.384615
11	61413555	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.230769
11	62539665	A->G	-	ENSG00000250659	AP001363.1	antisense	Intergenic	.	.	Alu	0.3
11	62840420	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.2
11	62840701	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.125
11	62840940	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.136364
11	64857179	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.25
11	64857259	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.2
11	64858267	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	64858461	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.214286
11	64858479	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.222222
11	64859303	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.142857
11	64859457	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.125
11	64859482	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.08
11	65419875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
11	65470136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	65660794	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.166667
11	65660796	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.166667
11	65660915	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.461538
11	65660917	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.181818
11	65660976	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.375
11	65661192	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.545455
11	66630527	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66631328	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66633403	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.230769
11	66633409	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.461538
11	66648463	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.272727
11	66648757	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66649214	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66649224	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66649447	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.1875
11	66649470	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.421053
11	67149900	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.111111
11	67149984	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.142857
11	67151844	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67151845	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67294670	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.272727
11	67294680	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.181818
11	67682754	A->G	-	.	.	.	Intergenic	.	.	Alu	1
11	68045680	A->G	+	ENSG00000110719	TCIRG1	protein_coding	Intergenic	.	.	Alu	0.157895
11	68087373	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.3
11	68087406	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68087419	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.181818
11	68088826	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68088836	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68094535	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.153846
11	68095215	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68490980	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.125
11	72735145	A->G	-	ENSG00000186635	ARAP1	protein_coding	Intergenic	.	.	Alu	0.181818
11	72811470	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
11	72812036	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
11	72812052	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
11	78263377	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	78263550	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	78276383	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.3
11	78287866	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.230769
11	78287874	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.363636
11	78288129	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	78288188	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.285714
11	78288235	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.333333
11	78288251	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.125
11	78291383	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	78313411	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.190476
11	78314101	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.238095
11	78330908	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0909091
11	78330929	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	78330930	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0555556
11	78330944	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	78331002	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.307692
11	78331008	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.275862
11	78331011	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.258065
11	78331018	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.1
11	78331063	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	78331093	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	78331322	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.176471
11	78331331	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.444444
11	78331357	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.178571
11	78331426	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.103448
11	78331429	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0769231
11	78331491	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.217391
11	78331517	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0769231
11	78342569	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0769231
11	78383706	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.117647
11	78388574	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.0952381
11	78390383	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.0909091
11	78390394	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.1
11	78390467	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.375
11	78390473	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.307692
11	78390477	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.2
11	78390542	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.230769
11	78391233	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.0869565
11	78400685	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.125
11	78405210	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.0833333
11	78406440	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.105263
11	78406516	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	78406596	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	78409419	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	78413988	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.117647
11	78415065	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.176471
11	78422268	A->G	+	ENSG00000254420	AP003086.2	antisense	Intergenic	.	.	Alu	0.157895
11	82689836	A->G	+	ENSG00000245832	MIR4300HG	lincRNA	Intergenic	.	.	Alu	0.25
11	83179485	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.3
11	85954908	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
11	85954909	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	85955101	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
11	85959393	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.181818
11	85959448	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.153846
11	85959453	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.181818
11	85959509	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.384615
11	85959511	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.307692
11	85971479	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0625
11	85971624	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.37037
11	85971700	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.458333
11	85971879	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.214286
11	85971958	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.1875
11	85971960	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.125
11	85971984	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.15
11	85972056	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.25
11	85998600	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.272727
11	85998610	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.25
11	86010455	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0769231
11	86010487	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0740741
11	86025234	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.181818
11	86037660	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.2
11	86037672	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.142857
11	86039814	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.125
11	86046881	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0869565
11	86046910	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.1
11	86049970	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.25
11	86049995	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.117647
11	86050105	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.105263
11	86054887	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.190476
11	86055230	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.111111
11	86055247	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0909091
11	96328027	A->G	-	ENSG00000184384	MAML2	protein_coding	Intergenic	.	.	Alu	0.272727
12	10184992	A->G	+	ENSG00000165685	TMEM52B	protein_coding	Intergenic	.	.	Alu	0.111111
12	10185764	A->G	-	ENSG00000165685	TMEM52B	protein_coding	Intergenic	.	.	Alu	0.0425532
12	10187178	A->G	+	ENSG00000165685	TMEM52B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	10187843	A->G	+	ENSG00000165685	TMEM52B	protein_coding	Intergenic	.	.	Alu	0.166667
12	10216161	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.125
12	10216326	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0606061
12	10216633	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0555556
12	10216706	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.148148
12	10216707	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0740741
12	10216714	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.142857
12	10218387	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.133333
12	10219120	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	10219192	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.111111
12	11658255	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.107143
12	11658335	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0869565
12	11658336	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0869565
12	11690639	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.125
12	11692911	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.181818
12	11702857	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.117647
12	25222037	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.666667
12	25229994	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.3
12	25230001	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.454545
12	25230030	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.181818
12	25248226	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.230769
12	25248244	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.153846
12	27034606	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.2
12	27034661	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.142857
12	27034702	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.272727
12	27034703	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.363636
12	31965090	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.2
12	31968961	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.2
12	31969314	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.181818
12	31993318	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31994269	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
12	31994290	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
12	31994389	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
12	31994395	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31994398	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31994415	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31994994	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
12	31995558	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
12	31995559	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31996617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31996618	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31996621	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	32498704	A->G	+	ENSG00000139132	FGD4	protein_coding	Intergenic	.	.	Alu	0.0952381
12	32498792	A->G	+	ENSG00000139132	FGD4	protein_coding	Intergenic	.	.	Alu	0.181818
12	32498800	A->G	+	ENSG00000139132	FGD4	protein_coding	Intergenic	.	.	Alu	0.25
12	42222494	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.285714
12	42222528	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.214286
12	42222530	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.529412
12	42222552	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.15
12	42226417	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.105263
12	42352701	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.384615
12	42360011	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42360551	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.181818
12	42360552	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.307692
12	42360576	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.25
12	42360596	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.25
12	42360621	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.307692
12	42360660	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.272727
12	42360723	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.181818
12	42360754	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.545455
12	42360755	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.545455
12	42376606	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.153846
12	42376670	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.25
12	45751724	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.3
12	46215442	A->G	-	ENSG00000111371	SLC38A1	protein_coding	Intergenic	.	.	Alu	0.2
12	46215556	A->G	-	ENSG00000111371	SLC38A1	protein_coding	Intergenic	.	.	Alu	0.230769
12	46215572	A->G	-	ENSG00000111371	SLC38A1	protein_coding	Intergenic	.	.	Alu	0.133333
12	48697016	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.181818
12	48697317	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.272727
12	54501728	A->G	+	ENSG00000123338	NCKAP1L	protein_coding	Intergenic	.	.	Alu	0.230769
12	55778209	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.210526
12	55778219	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.117647
12	55778311	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.2
12	55778314	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.12
12	55778316	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0769231
12	55778426	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.5
12	55778727	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55778737	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.416667
12	55778777	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.272727
12	55778778	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0909091
12	55778787	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0869565
12	55778790	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0833333
12	55778798	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.291667
12	55778802	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0909091
12	55778804	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0909091
12	55778807	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0909091
12	55778822	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55778823	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55778846	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.214286
12	55778861	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.133333
12	55778895	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.142857
12	55778914	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.285714
12	55778932	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.416667
12	55787056	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.133333
12	55787137	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	62262043	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.181818
12	62264012	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.133333
12	62282197	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.2
12	62282207	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.25
12	62333322	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.294118
12	62333360	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.125
12	62333406	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.133333
12	62333408	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.133333
12	62333412	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.2
12	62476699	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.181818
12	62492965	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.0769231
12	62509367	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.307692
12	62509377	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.166667
12	62513343	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.2
12	62515804	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.2
12	64478415	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.181818
12	64613677	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.333333
12	66194159	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0425532
12	66194181	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0526316
12	66195891	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.2
12	66195904	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	67291893	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.2
12	68615436	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68615437	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68615438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68615442	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68615469	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68615501	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68615510	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.172414
12	68615538	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.129032
12	68615539	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.16129
12	68616510	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68616511	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.210526
12	68616516	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.25
12	68616527	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.130435
12	68617795	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68617828	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0625
12	68617864	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68619025	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0862069
12	68619087	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.12
12	68620675	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.178571
12	68620788	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68622911	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0408163
12	68622916	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.130435
12	68622927	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68622953	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.047619
12	68622963	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0612245
12	68622976	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0555556
12	68625665	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68625666	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.157895
12	68625671	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1
12	68625775	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68625801	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68627850	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0625
12	68628054	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0425532
12	68629050	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1
12	68629056	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68629116	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0444444
12	68629120	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0416667
12	68629126	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0416667
12	68629132	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0625
12	68629169	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0625
12	68629179	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0434783
12	68630697	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.047619
12	68632853	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0555556
12	68633660	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68633749	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68636455	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0625
12	68636486	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.08
12	68636528	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0689655
12	68636614	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.09375
12	68638754	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0882353
12	68638762	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0555556
12	68638800	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0740741
12	68638842	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.107143
12	68638845	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0740741
12	68638896	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68644868	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68644960	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68644961	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68644973	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68647495	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.5
12	68817927	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.363636
12	68817937	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.181818
12	68818032	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.6
12	68818033	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.3
12	68821957	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68821980	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	68822020	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	69505147	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.7
12	70283388	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.117647
12	71616102	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.636364
12	71616163	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.214286
12	71616210	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.384615
12	71657771	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.244444
12	71657786	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.228571
12	71657823	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.125
12	71657867	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.108696
12	71658482	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0571429
12	71658568	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.4
12	71661114	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.4
12	71661147	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0869565
12	71661179	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.272727
12	71661181	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.291667
12	71847627	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.3
12	76076893	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.3
12	76396630	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76396638	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.5
12	76396645	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.181818
12	76396672	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.363636
12	76549543	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76549548	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.166667
12	76552242	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.105263
12	76552343	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.142857
12	76556693	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0714286
12	76556694	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.172414
12	76556760	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0909091
12	76556764	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0909091
12	76556801	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.4
12	76556802	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.214286
12	76556906	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.333333
12	76556920	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.333333
12	76557480	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.272727
12	76557493	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.214286
12	76557503	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.230769
12	76557530	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.25
12	76557532	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.692308
12	76557553	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.133333
12	79818476	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.133333
12	79819745	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.117647
12	79896431	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.153846
12	79898373	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.153846
12	79909515	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.142857
12	79909531	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.153846
12	79910250	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.545455
12	79910307	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.2
12	79923808	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.4
12	79923895	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.181818
12	79923896	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.181818
12	79923944	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.166667
12	79923961	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.181818
12	79923968	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.363636
12	79924521	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.307692
12	79924526	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.142857
12	79924540	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.272727
12	89642690	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0784314
12	89642725	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0681818
12	89642745	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0526316
12	89642782	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0512821
12	89642783	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.138889
12	89643845	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0425532
12	89643956	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0487805
12	89644022	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0555556
12	89644039	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.0416667
12	92105130	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.181818
12	92128052	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0869565
12	92129237	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.105263
12	92129329	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.1
12	92129467	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.157895
12	93428079	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.3
12	93435543	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.117647
12	93436376	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.153846
12	93436661	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.230769
12	93437045	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.416667
12	93437546	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.307692
12	93437579	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.384615
12	93437580	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.230769
12	95264490	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.153846
12	96284780	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.166667
12	96293276	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96307678	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96329086	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.461538
12	96329177	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.15
12	96363774	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.133333
12	96373472	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.181818
12	96386431	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.230769
12	96391027	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.3
12	96391035	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.272727
12	96391040	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.25
12	98452281	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
12	98452282	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
12	98452315	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
12	98596860	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0487805
12	98596863	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0465116
12	98596869	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0465116
13	19710940	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.56
13	19710958	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.16
13	19711021	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	19711087	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.333333
13	19711132	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.1
13	19711551	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.1
13	19711552	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.190476
13	19711749	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0909091
13	19714591	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	19714610	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.08
13	19717409	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.129032
13	19717975	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.1
13	19849241	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.0625
13	19850998	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.142857
13	19851016	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.105263
13	19851046	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.111111
13	19964485	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.307692
13	19964499	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.133333
13	19964500	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.4
13	20023125	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.633333
13	20792336	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.153846
13	20829006	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.583333
13	20839155	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.363636
13	20840340	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.2
13	20999947	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.142857
13	21029536	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.166667
13	21031648	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.111111
13	21036230	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.2
13	21036304	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.210526
13	21036311	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.214286
13	21041244	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.25
13	21041245	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.181818
13	21041251	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.416667
13	21400822	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.285714
13	21401114	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.166667
13	21401167	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.133333
13	21401179	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.4375
13	21401184	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.6
13	21401243	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.7
13	21534057	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
13	22047554	A->G	+	ENSG00000276476	AL136962.1	lincRNA	Intergenic	.	.	Alu	0.166667
13	22051719	A->G	+	ENSG00000276476	AL136962.1	lincRNA	Intergenic	.	.	Alu	0.307692
13	22051850	A->G	+	ENSG00000276476	AL136962.1	lincRNA	Intergenic	.	.	Alu	0.153846
13	22067755	A->G	+	ENSG00000276476	AL136962.1	lincRNA	Intergenic	.	.	Alu	0.272727
13	22067811	A->G	+	ENSG00000276476	AL136962.1	lincRNA	Intergenic	.	.	Alu	0.117647
13	22067873	A->G	+	ENSG00000276476	AL136962.1	lincRNA	Intergenic	.	.	Alu	0.52381
13	22067884	A->G	+	ENSG00000276476	AL136962.1	lincRNA	Intergenic	.	.	Alu	0.2
13	24284479	A->G	+	ENSG00000273167	AL359736.1	protein_coding	Intergenic	.	.	Alu	0.25
13	25305422	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.181818
13	25306317	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.0952381
13	25306325	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.0952381
13	25317499	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.583333
13	27256887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
13	27651758	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.545455
13	27651824	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.15
13	27651832	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.291667
13	27652806	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.6
13	27653140	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.214286
13	27653161	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.3125
13	28186986	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.235294
13	28187059	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28187063	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28187743	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28187793	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.285714
13	28187830	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28187891	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.266667
13	28187928	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28187933	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28187956	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28187974	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28189441	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.357143
13	28189445	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28189526	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28189966	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.307692
13	28190000	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28190007	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.545455
13	28190008	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.545455
13	28194585	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28194607	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28194650	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28194738	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.190476
13	28194744	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0952381
13	28195146	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.315789
13	28195221	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28195244	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28195282	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.307692
13	28195323	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28195349	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.157895
13	28195636	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28197592	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28197634	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28197647	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28206556	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28272831	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	29576037	A->G	-	ENSG00000139514	SLC7A1	protein_coding	Intergenic	.	.	Alu	0.3
13	29576053	A->G	-	ENSG00000139514	SLC7A1	protein_coding	Intergenic	.	.	Alu	0.2
13	30742154	A->G	+	ENSG00000132965	ALOX5AP	protein_coding	Intergenic	.	.	Alu	0.2
13	32525586	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.2
13	32525622	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.266667
13	32525623	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.266667
13	32525638	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.6
13	40636013	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.4
13	40646731	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.272727
13	40646732	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.181818
13	40655153	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.4
13	40655287	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.2
13	40661917	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.3
13	40664018	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40913371	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
13	40913388	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.384615
13	40913395	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
13	40937954	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.125
13	40951745	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40958497	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.08
13	40976679	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0740741
13	40987458	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.333333
13	40987474	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40987477	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40987478	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40987499	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40993595	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.15
13	40997431	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0625
13	40997933	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0322581
13	40998012	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0540541
13	40998095	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.3125
13	40998111	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.12
13	40998139	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.147059
13	40998899	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0454545
13	41001196	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0769231
13	41001328	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.272727
13	41009007	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0487805
13	41009008	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0555556
13	41009965	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.133333
13	41010140	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	41010203	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.178571
13	41010214	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0606061
13	41011473	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0517241
13	41011477	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0344828
13	41011478	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.192982
13	41011479	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0517241
13	41011482	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0322581
13	41011552	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0967742
13	41011564	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.03125
13	41011572	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0428571
13	41011582	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.046875
13	41011796	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0408163
13	41012072	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.282609
13	41012077	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.108108
13	41012089	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	41012169	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.08
13	41012196	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.222222
13	41012201	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.28
13	41012579	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.047619
13	41024644	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
13	41032742	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	41032768	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
13	41053294	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.08
13	41053313	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0909091
13	44546896	A->G	-	ENSG00000102804	TSC22D1	protein_coding	Intergenic	.	.	Alu	0.181818
13	46128120	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.142857
13	46135254	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.571429
13	48239439	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.111111
13	48239449	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.105263
13	48239485	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.227273
13	48239536	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0869565
13	48240257	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.214286
13	48240306	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.111111
13	48240347	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.25
13	48240351	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.235294
13	48240388	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.105263
13	48989800	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.0909091
13	48989852	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.0909091
13	48989893	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.157895
13	49011333	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.230769
13	49011631	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.166667
13	49011663	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.142857
13	49011785	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.117647
13	49028108	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.2
13	49028353	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.583333
13	49028358	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.181818
13	50050656	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.4
13	50064952	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.454545
13	50104132	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.166667
13	50110908	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.2
13	50113266	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.1
13	50113394	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.0833333
13	50113399	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.230769
13	50113818	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.0869565
13	50113845	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.0645161
13	50113909	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.263158
13	52629840	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.117647
13	52629848	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.375
13	52629928	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.1
13	52629938	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.15
13	52630532	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.222222
13	72779186	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.181818
13	72779193	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.166667
13	72779194	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.583333
13	72779206	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.384615
13	72779268	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.470588
13	72779314	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.105263
13	98517530	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.111111
13	98547302	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.2
14	20478112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0422535
14	20478130	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
14	20478131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
14	20478136	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0595238
14	20478149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.360825
14	20478156	A->G	+	.	.	.	Intergenic	.	.	Alu	0.075
14	20478171	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0235294
14	20478184	A->G	+	.	.	.	Intergenic	.	.	Alu	0.191489
14	20478189	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
14	20478198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.020202
14	20478216	A->G	+	.	.	.	Intergenic	.	.	Alu	0.11
14	20478218	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03
14	20478219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.56
14	20478233	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0277778
14	20478238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.473684
14	20478271	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0423729
14	20478272	A->G	+	.	.	.	Intergenic	.	.	Alu	0.127119
14	20478285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176923
14	20478294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.122951
14	20478301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.297521
14	20478307	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0230769
14	20478315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.140496
14	20480279	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0808081
14	20480307	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0306122
14	20480313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
14	20480320	A->G	+	.	.	.	Intergenic	.	.	Alu	0.07
14	20480336	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294737
14	20480337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.369565
14	20480350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0568182
14	20480395	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0406504
14	20480404	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0222222
14	20480405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.425373
14	20480406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.402985
14	20480417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0518519
14	20480420	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0405405
14	20480502	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
14	20480561	A->G	+	.	.	.	Intergenic	.	.	Alu	0.021164
14	20480856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.290698
14	20480889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0648148
14	20480894	A->G	+	.	.	.	Intergenic	.	.	Alu	0.112245
14	20480942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0380952
14	20480946	A->G	+	.	.	.	Intergenic	.	.	Alu	0.380952
14	20480963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
14	20480966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0490196
14	20481007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.447619
14	20481047	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0985915
14	20481048	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0551724
14	20481103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0654762
14	21218518	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.388889
14	21218521	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.375
14	21218867	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.166667
14	21218925	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.125
14	21228671	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.3
14	21228922	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.142857
14	21232448	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.333333
14	21232974	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.642857
14	21232975	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.5
14	21239083	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.15
14	21239730	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0952381
14	21239765	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0833333
14	21244161	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0833333
14	21244164	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.08
14	21244191	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0666667
14	21244199	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0714286
14	21245380	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.178571
14	21245917	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.166667
14	21246047	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.133333
14	21246096	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.318182
14	21246119	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.142857
14	21246370	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.314286
14	21247757	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0606061
14	21248120	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0416667
14	21248121	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0612245
14	21248277	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0701754
14	21248324	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0454545
14	21252407	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0769231
14	21252408	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0769231
14	21252419	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1875
14	21252422	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1875
14	21252448	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1875
14	21252507	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0869565
14	21252540	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.12
14	21252586	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.190476
14	21253074	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0645161
14	21253220	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21253223	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.181818
14	21254883	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0555556
14	21256202	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0869565
14	21256743	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0555556
14	21256747	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.153846
14	21256752	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0789474
14	21257691	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0526316
14	21261071	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.291667
14	21261094	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.111111
14	21265566	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.135135
14	21265721	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0384615
14	21265737	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.106383
14	21265756	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0909091
14	21265764	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.326531
14	21266199	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.384615
14	21266267	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0769231
14	21266272	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.103448
14	21266355	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1
14	21266371	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.105263
14	21484044	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.166667
14	21500091	A->G	+	ENSG00000165819	METTL3	protein_coding	Intergenic	.	.	Alu	0.25
14	21500118	A->G	+	ENSG00000165819	METTL3	protein_coding	Intergenic	.	.	Alu	0.3
14	22916208	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.181818
14	22916984	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.2
14	24168892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	24168894	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	24168902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
14	24169952	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
14	30669454	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.384615
14	30694490	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.166667
14	30694551	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.230769
14	39178480	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.2
14	39427938	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.3
14	44943807	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.6
14	44943813	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.818182
14	45207503	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.2
14	49584074	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.117647
14	49584256	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.0571429
14	49584664	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.115385
14	49817321	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.363636
14	50193241	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.181818
14	50199070	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.285714
14	50484057	A->G	-	ENSG00000012983	MAP4K5	protein_coding	Intergenic	.	.	Alu	0.166667
14	50725659	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.294118
14	50817778	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.538462
14	51874585	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.2
14	51901263	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.1
14	51901376	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.142857
14	51901445	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.185185
14	51901456	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.0689655
14	51902808	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.1
14	51911597	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.1
14	51917781	A->G	+	ENSG00000258928	AL358333.2	antisense	Intergenic	.	.	Alu	0.277778
14	51917849	A->G	+	ENSG00000258928	AL358333.2	antisense	Intergenic	.	.	Alu	0.153846
14	51917861	A->G	+	ENSG00000258928	AL358333.2	antisense	Intergenic	.	.	Alu	0.307692
14	51918878	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.35
14	51918894	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.357143
14	51918925	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.125
14	51918942	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.545455
14	51919077	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.181818
14	51919086	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.25
14	51919087	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.333333
14	52323331	A->G	+	ENSG00000125384	PTGER2	protein_coding	Intergenic	.	.	Alu	0.214286
14	52712692	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.4
14	52712878	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.363636
14	52712879	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.181818
14	52712892	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.25
14	52717873	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.2
14	55055675	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.181818
14	55056530	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.153846
14	55061070	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.133333
14	55135071	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.125
14	55135074	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.277778
14	55135658	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.285714
14	55135664	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.176471
14	55135665	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.277778
14	55135666	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.210526
14	55135779	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.0869565
14	55135839	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.1875
14	55284132	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.352941
14	55284777	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55284825	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.285714
14	55289605	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55289635	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0952381
14	55289648	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1
14	55289673	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.136364
14	55289675	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55289757	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.176471
14	55289762	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1875
14	55290884	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55290889	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1875
14	55290949	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.285714
14	55291592	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.111111
14	55291716	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.272727
14	55291780	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.444444
14	55291891	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55292439	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55292453	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.285714
14	55292459	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55294406	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0909091
14	55294487	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55322189	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.3
14	58278050	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.363636
14	58278131	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.181818
14	58289941	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.3
14	58290789	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.117647
14	58314697	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.4
14	58362832	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.2
14	60256345	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.136364
14	60256378	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.08
14	60262972	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.181818
14	61329337	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.2
14	61329488	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.363636
14	61336814	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.133333
14	61337635	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.3
14	61337688	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.166667
14	61490658	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.125
14	61711279	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0697674
14	61741435	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.166667
14	61743229	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0769231
14	69614222	A->G	+	ENSG00000100647	SUSD6	protein_coding	Intergenic	.	.	Alu	0.181818
14	69689901	A->G	+	ENSG00000100647	SUSD6	protein_coding	Intergenic	.	.	Alu	0.117647
14	69691140	A->G	+	ENSG00000100647	SUSD6	protein_coding	Intergenic	.	.	Alu	0.111111
14	70918169	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.0882353
14	70921414	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.208333
14	70923981	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.133333
14	70924002	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.133333
14	70935338	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.368421
14	71339463	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0869565
14	71339480	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.111111
14	71340859	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.25
14	71340860	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.153846
14	71342027	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0555556
14	71342035	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	71342137	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.155556
14	71357582	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.222222
14	71358698	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.241379
14	71358706	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.178571
14	71359344	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.148148
14	71390592	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.375
14	71390654	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.380952
14	71402551	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.111111
14	71402611	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.0606061
14	71419963	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.307692
14	71432123	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.416667
14	71432128	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.3
14	71432271	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.153846
14	71433552	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73086192	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.125
14	73086193	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.117647
14	73086370	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.176471
14	73091466	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.181818
14	73143758	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73143827	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.25
14	73143830	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.166667
14	73143909	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.6
14	73144242	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.166667
14	73145522	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73145553	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.210526
14	73145577	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.117647
14	73145614	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.1
14	73145845	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.363636
14	73145851	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.4
14	73145852	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.272727
14	73145911	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.363636
14	73145930	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.25
14	73145931	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.166667
14	73145986	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.538462
14	73145987	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73193095	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.2
14	73370998	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.5
14	73371000	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.125
14	73371018	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.3125
14	73371291	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.357143
14	73371292	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.384615
14	73371364	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	1
14	73407042	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.4
14	73407044	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.2
14	73407208	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.230769
14	73407283	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.192308
14	73407303	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.0909091
14	73407434	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.0588235
14	73407982	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.15
14	73407983	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.65
14	73408043	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.133333
14	73408060	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.384615
14	73408063	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.166667
14	73449089	A->G	-	ENSG00000133961	NUMB	protein_coding	Intergenic	.	.	Alu	0.4
14	73890799	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.307692
14	73894520	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.3
14	74697913	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.272727
14	74698384	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.363636
14	85939332	A->G	+	ENSG00000258733	LINC02328	lincRNA	Intergenic	.	.	Alu	0.125
14	91469697	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.266667
14	91469709	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.230769
14	91479147	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.105263
14	91479654	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0769231
14	91479659	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0769231
14	91479679	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.103448
14	91480801	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.291667
14	91480833	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0833333
14	91481183	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91481223	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.117647
14	91481246	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0909091
14	91481248	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.136364
14	91481285	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0740741
14	91481296	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0689655
14	91502374	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91503098	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.153846
14	91507139	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.25
14	91507156	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.105263
14	91507226	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.153846
14	92661630	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.105263
14	92662910	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.142857
14	92662914	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.111111
14	92662923	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.444444
14	92662950	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.105263
14	92662995	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.214286
14	92662996	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.133333
14	92663073	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.266667
14	92663080	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.117647
14	92663085	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.35
14	93321350	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.166667
14	93322342	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.25
14	93322974	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.153846
14	93323038	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.176471
14	94058811	A->G	-	ENSG00000089737	DDX24	protein_coding	Intergenic	.	.	Alu	0.4
15	25426986	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	25429656	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.230769
15	25429663	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.333333
15	25429802	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.266667
15	25431536	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	25431544	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.214286
15	25433353	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.142857
15	25433825	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.130435
15	25433943	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.904762
15	25433945	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.285714
15	25433948	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.619048
15	25434320	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.181818
15	25437321	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.176471
15	30937645	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.416667
15	30937646	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.25
15	30937647	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.25
15	30937683	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.230769
15	30937729	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.357143
15	30937769	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.25
15	30937923	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.142857
15	30937925	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.846154
15	30937937	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.333333
15	30937947	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.125
15	30937992	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.363636
15	30938062	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.363636
15	30938075	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.2
15	34246798	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.2
15	34247261	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.307692
15	34247273	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.142857
15	34249325	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.2
15	40975804	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
15	41940100	A->G	-	ENSG00000103966	EHD4	protein_coding	Intergenic	.	.	Alu	0.190476
15	41969302	A->G	-	ENSG00000103966	EHD4	protein_coding	Intergenic	.	.	Alu	0.142857
15	42238251	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.181818
15	42238277	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.181818
15	44508870	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.2
15	44508913	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.3
15	44509266	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.272727
15	44553035	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.363636
15	44553038	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.2
15	45600580	A->G	+	ENSG00000104164	BLOC1S6	protein_coding	Intergenic	.	.	Alu	0.130435
15	49022427	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.181818
15	49022518	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.230769
15	49891859	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.181818
15	49891870	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.166667
15	50000171	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.363636
15	50000172	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.636364
15	50080632	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.333333
15	50099926	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.142857
15	50099952	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.125
15	50324010	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50338612	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.181818
15	50348360	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	50348446	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.181818
15	50348477	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.538462
15	50348518	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.181818
15	50426042	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.2
15	50427023	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.142857
15	50494759	A->G	+	ENSG00000259618	AC012170.3	lincRNA	Intergenic	.	.	Alu	0.181818
15	50736974	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50740194	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.181818
15	50740881	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.571429
15	51605404	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intergenic	.	.	Alu	0.181818
15	52022471	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.272727
15	52022497	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.181818
15	52031775	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.2
15	52031788	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.2
15	52048772	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.272727
15	52562987	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.125
15	52663723	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.3
15	56961074	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.2
15	56969602	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.4
15	56969617	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.363636
15	56977412	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.454545
15	56977413	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.272727
15	56977418	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.272727
15	58176342	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.0833333
15	58176357	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.0666667
15	58176358	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.0967742
15	58176432	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.192308
15	58176443	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.0571429
15	58176704	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.16
15	58176715	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.0714286
15	58176744	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.111111
15	58176791	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.25
15	58921841	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58930652	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	59010636	A->G	+	ENSG00000157450	RNF111	protein_coding	Intergenic	.	.	Alu	0.166667
15	59010662	A->G	+	ENSG00000157450	RNF111	protein_coding	Intergenic	.	.	Alu	0.166667
15	59671920	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.368421
15	59671967	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0952381
15	59671993	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0952381
15	59671994	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.1
15	59672014	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.105263
15	59672026	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.133333
15	59672029	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.125
15	59672345	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.166667
15	59672356	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.111111
15	59673825	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.125
15	59673897	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.142857
15	59673906	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.4
15	59683198	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.307692
15	59687624	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0769231
15	60372818	A->G	-	ENSG00000182718	ANXA2	protein_coding	Intergenic	.	.	Alu	0.125
15	60560633	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.181818
15	63124936	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.181818
15	63126281	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63126339	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.142857
15	63126356	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.230769
15	63128347	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.210526
15	63128365	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.473684
15	63128382	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.142857
15	63128387	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.12
15	63128437	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.130435
15	63128439	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63128440	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.125
15	63128909	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.0740741
15	63129011	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.3125
15	63193700	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.117647
15	63197612	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0666667
15	63199849	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.193548
15	63199855	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.15625
15	63200524	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.111111
15	63200533	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.277778
15	63213882	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.15
15	63214030	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.125
15	63214607	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.193548
15	63215759	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0833333
15	63215765	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.181818
15	63215779	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0740741
15	63215782	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.153846
15	63215953	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.176471
15	63216023	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0645161
15	63216292	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.125
15	63216293	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.176471
15	63216347	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.125
15	63216355	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.416667
15	63216409	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.142857
15	63216412	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.4375
15	63216429	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.333333
15	63216679	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.111111
15	63216684	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.105263
15	63216702	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.157895
15	63216704	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63216713	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.764706
15	63216788	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.181818
15	63216792	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.272727
15	63216815	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.153846
15	63222552	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.142857
15	63222618	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.142857
15	63222641	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63222667	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.117647
15	63230829	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.2
15	63235109	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.285714
15	63235145	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.25
15	63235161	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.5
15	63235214	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.1875
15	63235309	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.571429
15	63235339	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.4
15	63239669	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63241074	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.125
15	63241102	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.214286
15	63241114	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.181818
15	63241206	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.304348
15	63241221	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.125
15	63241222	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.25
15	63241275	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.15
15	63241294	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.222222
15	63241298	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.375
15	63241299	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.117647
15	63241334	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.1875
15	63257359	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.133333
15	63257360	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.133333
15	63257363	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.125
15	63258179	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.111111
15	63258202	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0833333
15	63258282	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0869565
15	63568221	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.375
15	63568275	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.176471
15	63568276	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.352941
15	63583384	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.176471
15	63692924	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.5
15	63692936	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64868282	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	64868283	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.1875
15	64868411	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64868442	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64868565	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.3125
15	64868582	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.105263
15	64868954	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64868994	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.263158
15	64868995	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.157895
15	64869015	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.25
15	64869024	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	64869029	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.173913
15	64869061	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.321429
15	64869062	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.178571
15	64869277	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.105263
15	64869294	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	64871904	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.25
15	64871915	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64871935	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.285714
15	64871938	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.357143
15	64872095	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64872096	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.294118
15	64872109	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.277778
15	64877106	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.133333
15	64879885	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.1875
15	64879892	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.333333
15	64879897	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64879911	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.25
15	64879930	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.333333
15	64880064	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64883008	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.125
15	64889512	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64889572	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64890241	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64890255	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64890286	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64890298	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.363636
15	64890303	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.785714
15	64902486	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.2
15	65668347	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.230769
15	65668373	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.230769
15	65668391	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.363636
15	65668697	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3
15	65668774	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.315789
15	65668775	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65668785	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.222222
15	65668807	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65734871	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65734910	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.363636
15	65734916	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65734983	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1875
15	65735206	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.277778
15	65735212	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65735278	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.6
15	65735285	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65735316	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65735321	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.428571
15	65735342	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.230769
15	65736357	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65737117	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.09375
15	65737136	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65737247	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0689655
15	65737252	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.12
15	65737258	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.172414
15	65737286	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65757372	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65762439	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.6
15	65777571	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65777580	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65777599	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65777620	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.105263
15	65777879	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65777951	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65777952	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65778029	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65779079	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.214286
15	65779582	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65779742	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65779939	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1875
15	65788347	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65788675	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.6
15	65788690	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65788760	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.416667
15	65789298	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.185185
15	65789324	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.115385
15	65789938	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0769231
15	66441205	A->G	+	ENSG00000169032	MAP2K1	protein_coding	Intergenic	.	.	Alu	0.142857
15	67074783	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.111111
15	67074851	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	67074855	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.0833333
15	67075781	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.142857
15	67075847	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.173913
15	67075864	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.15
15	67075865	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.1
15	67081937	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.636364
15	67113372	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.142857
15	67124057	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.117647
15	67124127	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.238095
15	67124153	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.176471
15	67124223	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.1
15	67124224	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.15
15	68059269	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.181818
15	68076409	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.181818
15	68076450	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72224680	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.2
15	72224697	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.166667
15	72481565	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.214286
15	72481901	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72498602	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.363636
15	72498634	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72499173	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.733333
15	72499210	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.105263
15	72518681	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72528668	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.454545
15	72543033	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.105263
15	72553752	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72553755	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.25
15	72553756	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.25
15	72561739	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72561853	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.375
15	72563083	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.214286
15	72563088	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72563150	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72563151	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.277778
15	72563190	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.133333
15	72577052	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.611111
15	72577083	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.1
15	72577112	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.384615
15	72577122	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.384615
15	72577124	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72577219	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.214286
15	72577248	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72577435	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72577489	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72577539	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.272727
15	72577570	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72577588	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.272727
15	72776221	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.210526
15	72776976	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.4
15	72777006	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.818182
15	72777007	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.227273
15	72778004	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.222222
15	72778005	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.111111
15	72778064	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.142857
15	72778127	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.0625
15	72778137	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.1
15	72778140	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.25
15	72778173	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.166667
15	72779472	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.125
15	72780613	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.3
15	72780687	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.16
15	73609548	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.181818
15	73609549	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.2
15	73613818	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.5
15	73614244	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.166667
15	73614276	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.333333
15	74549445	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.230769
15	74549495	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.117647
15	74556875	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.2
15	74557213	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.166667
15	74557234	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.2
15	75073726	A->G	+	ENSG00000138621	PPCDC	protein_coding	Intergenic	.	.	Alu	0.1875
15	75074183	A->G	+	ENSG00000138621	PPCDC	protein_coding	Intergenic	.	.	Alu	0.363636
15	75214096	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
15	75377442	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.153846
15	75382703	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.272727
15	75885220	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.166667
15	75885224	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.181818
15	75886249	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.2
15	75886638	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.166667
15	75886703	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.133333
15	75886737	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.181818
15	75886740	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.5
15	78022673	A->G	-	ENSG00000167202	TBC1D2B	protein_coding	Intergenic	.	.	Alu	0.272727
15	78468313	A->G	+	ENSG00000136381	IREB2	protein_coding	Intergenic	.	.	Alu	0.153846
15	78468383	A->G	+	ENSG00000136381	IREB2	protein_coding	Intergenic	.	.	Alu	0.2
15	78468391	A->G	+	ENSG00000136381	IREB2	protein_coding	Intergenic	.	.	Alu	0.2
15	78887879	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.173913
15	78887883	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.26087
15	78887934	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.08
15	78887959	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.142857
15	78890024	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	78890047	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0689655
15	78890126	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.09375
15	78890141	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.09375
15	78890585	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.15
15	78890594	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.157895
15	78890599	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.2
15	78898338	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0204082
15	78898340	A->G	+	.	.	.	Intergenic	.	.	Alu	0.020202
15	78898449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0412371
15	78899125	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0294118
15	78899206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0298507
15	78899230	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0747664
15	78899394	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0352941
15	78899476	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0266667
15	78899512	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0233918
15	78899519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0216216
15	78900521	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
15	78900531	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
15	78900953	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
15	78900970	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	78900983	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
15	78901023	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
15	78901097	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
15	78901123	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	79964412	A->G	-	ENSG00000140379	BCL2A1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	79964413	A->G	-	ENSG00000140379	BCL2A1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	80065638	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0909091
15	80065645	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0833333
15	80083157	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80083190	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80083198	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.722222
15	80083637	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.545455
15	80083729	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.176471
15	80083730	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.352941
15	80083731	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.117647
15	80083771	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.315789
15	80088290	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
15	80088334	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80088335	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80088416	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80088446	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80089436	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.214286
15	80089439	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.4
15	80089508	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.3
15	80089530	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
15	80091709	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.12
15	80091773	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.130435
15	80091842	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0882353
15	80091875	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0444444
15	80097069	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.193548
15	80097080	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0606061
15	80097086	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.117647
15	80097099	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0882353
15	80097100	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.457143
15	80097117	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.217391
15	80097141	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80097183	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.5
15	80097252	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.59375
15	80097261	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.233333
15	80097262	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.709677
15	80097274	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0714286
15	80097410	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.583333
15	80097414	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.384615
15	80097415	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.230769
15	80097483	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.545455
15	80097487	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80097488	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.818182
15	80097505	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.272727
15	80097555	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80097569	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.130435
15	80097570	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.304348
15	80099678	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.230769
15	80099720	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.125
15	80101414	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.294118
15	80101415	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.368421
15	80101445	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.1
15	80101446	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.285714
15	80101450	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80101958	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.105263
15	80103918	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.444444
15	80103928	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.105263
15	80103978	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80104266	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0740741
15	80104267	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.269231
15	80104272	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80104380	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.571429
15	80104398	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80104399	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.1
15	80104447	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.388889
15	80111998	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.4
15	80112017	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.421053
15	80112050	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80112618	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.272727
15	80112657	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.157895
15	80112658	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.105263
15	80118330	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80698271	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.117647
15	80701469	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.0909091
15	80708526	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.181818
15	80708546	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.272727
15	80708569	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.153846
15	80713689	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.181818
15	80713774	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.105263
15	80714143	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.142857
15	80714156	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.1875
15	80714224	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.176471
15	80725646	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.142857
15	80728846	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.166667
15	80729856	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.111111
15	80729857	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.210526
15	80729999	A->G	+	ENSG00000136379	ABHD17C	protein_coding	Intergenic	.	.	Alu	0.133333
15	80786267	A->G	+	ENSG00000103888	CEMIP	protein_coding	Intergenic	.	.	Alu	0.0769231
15	82824666	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.2
15	82824700	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.166667
15	82824701	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.181818
15	82824879	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.157895
15	82824941	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.545455
15	82824968	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0952381
15	82824972	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.142857
15	82825002	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.1875
15	82825004	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.133333
15	82825014	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.125
15	82825019	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.142857
15	82825046	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.153846
15	82825074	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.25
15	84712155	A->G	-	ENSG00000140612	SEC11A	protein_coding	Intergenic	.	.	Alu	0.363636
15	85586439	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.0952381
15	85587776	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.181818
15	85595200	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.0625
15	85657012	A->G	+	ENSG00000259367	AC087286.2	antisense	Intergenic	.	.	Alu	0.285714
15	85677786	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.25
15	85701520	A->G	+	ENSG00000259453	AC087286.4	sense_intronic	Intergenic	.	.	Alu	0.2
15	88642825	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.4
15	89094657	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.05
15	89097922	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.1875
15	89097965	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.0769231
15	89097970	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.0769231
15	89097977	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.130435
15	89097984	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.25
15	89097990	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.0833333
15	89097991	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.0769231
15	89098003	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.0740741
15	89098024	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.192308
15	89098080	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.15
15	89098132	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.103448
15	89099366	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.115385
15	89099380	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.0625
15	89099418	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.102564
15	89099429	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.05
15	89099510	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.133333
15	89099515	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	89099859	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.333333
15	89100309	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.153846
15	89100317	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.333333
15	89100344	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.428571
15	89100355	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.1875
15	89100775	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.15
15	89100790	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.130435
15	89100794	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.173913
15	89156618	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	89156677	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.166667
15	89156685	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.230769
15	89786636	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.214286
15	89786657	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.230769
15	89793620	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.153846
15	89796104	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.5
15	89796133	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.214286
15	89812654	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.0851064
15	91935058	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.2
15	91960190	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.272727
15	91969406	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.2
15	91969507	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.545455
15	91969527	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.153846
15	91969550	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.2
15	91969554	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.2
15	92060350	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.2
15	92890826	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.05
15	92894770	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.181818
15	92909678	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	92910068	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.153846
15	92910529	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.125
15	92910532	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	92911591	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	92911617	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.130435
15	92913731	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.153846
15	92916617	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.2
15	92916618	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.2
15	92917303	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.153846
15	92917304	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.133333
15	92917414	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	92917441	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	92917450	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.3
15	92917500	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.214286
15	92917513	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	92917516	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.416667
15	92986972	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.133333
15	92987454	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	92987480	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.416667
15	92987486	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.153846
15	92987571	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.363636
15	93015251	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	94262871	A->G	+	ENSG00000140563	MCTP2	protein_coding	Intergenic	.	.	Alu	0.0769231
15	99694532	A->G	+	ENSG00000068305	MEF2A	protein_coding	Intergenic	.	.	Alu	0.344828
16	10750077	A->G	+	ENSG00000103274	NUBP1	protein_coding	Intergenic	.	.	Alu	0.181818
16	11555406	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.181818
16	11563264	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.363636
16	11575983	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.384615
16	11578034	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.375
16	11578166	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.142857
16	11580336	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.416667
16	11580828	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.166667
16	11580832	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.368421
16	11580961	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0967742
16	11580984	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.166667
16	11581399	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0952381
16	11581402	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.142857
16	11581403	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.15
16	11581444	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.2
16	11581459	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.210526
16	11581532	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.153846
16	11581567	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.12
16	11581583	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.08
16	11707825	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.266667
16	11707830	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.266667
16	11707954	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.181818
16	11707962	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.272727
16	11707976	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.153846
16	11725954	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.0689655
16	11725968	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.0833333
16	11726038	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.142857
16	11726042	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.238095
16	11726468	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.166667
16	11726497	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.352941
16	11726504	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.384615
16	11726518	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.153846
16	11895331	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.363636
16	11905054	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.2
16	15015077	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.0571429
16	15015140	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.0714286
16	15015148	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.322581
16	15080630	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.428571
16	15956572	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.25
16	15956576	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15968122	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15968145	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15969006	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15969032	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.25
16	15969037	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15969093	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15969153	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15973794	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15973942	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.214286
16	15975054	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.176471
16	15976156	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.307692
16	16021459	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.35
16	16021462	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.1
16	16021610	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	16021623	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.125
16	16022931	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.333333
16	16022960	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.133333
16	16023055	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	16023086	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.590909
16	16023149	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.266667
16	16023166	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.230769
16	18800022	A->G	-	ENSG00000260342	AC138811.2	protein_coding	Intergenic	.	.	Alu	0.2
16	18800025	A->G	-	ENSG00000260342	AC138811.2	protein_coding	Intergenic	.	.	Alu	0.2
16	18848576	A->G	-	ENSG00000157106	SMG1	protein_coding	Intergenic	.	.	Alu	0.166667
16	18848859	A->G	-	ENSG00000157106	SMG1	protein_coding	Intergenic	.	.	Alu	0.230769
16	21424630	A->G	-	ENSG00000169246	NPIPB3	protein_coding	Intergenic	.	.	Alu	0.6
16	21466789	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
16	21506885	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.416667
16	21506899	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	21506900	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	21868384	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.181818
16	21954788	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.181818
16	21956039	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.210526
16	21956059	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.5
16	21956072	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.25
16	21956086	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.153846
16	21956087	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.357143
16	21956099	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.142857
16	21956390	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.2
16	21956391	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.181818
16	21956423	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.142857
16	21956424	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.285714
16	21956469	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.2
16	22310387	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.3
16	22477938	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
16	22493636	A->G	+	ENSG00000243716	NPIPB5	protein_coding	Intergenic	.	.	Alu	0.363636
16	22493638	A->G	+	ENSG00000243716	NPIPB5	protein_coding	Intergenic	.	.	Alu	0.181818
16	23508169	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.3
16	23508205	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.2
16	23839413	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.153846
16	23860813	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.2
16	23875112	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.181818
16	23875136	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.2
16	23924013	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.5
16	24746945	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.111111
16	27316106	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.307692
16	27316115	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.117647
16	27316236	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.153846
16	27317118	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.153846
16	28168267	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.384615
16	28168288	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.5
16	28168361	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.25
16	28168371	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28168823	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.1875
16	28168842	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.25
16	28168847	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.117647
16	28168894	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.454545
16	28827616	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.142857
16	28828825	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.272727
16	28828923	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.666667
16	28829005	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.2
16	28829007	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.3
16	28829011	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.25
16	28829132	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.153846
16	28829136	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.307692
16	28831381	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.1875
16	28831421	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.133333
16	28831428	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.142857
16	28831445	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.272727
16	28831722	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.454545
16	29556747	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
16	29557202	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
16	29557241	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.277778
16	29591793	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
16	29746327	A->G	+	ENSG00000260719	AC009133.3	antisense	Intergenic	.	.	Alu	0.2
16	30072031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
16	30072057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
16	31031813	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
16	31031814	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	31032432	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
16	31052127	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	31063011	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.0909091
16	31063195	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.075
16	31063279	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.105263
16	31063301	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.1
16	31063312	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.526316
16	31063330	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.533333
16	31063404	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.176471
16	31063406	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.1875
16	31063417	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.1875
16	31121221	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0394737
16	31121323	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.1
16	31121776	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.172414
16	31121816	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0526316
16	31358481	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.333333
16	31358504	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0487805
16	31358508	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.175
16	31358522	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.177778
16	31358527	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0784314
16	31358559	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0408163
16	31358584	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0784314
16	31358879	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0526316
16	31358918	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0638298
16	31358930	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.16
16	31359000	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.219178
16	31359017	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0273973
16	31359201	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.148649
16	31359238	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0337079
16	31359249	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.166667
16	31359262	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0340909
16	31359346	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0465116
16	31363516	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.230769
16	31363526	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.153846
16	31363527	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.166667
16	31363546	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31363547	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.5
16	31363563	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.166667
16	31363575	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.181818
16	31364213	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.125
16	31364241	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.285714
16	31364342	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.363636
16	31364352	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.384615
16	31364822	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31365800	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31366555	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.5
16	31366569	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.666667
16	31366616	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.357143
16	31366620	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.125
16	31366655	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.5
16	31366657	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.333333
16	31366699	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31366730	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.730769
16	31366750	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0833333
16	31366751	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.391304
16	31366781	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.111111
16	31368244	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.25
16	31368247	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.3125
16	31368251	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.230769
16	31368287	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.181818
16	31368293	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.416667
16	31368312	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.636364
16	31368342	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31368377	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.416667
16	31368378	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.333333
16	31368383	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.384615
16	31368391	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.153846
16	31368400	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.153846
16	31368404	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.142857
16	31368431	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.153846
16	31368463	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.272727
16	31456213	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
16	31456221	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
16	31891609	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.136364
16	31891753	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.115385
16	31891754	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.16
16	31891768	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.137931
16	31892129	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.114286
16	31892310	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.419355
16	31892315	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.125
16	31892338	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.0882353
16	31892381	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.206897
16	48369630	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.1
16	48369666	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.111111
16	48559529	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.0549451
16	48604354	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.181818
16	48608089	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.2
16	48608958	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.166667
16	48608970	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.181818
16	50033743	A->G	+	ENSG00000205423	CNEP1R1	protein_coding	Intergenic	.	.	Alu	0.2
16	50164250	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.2
16	50164891	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.166667
16	50164892	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.166667
16	50180197	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.2
16	50746258	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.125
16	50749046	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.166667
16	56940406	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.515152
16	56940446	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.217391
16	56940472	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.15
16	56940479	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.315789
16	56940481	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.105263
16	56940516	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.125
16	56940580	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.166667
16	56940706	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.190476
16	56940707	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.1
16	56940747	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.105263
16	56940810	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.08
16	56940813	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.111111
16	56940859	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.304348
16	67041522	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.2
16	67041552	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.181818
16	67078779	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.181818
16	67464032	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.1875
16	67476779	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.153846
16	67476785	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.272727
16	67478365	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.181818
16	67591978	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	69380575	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.2
16	69380594	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.3
16	69571213	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0769231
16	69571236	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0909091
16	69575268	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.272727
16	69575527	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.214286
16	69576730	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.125
16	69578968	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69580318	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.153846
16	69580321	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.142857
16	69580346	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.5
16	69580410	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.230769
16	69580795	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.272727
16	69580862	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.5
16	69580919	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.125
16	69582145	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69583303	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69583449	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1
16	69583450	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1
16	69584039	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69584106	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69589975	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69590070	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.142857
16	69590099	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.133333
16	69590113	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.375
16	69590131	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69591011	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.176471
16	69591012	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1875
16	69591141	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.272727
16	69591747	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.142857
16	69591796	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.25
16	69591810	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.285714
16	69591830	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.25
16	69592280	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.117647
16	69598127	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69614233	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69617554	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69617555	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69617591	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.3
16	69617727	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.4375
16	69617994	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69618037	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.266667
16	69618038	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.4
16	69618064	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.142857
16	69618065	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.428571
16	69626163	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69626164	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.153846
16	69631755	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69634172	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1
16	69634211	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1
16	69635150	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69637966	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69638010	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0952381
16	69638033	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1
16	69638035	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.263158
16	69638067	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0952381
16	69638096	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1875
16	69679027	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.4
16	69689644	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.3
16	71743780	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.153846
16	71743846	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.166667
16	71750483	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.166667
16	71750593	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.181818
16	71750595	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.2
16	71750619	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.181818
16	71750620	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.272727
16	71750967	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.4
16	71751098	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.08
16	71754111	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.272727
16	71755355	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.181818
16	71755380	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.2
16	71760745	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.4
16	71769420	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.6
16	71773834	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.5
16	71926162	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.272727
16	71926203	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.2
16	75648962	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.157895
16	75649102	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.25
16	75650693	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.272727
16	75650697	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.25
16	80768691	A->G	-	ENSG00000166446	CDYL2	protein_coding	Intergenic	.	.	Alu	0.4
16	84978678	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.181818
16	84978785	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.181818
16	85560320	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	85560342	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.692308
16	85561047	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.529412
16	85561057	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.5
16	87391107	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.142857
16	87400415	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.181818
16	87401602	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.173913
16	87867995	A->G	-	ENSG00000103257	SLC7A5	protein_coding	Intergenic	.	.	Alu	0.153846
16	89348072	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89379590	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89405421	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.363636
16	89405918	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.25
16	89405927	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.5
16	89405947	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.4
16	89405993	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.3
16	89406028	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.333333
16	89419341	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.153846
16	89419345	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.307692
16	89450696	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89452042	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.142857
16	89452079	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.3
16	89452109	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89467229	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.352941
16	89467585	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89468002	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89471663	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89471677	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89477896	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89477897	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.166667
16	89516105	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.214286
16	89516127	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.214286
16	89516129	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.285714
16	89875026	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.166667
16	89875061	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.133333
16	89875063	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.153846
16	89887052	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.2
16	89888146	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.2
16	89888163	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.3
16	89888187	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.181818
16	89891765	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.181818
16	89891856	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.181818
17	16051709	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.454545
17	16383267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
17	16383273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
17	16383899	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	16384101	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
17	27297691	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.1875
17	28600221	A->G	+	ENSG00000227543	SPAG5-AS1	processed_transcript	Intergenic	.	.	Alu	0.133333
17	28666616	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.2
17	28666681	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.153846
17	28666691	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.166667
17	28669789	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.636364
17	28669793	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.727273
17	28669815	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.181818
17	28672624	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.2
17	28672936	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.166667
17	28946829	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.166667
17	29290452	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.363636
17	29753193	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.4
17	29753198	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29753199	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.363636
17	29753268	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.307692
17	29756715	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	29756760	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.1
17	29756793	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.166667
17	30135360	A->G	+	ENSG00000126653	NSRP1	protein_coding	Intergenic	.	.	Alu	0.272727
17	30959895	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	30959912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
17	30960341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	32450141	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.285714
17	32466271	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.2
17	32472340	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.142857
17	32475821	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.181818
17	32476211	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.272727
17	35062320	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.272727
17	36584898	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.666667
17	36587766	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.153846
17	36587788	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.117647
17	36587812	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.125
17	36588375	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	41851723	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
17	41851783	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
17	41851789	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
17	41852131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
17	41852176	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	41852216	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5625
17	41852243	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
17	41852289	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	41852290	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
17	41852534	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
17	41852556	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	41852608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
17	41852611	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
17	41852642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
17	41852643	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	41852691	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
17	41982884	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.333333
17	41983217	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.428571
17	41983249	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.181818
17	42327861	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.4
17	42385292	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.153846
17	42501515	A->G	+	ENSG00000033627	ATP6V0A1	protein_coding	Intergenic	.	.	Alu	0.2
17	42501518	A->G	+	ENSG00000033627	ATP6V0A1	protein_coding	Intergenic	.	.	Alu	0.3
17	44444690	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.3
17	44458750	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.307692
17	45467115	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.181818
17	45467148	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.157895
17	45467516	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.542857
17	45467595	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.05
17	45467598	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.325581
17	45467612	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.0512821
17	45467613	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.205128
17	45467661	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.0666667
17	45469876	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.181818
17	45470870	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.6
17	47312997	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0416667
17	47313043	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0212766
17	47313103	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0243902
17	47313139	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0357143
17	47313248	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0204082
17	47313476	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.04
17	47315369	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.2
17	47315370	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.2
17	47488787	A->G	-	ENSG00000228782	MRPL45P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
17	47599876	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.307692
17	47599897	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.230769
17	47599898	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.25
17	47599922	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.166667
17	47599960	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.357143
17	47600396	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.181818
17	50992571	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.111111
17	50992588	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.1
17	50992777	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.411765
17	50992786	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.111111
17	50992806	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	50996974	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	50997058	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	50997098	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51023696	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51023862	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51024133	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51027284	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.111111
17	51027388	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.117647
17	51027402	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51032235	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51032291	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.5
17	51032364	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51032701	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.380952
17	51032834	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.136364
17	51032851	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.285714
17	51032895	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.3125
17	51032896	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.1875
17	51037200	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.583333
17	51049733	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.133333
17	51049736	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.142857
17	51049742	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.181818
17	51066770	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.166667
17	51066816	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.166667
17	59625393	A->G	+	ENSG00000141367	CLTC	protein_coding	Intergenic	.	.	Alu	0.2
17	59693244	A->G	+	ENSG00000141378	PTRH2	protein_coding	Intergenic	.	.	Alu	0.461538
17	59693263	A->G	+	ENSG00000141378	PTRH2	protein_coding	Intergenic	.	.	Alu	0.142857
17	59693269	A->G	+	ENSG00000141378	PTRH2	protein_coding	Intergenic	.	.	Alu	0.133333
17	59693279	A->G	+	ENSG00000141378	PTRH2	protein_coding	Intergenic	.	.	Alu	0.363636
17	59693299	A->G	+	ENSG00000141378	PTRH2	protein_coding	Intergenic	.	.	Alu	0.166667
17	59747685	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.2
17	59836479	A->G	-	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.363636
17	59837008	A->G	-	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.0740741
17	59842491	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
17	59842599	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
17	59842603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
17	59842610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.215686
17	59842898	A->G	+	.	.	.	Intergenic	.	.	Alu	0.347826
17	59842906	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162162
17	59842991	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
17	59843007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
17	59843015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	59843827	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
17	59843834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
17	59843928	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
17	59843935	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
17	59844519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	61999800	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.181818
17	61999874	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62038350	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62038893	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.176471
17	62038901	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.133333
17	62041732	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.526316
17	62041736	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.111111
17	62041782	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.117647
17	62041815	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.285714
17	62041855	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.214286
17	62041856	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.384615
17	62041872	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	62042399	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.133333
17	62042438	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.153846
17	62042440	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.285714
17	62042486	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.230769
17	62042500	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.133333
17	62060462	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.307692
17	62060940	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.363636
17	62060980	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62171133	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	62589826	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.590909
17	62589830	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.769231
17	62589838	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.178571
17	62589877	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0588235
17	62589924	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.761905
17	62589933	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0869565
17	62589936	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	62589983	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.181818
17	62590351	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.3
17	62590425	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0606061
17	62590508	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.181818
17	62590741	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.09375
17	62590753	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0571429
17	62590755	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0588235
17	63836002	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.272727
17	63836008	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.384615
17	64468308	A->G	+	ENSG00000271605	MILR1	protein_coding	Intergenic	.	.	Alu	0.153846
17	64469660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	64469661	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	64509300	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.6
17	64509312	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.3
17	64812240	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0909091
17	64813800	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
17	64813801	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.291667
17	64813813	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.192308
17	64813851	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.115385
17	64813879	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.678571
17	64814169	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.47619
17	64814248	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0967742
17	64814251	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.40625
17	64814314	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0833333
17	65015022	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.133333
17	65015049	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.107143
17	65015066	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0869565
17	65015473	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.137931
17	65024994	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.166667
17	65025057	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.125
17	65025187	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.1
17	65032876	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0909091
17	65032914	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.117647
17	65038160	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0645161
17	65038161	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0645161
17	65038218	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.173913
17	65038320	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.166667
17	65038447	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.181818
17	65038653	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.555556
17	65043566	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.181818
17	65052227	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.2
17	65052322	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.111111
17	67134140	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.153846
17	67176671	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.454545
17	67177152	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.2
17	67177156	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.181818
17	67349157	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67349184	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.166667
17	67349198	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.727273
17	67349201	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67352257	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.2
17	67353586	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.153846
17	67354153	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.117647
17	67354197	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.5
17	67354210	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.2
17	67354324	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.529412
17	67354334	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.142857
17	67354353	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.117647
17	67354358	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.5
17	67358019	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.142857
17	67358060	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.642857
17	67358086	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.12
17	67358089	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67358105	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0689655
17	67358111	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0666667
17	67358116	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0645161
17	67358136	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0740741
17	67358142	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0833333
17	67358195	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.4375
17	67358196	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.470588
17	67358311	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.423077
17	67358322	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.217391
17	67358323	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0869565
17	67358350	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67358376	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.206897
17	67358381	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.666667
17	67358419	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67358424	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.56
17	67358440	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67358444	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.153846
17	67358446	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1
17	67358461	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.192308
17	67358521	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67358537	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.25
17	67363312	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.133333
17	67365068	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0952381
17	68126184	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0810811
17	68270388	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.117647
17	68270454	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.1
17	68275783	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.411765
17	68277205	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.153846
17	68277256	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0952381
17	68277268	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.1875
17	68277355	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.111111
17	68278688	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.2
17	68281004	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.25
17	68281088	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.2
17	68285823	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0714286
17	68285898	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0869565
17	68286742	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0526316
17	68286783	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0857143
17	68288205	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0555556
17	68289143	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0291262
17	68289236	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0305344
17	74468522	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.153846
17	74530932	A->G	-	ENSG00000178789	CD300LB	protein_coding	Intergenic	.	.	Alu	0.3
17	74530942	A->G	-	ENSG00000178789	CD300LB	protein_coding	Intergenic	.	.	Alu	0.2
17	74533563	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	74622076	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.1
17	74622083	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.235294
17	74622121	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.25
17	74622346	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.142857
17	74622364	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.05
17	75104552	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.08
17	75104724	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.0909091
17	75322997	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.266667
17	75324254	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.142857
17	75356260	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.142857
17	75356373	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.4
17	75367237	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.133333
17	75374352	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.909091
17	75375181	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75375187	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75376799	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75377863	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75383760	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75675869	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.2
17	75683230	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.3125
17	75683247	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.1875
17	75683257	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.375
17	75690458	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.2
17	76717630	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.3125
17	76719468	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.142857
17	76719471	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.294118
17	76719516	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.142857
17	76719531	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.428571
17	76719538	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.153846
17	76719896	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.2
17	76722629	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.173913
17	76722663	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.133333
17	76723057	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.5
17	76724183	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0833333
17	76724189	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0909091
17	76724199	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0909091
17	76724282	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.277778
17	76724286	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.111111
17	76725264	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.08
17	76725296	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.111111
17	76725306	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0740741
17	76728093	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.153846
17	77152015	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.1
17	77152045	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.166667
17	77152112	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	77152280	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.529412
17	77152281	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.705882
17	77152415	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.454545
17	77152416	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.454545
17	77152457	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.130435
17	77152491	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.2
17	78355608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	78377860	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	78377867	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	78377928	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	78378084	A->G	-	.	.	.	Intergenic	.	.	Alu	0.466667
17	78378085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	78378110	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
17	78379899	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78379931	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.1875
17	78404340	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.1875
17	78404351	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.125
17	78404393	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.111111
17	78404410	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.176471
17	78404480	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.129032
17	78404761	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0909091
17	78404765	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	78404790	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.210526
17	78404800	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.111111
17	78404860	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.214286
17	78410654	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78410657	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.230769
17	78410674	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.25
17	78422597	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78422598	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.2
17	78422615	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.545455
17	78422639	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.384615
17	78422709	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.285714
17	78422758	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.266667
17	78422912	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.176471
17	78422920	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.1875
17	78422940	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.263158
17	78422941	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78422975	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78422985	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.636364
17	78423002	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.214286
17	78423008	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78423038	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.2
17	78592981	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	78593030	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	78699281	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.105263
17	78699972	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78702897	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.266667
17	78702950	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.26087
17	78703312	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78703329	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.1875
17	78703380	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.571429
17	78720766	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78750739	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.111111
17	78751069	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.25
17	78758671	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.133333
17	78758673	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.133333
17	78763867	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.1875
17	78770034	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78770037	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78770481	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78770507	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78770557	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.428571
17	78770645	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78773219	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78773222	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.2
17	78773467	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.363636
17	78816252	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0909091
17	78816257	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0952381
17	78816271	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.473684
17	78816320	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.166667
17	78816367	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.2
17	78816543	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.1875
17	78816549	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.153846
17	78816595	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.157895
17	78817973	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.181818
17	78834137	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.25
17	78834138	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.166667
17	81881229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	81881230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	81886936	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81886942	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
17	82256340	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.181818
17	82257098	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.2
17	82258112	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.318182
17	82258160	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.615385
17	82263068	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.1
17	82268837	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.136364
17	82269034	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.181818
17	82269045	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.2
17	83124732	A->G	-	.	.	.	Intergenic	.	.	Alu	0.245902
17	83124774	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
17	83125067	A->G	-	.	.	.	Intergenic	.	.	Alu	0.185185
17	83125280	A->G	-	.	.	.	Intergenic	.	.	Alu	0.652174
17	83193750	A->G	+	.	.	.	Intergenic	.	.	Alu	1
17	83194075	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	83194874	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	83195062	A->G	-	.	.	.	Intergenic	.	.	Alu	0.386364
17	83198614	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	83199747	A->G	-	.	.	.	Intergenic	.	.	Alu	1
18	11890378	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intergenic	.	.	Alu	0.3
18	12310550	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.25
18	12310609	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.384615
18	12317237	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.166667
18	12318858	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.272727
18	12318888	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12319867	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.25
18	12319916	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.333333
18	12322046	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12322136	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.166667
18	12322139	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.333333
18	12322180	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.133333
18	12322181	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.5
18	12322223	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.142857
18	12322472	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.125
18	12850273	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.25
18	12850402	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.153846
18	13750783	A->G	+	ENSG00000101654	RNMT	protein_coding	Intergenic	.	.	Alu	0.125
18	20994441	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.142857
18	21018467	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.142857
18	21018468	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.214286
18	21019183	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.117647
18	21019184	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.222222
18	21019214	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.0909091
18	21019216	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.111111
18	21019227	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.105263
18	21019292	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.208333
18	21019337	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.2
18	21019343	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.2
18	21019350	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.15
18	21019358	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.117647
18	21019374	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.25
18	21032946	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.636364
18	21060637	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.3
18	21528723	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
18	21528751	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
18	21528808	A->G	-	.	.	.	Intergenic	.	.	Alu	0.615385
18	23532395	A->G	-	ENSG00000141458	NPC1	protein_coding	Intergenic	.	.	Alu	0.111111
18	23571296	A->G	-	ENSG00000141458	NPC1	protein_coding	Intergenic	.	.	Alu	0.181818
18	26049609	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.142857
18	26054814	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.583333
18	26054861	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.583333
18	26054918	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.272727
18	26081392	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.153846
18	26081394	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.142857
18	26081886	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.166667
18	36130977	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.25
18	36165980	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.2
18	36166046	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.166667
18	36166072	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.181818
18	36166099	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.1875
18	36793767	A->G	-	ENSG00000134779	TPGS2	protein_coding	Intergenic	.	.	Alu	0.166667
18	36793768	A->G	-	ENSG00000134779	TPGS2	protein_coding	Intergenic	.	.	Alu	0.25
18	36793942	A->G	-	ENSG00000134779	TPGS2	protein_coding	Intergenic	.	.	Alu	0.3
18	45953631	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.214286
18	47860035	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.5
18	47860050	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.166667
18	47860060	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.3
18	49389608	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.4
18	49389657	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.210526
18	49389660	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.105263
18	49389661	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.111111
18	49389747	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.111111
18	49389748	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.111111
18	49390164	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.214286
18	49390178	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.153846
18	49390193	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.4
18	49390330	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.181818
18	49390335	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.230769
18	49390604	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.272727
18	49390618	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.538462
18	49390644	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.181818
18	50880692	A->G	+	ENSG00000082212	ME2	protein_coding	Intergenic	.	.	Alu	0.133333
18	51178751	A->G	-	ENSG00000176624	MEX3C	protein_coding	Intergenic	.	.	Alu	0.181818
18	54156610	A->G	-	ENSG00000134046	MBD2	protein_coding	Intergenic	.	.	Alu	0.25
18	55545545	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.166667
18	55545546	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.142857
18	55545560	A->G	-	ENSG00000196628	TCF4	protein_coding	Intergenic	.	.	Alu	0.235294
18	56607357	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.571429
18	56607362	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.125
18	58679598	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0714286
18	58737857	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.142857
18	63396313	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.181818
18	63396318	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.416667
18	75237401	A->G	+	ENSG00000179981	TSHZ1	protein_coding	Intergenic	.	.	Alu	0.2
18	76470905	A->G	-	ENSG00000101493	ZNF516	protein_coding	Intergenic	.	.	Alu	0.2
18	77116039	A->G	-	ENSG00000197971	MBP	protein_coding	Intergenic	.	.	Alu	0.6
18	79099387	A->G	+	ENSG00000166377	ATP9B	protein_coding	Intergenic	.	.	Alu	0.5
18	79099388	A->G	+	ENSG00000166377	ATP9B	protein_coding	Intergenic	.	.	Alu	0.4
18	79099431	A->G	+	ENSG00000166377	ATP9B	protein_coding	Intergenic	.	.	Alu	0.307692
18	79119003	A->G	+	ENSG00000166377	ATP9B	protein_coding	Intergenic	.	.	Alu	0.5
18	80122069	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.153846
18	80122148	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.153846
18	80122149	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.0769231
19	10272017	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0547945
19	10272076	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0540541
19	10272204	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.102564
19	10272231	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0508475
19	10272234	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0545455
19	10272235	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0535714
19	10272723	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.111111
19	10272743	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.157895
19	10272795	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0526316
19	10272796	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0588235
19	10272797	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0857143
19	10272809	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0681818
19	10272861	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.230769
19	10272938	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0666667
19	10273097	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.238095
19	10273103	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0666667
19	10273104	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0666667
19	10273231	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0909091
19	10273235	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.130435
19	10273238	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.125
19	10273590	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.111111
19	10273604	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.114286
19	10273867	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.153846
19	10273997	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0952381
19	10275377	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0666667
19	10275610	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.130435
19	10275612	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10275613	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.263158
19	10276886	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10276963	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.153846
19	10277588	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0625
19	10278642	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.166667
19	10278716	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0869565
19	10278743	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.12
19	10278794	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.117647
19	10279316	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10279362	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.25
19	10279649	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.103448
19	10279689	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.277778
19	10279804	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.105263
19	10280639	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.166667
19	10280696	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.1
19	10280699	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.318182
19	10280709	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.125
19	10281799	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.103448
19	10281858	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0714286
19	10282348	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.1875
19	10282757	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.111111
19	10282788	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.105263
19	10282807	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.125
19	10282892	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.363636
19	10282893	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.333333
19	10282898	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.181818
19	10282902	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.166667
19	10282906	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.166667
19	10282938	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.153846
19	10283084	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.3
19	10659229	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.214286
19	10659251	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.153846
19	10930891	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.3
19	11450075	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.153846
19	12002904	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
19	12179411	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.454545
19	12625944	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.2
19	12646373	A->G	-	ENSG00000269242	AC010422.3	protein_coding	Intergenic	.	.	Alu	0.384615
19	12787055	A->G	-	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.3
19	12787056	A->G	-	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.3
19	12787116	A->G	-	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.142857
19	12787238	A->G	-	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.461538
19	12787239	A->G	+	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.357143
19	12787248	A->G	-	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.357143
19	13759727	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.2
19	13837909	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0217391
19	13838183	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0218978
19	13838364	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0235294
19	13838382	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0212766
19	13838465	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0288462
19	14374714	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	14382591	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0333333
19	14383010	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14383016	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.166667
19	14383056	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.3125
19	14383082	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.333333
19	14383393	A->G	-	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.272727
19	14383436	A->G	-	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.111111
19	14392792	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.363636
19	14399940	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.133333
19	14400227	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.4
19	14400282	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14400294	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.133333
19	14400365	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.272727
19	14400389	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.363636
19	14744674	A->G	-	ENSG00000127507	ADGRE2	protein_coding	Intergenic	.	.	Alu	0.272727
19	15322998	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.166667
19	15329493	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.214286
19	15356874	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.230769
19	15358440	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.153846
19	16077901	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16081436	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16082333	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16082836	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0909091
19	16083345	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16083810	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16083833	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.285714
19	16083908	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.307692
19	16083996	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1
19	16084004	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16084052	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.08
19	16084056	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16084066	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.25
19	16084134	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.475
19	16085216	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.105263
19	16085333	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0540541
19	16091533	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.230769
19	16093376	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.125
19	16562806	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.363636
19	16562847	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.363636
19	16562873	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.142857
19	16563056	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.272727
19	16563760	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.181818
19	17080639	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.272727
19	17081250	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17083823	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.4
19	17101427	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.3
19	17104588	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.117647
19	17104594	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.388889
19	17104608	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.117647
19	17104623	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17104628	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.142857
19	17104673	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.434783
19	17104687	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.0833333
19	17104688	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.12
19	17104689	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.208333
19	17105301	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17119756	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	17155532	A->G	+	ENSG00000268056	AC020913.1	antisense	Intergenic	.	.	Alu	0.3
19	17155582	A->G	+	ENSG00000268056	AC020913.1	antisense	Intergenic	.	.	Alu	0.363636
19	17161937	A->G	+	ENSG00000268056	AC020913.1	antisense	Intergenic	.	.	Alu	0.272727
19	18171440	A->G	+	ENSG00000268173	AC007192.1	protein_coding	Intergenic	.	.	Alu	0.125
19	18178209	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
19	18178235	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
19	18178236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
19	18178245	A->G	+	.	.	.	Intergenic	.	.	Alu	0.315789
19	18178276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
19	18178288	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
19	18178307	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
19	18178407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.283019
19	18178409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	18178410	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
19	18178469	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
19	18178481	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03125
19	18178503	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0597015
19	18178525	A->G	+	.	.	.	Intergenic	.	.	Alu	0.037037
19	18178554	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
19	18178580	A->G	+	.	.	.	Intergenic	.	.	Alu	0.355556
19	18178585	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0731707
19	18178598	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
19	18178599	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
19	18178606	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162162
19	18178753	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	18178756	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
19	18178775	A->G	+	.	.	.	Intergenic	.	.	Alu	0.37037
19	18178776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
19	18178780	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
19	18178793	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
19	18178805	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
19	18178815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
19	18178817	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
19	18178842	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
19	18178855	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
19	18178889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.348837
19	18178909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.145455
19	18178912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.109091
19	18178935	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
19	18178947	A->G	+	.	.	.	Intergenic	.	.	Alu	0.140351
19	18178949	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
19	18178963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
19	18179134	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
19	18179158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	18179169	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
19	18179170	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
19	18179183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
19	18179345	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
19	18179353	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
19	18179356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
19	18179398	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
19	18179406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
19	18179407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.291667
19	18179422	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
19	18179482	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
19	18179488	A->G	+	.	.	.	Intergenic	.	.	Alu	0.075
19	18179489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.159091
19	18179528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
19	18179624	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
19	18179625	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
19	18179633	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18179758	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
19	18179768	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
19	18179866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	18179977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
19	18179988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
19	18180051	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	18180377	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	18180421	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
19	18180430	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	18181393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	18181458	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
19	18181490	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18181512	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
19	18181513	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18181525	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	18181606	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	18181760	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	18181790	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
19	18181791	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	18181794	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	18276151	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	18908237	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.25
19	18908423	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.181818
19	18908886	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.3
19	18908996	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
19	19322115	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.2
19	19322127	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.5
19	19322417	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.785714
19	19322437	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.357143
19	19322439	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.133333
19	19322478	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.666667
19	19322493	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.307692
19	19424858	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.2
19	19435330	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.181818
19	19435336	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.153846
19	19435349	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.5625
19	19435350	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.125
19	19435389	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.142857
19	19435414	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.363636
19	19435671	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.272727
19	21021244	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.2
19	21021980	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.2
19	21147411	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.2
19	21290089	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	21304778	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.2
19	21304805	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.2
19	21316698	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.181818
19	21319514	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.133333
19	21319588	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.153846
19	21320132	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.3
19	21376609	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.636364
19	21376610	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.727273
19	21757071	A->G	-	ENSG00000197020	ZNF100	protein_coding	Intergenic	.	.	Alu	0.153846
19	23371283	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.272727
19	23371289	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.3
19	34186991	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.4
19	34187028	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.272727
19	34187404	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.153846
19	34187408	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.214286
19	34187559	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.181818
19	34198944	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.230769
19	35885143	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	35885169	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	35885209	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
19	35885738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	35885765	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	35885769	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	35885778	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
19	35885830	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	35885854	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
19	35885870	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	35891624	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0731707
19	35891625	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0843373
19	35891651	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0326087
19	35891652	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.134831
19	35891755	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.04
19	35891758	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0555556
19	35891759	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.163265
19	35891780	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.05
19	35891785	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.09375
19	35891804	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.37037
19	35891805	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.357143
19	35891810	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.153846
19	35891828	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.764706
19	35891961	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.733333
19	35891975	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.375
19	35891980	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.133333
19	35891998	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.107143
19	35891999	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.5
19	35892020	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.1
19	35892021	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.047619
19	35892086	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.047619
19	35892105	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.285714
19	35892123	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0289855
19	35892148	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0357143
19	35892149	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.103448
19	35892160	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0384615
19	35892167	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.038961
19	35892176	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.47561
19	35892184	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.025
19	35892198	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.057971
19	35892216	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.144928
19	35892219	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0273973
19	35892220	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0657895
19	35892222	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0945946
19	35892223	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.08
19	35892225	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0779221
19	35892255	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0727273
19	35892256	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0508475
19	35892275	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0677966
19	35892319	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.119048
19	35892324	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.5
19	35892325	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.075
19	35892438	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0666667
19	35892467	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.108108
19	35892468	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.184211
19	35892922	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0461538
19	35893057	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0333333
19	35893060	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0338983
19	35893061	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0677966
19	35893087	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.037037
19	35897352	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0625
19	35897366	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0606061
19	35897393	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0377358
19	35905550	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.166667
19	35906069	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.2
19	35906864	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.0952381
19	35906878	A->G	-	ENSG00000011600	TYROBP	protein_coding	Intergenic	.	.	Alu	0.0952381
19	35912965	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	35913253	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
19	35913507	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
19	43651531	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.153846
19	43651613	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.142857
19	43652756	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0408163
19	43652811	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0833333
19	43652878	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0465116
19	43652930	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0833333
19	43653723	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.105263
19	43653735	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.190476
19	43653762	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0769231
19	43655059	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0571429
19	43655120	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.2
19	43657960	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0909091
19	43658006	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.08
19	43659447	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0689655
19	43662253	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.214286
19	43662254	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.142857
19	43662389	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.133333
19	43662415	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.2
19	43662422	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.176471
19	43662446	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.153846
19	43662783	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.133333
19	43662814	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.142857
19	43663252	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.8
19	43663537	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0952381
19	43663547	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0952381
19	44750393	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.111111
19	44750704	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.136364
19	44752481	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.0526316
19	44755657	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.0571429
19	45005872	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.357143
19	45013314	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45013321	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45013329	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.25
19	45013822	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45014380	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45014433	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45014781	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.363636
19	45015064	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.227273
19	45015092	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0909091
19	45015100	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45017739	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45017746	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45018733	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45019082	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45019086	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45019114	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.25
19	45019116	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.318182
19	45019697	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.214286
19	45019700	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.307692
19	45019844	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45020288	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45020461	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45020466	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45021010	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.333333
19	45021081	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45033940	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45034005	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45035673	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	47310309	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	47310717	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.0666667
19	47310718	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.0666667
19	47311746	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.115385
19	47312134	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.153846
19	47318989	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.153846
19	47330902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	47330972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
19	47331000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
19	47331010	A->G	+	.	.	.	Intergenic	.	.	Alu	0.216216
19	47331054	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
19	47331106	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0512821
19	47331133	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0731707
19	47331500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	47335022	A->G	-	ENSG00000134830	C5AR2	protein_coding	Intergenic	.	.	Alu	0.2
19	47364595	A->G	+	ENSG00000134815	DHX34	protein_coding	Intergenic	.	.	Alu	0.125
19	47388040	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
19	47388056	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	47388063	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
19	47388070	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
19	51518375	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
19	51744260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
19	51969680	A->G	-	ENSG00000269235	ZNF350-AS1	antisense	Intergenic	.	.	Alu	0.2
19	51969681	A->G	-	ENSG00000269235	ZNF350-AS1	antisense	Intergenic	.	.	Alu	0.2
19	52926300	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.545455
19	52926564	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	52926829	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.166667
19	53541886	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.133333
19	53543286	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.117647
19	53563870	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.545455
19	53563873	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.181818
19	53563912	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.166667
19	53564333	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.117647
19	53564405	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.142857
19	53568189	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.666667
19	53568195	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.166667
19	53573615	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.2
19	54203509	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.117647
19	54203510	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.117647
19	54203528	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.117647
19	54203602	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0434783
19	54205848	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0645161
19	54212140	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.111111
19	54212145	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.111111
19	54212148	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.111111
19	54212150	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.105263
19	54212250	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0645161
19	54212267	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0588235
19	54212270	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.121212
19	54213071	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.2
19	54213072	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.2
19	54213142	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.133333
19	54213259	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.333333
19	54213266	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.375
19	54213268	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.1875
19	54213272	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.133333
19	54213284	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.153846
19	54246525	A->G	-	ENSG00000249189	AC245052.6	unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
19	54246530	A->G	-	ENSG00000249189	AC245052.6	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0833333
19	54246655	A->G	-	ENSG00000249189	AC245052.6	unprocessed_pseudogene	Intergenic	.	.	Alu	0.24
19	54246802	A->G	-	ENSG00000249189	AC245052.6	unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
19	54246905	A->G	-	ENSG00000249189	AC245052.6	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0487805
19	54311159	A->G	-	ENSG00000187116	LILRA5	protein_coding	Intergenic	.	.	Alu	0.0365854
19	54389877	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	54389939	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
19	54451802	A->G	+	ENSG00000167615	LENG8	protein_coding	Intergenic	.	.	Alu	1
19	54883030	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.125
19	54883693	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.125
19	54883713	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.1
19	54884936	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.166667
19	54886567	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.136364
19	54886568	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.0909091
19	54886580	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.130435
19	54892079	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
19	54892083	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
19	54892108	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
19	54892115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	54892159	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
19	54892240	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	54892241	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	54892253	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
19	54892507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	54892513	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	54892514	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
19	54892519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	54892535	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	54892692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	54892716	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	55015880	A->G	+	ENSG00000267265	AC011476.3	antisense	Intergenic	.	.	Alu	0.2
19	55043294	A->G	+	ENSG00000267265	AC011476.3	antisense	Intergenic	.	.	Alu	0.3
19	57906506	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.136364
19	57906544	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.565217
19	57906558	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.304348
19	57906573	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.176471
20	17677589	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.181818
20	17677623	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.25
20	19940120	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.166667
20	19942017	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.214286
20	19963957	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.181818
20	19964312	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.181818
20	19964345	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.142857
20	19998363	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.230769
20	19998368	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.153846
20	19998372	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.142857
20	19998512	A->G	+	ENSG00000132669	RIN2	protein_coding	Intergenic	.	.	Alu	0.133333
20	21364651	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.285714
20	21364657	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.181818
20	25314111	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.583333
20	25314210	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.181818
20	32199757	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.181818
20	32199758	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.181818
20	32853170	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.0869565
20	32853171	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.136364
20	32854012	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.26087
20	32854017	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.142857
20	33849480	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.2
20	34200636	A->G	+	ENSG00000101440	ASIP	protein_coding	Intergenic	.	.	Alu	1
20	34444515	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.142857
20	34468096	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.181818
20	34468164	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.363636
20	34469414	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.2
20	35712251	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.021978
20	35712272	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0240964
20	35717843	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.666667
20	35719485	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.16129
20	35719601	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.5
20	35719868	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0952381
20	35720529	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0952381
20	35720647	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.272727
20	35720725	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.105263
20	35720766	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35723872	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35723984	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.105263
20	35724087	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.130435
20	35727015	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0666667
20	35727173	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35728981	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.1
20	35736713	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.115385
20	35736736	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35736747	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.105263
20	35736880	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.3
20	35736885	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.181818
20	35737014	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0952381
20	35737085	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.111111
20	35737091	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.210526
20	35737108	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0833333
20	35737109	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0869565
20	35737135	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.1
20	35737148	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0952381
20	35737303	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.047619
20	35737307	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.05
20	35737478	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35737555	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.113636
20	35737618	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0833333
20	35737620	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0740741
20	35737660	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0487805
20	35737685	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.05
20	35737966	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0588235
20	35776019	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.272727
20	36936399	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	36936709	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.25
20	36936750	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.333333
20	38808158	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.196721
20	38808167	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0819672
20	38808672	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.113208
20	38808706	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.122807
20	38817985	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0769231
20	38818997	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0487805
20	38824317	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.125
20	38825417	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.15
20	38846813	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.125
20	38847486	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.157895
20	38847491	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.117647
20	38864063	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.333333
20	38864254	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.3
20	38865478	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.181818
20	38865848	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.230769
20	38865937	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.6
20	38866000	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.466667
20	38866004	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.166667
20	38866017	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.333333
20	38866887	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.272727
20	41036970	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.08
20	41037104	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	41038828	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.05
20	41038830	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0769231
20	41041989	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0425532
20	41042122	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0540541
20	41044865	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0444444
20	41044917	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.05
20	41044921	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.119048
20	41044927	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0789474
20	41044968	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0444444
20	41044971	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0526316
20	41056493	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	41056504	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.305556
20	41056531	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.047619
20	41056549	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.125
20	41056582	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0588235
20	41056585	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0566038
20	41056594	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0816327
20	41056620	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.209302
20	41056622	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.214286
20	41056672	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.285714
20	41056717	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41057114	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.105263
20	41057115	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.176471
20	41057119	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.214286
20	41057172	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.190476
20	41088274	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.142857
20	41093932	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.105263
20	41093954	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.214286
20	41093985	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.1875
20	41095115	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.129032
20	41095138	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.121212
20	41095152	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0555556
20	41095153	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	41104102	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.3
20	41104105	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.272727
20	41104160	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.285714
20	41105747	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	44502523	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.2
20	44502856	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.2
20	44511038	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.363636
20	44511078	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.166667
20	45033827	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.272727
20	45034866	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.3125
20	45045906	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.272727
20	45046247	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.4
20	45046314	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.2
20	48643811	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.166667
20	48643854	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.4
20	48643855	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.2
20	48926558	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.153846
20	48926598	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	48946943	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.2
20	49175047	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.166667
20	49175048	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.166667
20	49638157	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.3
20	49675204	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.1875
20	49684072	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.2
20	49684084	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.125
20	49684089	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.466667
20	49684373	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.2
20	49690039	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.111111
20	49690089	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.117647
20	49690096	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.166667
20	49690101	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.142857
20	49707690	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.292683
20	49707712	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.166667
20	49707717	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.1
20	49707722	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.321429
20	49707753	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.107143
20	49707813	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.6875
20	49707817	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.142857
20	49708068	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.307692
20	49708071	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.142857
20	49708162	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.333333
20	49708182	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.125
20	49708183	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.117647
20	49709521	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.0952381
20	49709659	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.136364
20	49709717	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.178571
20	49710690	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.153846
20	49711000	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.125
20	49827041	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.125
20	49827042	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.125
20	49827441	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.333333
20	49827442	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.166667
20	49827443	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.333333
20	49827444	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.333333
20	49827519	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.181818
20	49855860	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.2
20	49856675	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.2
20	49856702	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.3
20	49873224	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.181818
20	49942703	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.25
20	49943366	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.133333
20	49943382	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.25
20	50906090	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.2
20	50910504	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.117647
20	50910945	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.333333
20	50913059	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.3
20	50913085	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.266667
20	50913104	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.2
20	50913105	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.181818
20	50922815	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.142857
20	50922818	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.166667
20	50925884	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.181818
20	56420629	A->G	+	ENSG00000087589	CASS4	protein_coding	Intergenic	.	.	Alu	0.181818
20	56477738	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.125
20	56478272	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	56478286	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	56492264	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	56501868	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.214286
20	56506762	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.2
20	56506835	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.363636
20	56506840	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.454545
20	59000161	A->G	-	ENSG00000101160	CTSZ	protein_coding	Intergenic	.	.	Alu	0.230769
20	59000175	A->G	-	ENSG00000101160	CTSZ	protein_coding	Intergenic	.	.	Alu	0.166667
20	63597329	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.142857
20	63597423	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.4
20	63874152	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.105263
20	63874503	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.15
20	63874539	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.130435
20	63874594	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.117647
20	63874612	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.263158
20	63874637	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.105263
20	63903569	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.2
20	63903581	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.454545
21	14542700	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0204082
21	14542795	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0344828
21	14542800	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0769231
21	14542844	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0344828
21	14544175	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0319149
21	14544189	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.197917
21	14544218	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.030303
21	14544219	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.06
21	14544228	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.039604
21	14544230	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0425532
21	14979803	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.142857
21	15017285	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
21	29337850	A->G	+	ENSG00000156273	BACH1	protein_coding	Intergenic	.	.	Alu	0.181818
21	29338405	A->G	+	ENSG00000156273	BACH1	protein_coding	Intergenic	.	.	Alu	0.21875
21	33231822	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.238095
21	33231871	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.117647
21	33231876	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33231945	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.09375
21	33231949	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.0625
21	33363933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
21	33363935	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
21	33364321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
21	33364331	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
21	33380181	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0298507
21	33380218	A->G	-	.	.	.	Intergenic	.	.	Alu	0.03125
21	33380235	A->G	-	.	.	.	Intergenic	.	.	Alu	0.03125
21	33380280	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
21	33380383	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0416667
21	33405949	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0810811
21	33405974	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0434783
21	33406747	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.111111
21	33406760	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.117647
21	33406883	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0689655
21	33406917	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.115385
21	33415931	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.153846
21	33415936	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.5
21	33416124	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.166667
21	33423654	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33429422	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0327869
21	33429910	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.166667
21	33430032	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.105263
21	33430060	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.08
21	33430126	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.159091
21	33430127	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0888889
21	33430555	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.130435
21	33430572	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.173913
21	33430673	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.142857
21	33430700	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.235294
21	33430705	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.125
21	33431641	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.235294
21	33431671	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.105263
21	33431834	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.166667
21	34797885	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.176471
21	34854502	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.12
21	34854509	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0833333
21	34854538	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.263158
21	34872103	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0571429
21	35022660	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.307692
21	35022678	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.357143
21	35022715	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.3
21	35022783	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.111111
21	35023007	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.133333
21	35023010	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.6
21	35023140	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.533333
21	35023168	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.153846
21	35023194	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.133333
21	35023195	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.307692
21	35023239	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.230769
21	37375606	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.2
21	37375707	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.125
21	37375710	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.705882
21	37375724	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.133333
21	37376255	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.375
21	37376298	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.176471
21	37376324	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.12
21	37376344	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.363636
21	37376366	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.157895
21	37376388	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.222222
21	37376430	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.230769
21	37415667	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.142857
21	39259527	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.166667
21	44075652	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.3
21	44870284	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.117647
21	45650499	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.105263
21	45650530	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.15
21	45650599	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.153846
22	17212235	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.230769
22	17212299	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.0952381
22	17212473	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.214286
22	17626610	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.2
22	17627575	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.166667
22	17628238	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	17639935	A->G	+	ENSG00000099968	BCL2L13	protein_coding	Intergenic	.	.	Alu	0.2
22	17640628	A->G	+	ENSG00000099968	BCL2L13	protein_coding	Intergenic	.	.	Alu	0.181818
22	17745550	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.272727
22	17745567	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.181818
22	17762653	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.166667
22	17762671	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.230769
22	20572647	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.25
22	20572663	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.7
22	20572664	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.4
22	20572733	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.166667
22	20572737	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.272727
22	20573086	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.25
22	20573108	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.181818
22	20573168	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.166667
22	20573177	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.538462
22	20573242	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.357143
22	24574564	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0833333
22	26540397	A->G	-	ENSG00000128294	TPST2	protein_coding	Intergenic	.	.	Alu	0.111111
22	29281329	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.285714
22	29287897	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.1
22	29296862	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.142857
22	29296969	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.2
22	29296985	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.117647
22	29975815	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.181818
22	29977109	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.117647
22	31214491	A->G	+	ENSG00000182541	LIMK2	protein_coding	Intergenic	.	.	Alu	0.117647
22	31215065	A->G	+	ENSG00000182541	LIMK2	protein_coding	Intergenic	.	.	Alu	0.117647
22	31284194	A->G	+	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.166667
22	31287201	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.125
22	31287245	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.111111
22	36310187	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.111111
22	36310351	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.111111
22	36310402	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.1
22	36338661	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.181818
22	36338720	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.2
22	36365561	A->G	+	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36365600	A->G	+	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.133333
22	36365618	A->G	+	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.2
22	36365644	A->G	+	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.363636
22	36365696	A->G	+	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.133333
22	36365708	A->G	+	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.166667
22	36365972	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.214286
22	36517778	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.307692
22	36517845	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.105263
22	36517926	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.272727
22	36517927	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.272727
22	36517930	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.363636
22	36518475	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.363636
22	38176831	A->G	+	ENSG00000184381	PLA2G6	protein_coding	Intergenic	.	.	Alu	0.0625
22	38210811	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.166667
22	38210937	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.2
22	38210939	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.2
22	38210952	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.125
22	38502226	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0571429
22	38502239	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0714286
22	38502249	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0645161
22	38502314	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0645161
22	38502362	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0540541
22	38505005	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.111111
22	38505025	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0952381
22	38505037	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0454545
22	38505047	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0666667
22	38505110	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.111111
22	38751961	A->G	-	ENSG00000100242	SUN2	protein_coding	Intergenic	.	.	Alu	0.0512821
22	38953536	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.368421
22	38954093	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.25
22	38954097	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.375
22	38954257	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.83871
22	38954316	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.5
22	38954328	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.5
22	40092212	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.3
22	40950145	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
22	41109114	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.181818
22	41136276	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.2
22	41141730	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.2
22	41141877	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.2
22	41141939	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.2
22	41141942	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.133333
22	41141945	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.1875
22	41143227	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.181818
22	41143313	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.176471
22	41522218	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.181818
22	41522222	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.272727
22	43006776	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	43006807	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.133333
22	43006814	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.285714
22	46733019	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.2
22	46733391	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.181818
22	46733567	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.2
22	46733825	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.117647
22	46733845	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.2
22	46733870	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.0952381
22	46733876	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.26087
22	46733936	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.12
22	46733953	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.214286
22	46733954	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.0740741
22	49813362	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.333333
22	49813368	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.428571
22	49813417	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.411765
22	49813418	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.117647
22	49813450	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.214286
22	49813684	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.2
22	49813708	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.2
22	49818764	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	49818777	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.142857
22	49819177	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	49819335	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	49822677	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0740741
22	50540045	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0229885
22	50540472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.205882
22	50624132	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.636364
1	100042747	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.3
1	100394214	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.428571
1	100394215	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.333333
1	100394219	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.142857
1	100394232	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.230769
1	100410422	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.142857
1	100410439	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.125
1	100410460	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.375
1	100424899	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.363636
1	100425131	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.3
1	100426213	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.285714
1	100426323	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.357143
1	100426347	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.166667
1	100426348	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.363636
1	100426352	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.636364
1	100429928	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.363636
1	107854248	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.117647
1	107855557	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.333333
1	107855559	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.1875
1	107856857	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.181818
1	107856976	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	107949582	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.176471
1	108754222	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	108754256	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	108761789	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	109063514	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.030303
1	109063539	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0857143
1	109063550	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0898876
1	109063551	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0930233
1	109063557	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0232558
1	109063574	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0348837
1	109063598	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0410959
1	109063606	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0375
1	109063619	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.032967
1	109063620	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0454545
1	109063643	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0361446
1	109063645	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0609756
1	109063684	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0327869
1	109063968	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.25
1	109063990	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.24
1	109063992	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.133333
1	109064033	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.05
1	109064035	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.35
1	109064075	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.125
1	109064089	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.111111
1	109064101	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.176471
1	110886663	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.272727
1	110887103	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.166667
1	110887107	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.153846
1	110887138	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.352941
1	110887144	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.352941
1	111635666	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	111647753	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	111671172	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	112622972	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.2
1	112655356	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.315789
1	112655392	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.222222
1	112655397	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.25
1	112655588	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.08
1	112655611	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	112655637	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	112655638	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.137931
1	112655663	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	112655666	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.428571
1	112655692	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.125
1	112655702	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.45
1	112655735	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.235294
1	112665448	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	114742410	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	114742525	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	114753804	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.235294
1	114753816	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.3125
1	116565858	A->G	-	ENSG00000116815	CD58	protein_coding	Intergenic	.	.	Alu	0.2
1	120048038	A->G	-	ENSG00000134250	NOTCH2	protein_coding	Intergenic	.	.	Alu	0.166667
1	145776823	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.181818
1	145991398	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	149412631	A->G	+	ENSG00000271383	NBPF19	protein_coding	Intergenic	.	.	Alu	0.272727
1	149413105	A->G	+	ENSG00000271383	NBPF19	protein_coding	Intergenic	.	.	Alu	0.333333
1	149470403	A->G	+	ENSG00000271383	NBPF19	protein_coding	Intergenic	.	.	Alu	0.461538
1	149471650	A->G	+	ENSG00000271383	NBPF19	protein_coding	Intergenic	.	.	Alu	0.294118
1	149887390	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0704225
1	149887412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.151899
1	149887468	A->G	-	.	.	.	Intergenic	.	.	Alu	0.145455
1	149887489	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	150565442	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.107143
1	150570028	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0285714
1	150571326	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0465116
1	150571407	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	150580521	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
1	150611926	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.027933
1	150612013	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0233918
1	150612014	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0380117
1	150612044	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0280374
1	150612588	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0344828
1	150612589	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0350877
1	150612611	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0425532
1	150612624	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0406504
1	150612653	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0483871
1	150613092	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0373832
1	150613096	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0645161
1	150613102	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0636364
1	150613103	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0366972
1	150613108	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.034188
1	150613119	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0272727
1	150613120	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.027027
1	150613140	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0222222
1	150618546	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.181818
1	150618850	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.153846
1	150619215	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0909091
1	150725352	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	150725409	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
1	150725445	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	150726603	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	150726613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	150726622	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	150727075	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
1	150727079	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	150727185	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
1	150727186	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	150930695	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.266667
1	150930699	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.428571
1	150930703	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.230769
1	150930704	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.214286
1	151434064	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.142857
1	151434091	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.52
1	151434104	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151434144	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.357143
1	151434147	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.133333
1	151434362	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
1	151434379	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
1	151434417	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.25
1	153639862	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.181818
1	153639913	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.1
1	153639954	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.230769
1	153639957	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.285714
1	153639983	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.142857
1	153640579	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.2
1	153898631	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	153900613	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.3
1	153905254	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	153905259	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	154174671	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.3
1	154174672	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.2
1	154174703	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.2
1	154179730	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.166667
1	154179760	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.181818
1	155543883	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.214286
1	155543887	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.133333
1	155683573	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	155683612	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.277778
1	155683622	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.210526
1	155684209	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.3
1	155907360	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.3
1	155956263	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.272727
1	155956371	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.181818
1	155956372	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.166667
1	155956630	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.181818
1	156120465	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.125
1	156120662	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.142857
1	156122037	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.181818
1	156125869	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.133333
1	156132019	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.142857
1	156132117	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.1875
1	156132123	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.142857
1	156469325	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.181818
1	156469326	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0909091
1	156469379	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.117647
1	156469422	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.142857
1	156469525	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.133333
1	156469764	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.333333
1	156469774	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.307692
1	156469786	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.533333
1	156469834	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.181818
1	156470254	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.153846
1	156470256	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.142857
1	156471295	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.125
1	159011108	A->G	+	ENSG00000163565	IFI16	protein_coding	Intergenic	.	.	Alu	0.0857143
1	159013350	A->G	+	ENSG00000163565	IFI16	protein_coding	Intergenic	.	.	Alu	0.153846
1	159013357	A->G	+	ENSG00000163565	IFI16	protein_coding	Intergenic	.	.	Alu	0.2
1	160326372	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.2
1	161815292	A->G	+	ENSG00000118217	ATF6	protein_coding	Intergenic	.	.	Alu	0.272727
1	161866920	A->G	+	ENSG00000118217	ATF6	protein_coding	Intergenic	.	.	Alu	0.3
1	162574336	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.2
1	162592274	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.2
1	167241983	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.3
1	167241984	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.8
1	171487140	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171493713	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.2
1	171496832	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.117647
1	171496981	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.166667
1	171502895	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.176471
1	171502897	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.111111
1	171502958	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.1
1	171503282	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.333333
1	171503295	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.125
1	171503333	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.117647
1	171503439	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171527507	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.6
1	171527515	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.4
1	171527532	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171527578	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171527649	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.181818
1	171546743	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.384615
1	171546801	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171546804	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.333333
1	171546853	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.222222
1	171546857	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.25
1	171546861	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.333333
1	171546972	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171547031	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0731707
1	171547076	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0833333
1	171578312	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	171725787	A->G	-	ENSG00000117533	VAMP4	protein_coding	Intergenic	.	.	Alu	0.166667
1	171725815	A->G	-	ENSG00000117533	VAMP4	protein_coding	Intergenic	.	.	Alu	0.214286
1	171725960	A->G	-	ENSG00000117533	VAMP4	protein_coding	Intergenic	.	.	Alu	0.3
1	173944058	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.4
1	173944078	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.2
1	173945776	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
1	173945872	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.692308
1	173945879	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
1	173946106	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.2
1	173994271	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.2
1	173994378	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
1	174007498	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.3
1	174007677	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
1	176012231	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.230769
1	176020234	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.25
1	176020462	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	176141438	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.2
1	179909824	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.416667
1	179909832	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	182863921	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.117647
1	182863970	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.210526
1	182863971	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.166667
1	182864281	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.45
1	184969781	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.210526
1	184969804	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.142857
1	184969811	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.363636
1	184969968	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.105263
1	184969969	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.277778
1	184969974	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.3125
1	193163920	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.142857
1	193169383	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.166667
1	193169416	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.153846
1	193169422	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.266667
1	193169470	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.125
1	193169479	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.125
1	193171951	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.181818
1	193191529	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.153846
1	193191553	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.133333
1	193191606	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.333333
1	193191620	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.166667
1	193191621	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.222222
1	198679333	A->G	+	ENSG00000236278	PEBP1P3	processed_pseudogene	Intergenic	.	.	Alu	0.214286
1	198679336	A->G	+	ENSG00000236278	PEBP1P3	processed_pseudogene	Intergenic	.	.	Alu	0.133333
1	198679337	A->G	+	ENSG00000236278	PEBP1P3	processed_pseudogene	Intergenic	.	.	Alu	0.266667
1	198680374	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.0909091
1	198680405	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.1875
1	198921870	A->G	-	ENSG00000229989	MIR181A1HG	lincRNA	Intergenic	.	.	Alu	0.0606061
1	202749445	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.2
1	203777304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	203777308	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
1	203804420	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.166667
1	203809276	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.2
1	203816482	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.214286
1	203816490	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.214286
1	203816492	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.142857
1	203830646	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.333333
1	203830651	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203830688	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.214286
1	203830766	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.272727
1	203831128	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.3
1	203836481	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.2
1	204400201	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.181818
1	204534513	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.307692
1	204534588	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.1
1	204534600	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.266667
1	204534605	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.142857
1	204535780	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.153846
1	204536184	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.454545
1	204536197	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.272727
1	206561770	A->G	+	ENSG00000266094	RASSF5	protein_coding	Intergenic	.	.	Alu	0.0769231
1	206711351	A->G	+	ENSG00000162889	MAPKAPK2	protein_coding	Intergenic	.	.	Alu	0.142857
1	211264037	A->G	+	ENSG00000117625	RCOR3	protein_coding	Intergenic	.	.	Alu	0.4
1	212542359	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0540541
1	212542361	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
1	212542376	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
1	212542394	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
1	212542424	A->G	-	.	.	.	Intergenic	.	.	Alu	0.131579
1	217603869	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.25
1	217603873	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.181818
1	217603898	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.272727
1	223723059	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.454545
1	223723220	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.133333
1	223724715	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.181818
1	223742233	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.363636
1	223742235	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.272727
1	223742313	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.5
1	223742375	A->G	+	ENSG00000162909	CAPN2	protein_coding	Intergenic	.	.	Alu	0.3
1	223790291	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.272727
1	223790410	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.166667
1	223790436	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.1875
1	223790442	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.538462
1	223790449	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.230769
1	223790742	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.538462
1	223790785	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.272727
1	223822609	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	224390768	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.181818
1	224391665	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.3
1	224396839	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.181818
1	224399936	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.263158
1	224399941	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.227273
1	224411784	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.352941
1	224411838	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0740741
1	224411870	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0833333
1	224411925	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0731707
1	224417457	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.103448
1	224417461	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0740741
1	224417590	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.136364
1	226000790	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
1	226720894	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.230769
1	234933790	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
1	234934172	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	234984866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	235173313	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235209327	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.230769
1	235209359	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.4
1	235209386	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235209701	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235209728	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235209732	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235212182	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235231922	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235233275	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.214286
1	235233282	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.214286
1	235257548	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235258249	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0689655
1	235258285	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0952381
1	235258290	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1
1	235283872	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.5
1	235283873	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235283899	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.4
1	235283902	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235283903	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235284313	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235306322	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235307439	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235313205	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235313206	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235826709	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0487805
1	235826716	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.05
1	235826850	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.205128
1	235826851	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.05
1	235826862	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0526316
1	235826878	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0444444
1	235826901	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0677966
1	235827284	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.291667
1	235827331	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.1
1	235827343	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0952381
1	235827355	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0555556
1	235827361	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0465116
1	235861748	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.214286
1	235861767	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.166667
1	235861787	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.583333
1	243235491	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.363636
1	243240108	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.3
1	243240942	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.214286
1	243243741	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.9
1	243243746	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.3
1	243244634	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.142857
1	243244663	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.166667
1	243247421	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.125
1	243249208	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.08
1	243249293	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.2
1	243249296	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.285714
1	243288410	A->G	+	ENSG00000054282	SDCCAG8	protein_coding	Intergenic	.	.	Alu	0.16
1	246594648	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.190476
1	246594744	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.117647
1	246661332	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.4
1	246661392	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.2
1	246842065	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.153846
1	246879645	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.111111
1	246922194	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	246922197	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.107143
1	246922297	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.307692
1	246922523	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.347826
1	246922525	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.434783
1	246922562	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.117647
1	246922563	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	246922564	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.111111
1	246922571	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.105263
1	246922576	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.1
1	246922597	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.117647
1	246922613	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.117647
1	246922673	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.818182
1	246922920	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.2
1	246929797	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	246929872	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.277778
1	246929969	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	246930228	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.125
1	246930702	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.45
1	247155617	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.0869565
1	247155657	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.1
1	247155672	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.5
1	247155785	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.153846
1	247155798	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.105263
1	247155814	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.117647
1	247427581	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.284483
1	247428530	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.0882353
1	247428745	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.1
1	247428986	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.0540541
1	247429127	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.0625
1	247430792	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.235294
1	247430796	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.235294
1	247430836	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.212121
1	247430860	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.151515
1	247430879	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.0882353
1	247431090	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.227273
1	247431979	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.0740741
1	247432014	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.09375
1	247432094	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101274902	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0246914
2	101275194	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0810811
2	101275215	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.075
2	101275242	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.111111
2	101275282	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0333333
2	101284469	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.105263
2	101284481	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.111111
2	101284498	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.133333
2	101284573	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.153846
2	101284992	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.153846
2	101304285	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.166667
2	101713033	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.363636
2	101728733	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.3
2	101845584	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.3
2	108543249	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.375
2	108552840	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.3
2	108596716	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.157895
2	108596735	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	108597009	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.272727
2	108597010	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.272727
2	108597089	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
2	108597124	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
2	108597161	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.416667
2	108597169	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.166667
2	108610259	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
2	108622024	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.416667
2	108638080	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
2	108638126	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.214286
2	108738729	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.111111
2	108738839	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.133333
2	108739748	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.133333
2	108741719	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0588235
2	108742443	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0540541
2	108742487	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0701754
2	108742489	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0526316
2	108742511	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.233333
2	108742547	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.121212
2	108742566	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.05
2	108742808	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.384615
2	108742850	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.2
2	108742906	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.225806
2	108742918	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.230769
2	108742996	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.272727
2	108743036	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.12766
2	108743050	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	108743051	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0930233
2	108743356	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	108743458	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0645161
2	108743459	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	108743541	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.046875
2	108744146	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0714286
2	108744194	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0882353
2	108744214	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0526316
2	108744218	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.184211
2	108744228	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.184211
2	108744239	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	108744242	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	108744257	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.2
2	108744265	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.195122
2	108744293	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.116279
2	108744298	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0625
2	108744300	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0588235
2	108744325	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108744329	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.08
2	108744338	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0769231
2	108744345	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.173913
2	108773211	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0789474
2	108774339	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.131579
2	108774386	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.04
2	111472693	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.25
2	111472712	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.416667
2	111488592	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.3
2	111488606	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.466667
2	111488622	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.1875
2	111490133	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.115385
2	111490147	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.37931
2	111490218	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.210526
2	111490226	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.25
2	111490270	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.315789
2	112408865	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.2
2	112409534	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.153846
2	112409538	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.1875
2	112409580	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.2
2	112415677	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.2
2	112654733	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	112654734	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	112654750	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	112654811	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	112655073	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.176471
2	112655086	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	112655134	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.105263
2	112655135	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.578947
2	112655149	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.238095
2	112655152	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	112655221	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	112655245	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	112826923	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
2	112827002	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
2	112827010	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
2	112827036	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	112827103	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
2	112827121	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
2	112827219	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
2	112827283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
2	112827317	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
2	112827318	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
2	112827842	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
2	112828006	A->G	-	.	.	.	Intergenic	.	.	Alu	0.21875
2	112828012	A->G	-	.	.	.	Intergenic	.	.	Alu	0.135135
2	112828026	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
2	113751033	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.153846
2	113933253	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.290323
2	113933282	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.357143
2	113933490	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0526316
2	113933819	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.5
2	113936127	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	113936151	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0869565
2	117992408	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.181818
2	117992508	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.0952381
2	117992516	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.142857
2	117992517	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.2
2	117993802	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.111111
2	127323565	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127333933	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127334037	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	127334038	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	127334066	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127334086	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.12
2	127343871	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127343912	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.210526
2	127343953	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.133333
2	127344562	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.125
2	127344584	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	127345091	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.307692
2	127345114	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.125
2	127348153	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127363768	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127363781	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.272727
2	127363931	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127375672	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.238095
2	127376949	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.111111
2	127377004	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.130435
2	127377042	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.466667
2	127377055	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.133333
2	127382776	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.142857
2	128279695	A->G	-	ENSG00000136720	HS6ST1	protein_coding	Intergenic	.	.	Alu	0.153846
2	128279708	A->G	-	ENSG00000136720	HS6ST1	protein_coding	Intergenic	.	.	Alu	0.142857
2	128279713	A->G	-	ENSG00000136720	HS6ST1	protein_coding	Intergenic	.	.	Alu	0.153846
2	131080492	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131089095	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131089230	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131109132	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.125
2	131109151	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.133333
2	131113273	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.181818
2	131113287	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.333333
2	131113293	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.25
2	131145410	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.111111
2	131145411	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.210526
2	131145420	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.125
2	131145434	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.153846
2	131145441	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.153846
2	131514880	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3
2	131514970	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.454545
2	134929343	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.181818
2	135067843	A->G	+	ENSG00000115839	RAB3GAP1	protein_coding	Intergenic	.	.	Alu	0.2
2	135067860	A->G	+	ENSG00000115839	RAB3GAP1	protein_coding	Intergenic	.	.	Alu	0.3
2	135760029	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.166667
2	135760030	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	135760197	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.4
2	135760268	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.166667
2	135760271	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.363636
2	135760275	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.272727
2	142886915	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.166667
2	142890716	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.0588235
2	142890752	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.0740741
2	142894868	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.0714286
2	142895950	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.0769231
2	142896755	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.105263
2	142951336	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.142857
2	142951341	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.153846
2	143028751	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.357143
2	143028768	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.272727
2	143028769	A->G	+	ENSG00000115919	KYNU	protein_coding	Intergenic	.	.	Alu	0.272727
2	143610963	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.166667
2	143610964	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.181818
2	143737967	A->G	+	ENSG00000257277	AC092652.2	antisense	Intergenic	.	.	Alu	0.2
2	144314462	A->G	-	ENSG00000121964	GTDC1	protein_coding	Intergenic	.	.	Alu	0.133333
2	144314468	A->G	-	ENSG00000121964	GTDC1	protein_coding	Intergenic	.	.	Alu	0.333333
2	144314523	A->G	-	ENSG00000121964	GTDC1	protein_coding	Intergenic	.	.	Alu	0.4
2	144314564	A->G	-	ENSG00000121964	GTDC1	protein_coding	Intergenic	.	.	Alu	0.25
2	144314591	A->G	-	ENSG00000121964	GTDC1	protein_coding	Intergenic	.	.	Alu	0.8
2	144409794	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.176471
2	144409812	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.1875
2	144409837	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.166667
2	144409867	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.2
2	144410050	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.692308
2	151360024	A->G	+	ENSG00000123610	TNFAIP6	protein_coding	Intergenic	.	.	Alu	0.3
2	151421612	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.333333
2	151421684	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.1
2	151421706	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	151422702	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.4
2	152709943	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.272727
2	152710274	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.2
2	157331113	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
2	159715447	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.214286
2	159715519	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.153846
2	159715531	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.214286
2	159715598	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.25
2	159720206	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
2	159720209	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.2
2	159730090	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0588235
2	159731499	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.461538
2	159731564	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.097561
2	159731633	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0769231
2	159731957	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.307692
2	159732806	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.2
2	161152664	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.210526
2	161152835	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.3
2	161153523	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.121212
2	161153530	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.0833333
2	161166666	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0425532
2	161166667	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.130435
2	161166673	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0434783
2	161166778	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.108696
2	161167749	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0363636
2	161167752	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0350877
2	161167762	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.2
2	161167765	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.236364
2	161167766	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0555556
2	161167799	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0625
2	161167806	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.08
2	161167815	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.125
2	161167831	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.111111
2	161167898	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.238095
2	161167900	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.116279
2	161167901	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.15
2	161168540	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.115385
2	161168541	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.115385
2	161168575	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.285714
2	161168577	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.133333
2	161168578	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.2
2	161168583	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.1875
2	161168677	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.117647
2	161168712	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0833333
2	161168713	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.272727
2	161168775	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.333333
2	161168788	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0645161
2	161205884	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0588235
2	168475955	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.230769
2	168481161	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.4
2	172576057	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.181818
2	172576061	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.272727
2	172576133	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.416667
2	173124937	A->G	+	ENSG00000091436	MAP3K20	protein_coding	Intergenic	.	.	Alu	0.384615
2	173920702	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.153846
2	173921478	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.1875
2	173931262	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0408163
2	173931272	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	173931284	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0617284
2	173931285	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.05
2	173931307	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0265487
2	173931337	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.021978
2	173931455	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.05
2	173931532	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.153846
2	173931579	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0888889
2	173931615	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.097561
2	173931623	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.131579
2	173932257	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0517241
2	173932288	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.047619
2	173932289	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.047619
2	173932330	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0810811
2	173932362	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.148936
2	173932372	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.146341
2	173932447	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0961538
2	173932463	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.078125
2	173932464	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.031746
2	173932748	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.147059
2	173932749	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.147059
2	173932803	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.15625
2	173932825	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.36
2	173932834	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0689655
2	173932860	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0769231
2	173932870	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.172414
2	173932880	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.103448
2	173932892	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.258065
2	173932910	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.4
2	173932929	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0714286
2	173932945	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.151515
2	174216079	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.272727
2	174354869	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.181818
2	174375497	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.181818
2	174375901	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.2
2	174375919	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.166667
2	174375969	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.166667
2	174375986	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.166667
2	174375996	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.1875
2	174376049	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.2
2	174376059	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.230769
2	174376093	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.153846
2	174376134	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.4375
2	174376152	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.2
2	174377560	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.1
2	174377572	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.142857
2	174377646	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.166667
2	174577797	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.235294
2	174577862	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.105263
2	174579155	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.181818
2	175085332	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.2
2	175158328	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.166667
2	175159233	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.181818
2	175159236	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.181818
2	175159237	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.2
2	177214540	A->G	+	ENSG00000170144	HNRNPA3	protein_coding	Intergenic	.	.	Alu	0.1875
2	177243623	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.1
2	177243688	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.105263
2	177243731	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.307692
2	177243751	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0645161
2	177244218	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.166667
2	177244219	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.166667
2	177244855	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	177248542	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.4
2	177248972	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.181818
2	177248987	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.2
2	177248999	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.210526
2	177249051	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.21875
2	179247492	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	179259328	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.333333
2	179259329	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.133333
2	179259337	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.125
2	179259342	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.176471
2	179259369	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.117647
2	179260367	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	179260368	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	179260372	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	179260416	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.2
2	179260421	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.185185
2	186502316	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.3
2	186502327	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.25
2	186628544	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.3
2	186628545	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.6
2	186628548	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.272727
2	190885331	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.272727
2	190885337	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.153846
2	190886026	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.117647
2	190886078	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.136364
2	190886112	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.0606061
2	191011511	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	191011516	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.521739
2	191011527	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.137931
2	191011551	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	191011978	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.128205
2	191012023	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	191012196	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.171429
2	191012221	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.521739
2	191012329	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	191012333	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	191012334	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.107143
2	191012353	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.138889
2	191012354	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0555556
2	191012408	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.192308
2	191073436	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.25
2	191073504	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	191073507	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.2
2	191073607	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.181818
2	191073614	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.2
2	191141813	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.125
2	196141397	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0434783
2	196141471	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.173913
2	196141487	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0555556
2	196141510	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0487805
2	196141537	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.244444
2	196141547	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.422222
2	196141576	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.135135
2	196141577	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.111111
2	196141643	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.291667
2	196141649	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.25
2	196141651	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.24
2	196142150	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.44
2	196142187	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.108108
2	196142197	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.131579
2	196142223	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0444444
2	196142237	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0408163
2	196142261	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0526316
2	196152245	A->G	-	ENSG00000272211	AC114760.2	antisense	Intergenic	.	.	Alu	0.0714286
2	196153057	A->G	-	ENSG00000272211	AC114760.2	antisense	Intergenic	.	.	Alu	0.0307692
2	196159578	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.119048
2	197491921	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.25
2	197492075	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	199965551	A->G	+	ENSG00000162972	MAIP1	protein_coding	Intergenic	.	.	Alu	0.2
2	200819207	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.222222
2	200819218	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	200855231	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.1
2	200855825	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.2
2	200856212	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.3
2	200856312	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.1
2	202275722	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.230769
2	202275733	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202275769	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
2	202276163	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.230769
2	202276177	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202281239	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.2
2	202285242	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202285488	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.133333
2	202299034	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.125
2	202299064	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	203301336	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203301480	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203491690	A->G	-	ENSG00000173166	RAPH1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203521084	A->G	-	ENSG00000173166	RAPH1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203525253	A->G	-	ENSG00000173166	RAPH1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203525254	A->G	-	ENSG00000173166	RAPH1	protein_coding	Intergenic	.	.	Alu	0.230769
2	206018635	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.266667
2	206018730	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.166667
2	206018780	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.125
2	206018846	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.3
2	206078857	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.333333
2	210003098	A->G	+	ENSG00000197713	RPE	protein_coding	Intergenic	.	.	Alu	0.428571
2	218227443	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218227455	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.380952
2	218227512	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218227526	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.097561
2	218227527	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0714286
2	218232709	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.166667
2	218232761	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	218232783	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.388889
2	218232838	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0606061
2	218232850	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.176471
2	218236747	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.166667
2	218237300	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.153846
2	218237361	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.222222
2	218237401	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.25
2	218237446	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.08
2	218237461	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0740741
2	218237471	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0689655
2	218237700	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.1875
2	218237706	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218237747	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.1
2	218237750	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.210526
2	218237756	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.315789
2	218237776	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0689655
2	218237842	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0689655
2	218246709	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.3
2	218246729	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.181818
2	218246794	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218246795	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218254597	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
2	218254611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
2	218254624	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
2	218254720	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
2	218254748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
2	218368518	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
2	218371006	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
2	218371025	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
2	222874102	A->G	+	ENSG00000123983	ACSL3	protein_coding	Intergenic	.	.	Alu	0.105263
2	222904151	A->G	+	ENSG00000123983	ACSL3	protein_coding	Intergenic	.	.	Alu	0.2
2	222929570	A->G	+	ENSG00000123983	ACSL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	222930150	A->G	+	ENSG00000123983	ACSL3	protein_coding	Intergenic	.	.	Alu	0.28
2	224517507	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.181818
2	224517561	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.357143
2	224517573	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.133333
2	224517591	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.176471
2	224517663	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.263158
2	224521513	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.125
2	224521559	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.08
2	224521634	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0909091
2	224521635	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.113636
2	224522638	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.15
2	224522814	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224530115	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224530127	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.363636
2	224530783	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	224530791	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	224530795	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.227273
2	224530825	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.333333
2	224531156	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224531173	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.230769
2	224531185	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224531215	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.1875
2	224531224	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224531227	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.285714
2	224531258	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224531264	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224535224	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0869565
2	224535255	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.105263
2	224535295	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.176471
2	224535311	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.5
2	224580562	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.285714
2	224581775	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.285714
2	224582003	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	227369608	A->G	-	ENSG00000168955	TM4SF20	protein_coding	Intergenic	.	.	Alu	0.142857
2	227369622	A->G	-	ENSG00000168955	TM4SF20	protein_coding	Intergenic	.	.	Alu	0.214286
2	227370592	A->G	-	ENSG00000168955	TM4SF20	protein_coding	Intergenic	.	.	Alu	0.16
2	227371474	A->G	+	ENSG00000168955	TM4SF20	protein_coding	Intergenic	.	.	Alu	0.153846
2	227490428	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.125
2	227490457	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.142857
2	227501959	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.166667
2	227503071	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.125
2	227518665	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.166667
2	227519008	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.105263
2	227519027	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.125
2	227519053	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.153846
2	227519059	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.133333
2	227519110	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.125
2	229260060	A->G	-	ENSG00000153823	PID1	protein_coding	Intergenic	.	.	Alu	0.131148
2	229262642	A->G	-	ENSG00000153823	PID1	protein_coding	Intergenic	.	.	Alu	0.102041
2	229833516	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.333333
2	229883985	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	229901002	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.272727
2	229913077	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.166667
2	229915165	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.133333
2	229915935	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	229915941	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	229917860	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.181818
2	230715881	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.1875
2	233071012	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233071092	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233071166	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.214286
2	233071168	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.461538
2	233361701	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.230769
2	233361717	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.214286
2	233361816	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.2
2	233362003	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.3
2	237704328	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.363636
2	237704351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.2
2	237704354	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.272727
2	237704428	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	237705406	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.210526
2	237705407	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.25
2	237706667	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.2
2	237706705	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.25
2	237706721	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.315789
2	237706728	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.1
2	237706740	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.142857
2	237706753	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.333333
2	237706825	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.117647
2	237706828	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.15
2	237710940	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0526316
2	237710963	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0645161
2	237710967	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0882353
2	238191093	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.133333
2	238191245	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.25
2	238266925	A->G	-	ENSG00000132326	PER2	protein_coding	Intergenic	.	.	Alu	0.272727
2	238266927	A->G	-	ENSG00000132326	PER2	protein_coding	Intergenic	.	.	Alu	0.272727
2	240002125	A->G	-	ENSG00000130414	NDUFA10	protein_coding	Intergenic	.	.	Alu	0.2
2	241318881	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.333333
3	100286639	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0952381
3	100286872	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.105263
3	100287136	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.208333
3	100287161	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.444444
3	100287213	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.230769
3	100287238	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.107143
3	100287239	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.16
3	100287809	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.142857
3	100287819	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0833333
3	100287871	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.146341
3	100288043	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0833333
3	100291319	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.153846
3	100291349	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.125
3	100291373	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.111111
3	100291399	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.217391
3	100291417	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.4
3	100291421	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.08
3	100291461	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.111111
3	100291462	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.166667
3	100291467	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.117647
3	100291866	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.111111
3	100291883	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.3125
3	100291895	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.25
3	100291962	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.363636
3	100291993	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.142857
3	100292027	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.111111
3	100314143	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.2
3	100314557	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.333333
3	100314564	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.166667
3	105443028	A->G	+	ENSG00000170017	ALCAM	protein_coding	Intergenic	.	.	Alu	0.307692
3	105443100	A->G	+	ENSG00000170017	ALCAM	protein_coding	Intergenic	.	.	Alu	0.2
3	105848958	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.166667
3	105848965	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.181818
3	105848972	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.157895
3	105848989	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.136364
3	105849578	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.347826
3	108139072	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	113726559	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.333333
3	113726581	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.5
3	113726632	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.166667
3	113726661	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.2
3	113726902	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.230769
3	113730103	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.25
3	113730214	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.153846
3	113730218	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.428571
3	119303848	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.0740741
3	119303851	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.0769231
3	119303869	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.111111
3	119303875	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.227273
3	119303895	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.0769231
3	119303924	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.166667
3	119303934	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.266667
3	119303940	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.117647
3	119304748	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.208333
3	119304774	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.210526
3	119304775	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.0952381
3	119304844	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.230769
3	120001275	A->G	-	ENSG00000082701	GSK3B	protein_coding	Intergenic	.	.	Alu	0.454545
3	122835385	A->G	+	ENSG00000138463	DIRC2	protein_coding	Intergenic	.	.	Alu	0.272727
3	127778795	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.25
3	127778812	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.153846
3	127778825	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.571429
3	127778854	A->G	-	ENSG00000074416	MGLL	protein_coding	Intergenic	.	.	Alu	0.857143
3	128728511	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.230769
3	128728567	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128728580	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.272727
3	128728725	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0869565
3	128730435	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.142857
3	128732683	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.333333
3	128739366	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128739393	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	128739987	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	128741606	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.230769
3	128741645	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	128741857	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0952381
3	128741872	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.227273
3	128741915	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.125
3	128741934	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128743664	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.176471
3	128743681	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.25
3	128743703	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.166667
3	128744060	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.235294
3	128747045	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.214286
3	128747052	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.125
3	128747231	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.153846
3	128757047	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.133333
3	129229992	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
3	133579657	A->G	+	ENSG00000091527	CDV3	protein_coding	Intergenic	.	.	Alu	0.272727
3	136657359	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.181818
3	136657427	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.636364
3	136670670	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136702813	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.230769
3	136740234	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.230769
3	138816154	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.2
3	138819876	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.214286
3	138832474	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.133333
3	138832705	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.181818
3	138832707	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.181818
3	141888702	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.214286
3	143017833	A->G	+	ENSG00000163714	U2SURP	protein_coding	Intergenic	.	.	Alu	0.411765
3	146542252	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.243243
3	146542306	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.210526
3	146543116	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.170455
3	146543176	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.116883
3	150433860	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.133333
3	150433939	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.28
3	150433954	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.217391
3	150433955	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.125
3	150434032	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	150434210	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.307692
3	150434282	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.125
3	150434307	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.272727
3	150434339	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.133333
3	150434351	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.25
3	152285886	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	152287068	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.142857
3	152287107	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.25
3	152287139	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.153846
3	152318584	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.125
3	152329441	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0714286
3	158814401	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.181818
3	158815037	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.333333
3	160223519	A->G	-	ENSG00000244040	IL12A-AS1	antisense	Intergenic	.	.	Alu	0.0689655
3	160223525	A->G	-	ENSG00000244040	IL12A-AS1	antisense	Intergenic	.	.	Alu	0.0666667
3	160223608	A->G	-	ENSG00000244040	IL12A-AS1	antisense	Intergenic	.	.	Alu	0.0666667
3	160223671	A->G	-	ENSG00000244040	IL12A-AS1	antisense	Intergenic	.	.	Alu	0.166667
3	160534485	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	160534861	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	160776704	A->G	+	ENSG00000163590	PPM1L	protein_coding	Intergenic	.	.	Alu	0.357143
3	160776861	A->G	+	ENSG00000163590	PPM1L	protein_coding	Intergenic	.	.	Alu	0.153846
3	160776873	A->G	+	ENSG00000163590	PPM1L	protein_coding	Intergenic	.	.	Alu	0.153846
3	169972662	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.214286
3	169972663	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.142857
3	169972689	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.125
3	169986826	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.272727
3	169987218	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.2
3	169987304	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.181818
3	170362254	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.133333
3	170362274	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.117647
3	170362744	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.097561
3	170364465	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.0645161
3	170367317	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.0952381
3	170367632	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.166667
3	170369423	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.153846
3	170369531	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.272727
3	172050636	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1
3	172051148	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0645161
3	172051183	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0588235
3	172051184	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.171429
3	172053547	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172053652	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
3	172053693	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.166667
3	172053700	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172136800	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172136820	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
3	172136837	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.25
3	172136867	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	172137527	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1875
3	172145913	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.272727
3	172145914	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172162016	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.178571
3	172162051	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0606061
3	172162117	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.08
3	172162226	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0512821
3	172163044	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0740741
3	172163059	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172163150	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.193548
3	172163191	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.105263
3	172163196	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.08
3	172165143	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172165278	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0952381
3	177167720	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	177167726	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	177167743	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177167768	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.111111
3	177167809	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.1875
3	177170702	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.3
3	177171084	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	177180860	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	179160824	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.357143
3	179371252	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.333333
3	179371278	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.1875
3	179374224	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.454545
3	180920779	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	180949435	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.111111
3	180949660	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.2
3	180950944	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.5
3	180950955	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.461538
3	180950957	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	180951005	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	180951126	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.5
3	180951148	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	182833384	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.3
3	182857194	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182894313	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182894420	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.125
3	183640852	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.125
3	185756752	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.117647
3	185788309	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.2
3	192893818	A->G	-	ENSG00000180611	MB21D2	protein_coding	Intergenic	.	.	Alu	0.2
3	192898301	A->G	-	ENSG00000180611	MB21D2	protein_coding	Intergenic	.	.	Alu	0.2
3	193628920	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.1
3	193629018	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	193629043	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.257143
3	193629053	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	193629055	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.114286
3	193629059	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.189189
3	193629511	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.454545
3	193629573	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.111111
3	194406292	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.026087
3	194406335	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0267857
3	194406344	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.027027
3	194408223	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.037037
3	194408293	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.589744
3	194408294	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.192308
3	194408316	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.592105
3	194463901	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0606061
3	194463917	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0606061
3	194464078	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.333333
3	194466531	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.590909
3	194471464	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.230769
3	194482343	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.113636
3	194482344	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0697674
3	194482755	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0454545
3	194482849	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0571429
3	194482851	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0625
3	194482865	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0740741
3	194578544	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0350877
3	194578878	A->G	+	.	.	.	Intergenic	.	.	Alu	0.031746
3	195370728	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195437631	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195438614	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.272727
3	195438679	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	195439352	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195439742	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.133333
3	195666989	A->G	+	ENSG00000215837	SDHAP2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
3	196052668	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.166667
3	196052925	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.176471
3	196057709	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0833333
3	196070504	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.210526
3	196070695	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.25
3	196070931	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0943396
3	196079577	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.210526
3	196241385	A->G	-	ENSG00000163959	SLC51A	protein_coding	Intergenic	.	.	Alu	0.454545
3	196906132	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.181818
3	196906141	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.181818
3	197751952	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.272727
3	197752098	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.2
3	197752110	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.5
4	101308553	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.214286
4	101308560	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.181818
4	101309005	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.428571
4	101309010	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.285714
4	101309011	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.583333
4	101313273	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.0909091
4	102342391	A->G	-	ENSG00000138821	SLC39A8	protein_coding	Intergenic	.	.	Alu	0.0714286
4	102342416	A->G	-	ENSG00000138821	SLC39A8	protein_coding	Intergenic	.	.	Alu	0.0638298
4	102342459	A->G	-	ENSG00000138821	SLC39A8	protein_coding	Intergenic	.	.	Alu	0.05
4	102511403	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0625
4	102511459	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0394737
4	102511493	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.109091
4	102511582	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0784314
4	102511596	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0714286
4	102511659	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0327869
4	102512453	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0857143
4	102512466	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0735294
4	102512478	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0285714
4	102570310	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.172414
4	102570342	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.151515
4	102733634	A->G	-	ENSG00000109323	MANBA	protein_coding	Intergenic	.	.	Alu	0.214286
4	105165301	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0952381
4	105185965	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.2
4	105185998	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.133333
4	105186119	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.133333
4	105214034	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.176471
4	105214037	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.111111
4	105214041	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.166667
4	105421894	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.2
4	109450092	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.181818
4	118701395	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.2
4	118787568	A->G	-	ENSG00000150961	SEC24D	protein_coding	Intergenic	.	.	Alu	0.230769
4	118788020	A->G	-	ENSG00000150961	SEC24D	protein_coding	Intergenic	.	.	Alu	0.153846
4	121694564	A->G	-	ENSG00000164111	ANXA5	protein_coding	Intergenic	.	.	Alu	0.105263
4	121695792	A->G	-	ENSG00000164111	ANXA5	protein_coding	Intergenic	.	.	Alu	0.0232558
4	138193614	A->G	-	ENSG00000151012	SLC7A11	protein_coding	Intergenic	.	.	Alu	0.181818
4	139046042	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0227273
4	139046129	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0393258
4	139046593	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.263158
4	139046644	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0410959
4	139046649	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0405405
4	139046650	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0405405
4	139046674	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0425532
4	139046696	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0571429
4	139046699	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.461538
4	139046709	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.264706
4	139046754	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.190476
4	139046776	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.145833
4	139046836	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0531915
4	139047266	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0306122
4	139047315	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0487805
4	139047322	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0338983
4	139047337	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0273973
4	139047340	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0285714
4	139047349	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0606061
4	139047440	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0222222
4	139171837	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139171841	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139171883	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139365576	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.166667
4	143193884	A->G	+	ENSG00000170185	USP38	protein_coding	Intergenic	.	.	Alu	0.181818
4	143194014	A->G	+	ENSG00000170185	USP38	protein_coding	Intergenic	.	.	Alu	0.2
4	143541957	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.111111
4	143541962	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.105263
4	150832379	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.5
4	150832393	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.615385
4	150832413	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.4
4	150832472	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.307692
4	150832474	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.272727
4	150832563	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.272727
4	151105344	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	151105640	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.111111
4	151105767	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
4	151105903	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.105263
4	151105904	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	151105930	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.105263
4	151106095	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	151108186	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.3
4	151108377	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.117647
4	152473132	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.272727
4	152473187	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.416667
4	152474794	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.2
4	152518441	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.444444
4	152518470	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.166667
4	152518474	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.111111
4	152518569	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.166667
4	152518572	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.181818
4	152519117	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.2
4	152519150	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.166667
4	152519176	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.5
4	152519186	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.3
4	152529993	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.0461538
4	153699924	A->G	+	ENSG00000137462	TLR2	protein_coding	Intergenic	.	.	Alu	0.0909091
4	155733600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
4	155733603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
4	159109291	A->G	+	ENSG00000109756	RAPGEF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	165242638	A->G	+	ENSG00000109466	KLHL2	protein_coding	Intergenic	.	.	Alu	0.142857
4	173176874	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.416667
4	184781055	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.291667
4	184781086	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0555556
4	184781169	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.104167
4	184781179	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.351351
4	184781779	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0789474
4	184786822	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.133333
4	184799644	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0740741
4	184799645	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.103448
4	184799682	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.153846
4	184799732	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.1
4	184799733	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.1
4	184799789	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.1875
4	184801017	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.1
4	184801059	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.12
4	184801099	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0769231
4	184801129	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	184822487	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0854701
4	184822494	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.020202
4	184822521	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0211268
4	184822552	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.125
4	184822571	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.135338
4	184822582	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0397351
4	184822595	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0992366
4	184822630	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0246914
4	184822657	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.156028
4	184822733	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.261905
4	184822803	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0689655
4	184822863	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0612245
4	184822864	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0520833
4	184822894	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.173469
4	184822908	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.2625
4	184822932	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0521739
4	184823726	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0555556
4	184823734	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0789474
4	184823775	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0810811
4	184823781	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.217391
4	184823799	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0543478
4	184823826	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0689655
4	184824208	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0675676
4	184824222	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.054878
4	184824270	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0350877
4	184824286	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0490196
4	184824293	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.026087
4	184824369	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	184824394	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0566038
5	109798743	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.230769
5	109798811	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.153846
5	119112241	A->G	+	ENSG00000172869	DMXL1	protein_coding	Intergenic	.	.	Alu	0.272727
5	119379670	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	Intergenic	.	.	Alu	0.2
5	122803937	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.166667
5	122803938	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.333333
5	122803955	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.2
5	122804067	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.3
5	122804465	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.133333
5	122804466	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.333333
5	122804495	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.166667
5	122804499	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.583333
5	122804511	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122804549	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122804569	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.214286
5	122804571	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.6
5	122805387	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.3
5	122805861	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.153846
5	122829419	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.416667
5	131159954	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	131160020	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	131160120	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	131160142	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131161407	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.125
5	131161441	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0606061
5	131161532	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.107143
5	131161533	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.172414
5	131161556	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.125
5	131268713	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131268714	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131276191	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.357143
5	131278198	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.25
5	131284683	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.25
5	131285178	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.117647
5	131287604	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131287657	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.157895
5	131287702	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131288037	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131288058	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131288062	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.466667
5	131288143	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.307692
5	131288144	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131288163	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.357143
5	131288179	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3
5	131288187	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131288636	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0689655
5	131289409	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131289526	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.214286
5	131289558	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.692308
5	131289562	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131289579	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131289893	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.466667
5	131289943	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.230769
5	131289972	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.285714
5	131289976	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.692308
5	131289984	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.214286
5	131290017	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.133333
5	131298133	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131302030	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131318010	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131318963	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131318966	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131319031	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.357143
5	131319041	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.266667
5	131319043	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131319105	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131321395	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131340858	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0909091
5	131353105	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.130435
5	131353107	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.272727
5	131353108	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.363636
5	131353123	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.173913
5	131353376	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.210526
5	131353381	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.173913
5	131353423	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.318182
5	131353448	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131353491	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.235294
5	131353651	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131353678	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131353715	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.529412
5	131353756	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.117647
5	131353762	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1875
5	131354093	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131354119	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.4
5	131354221	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131363481	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0869565
5	131387472	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131682551	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.125
5	131682608	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.2
5	131685145	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.25
5	131687299	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.2
5	131687392	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.272727
5	131793314	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.3
5	132473613	A->G	-	ENSG00000197536	C5orf56	processed_transcript	Intergenic	.	.	Alu	1
5	132881938	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132900409	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.214286
5	132900435	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132902150	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132912094	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132912108	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.272727
5	132912109	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.272727
5	132913582	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.1
5	132913620	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.217391
5	132913621	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.272727
5	132913622	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.136364
5	132913701	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0952381
5	132914010	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0714286
5	132914024	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.121212
5	132914025	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0882353
5	132914106	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.214286
5	132914119	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.111111
5	132914120	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.157895
5	132914128	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.157895
5	132914144	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0869565
5	132914145	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0869565
5	132916007	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132916011	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	132916114	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132916116	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.133333
5	132916126	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.214286
5	132916129	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.230769
5	132916187	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132916190	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132919631	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132941439	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132941529	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132941763	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132942900	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
5	132960960	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132961010	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132961017	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.45
5	132961076	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.266667
5	132961273	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.357143
5	132961278	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.307692
5	132961282	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132961420	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.222222
5	132961421	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.1
5	132961444	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.157895
5	132961449	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	134162199	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	134162216	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.2
5	134163678	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.230769
5	134163708	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.2
5	134163733	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	134207322	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.333333
5	134207323	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.166667
5	134207328	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.272727
5	134377981	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	134378040	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134378389	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.153846
5	134379964	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.266667
5	134381173	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.3
5	134381500	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.238095
5	134381758	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.153846
5	134388023	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134388038	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134393527	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
5	137980097	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	138362169	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.0689655
5	138362206	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.0666667
5	138362266	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.0487805
5	138362267	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.047619
5	138373229	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.2
5	138373279	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.214286
5	138517972	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138517985	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.333333
5	138518126	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.133333
5	138518379	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.25
5	138518388	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.157895
5	138518390	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.111111
5	138518393	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.333333
5	138518404	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.153846
5	138518468	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.111111
5	138522894	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138533050	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.166667
5	138533077	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.307692
5	138533078	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.166667
5	138533610	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.125
5	138533623	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.117647
5	138535196	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.142857
5	138570138	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.133333
5	138570144	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.642857
5	138570146	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.2
5	138570282	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.222222
5	138573293	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.142857
5	138573317	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.105263
5	138573394	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.133333
5	138573404	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.333333
5	138573417	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.2
5	138573484	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.25
5	138573564	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.166667
5	138573565	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.166667
5	139277096	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.833333
5	139278134	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.25
5	139295917	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.12
5	139295924	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0769231
5	139295927	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.304348
5	139302201	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.25
5	139303188	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.117647
5	139303231	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.142857
5	139303263	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139303267	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.4
5	139323644	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139323773	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.357143
5	139323826	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.117647
5	139323836	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.266667
5	139323840	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.307692
5	139324363	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.375
5	139324367	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.117647
5	139324368	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.235294
5	139324394	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.1
5	139324448	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.2
5	139324456	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139334859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	139564254	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.272727
5	139566096	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.466667
5	139566158	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139566293	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.4
5	140339521	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.12
5	140339530	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.1875
5	140339557	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.0952381
5	140339593	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.115385
5	140339621	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.35
5	140339626	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.368421
5	140339673	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.294118
5	140340425	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.153846
5	140340531	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.1
5	140468149	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	140609924	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
5	141605617	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.454545
5	141610813	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.2
5	141611437	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.3
5	142791172	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.166667
5	142791178	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.117647
5	142806193	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.176471
5	142951334	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.25
5	142972067	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	Intergenic	.	.	Alu	0.2
5	146497234	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.181818
5	149500694	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.1
5	149532056	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.181818
5	149534432	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.2
5	149540850	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.133333
5	149543830	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.2
5	149547944	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.207207
5	149547947	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0420168
5	149547967	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	149547968	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0701754
5	149547985	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.205882
5	149548008	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0545455
5	149548035	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149548044	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0555556
5	149548050	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0555556
5	149548064	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.114286
5	149548090	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.21875
5	149548095	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0625
5	149548098	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.193548
5	149548113	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.133333
5	149548121	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.1
5	149548122	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0689655
5	149548138	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.414634
5	149548143	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.1
5	149548166	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.146341
5	149548322	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.168067
5	149548323	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.075
5	149548332	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.191667
5	149548341	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0661157
5	149548350	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.104167
5	149548399	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.034188
5	149548401	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.295652
5	149548404	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	149548467	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.05
5	149548480	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0406504
5	149548484	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0247934
5	149548491	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.162162
5	149548536	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	149548564	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	149548598	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	149548604	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0416667
5	149548617	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149548644	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.166667
5	149548681	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.121212
5	149548725	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0243902
5	149548727	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.469136
5	149548737	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.144578
5	149548749	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.121951
5	149548762	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.170732
5	149548766	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.227723
5	149548787	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0330579
5	149548792	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.118644
5	149548802	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0408163
5	149548853	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0898876
5	149548854	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.148936
5	150047162	A->G	+	ENSG00000113716	HMGXB3	protein_coding	Intergenic	.	.	Alu	0.166667
5	150361008	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.166667
5	150366036	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.105263
5	150366039	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.157895
5	150366065	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.157895
5	150366239	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.153846
5	150370801	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.2
5	150397059	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.117647
5	150397073	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.176471
5	150397075	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.1875
5	150397076	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.625
5	150397096	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.214286
5	150398012	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.142857
5	150398020	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.428571
5	150398033	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.176471
5	150398037	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.294118
5	150398055	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.205882
5	150398087	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.172414
5	150398105	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.5
5	150398121	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.44
5	150398123	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.08
5	150398155	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.137931
5	150754792	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.125
5	151043590	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.269231
5	151043592	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.178571
5	151043653	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	151043656	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	151043663	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.28125
5	151043737	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	151043744	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.285714
5	151044174	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.1
5	151044197	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	151044237	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	151044241	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.222222
5	151044243	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.111111
5	151053248	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	151053285	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	151053286	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	151054463	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	151054464	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	151057551	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.125
5	151057554	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.125
5	151057568	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.125
5	151058193	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	151058216	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.1875
5	151073005	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.0967742
5	151073030	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.130435
5	151077116	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.410256
5	151203410	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.3
5	151204059	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.4
5	151204060	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.7
5	151271825	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
5	151271865	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
5	151271873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
5	151271888	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
5	151271913	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
5	154760217	A->G	+	ENSG00000155506	LARP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	154866266	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.6
5	154866895	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.2
5	157081559	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
5	157082186	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
5	157088033	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.125
5	157101886	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.416667
5	157101890	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.181818
5	157102269	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.2
5	157102293	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.133333
5	157185332	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.2
5	157848874	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.153846
5	159172445	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.166667
5	159186936	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.25
5	159187150	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.272727
5	159187160	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.2
5	159187213	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.181818
5	159187424	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.166667
5	159187456	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.133333
5	159187484	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.176471
5	159190180	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.105263
5	159190186	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.133333
5	159190190	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.294118
5	159190260	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.590909
5	159190266	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.173913
5	159190306	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.0952381
5	159190468	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.333333
5	159190579	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.866667
5	160469341	A->G	+	ENSG00000253522	MIR3142HG	lincRNA	Intergenic	.	.	Alu	0.0952381
5	169658789	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.153846
5	169708707	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.133333
5	169708861	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.115385
5	169709423	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.153846
5	169709486	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.133333
5	169709515	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.368421
5	169709642	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.166667
5	169805178	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.133333
5	169812233	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.266667
5	169853216	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.333333
5	169853225	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.384615
5	169929498	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.166667
5	170264675	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.372093
5	170264677	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.341463
5	170264712	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.147059
5	170264739	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.0714286
5	170264777	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.0769231
5	170264785	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.222222
5	170265148	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.0606061
5	170265151	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.151515
5	170280825	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.4
5	171399379	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.272727
5	172108350	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.181818
5	172108381	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.25
5	172108450	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.363636
5	172108453	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.181818
5	172108492	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.181818
5	172108516	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.4
5	172108922	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.5
5	172108949	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.181818
5	172116111	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.285714
5	172116173	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.25
5	172117061	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.142857
5	172153030	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.25
5	172182889	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	172182962	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	172185305	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.153846
5	172185448	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.153846
5	172186179	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.0909091
5	172186191	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.105263
5	172186506	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.09375
5	172186539	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.0869565
5	172808000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
5	172839484	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.2
5	172842121	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.333333
5	173894123	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.153846
5	173912819	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.272727
5	173913298	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.111111
5	173913301	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.105263
5	176467464	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.2
5	176489586	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.181818
5	176489638	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.181818
5	179999671	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.3
5	179999679	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.133333
5	180010515	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.416667
5	180010563	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.363636
5	180010564	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.181818
5	180033199	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.384615
5	180033590	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.166667
5	180033639	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.4
6	106523832	A->G	+	ENSG00000112297	CRYBG1	protein_coding	Intergenic	.	.	Alu	0.142857
6	108584780	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.636364
6	108600099	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.428571
6	108665551	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.3
6	110880049	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.230769
6	110880056	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.214286
6	110886445	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.2
6	110886448	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.2
6	110896704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
6	110896723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
6	110896740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
6	110896777	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
6	110896784	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
6	110896875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	110896918	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
6	110897046	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
6	110897054	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
6	111465183	A->G	-	ENSG00000009413	REV3L	protein_coding	Intergenic	.	.	Alu	0.25
6	111465205	A->G	-	ENSG00000009413	REV3L	protein_coding	Intergenic	.	.	Alu	0.181818
6	116395304	A->G	+	ENSG00000111817	DSE	protein_coding	Intergenic	.	.	Alu	0.2
6	116395345	A->G	+	ENSG00000111817	DSE	protein_coding	Intergenic	.	.	Alu	0.2
6	118554443	A->G	-	ENSG00000198523	PLN	protein_coding	Intergenic	.	.	Alu	0.3
6	122414725	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.181818
6	122414726	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.181818
6	132688922	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.181818
6	132688924	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.272727
6	134399792	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	134444342	A->G	+	ENSG00000231971	AL078590.2	lincRNA	Intergenic	.	.	Alu	0.181818
6	135035270	A->G	-	ENSG00000112339	HBS1L	protein_coding	Intergenic	.	.	Alu	0.0384615
6	136256251	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	136786917	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.25
6	136787108	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.125
6	136787172	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.153846
6	137215788	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.0571429
6	137216839	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.0612245
6	137217967	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.0576923
6	137217989	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.12766
6	138592519	A->G	-	ENSG00000135540	NHSL1	protein_coding	Intergenic	.	.	Alu	0.153846
6	138592575	A->G	-	ENSG00000135540	NHSL1	protein_coding	Intergenic	.	.	Alu	0.0909091
6	139140855	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.117647
6	139141801	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.25
6	139141846	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.166667
6	139141852	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.181818
6	139141853	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.181818
6	139142133	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.272727
6	142935981	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.1
6	142936013	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.1875
6	142936029	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.1
6	142936074	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.388889
6	142936260	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.0769231
6	142936289	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.277778
6	142936304	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.1875
6	142936331	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.181818
6	142936341	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.230769
6	142936361	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.214286
6	144163577	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.117647
6	144163578	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.125
6	144164692	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.181818
6	144164730	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.428571
6	144164749	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.117647
6	144164755	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.277778
6	144164757	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.315789
6	144164758	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.166667
6	144164819	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.136364
6	144164833	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.105263
6	144165438	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.25
6	144175162	A->G	+	ENSG00000135604	STX11	protein_coding	Intergenic	.	.	Alu	0.0869565
6	147211189	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.222222
6	147211622	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.466667
6	147211656	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.111111
6	147211699	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	147211716	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.190476
6	149339324	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.2
6	149592887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
6	149663266	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.2
6	154739066	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.4
6	154739086	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.166667
6	154756827	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.2
6	154778630	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.153846
6	154779107	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.117647
6	154779132	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.117647
6	154779133	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.111111
6	154779172	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.0909091
6	154779194	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.1
6	156980221	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	156980227	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.363636
6	156980228	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.363636
6	156980273	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	157832689	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.115385
6	157846856	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.333333
6	157847006	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.166667
6	157847286	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.133333
6	157847312	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.2
6	157847371	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.0952381
6	157851689	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.3
6	157851690	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.6
6	157851863	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.3
6	157866383	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.411765
6	157916241	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.642857
6	157916308	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.142857
6	158651989	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.2
6	158653449	A->G	-	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.181818
6	158780020	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.2
6	159687267	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0357143
6	159687363	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0465116
6	159687903	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0487805
6	159735240	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0714286
6	159735256	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	159735265	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.172414
6	159735278	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.833333
6	159735280	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.290323
6	159735326	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.121212
6	159735341	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.322581
6	159735413	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.2
6	159735495	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.263158
6	159735496	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.315789
6	159735559	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.311111
6	159735563	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0444444
6	159735573	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.142857
6	159735602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0810811
6	159735618	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.233333
6	159735651	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.136364
6	159742794	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.142857
6	159742798	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0714286
6	159742822	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0571429
6	159743299	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.08
6	159752013	A->G	+	ENSG00000285441	SOD2	protein_coding	Intergenic	.	.	Alu	0.0588235
6	163422494	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.166667
6	163479613	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.0833333
6	163493339	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.117647
6	163493583	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.0714286
6	163509088	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.2
6	166332455	A->G	-	ENSG00000198818	SFT2D1	protein_coding	Intergenic	.	.	Alu	0.2
6	166334511	A->G	-	ENSG00000198818	SFT2D1	protein_coding	Intergenic	.	.	Alu	0.153846
6	169717152	A->G	-	ENSG00000130024	PHF10	protein_coding	Intergenic	.	.	Alu	0.105263
6	170359472	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.4
6	170359479	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.3
6	170359674	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.25
7	100343531	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	1
7	100343661	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	100343662	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.75
7	100343829	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
7	100343850	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	100343943	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	100343967	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
7	100344020	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.384615
7	100344031	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.538462
7	100364014	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.2
7	100364023	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.2
7	104942295	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.056338
7	104942574	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.166667
7	104944761	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0210526
7	104946051	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0232558
7	104946213	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0243902
7	105008652	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.166667
7	105028566	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.272727
7	105029083	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.214286
7	105029184	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.105263
7	105029195	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.105263
7	105042021	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0666667
7	105042056	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.137931
7	105042120	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.12
7	105042226	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.05
7	105043836	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
7	105043907	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105044085	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0714286
7	105048095	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.157895
7	105048115	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.222222
7	105048116	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105048178	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105048226	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.222222
7	105048234	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.176471
7	105048317	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.111111
7	105053896	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105053900	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105067851	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1
7	105068472	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105068473	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105068565	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105071388	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.117647
7	105071466	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105071507	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.230769
7	105072781	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.111111
7	105081263	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.230769
7	105085879	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1875
7	105086515	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.363636
7	105087604	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
7	105087658	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0952381
7	106876951	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.166667
7	106880812	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.25
7	107171292	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.181818
7	107923284	A->G	+	ENSG00000091140	DLD	protein_coding	Intergenic	.	.	Alu	0.6
7	108477769	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.136364
7	108477812	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0952381
7	108478502	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0869565
7	108478528	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0740741
7	108482236	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0487805
7	108482308	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0769231
7	108484498	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.09375
7	108484505	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0689655
7	112105781	A->G	-	ENSG00000128512	DOCK4	protein_coding	Intergenic	.	.	Alu	0.2
7	112105786	A->G	-	ENSG00000128512	DOCK4	protein_coding	Intergenic	.	.	Alu	0.2
7	112112399	A->G	-	ENSG00000128512	DOCK4	protein_coding	Intergenic	.	.	Alu	0.125
7	112138283	A->G	-	ENSG00000128512	DOCK4	protein_coding	Intergenic	.	.	Alu	0.230769
7	112343716	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.133333
7	112343724	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.142857
7	112454928	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.125
7	112454966	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.263158
7	112455012	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.105263
7	112455424	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.166667
7	112455435	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.15
7	116869901	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	116869973	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.0833333
7	116875672	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.130435
7	116875686	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.263158
7	116876129	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.727273
7	116876171	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.166667
7	116907664	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.266667
7	116907670	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.157895
7	116916476	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.105263
7	128631702	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
7	128631768	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
7	128632772	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	128640085	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
7	128640097	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
7	128640124	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
7	129842668	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.166667
7	129842820	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.3
7	129842821	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129842857	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.454545
7	129842864	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129896311	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.3
7	129944499	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	130889398	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.190476
7	130889472	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.0952381
7	130889477	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.647059
7	130889532	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.230769
7	130889683	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.705882
7	130889692	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.117647
7	130889709	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.35
7	130889812	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.0444444
7	130889816	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.0487805
7	130889817	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.0487805
7	130900498	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.133333
7	130932468	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0833333
7	130935109	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0952381
7	130954541	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.15
7	130954669	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0909091
7	130954716	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0689655
7	130957858	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.08
7	130957947	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.166667
7	130966025	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130966355	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	130990270	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.133333
7	130990391	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.307692
7	130993195	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.2
7	131016282	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.105263
7	131017127	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.136364
7	131017209	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.166667
7	131017223	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.133333
7	131032538	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	131041255	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	131041256	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	131041262	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.416667
7	131041849	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.4
7	131044739	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	131057737	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	131057738	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	131061596	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.307692
7	131061631	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.235294
7	131061659	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.105263
7	131061712	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1
7	131061735	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0909091
7	131062356	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.166667
7	131080659	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.421053
7	131081480	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.222222
7	131081551	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.166667
7	131087987	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.09375
7	131091894	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.315789
7	131093526	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.08
7	131093622	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.3
7	131093623	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.315789
7	131093626	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.2
7	131094181	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0487805
7	131378346	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	131378372	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	131378373	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.272727
7	131386070	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	131419516	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.272727
7	131426894	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.25
7	131427962	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.2
7	135478646	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.25
7	135485140	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.416667
7	135485141	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.333333
7	138472939	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.2
7	138494505	A->G	+	ENSG00000122779	TRIM24	protein_coding	Intergenic	.	.	Alu	0.3
7	139073099	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.272727
7	139073133	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.166667
7	139076726	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.142857
7	139083644	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0454545
7	139083651	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0625
7	139381633	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.272727
7	139385421	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139385422	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139393644	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139393656	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.105263
7	139393682	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139395793	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.117647
7	139395853	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.368421
7	139395882	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.631579
7	139395883	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.105263
7	139396384	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.105263
7	139730498	A->G	-	ENSG00000064393	HIPK2	protein_coding	Intergenic	.	.	Alu	0.1
7	139739177	A->G	-	ENSG00000064393	HIPK2	protein_coding	Intergenic	.	.	Alu	0.105263
7	139765035	A->G	-	ENSG00000064393	HIPK2	protein_coding	Intergenic	.	.	Alu	0.0588235
7	139765084	A->G	-	ENSG00000064393	HIPK2	protein_coding	Intergenic	.	.	Alu	0.0588235
7	140154434	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.142857
7	140162275	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.230769
7	140162278	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.230769
7	140769826	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140820822	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.357143
7	140820825	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.375
7	140820851	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.133333
7	140821497	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.133333
7	140871999	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140882882	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140917544	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.214286
7	141684066	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.352941
7	141684127	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.25
7	141684196	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.636364
7	148810784	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.5
7	148828493	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.4
7	148858664	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.4
7	149483347	A->G	-	ENSG00000181220	ZNF746	protein_coding	Intergenic	.	.	Alu	0.272727
7	149483356	A->G	-	ENSG00000181220	ZNF746	protein_coding	Intergenic	.	.	Alu	0.181818
7	151495840	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.3
7	151496810	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.166667
7	151803170	A->G	-	ENSG00000106617	PRKAG2	protein_coding	Intergenic	.	.	Alu	0.5
7	152157276	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152157281	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152157290	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152310482	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.117647
7	152353622	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152353671	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152398965	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152404511	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152405897	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152406351	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.75
7	152406370	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152409026	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.3
7	152409076	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.105263
7	152409137	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.392857
7	152409185	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.222222
7	152409186	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.111111
7	152409226	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.4375
7	152409234	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152409235	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152409279	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152410161	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.111111
7	152413217	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.3
7	152414338	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152414367	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.3
7	152415771	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152415794	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.272727
7	152417279	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152422392	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.3
7	152424246	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152424587	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152425384	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.285714
7	152429568	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152430145	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.230769
7	152430663	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152430670	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152430806	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152430813	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152432890	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152432926	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1875
7	152433026	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.333333
7	152433104	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	156868305	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.3
7	156868587	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.272727
7	157232533	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.0952381
7	157232535	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	157232614	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.153846
7	157232629	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.166667
7	157343085	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.1
7	157344220	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.125
7	157373420	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0540541
7	157374292	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0833333
7	157374481	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0666667
7	158738010	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.103448
7	158738019	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0689655
7	158738022	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.310345
7	158738023	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.172414
7	158738148	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1875
7	158738151	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.5
7	158738157	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.125
7	158738163	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.133333
7	158738164	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1875
7	158738190	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158738226	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.6
7	158738249	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158738265	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.5
7	158738266	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.5
7	158738468	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.103448
7	158738522	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.636364
7	158738540	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.235294
7	158738557	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.684211
7	158738580	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.529412
7	158738619	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.230769
7	158738646	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.636364
7	158738647	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.636364
7	158738725	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158790845	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.3
7	158792406	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158823036	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	158823048	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
7	158823081	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158823082	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.176471
8	100303726	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.166667
8	100304053	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.272727
8	100304095	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.2
8	100304113	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.153846
8	100304117	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.181818
8	100304247	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.333333
8	100713582	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0263158
8	100713719	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0263158
8	100713773	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0641026
8	100714539	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.163934
8	100714551	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.04
8	100714607	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0408163
8	100716159	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.140845
8	100716160	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.084507
8	100716230	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.046875
8	100716236	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	100716239	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0277778
8	100716256	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.025974
8	100716279	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.135593
8	100716314	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.045977
8	100716737	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0210526
8	100717078	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0338983
8	100717113	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.14
8	100717117	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0961538
8	100717149	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0961538
8	100717215	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.205882
8	100717221	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0930233
8	100927368	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0444444
8	100927369	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0454545
8	100927415	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0857143
8	100927424	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0555556
8	100928036	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0540541
8	100928090	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.137931
8	100928098	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.28
8	100928156	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.125
8	100928158	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.153846
8	100928168	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.125
8	100928228	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.1875
8	100929230	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.125
8	100929296	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0769231
8	100929324	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0869565
8	100929337	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.214286
8	100929338	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0714286
8	100929419	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.153846
8	100929431	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.142857
8	100929446	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.153846
8	100929473	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.133333
8	102347419	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.133333
8	102347750	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.133333
8	102347774	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.363636
8	102347778	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.25
8	102347796	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.117647
8	102347846	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.230769
8	102376705	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.285714
8	102390273	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.181818
8	102390337	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.4
8	102393467	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.117647
8	102393560	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.25
8	102399493	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.181818
8	102399495	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.181818
8	102399690	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.25
8	102402209	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.181818
8	102403544	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.5
8	102403768	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102405662	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102407294	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.7
8	102407600	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.5
8	102407614	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102407615	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.4
8	102650678	A->G	-	ENSG00000155090	KLF10	protein_coding	Intergenic	.	.	Alu	0.0681818
8	102830345	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.142857
8	102853374	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.2
8	102979109	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.0714286
8	102979115	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.178571
8	102979116	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.0666667
8	102979119	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.0740741
8	102979120	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.0769231
8	102987627	A->G	+	ENSG00000254281	AP003354.2	lincRNA	Intergenic	.	.	Alu	0.272727
8	103420779	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.5
8	103423371	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.416667
8	104549457	A->G	-	ENSG00000147650	LRP12	protein_coding	Intergenic	.	.	Alu	0.230769
8	108227202	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.153846
8	108227215	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.153846
8	108227216	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.384615
8	109471878	A->G	+	ENSG00000205038	PKHD1L1	protein_coding	Intergenic	.	.	Alu	1
8	115639126	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.1875
8	115639139	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.352941
8	115639348	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.111111
8	115639752	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.25
8	115639815	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.176471
8	119790383	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.181818
8	119793959	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.363636
8	119805590	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.272727
8	119806002	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.125
8	122790788	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.142857
8	122790817	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.105263
8	122792863	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.0967742
8	122801492	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.142857
8	122801567	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.133333
8	122801594	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.2
8	122801597	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.181818
8	122801617	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.153846
8	122801666	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.444444
8	122802128	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.107143
8	122802141	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.0952381
8	122802168	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.105263
8	122802193	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.3
8	122802249	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.2
8	122827119	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.153846
8	122827145	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.2
8	122828034	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.2
8	123230716	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.181818
8	123230727	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.2
8	123231044	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.166667
8	124492516	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	0.025641
8	124691576	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.12
8	124691581	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.08
8	124691583	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.12
8	124691644	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0714286
8	124691695	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	124691709	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	124691711	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	124696259	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.2
8	124696260	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.3
8	124696596	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.123967
8	124696605	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.221311
8	124696609	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0280374
8	124696659	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0379747
8	124696685	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.111111
8	124696688	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0882353
8	124696739	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	124696829	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	124697325	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0810811
8	124697343	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0408163
8	124697363	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.047619
8	124697372	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.111111
8	124697380	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0434783
8	124697397	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.18
8	124697460	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	124697477	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.09375
8	124697515	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.171429
8	124697522	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.111111
8	124697552	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.121951
8	124698716	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0666667
8	124698725	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.0666667
8	125072090	A->G	-	ENSG00000164961	WASHC5	protein_coding	Intergenic	.	.	Alu	0.454545
8	125072111	A->G	-	ENSG00000164961	WASHC5	protein_coding	Intergenic	.	.	Alu	0.181818
8	129848010	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	129882953	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.25
8	129931694	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	129943339	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intergenic	.	.	Alu	0.0909091
8	129943342	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intergenic	.	.	Alu	0.0909091
8	129943352	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intergenic	.	.	Alu	0.0909091
8	129943398	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intergenic	.	.	Alu	0.2
8	129948818	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intergenic	.	.	Alu	0.133333
8	129948819	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intergenic	.	.	Alu	0.133333
8	129950461	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129950487	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129950488	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	129954441	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129954450	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.272727
8	129954512	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	129955019	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1875
8	129955036	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	129955043	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.111111
8	129955109	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	129957122	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	129965629	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.133333
8	129965733	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	129965886	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.107143
8	129965887	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.107143
8	129965912	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.111111
8	129965955	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.777778
8	129965972	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.111111
8	129966036	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0909091
8	129966039	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.15
8	129966082	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.307692
8	129966113	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.411765
8	129966124	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129966127	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129966163	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.263158
8	129966810	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	129976915	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	129977951	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	129978006	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.117647
8	129978020	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	129978115	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.111111
8	129979041	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.307692
8	129979058	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	129979065	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129979809	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129979811	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129981200	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	129990576	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.133333
8	129990706	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.444444
8	129990723	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.529412
8	129990791	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	129990813	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.727273
8	129990874	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.25
8	129990886	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.230769
8	129990914	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.615385
8	129990948	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.230769
8	129991049	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.545455
8	129991050	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129999765	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.230769
8	129999778	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129999799	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0952381
8	129999855	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.133333
8	129999918	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	130002216	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.307692
8	130002841	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0909091
8	130002922	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.136364
8	130002923	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.142857
8	130002930	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.157895
8	130003136	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.136364
8	130005766	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0952381
8	130007992	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0833333
8	130008043	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	130008046	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	130353613	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.130435
8	130353687	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.454545
8	130353706	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.1875
8	130353746	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	130353748	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	130353776	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.130435
8	130353788	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	130353795	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.47619
8	130353814	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.172414
8	130353819	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.2
8	130353949	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.285714
8	130353998	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.214286
8	130354025	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.190476
8	130354070	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	130354080	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	130354091	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.24
8	130354119	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.444444
8	130354964	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.111111
8	130355024	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	131909424	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.166667
8	131909452	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.166667
8	131909466	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.230769
8	131910352	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.272727
8	133277346	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.133333
8	133487137	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	133492555	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	133493601	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.230769
8	133493602	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	133513661	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.25
8	133530555	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.08
8	133561980	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.137931
8	133562039	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.28
8	133562074	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.533333
8	133562076	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.266667
8	133562321	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	134827085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
8	134827114	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
8	134827144	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	134827168	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
8	134827287	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	134827551	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
8	134827705	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
8	140554948	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.153846
8	140596115	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.0588235
8	140596338	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.0714286
8	140596339	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.0740741
8	140605273	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	140609884	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.133333
8	140610153	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.461538
8	140613010	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	140617348	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.142857
8	140617349	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.230769
8	140617350	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.307692
8	140617376	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.181818
8	140617994	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.4
8	140620808	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	140620809	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	141168615	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.133333
8	141185661	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.25
9	100023501	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.166667
9	100023561	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.272727
9	100023650	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.2
9	100023938	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.16
9	100023951	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.105263
9	100023952	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.636364
9	100023972	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.0952381
9	100023989	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.111111
9	100023992	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.1
9	100024027	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.176471
9	100024031	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.117647
9	100024033	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.5
9	100024043	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.6
9	100024047	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.133333
9	100024078	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.214286
9	100025000	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.1
9	104857042	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.1
9	104857176	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.35
9	104857182	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.176471
9	104857220	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.307692
9	104857370	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.210526
9	104857377	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.25
9	104857402	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0625
9	104857411	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0666667
9	104857414	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.111111
9	104861031	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.352941
9	104865394	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104887156	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.2
9	104887231	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.15
9	104887864	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.272727
9	104887871	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	104887887	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104890579	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104898383	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0909091
9	104898385	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0555556
9	104898404	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0606061
9	104898464	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0555556
9	104898500	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.08
9	104908410	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0392157
9	104910765	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.217391
9	104910802	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	104910807	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104912312	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0322581
9	104912316	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0681818
9	104912317	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0681818
9	104912355	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0769231
9	104912363	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0588235
9	104913928	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.45
9	104913980	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.153846
9	104913994	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104914033	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	104914066	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.125
9	104914071	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.705882
9	104914219	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0731707
9	104914221	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.15
9	104914228	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0540541
9	104914233	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.125
9	104914288	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	104914294	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.433333
9	104914314	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.08
9	104914330	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0377358
9	104914334	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0377358
9	104914361	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0338983
9	104914366	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0491803
9	104914378	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0689655
9	104914453	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0576923
9	104914456	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.313725
9	104914461	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0416667
9	104914466	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0434783
9	104916762	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0645161
9	104916777	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0909091
9	104919390	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0298507
9	104919511	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.16129
9	104919512	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.1
9	104919526	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0980392
9	104919529	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0434783
9	104919536	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.244898
9	104920595	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0512821
9	104920597	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.515152
9	104920621	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.103448
9	104920649	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.142857
9	104920650	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0512821
9	104920691	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.225806
9	104920694	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	104920785	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.190476
9	104922808	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0909091
9	104922809	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0444444
9	104922817	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0392157
9	104922826	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0731707
9	104922890	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0454545
9	104922896	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.047619
9	104922935	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0487805
9	104922966	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0769231
9	104924569	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.05
9	104925229	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0588235
9	104925294	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0571429
9	105706902	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.181818
9	105706903	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.181818
9	111450906	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.125
9	112038616	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
9	112038653	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
9	112039215	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
9	112039414	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
9	112040209	A->G	-	.	.	.	Intergenic	.	.	Alu	0.269231
9	112040223	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
9	112040246	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
9	112040260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
9	112040263	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
9	112040302	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
9	112040304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
9	112040343	A->G	-	.	.	.	Intergenic	.	.	Alu	0.692308
9	112040344	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	112328707	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.181818
9	113170147	A->G	+	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.166667
9	113170342	A->G	+	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.181818
9	113170395	A->G	+	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.117647
9	113171172	A->G	+	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.181818
9	113171173	A->G	+	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.166667
9	114384353	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.111111
9	115009557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.470588
9	122902704	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.4
9	124396319	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.416667
9	126809939	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.2
9	126810046	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.1875
9	126810368	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.181818
9	126810768	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.153846
9	126810965	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.181818
9	126821996	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.2
9	126822485	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.2
9	126822487	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.2
9	127791374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.275862
9	127791408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	129843405	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.2
9	129954752	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0425532
9	129954753	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0434783
9	129954771	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0638298
9	129954829	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.09375
9	129954840	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0681818
9	129954850	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0434783
9	129954854	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.047619
9	129954894	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.183673
9	129954912	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.04
9	129954931	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0833333
9	129954981	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.115385
9	129954988	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0689655
9	129955306	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129955398	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.28
9	129955402	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	129955437	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0666667
9	129955487	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0909091
9	129955492	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0833333
9	129955508	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.210526
9	129955511	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.277778
9	129955517	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129955719	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	131400419	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.117647
9	131424010	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131439937	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131439975	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.130435
9	131441458	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.214286
9	131441463	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.133333
9	131623032	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.2
9	131655859	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.133333
9	131687389	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.272727
9	131688725	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.25
9	131688733	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.181818
9	131688736	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.3
9	131689737	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	131690684	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.117647
9	131690748	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.117647
9	131708809	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.4
9	131708823	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.263158
9	131708828	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.266667
9	131708829	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.8
9	131708893	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.125
9	131708900	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.266667
9	131708901	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.466667
9	131708902	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.3125
9	131708926	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.125
9	131708959	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.263158
9	131709123	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.2
9	131709167	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.545455
9	131709231	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.363636
9	131709343	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.4
9	131709344	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
9	131710697	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.416667
9	131710813	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.125
9	131713789	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.25
9	131714805	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.181818
9	131714832	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.583333
9	131714948	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.133333
9	131714986	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.333333
9	131715782	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.181818
9	131716734	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.133333
9	131717649	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.2
9	131717673	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.111111
9	131720007	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.230769
9	131726544	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.117647
9	131726904	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
9	131737865	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.176471
10	100208723	A->G	-	ENSG00000213341	CHUK	protein_coding	Intergenic	.	.	Alu	0.7
10	100208724	A->G	-	ENSG00000213341	CHUK	protein_coding	Intergenic	.	.	Alu	0.7
10	101810918	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.1875
10	101810923	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.333333
10	101810928	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.117647
10	101810942	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.176471
10	101810963	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.142857
10	101811264	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.357143
10	101811277	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.133333
10	101811670	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.666667
10	102816692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
10	102816819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
10	103161640	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103164067	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103169495	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103172713	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103172735	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103172742	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103172828	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103172908	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103177673	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103177686	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.272727
10	104261077	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.166667
10	104261094	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.136364
10	104261114	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.2
10	104331068	A->G	-	ENSG00000148841	ITPRIP	protein_coding	Intergenic	.	.	Alu	0.1875
10	104331089	A->G	-	ENSG00000148841	ITPRIP	protein_coding	Intergenic	.	.	Alu	0.235294
10	110038904	A->G	+	ENSG00000148700	ADD3	protein_coding	Intergenic	.	.	Alu	0.714286
10	110518093	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
10	110925494	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.15
10	110925557	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.304348
10	110925558	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.521739
10	110925570	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.1875
10	110925622	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.285714
10	110925623	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.190476
10	110925691	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.111111
10	110925693	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.222222
10	112968708	A->G	+	ENSG00000148737	TCF7L2	protein_coding	Intergenic	.	.	Alu	0.125
10	112968786	A->G	+	ENSG00000148737	TCF7L2	protein_coding	Intergenic	.	.	Alu	0.461538
10	112978514	A->G	+	ENSG00000148737	TCF7L2	protein_coding	Intergenic	.	.	Alu	0.1875
10	117332671	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.4
10	119071861	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.5
10	119071925	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119071949	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.1875
10	119072521	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.4375
10	119072525	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.375
10	119072545	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.266667
10	119523408	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.2
10	119591153	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.2
10	124094037	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
10	124662619	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.2
10	124662700	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.272727
10	124662702	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.166667
10	124922419	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.2
10	124922460	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.166667
10	124923212	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.583333
10	124923215	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.153846
10	124923219	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.214286
10	124946024	A->G	+	ENSG00000226899	AL731577.1	antisense	Intergenic	.	.	Alu	0.6
10	124962368	A->G	+	ENSG00000019995	ZRANB1	protein_coding	Intergenic	.	.	Alu	0.230769
10	128051992	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0789474
10	128053088	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0434783
10	128053104	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.05
10	128053108	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0789474
10	128053144	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.097561
10	128053166	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.108696
10	128053171	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0540541
10	128053226	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0816327
10	128053854	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.16
10	128054574	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.339623
10	128054657	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.357143
10	128054658	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.209302
10	131913116	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0238095
10	132569105	A->G	+	ENSG00000068383	INPP5A	protein_coding	Intergenic	.	.	Alu	0.181818
10	133265597	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.4
10	133294764	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.133333
10	133297239	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.272727
10	133297298	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.272727
10	133300569	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.2
10	133410775	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.272727
11	102434229	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.230769
11	102435536	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.1875
11	102438087	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.166667
11	116922047	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.636364
11	116922048	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	116922258	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	116924252	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	116925157	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	116925159	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	116926803	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0555556
11	116926855	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	116926945	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	116980776	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.6
11	116998053	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117019864	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117023930	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117025528	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117025543	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117028985	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117029046	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.4
11	117029135	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.5
11	117029262	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.363636
11	117029268	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.4
11	117051673	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117051702	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.285714
11	117051711	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117051979	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117052018	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	117052056	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117052097	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.16
11	117053744	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117063794	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117074719	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117074751	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117074858	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117074864	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	117076908	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117077152	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	117085291	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	117085394	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117085734	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.533333
11	117085764	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.315789
11	117085768	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	117085802	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117085828	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.190476
11	117085863	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117085873	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.409091
11	117088115	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117088737	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.35
11	117088809	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	117089295	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117166104	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.142857
11	117166105	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.142857
11	118753400	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.181818
11	118753418	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.363636
11	118753478	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.181818
11	118760405	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.307692
11	118760427	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.133333
11	118765988	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0769231
11	118765989	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.153846
11	118766352	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.133333
11	118766825	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.166667
11	118868857	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	122657461	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	122657966	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.107143
11	122657969	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0714286
11	122670892	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0769231
11	122670897	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0714286
11	122670902	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0769231
11	122670918	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	122670943	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.263158
11	122670946	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.214286
11	122670963	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.176471
11	122670972	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0952381
11	122671010	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122671025	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.15
11	122671297	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0952381
11	122671324	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.571429
11	122671335	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.64
11	122671342	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.214286
11	122671347	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0666667
11	122672347	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.117647
11	122672381	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0769231
11	122672394	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.136364
11	122672420	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.315789
11	122672455	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.16
11	122672465	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.241379
11	122672467	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.115385
11	122672483	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122672526	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.529412
11	122672586	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.111111
11	122672587	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.185185
11	122672588	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.103448
11	122672600	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.133333
11	122673385	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122673579	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	122673591	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	122676433	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122677803	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.818182
11	122677889	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122677901	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122677956	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122677971	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0909091
11	122677974	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0869565
11	122678000	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0869565
11	122678011	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122678012	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.105263
11	122678013	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.111111
11	122684832	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.117647
11	122688325	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.214286
11	122694453	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122694457	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122697519	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.3
11	122706216	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122706220	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122709082	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122709140	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.357143
11	122709162	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.272727
11	122717986	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	122730072	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.3
11	122733986	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.230769
11	122738705	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122738767	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.384615
11	122753566	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122753596	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	128706450	A->G	+	ENSG00000151702	FLI1	protein_coding	Intergenic	.	.	Alu	0.533333
11	130072531	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.181818
11	130072606	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.2
11	130074277	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.08
11	130872036	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
12	100070749	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.181818
12	100070775	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.4
12	100070776	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.5
12	100094197	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.142857
12	100094386	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.133333
12	100099816	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.166667
12	100626889	A->G	+	ENSG00000139354	GAS2L3	protein_coding	Intergenic	.	.	Alu	0.0606061
12	100626890	A->G	+	ENSG00000139354	GAS2L3	protein_coding	Intergenic	.	.	Alu	0.0588235
12	100626903	A->G	+	ENSG00000139354	GAS2L3	protein_coding	Intergenic	.	.	Alu	0.0740741
12	100626966	A->G	+	ENSG00000139354	GAS2L3	protein_coding	Intergenic	.	.	Alu	0.181818
12	100627436	A->G	+	ENSG00000139354	GAS2L3	protein_coding	Intergenic	.	.	Alu	0.133333
12	101794397	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.25
12	101804021	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.3
12	101827719	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.133333
12	101827720	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.266667
12	101827748	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.125
12	101827818	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
12	101827891	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.3
12	101901624	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.0512821
12	101901696	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.047619
12	101901772	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.03125
12	101901776	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.0447761
12	101901807	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.0327869
12	104464132	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0606061
12	104464168	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0714286
12	104464171	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0487805
12	104464303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0769231
12	104492272	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0588235
12	104492283	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0588235
12	104492303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.242424
12	104492770	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.130435
12	104492779	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.190476
12	104492822	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104492836	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0714286
12	104492846	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104492867	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0769231
12	104492886	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0909091
12	104492912	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.15
12	104492913	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.666667
12	104492922	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104492926	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.130435
12	104492939	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104492953	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.333333
12	104492954	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104493885	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0681818
12	104493923	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.148148
12	104493924	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0545455
12	104493936	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.245283
12	104493949	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0350877
12	104494010	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0454545
12	104494017	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0444444
12	104539857	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0689655
12	104539948	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0555556
12	104545877	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0869565
12	104575936	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.333333
12	104575939	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.545455
12	104615672	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0833333
12	104615713	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0769231
12	104615743	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.190476
12	104615831	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.117647
12	104615916	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104616546	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.157895
12	104616566	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.157895
12	104616595	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0909091
12	104616631	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104616668	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.190476
12	104616675	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0869565
12	104616707	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104616724	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104616726	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.08
12	104616738	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0689655
12	104616744	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0666667
12	104642425	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.266667
12	104642583	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104642600	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0909091
12	104642668	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.153846
12	104643303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.12
12	104681972	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.5
12	104956571	A->G	-	ENSG00000136052	SLC41A2	protein_coding	Intergenic	.	.	Alu	0.2
12	106347997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03125
12	108688779	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.111111
12	110001667	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.3
12	110323561	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.4
12	110323631	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.454545
12	110323632	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.2
12	110323676	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.133333
12	110324491	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.181818
12	110324502	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.2
12	110324886	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.166667
12	110439670	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.2
12	110442127	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.416667
12	110442496	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.181818
12	110447530	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.166667
12	111431630	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	111431656	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.1
12	111433187	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.2
12	111433191	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.2
12	111433224	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.2
12	111433257	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.2
12	111433272	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.125
12	111433696	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.105263
12	111433816	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	111442001	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.181818
12	115995601	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.117647
12	115999309	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.3
12	116001400	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.5
12	116061818	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.272727
12	116061844	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.25
12	116076393	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.3
12	116076455	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	116076496	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116076530	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.230769
12	116076531	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116078061	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116084702	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116090928	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0909091
12	116097214	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116118081	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.384615
12	116134926	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	116134935	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116154923	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.4
12	116154924	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.15
12	116154925	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.428571
12	116154938	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.391304
12	116154942	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0869565
12	116155003	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.241379
12	116155004	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.37931
12	116155005	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	116155006	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.266667
12	116155009	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.878788
12	116155053	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.259259
12	116155073	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.263158
12	116155203	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0555556
12	116155323	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.28
12	116155328	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.1875
12	116155340	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.268293
12	116155341	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.175
12	116155390	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.194444
12	116170703	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0833333
12	116177994	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.1
12	116177996	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.15
12	116190907	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.1875
12	116191602	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116193016	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.1875
12	116193046	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.1875
12	116193065	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.105263
12	116194303	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116195572	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0909091
12	116195603	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.105263
12	116206274	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0740741
12	116207273	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116208935	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116218898	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116221118	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0952381
12	116221211	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.1875
12	116221243	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.1
12	116221322	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.111111
12	116221333	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.461538
12	116233040	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0869565
12	118366164	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.272727
12	120169708	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.3
12	120169730	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.166667
12	120569992	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.111111
12	120569993	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.111111
12	121025519	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121030121	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.333333
12	121030134	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.461538
12	121030950	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.285714
12	121030961	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.166667
12	121031003	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121031043	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121031108	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121210621	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0983607
12	121210622	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0491803
12	121210628	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.047619
12	121210668	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0555556
12	121210705	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0701754
12	121211303	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.075
12	121211306	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.153846
12	121211345	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.047619
12	121211368	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0408163
12	121211369	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0392157
12	121211423	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.130435
12	121211441	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.131579
12	121211452	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0731707
12	121211700	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.105263
12	121211738	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.153846
12	121212316	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.166667
12	121212340	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.25
12	121223151	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.2
12	121223786	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.2
12	121223792	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.125
12	121223801	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.166667
12	121225540	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.3
12	121225618	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.692308
12	121225951	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.384615
12	121226006	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.105263
12	121226016	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.590909
12	121226043	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.0909091
12	121226056	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.111111
12	121226107	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.136364
12	121226134	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.277778
12	121226286	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.4
12	121226344	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.3
12	122223970	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.2
12	122223999	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.153846
12	122368680	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.2
12	122368782	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.153846
12	122368783	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.384615
12	122368809	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.25
12	122368830	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.272727
12	122369156	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.4
12	122510073	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.2
12	122512079	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.125
12	122512574	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.5
12	122513932	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.114286
12	122513990	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0645161
12	122514024	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.454545
12	122514337	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.214286
12	122514338	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.533333
12	122514361	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.5
12	122514362	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.454545
12	122514403	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.166667
12	122514447	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0606061
12	122890429	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.2
12	123323511	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.166667
12	123323529	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.166667
12	123391469	A->G	+	ENSG00000183955	KMT5A	protein_coding	Intergenic	.	.	Alu	0.181818
12	123432380	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.133333
12	123432410	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	123432492	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.142857
12	123434184	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	123435630	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.2
12	123435708	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	123435720	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	130802502	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.3
12	130803349	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.25
12	130803555	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.9
12	131728933	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	131728963	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.416667
12	131780619	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	131781499	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.272727
13	102630470	A->G	+	ENSG00000134900	TPP2	protein_coding	Intergenic	.	.	Alu	0.333333
13	109773601	A->G	-	ENSG00000185950	IRS2	protein_coding	Intergenic	.	.	Alu	1
13	110895504	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.266667
13	114088048	A->G	-	ENSG00000185989	RASA3	protein_coding	Intergenic	.	.	Alu	0.2
13	114088081	A->G	-	ENSG00000185989	RASA3	protein_coding	Intergenic	.	.	Alu	0.4
14	100363513	A->G	-	ENSG00000140105	WARS	protein_coding	Intergenic	.	.	Alu	0.466667
14	100363581	A->G	-	ENSG00000140105	WARS	protein_coding	Intergenic	.	.	Alu	0.75
14	101817138	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.142857
14	101817199	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.1875
14	101996654	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.363636
14	102018883	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102021193	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.142857
14	102021195	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.142857
14	102046878	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.125
14	102046899	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.166667
14	102047009	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.117647
14	102346781	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.636364
14	102596333	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102599897	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102599903	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102599904	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102610632	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102618349	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102618350	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.214286
14	102618421	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102640880	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102651854	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102658172	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102660585	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102661273	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.214286
14	102661276	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
14	102661944	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102725642	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
14	102726074	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.133333
14	102726104	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.166667
14	102726117	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
14	102726151	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102781756	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102786840	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	102786843	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.3
14	102786887	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.166667
14	102787952	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102794228	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.111111
14	102794236	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.111111
14	102794244	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.125
14	102797838	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.266667
14	102797842	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.25
14	102798519	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.636364
14	102798533	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.166667
14	102799590	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.142857
14	102799616	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.1875
14	102799617	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.117647
14	102801609	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.153846
14	102801661	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.25
14	102804032	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.117647
14	102804587	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	102813040	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.3
14	102813069	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.5
14	102813080	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.3
14	102874386	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102884733	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.230769
14	103431225	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.7
14	103431350	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.214286
14	105048950	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
14	105864670	A->G	-	.	.	.	Intergenic	.	.	Alu	0.689655
15	101229689	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	101229719	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.315789
15	101229741	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.105263
15	101229783	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.125
15	101229785	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.142857
15	101229824	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.153846
15	101230119	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.238095
15	101230120	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	101230121	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.157895
15	101230160	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.166667
MT	1438	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
MT	15965	A->G	+	ENSG00000210196	MT-TP	Mt_tRNA	Intron	.	.	Alu	1
X	2715566	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	0.642857
X	304577	A->G	-	ENSG00000178605	GTPBP6	protein_coding	Intron	.	.	Alu	0.25
X	71292298	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.153846
X	73947033	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0444444
X	74247395	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.166667
X	74280130	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.357143
Y	12688801	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.117647
Y	12688823	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.0952381
Y	12688852	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.0952381
Y	12688853	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.142857
1	504996	A->G	-	ENSG00000237094	AL732372.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
4	780350	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.153846
5	461632	A->G	+	ENSG00000180104	EXOC3	protein_coding	Intron	.	.	Alu	0.2
19	221166	A->G	-	ENSG00000282508	LINC01002	processed_transcript	Intron	.	.	Alu	0.769231
1	8907733	A->G	-	ENSG00000232208	AL139415.1	processed_pseudogene	Intron	.	.	Alu	1
1	9949703	A->G	+	ENSG00000228150	AL357140.2	sense_intronic	Intron	.	.	Alu	0.181818
3	9701415	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intron	.	.	Alu	0.166667
3	9701430	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intron	.	.	Alu	0.166667
5	1629590	A->G	-	ENSG00000188002	AC026412.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.105263
11	9245374	A->G	-	ENSG00000255097	AP006259.1	sense_intronic	Intron	.	.	Alu	0.2
12	6586971	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intron	.	.	Alu	0.272727
12	6944199	A->G	+	ENSG00000111678	C12orf57	protein_coding	Intron	.	.	Alu	1
12	6953228	A->G	+	ENSG00000111679	PTPN6	protein_coding	Intron	.	.	Alu	1
12	7923267	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.08
12	7929567	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.157895
12	9648777	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intron	.	.	Alu	1
12	9659666	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.111111
12	9659679	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.555556
17	1585279	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intron	.	.	Alu	0.153846
17	1585683	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intron	.	.	Alu	0.214286
17	4787575	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0555556
17	4787583	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.125
17	4787710	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.08
17	4787714	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.04
17	4787719	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.142857
17	4787733	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0666667
17	4787738	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0416667
17	4787787	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0625
17	4787795	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.2
17	4787796	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.266667
17	4787804	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.344828
17	4787814	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.153846
17	4787818	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.107143
17	4788283	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.025974
17	4788284	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0512821
17	4788290	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0461538
17	4788292	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.177419
17	4788304	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.151515
17	4788305	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.164179
17	4788362	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0289855
17	4788375	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.216216
17	4788381	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0526316
17	4788398	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0365854
17	4788399	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0379747
17	4788436	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.05
17	4788437	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.168675
17	4788438	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.228916
17	4788442	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0632911
18	9115711	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.181818
18	9115764	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.133333
1	22059644	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intron	.	.	Alu	0.15
1	23975231	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intron	.	.	Alu	1
1	29172430	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0869565
1	45658766	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.3
1	46593744	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.375
1	46593780	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.4
1	46593793	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.117647
1	46593809	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.166667
1	46593818	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.111111
1	46593850	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.173913
1	51458654	A->G	-	ENSG00000085832	EPS15	protein_coding	Intron	.	.	Alu	0.142857
1	51458680	A->G	-	ENSG00000085832	EPS15	protein_coding	Intron	.	.	Alu	0.133333
2	47811060	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intron	.	.	Alu	0.578947
2	86527165	A->G	-	ENSG00000115561	CHMP3	protein_coding	Intron	.	.	Alu	0.0322581
2	86527166	A->G	-	ENSG00000115561	CHMP3	protein_coding	Intron	.	.	Alu	0.0461538
2	86614540	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.2
3	12589893	A->G	-	ENSG00000132155	RAF1	protein_coding	Intron	.	.	Alu	0.166667
3	25734154	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intron	.	.	Alu	0.454545
3	37173003	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intron	.	.	Alu	0.0325203
3	48699392	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intron	.	.	Alu	0.153846
3	48699398	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intron	.	.	Alu	0.2
3	49293563	A->G	-	ENSG00000114316	USP4	protein_coding	Intron	.	.	Alu	0.2
3	50112949	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.105263
3	50112955	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0952381
3	50112985	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.117647
3	50113054	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0952381
3	50113122	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.15
4	39908834	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intron	.	.	Alu	0.181818
4	40209558	A->G	+	ENSG00000168421	RHOH	protein_coding	Intron	.	.	Alu	0.0666667
4	55416129	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.08
4	82877517	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intron	.	.	Alu	0.333333
4	98026084	A->G	+	ENSG00000242697	RPL5P12	processed_pseudogene	Intron	.	.	Alu	1
5	37051065	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intron	.	.	Alu	0.3
6	24706768	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intron	.	.	Alu	0.181818
6	24706903	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intron	.	.	Alu	0.3125
6	29889346	A->G	+	ENSG00000206341	HLA-H	unprocessed_pseudogene	Intron	.	.	Alu	1
6	29943115	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intron	.	.	Alu	1
6	38062452	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intron	.	.	Alu	0.2
6	38062483	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intron	.	.	Alu	0.636364
6	42941524	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0606061
6	42941586	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.117647
6	42943924	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.642857
6	42943928	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.166667
6	42947683	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.272727
6	42947695	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.4
7	32916937	A->G	-	ENSG00000205763	RP9P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.125
7	48106410	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.2
7	48106411	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.142857
7	48106428	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.153846
7	48106494	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.133333
7	48106573	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.0769231
7	48106586	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.0645161
7	66807877	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intron	.	.	Alu	0.025641
7	72829753	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.413793
7	72999529	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.8
7	84939766	A->G	-	ENSG00000280325	AC074183.2	TEC	Intron	.	.	Alu	1
7	99081289	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intron	.	.	Alu	0.416667
7	99081304	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intron	.	.	Alu	0.230769
8	55893893	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.0833333
8	55893924	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.0909091
8	98043143	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0967742
9	19125558	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intron	.	.	Alu	0.133333
9	34201330	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.0740741
9	34201344	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.130435
9	34201346	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.130435
9	34201368	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.153846
9	34201399	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.111111
9	34201476	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.666667
9	34201485	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.105263
9	40992722	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.06
9	40993414	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.15
9	40993428	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.125
9	41008967	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.424242
9	41011651	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.170213
9	62809968	A->G	+	ENSG00000238113	LINC01410	lincRNA	Intron	.	.	Alu	0.615385
9	98115921	A->G	-	ENSG00000274011	RF00017	misc_RNA	Intron	.	.	Alu	0.153846
9	98115931	A->G	-	ENSG00000274011	RF00017	misc_RNA	Intron	.	.	Alu	0.166667
10	17230755	A->G	+	ENSG00000026025	VIM	protein_coding	Intron	.	.	Alu	0.533333
10	28523048	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.111111
10	28523253	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.136364
10	32282404	A->G	-	ENSG00000226842	AL158834.1	antisense	Intron	.	.	Alu	0.2
10	79349922	A->G	+	ENSG00000108179	PPIF	protein_coding	Intron	.	.	Alu	0.0833333
10	80181248	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intron	.	.	Alu	0.111111
11	16756339	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.727273
11	16756344	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.166667
11	16756363	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.357143
11	65180228	A->G	-	ENSG00000254614	AP003068.2	antisense	Intron	.	.	Alu	0.0909091
11	65441344	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0264317
11	65441417	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0305344
11	65442619	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.465839
11	65442627	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.171975
11	65442662	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0520833
11	65442670	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0757576
11	65442701	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.149758
11	65442702	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0392157
11	65442703	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.107843
11	76441564	A->G	-	ENSG00000255135	AP002360.1	lincRNA	Intron	.	.	Alu	0.2
11	93733708	A->G	-	ENSG00000284458	MIR1304	miRNA	Intron	.	.	Alu	0.416667
11	93733755	A->G	-	ENSG00000284458	MIR1304	miRNA	Intron	.	.	Alu	0.125
12	45842075	A->G	+	ENSG00000189079	ARID2	protein_coding	Intron	.	.	Alu	0.166667
12	47209309	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intron	.	.	Alu	0.0416667
12	53296612	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.307692
12	53297204	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.2
12	53297273	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.2
12	53297276	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.15
12	68649120	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.117647
12	68649184	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.0882353
12	68649248	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.133333
12	68649281	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.0789474
12	68649284	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.0465116
12	68649929	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.117647
12	68649951	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.0833333
12	68649993	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.166667
12	70322135	A->G	+	ENSG00000279530	AC092881.1	TEC	Intron	.	.	Alu	0.3125
13	32524825	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.444444
13	32524847	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.357143
13	32524860	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.166667
13	32524891	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.411765
13	32524901	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.111111
13	40912627	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
13	40912631	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.266667
13	40912633	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.266667
14	58293823	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0952381
14	58293854	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.06
14	58293876	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0444444
14	58293880	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0714286
14	58293915	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0576923
14	58293922	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0740741
14	58294014	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.14
14	58294015	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.1
14	58295331	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.04
14	58295723	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0714286
14	74660446	A->G	-	ENSG00000119682	AREL1	protein_coding	Intron	.	.	Alu	0.4
15	22681558	A->G	+	ENSG00000276141	WHAMMP3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.170732
15	22681586	A->G	+	ENSG00000276141	WHAMMP3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.272727
15	41234163	A->G	+	ENSG00000187446	CHP1	protein_coding	Intron	.	.	Alu	0.181818
15	41298671	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.047619
15	41298752	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0666667
15	41298841	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0714286
15	41308882	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.181818
15	45433807	A->G	+	ENSG00000166920	C15orf48	protein_coding	Intron	.	.	Alu	0.2
15	45433876	A->G	+	ENSG00000166920	C15orf48	protein_coding	Intron	.	.	Alu	0.153846
15	51567307	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.454545
15	51567917	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.461538
15	51567951	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.111111
15	51567974	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.315789
15	51567975	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.0952381
15	51567982	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.1
15	74026336	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.111111
15	74026374	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.3125
15	74026432	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.24
15	74026725	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.235294
15	74026730	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.111111
15	74026731	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.166667
15	74027392	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.111111
15	74027423	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.157895
15	74027445	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.181818
15	74027453	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.416667
15	74466044	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.153846
15	74466055	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.133333
15	78890672	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.419355
15	84569805	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.727273
15	84569831	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.5
15	89094205	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intron	.	.	Alu	0.125
16	18879192	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.181818
16	18879227	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.142857
16	18879248	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.272727
16	18879254	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.272727
16	21519844	A->G	-	ENSG00000258186	SLC7A5P2	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0629371
16	21520173	A->G	-	ENSG00000258186	SLC7A5P2	transcribed_processed_pseudogene	Intron	.	.	Alu	0.744186
16	31062575	A->G	-	ENSG00000232748	AC135050.1	lincRNA	Intron	.	.	Alu	0.416667
16	31062642	A->G	-	ENSG00000232748	AC135050.1	lincRNA	Intron	.	.	Alu	0.230769
16	31062664	A->G	-	ENSG00000232748	AC135050.1	lincRNA	Intron	.	.	Alu	0.125
16	31122518	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.6875
16	31122589	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.166667
16	31122598	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.52381
16	31360584	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intron	.	.	Alu	0.05
16	31457749	A->G	-	ENSG00000260267	AC026471.1	antisense	Intron	.	.	Alu	0.166667
16	56940367	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intron	.	.	Alu	0.0967742
16	71743503	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intron	.	.	Alu	0.111111
16	71750448	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intron	.	.	Alu	0.0869565
16	89520538	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.3
17	27297265	A->G	+	ENSG00000109046	WSB1	protein_coding	Intron	.	.	Alu	0.125
17	27297266	A->G	+	ENSG00000109046	WSB1	protein_coding	Intron	.	.	Alu	0.1875
17	28672744	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intron	.	.	Alu	0.545455
17	46156799	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.105263
17	46156816	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.133333
17	46156830	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.230769
17	48865266	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intron	.	.	Alu	0.166667
17	51031209	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intron	.	.	Alu	0.142857
17	62004962	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.272727
17	62005458	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.2
17	62005505	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.333333
17	62005537	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.4
17	62005543	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.117647
17	62005600	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.25
17	64783240	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
17	68274452	A->G	-	ENSG00000141337	ARSG	protein_coding	Intron	.	.	Alu	0.0740741
17	76559811	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.181818
17	82265316	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.153846
17	82265317	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.214286
18	21701285	A->G	-	ENSG00000158201	ABHD3	protein_coding	Intron	.	.	Alu	0.08
18	49390780	A->G	-	ENSG00000141627	DYM	protein_coding	Intron	.	.	Alu	0.142857
18	63396345	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.272727
18	63396467	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.133333
18	63396470	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.333333
18	63396509	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.214286
18	63396928	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.181818
18	63396943	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.272727
18	63396946	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.272727
19	12787178	A->G	+	ENSG00000263800	MIR5684	miRNA	Intron	.	.	Alu	0.166667
19	13836464	A->G	-	ENSG00000207808	MIR27A	miRNA	Intron	.	.	Alu	0.05
19	13836514	A->G	-	ENSG00000207808	MIR27A	miRNA	Intron	.	.	Alu	0.205479
19	19789691	A->G	-	ENSG00000267481	AC011477.2	sense_intronic	Intron	.	.	Alu	0.2
19	19789694	A->G	-	ENSG00000267481	AC011477.2	sense_intronic	Intron	.	.	Alu	0.2
19	19796194	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.272727
19	48257491	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.2
19	52927663	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.176471
19	52927693	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.2
19	52928037	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.111111
19	52928170	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0909091
19	52928243	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.230769
19	52928244	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.153846
19	54309275	A->G	-	ENSG00000187116	LILRA5	protein_coding	Intron	.	.	Alu	0.105263
19	54309383	A->G	-	ENSG00000187116	LILRA5	protein_coding	Intron	.	.	Alu	0.0952381
19	57304851	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.153846
19	57304919	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.9
19	57305599	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.1875
19	57305637	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.5
19	57305645	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.307692
19	57305648	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.615385
19	57305653	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.153846
19	58582511	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.285714
19	58584166	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.1
20	13617105	A->G	-	ENSG00000089123	TASP1	protein_coding	Intron	.	.	Alu	0.769231
20	63571516	A->G	-	ENSG00000130589	HELZ2	protein_coding	Intron	.	.	Alu	0.270833
21	41427937	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.269231
21	41427975	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.181818
21	41427980	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.157895
21	41428035	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.15
21	41428051	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.157895
21	41429857	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.6
21	41429858	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.285714
22	38953404	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intron	.	.	Alu	0.333333
22	38953407	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intron	.	.	Alu	0.166667
22	49806057	A->G	-	ENSG00000279345	Z98885.3	antisense	Intron	.	.	Alu	0.133333
22	49806142	A->G	-	ENSG00000279345	Z98885.3	antisense	Intron	.	.	Alu	0.166667
1	167641571	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0769231
1	179869117	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.08
1	207769980	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.411765
1	224413080	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.0571429
1	224413106	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.0645161
1	224413126	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.0487805
1	224413185	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.333333
2	131470076	A->G	-	ENSG00000173272	MZT2A	protein_coding	Intron	.	.	Alu	0.166667
2	196153071	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.0810811
2	196154182	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.0714286
2	200819121	A->G	+	ENSG00000082153	BZW1	protein_coding	Intron	.	.	Alu	0.105263
2	218233206	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.153846
2	218233274	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.125
2	218233278	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.111111
2	218233298	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.533333
2	218233303	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.117647
2	218233310	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.15
2	218233989	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.130435
2	218235276	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.181818
2	218235279	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.157895
2	218235293	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.2
2	218235316	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.142857
2	218235334	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0512821
2	218235364	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.186047
2	218235420	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.184211
2	218235426	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.409091
2	218235450	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.166667
2	218235826	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0789474
2	218235832	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0606061
2	218235855	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.296296
2	218235856	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.285714
2	218235861	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.225806
2	218235943	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.333333
2	218235969	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0689655
2	218235970	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.2
2	218235983	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.545455
2	218235993	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0909091
2	218236011	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0645161
2	218236065	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.121212
2	218236607	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.105263
2	218236685	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.142857
2	218236698	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.142857
2	218255965	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.133333
2	218255967	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.133333
2	218256028	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.3125
2	218256578	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.5
2	218256579	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.5
2	218256739	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.153846
2	218398898	A->G	+	ENSG00000273361	AC021016.3	antisense	Intron	.	.	Alu	0.272727
3	160412660	A->G	+	ENSG00000248710	AC079594.2	protein_coding	Intron	.	.	Alu	0.1
3	196905000	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.0909091
3	196905029	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.111111
3	196905081	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.111111
3	196905083	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.25
3	196913901	A->G	+	ENSG00000230732	AC016949.1	sense_intronic	Intron	.	.	Alu	0.153846
4	102811557	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.105263
4	102811569	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.08
4	102811619	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0645161
4	102811664	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0714286
4	102811668	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0740741
4	151103269	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.4
4	151103354	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0967742
4	158836564	A->G	+	ENSG00000052795	FNIP2	protein_coding	Intron	.	.	Alu	0.2
4	189960993	A->G	+	ENSG00000109536	FRG1	protein_coding	Intron	.	.	Alu	0.105263
5	157106136	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intron	.	.	Alu	0.222222
5	180835080	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.5
5	180835373	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.25
5	181313887	A->G	+	ENSG00000238035	AC138035.1	lincRNA	Intron	.	.	Alu	0.666667
6	132753901	A->G	-	ENSG00000234484	AL032821.1	antisense	Intron	.	.	Alu	0.133333
6	132753914	A->G	-	ENSG00000234484	AL032821.1	antisense	Intron	.	.	Alu	0.111111
6	138951144	A->G	-	ENSG00000135597	REPS1	protein_coding	Intron	.	.	Alu	0.2
7	105103966	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.181818
7	105103969	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.307692
7	105104099	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.117647
7	105104574	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.230769
7	105104596	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.454545
7	128529029	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.285714
7	128529072	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.181818
7	128529096	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.181818
7	130928469	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.0869565
7	130928484	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.0909091
7	130928490	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.105263
7	130928630	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.166667
7	130938012	A->G	-	ENSG00000273319	AC058791.1	lincRNA	Intron	.	.	Alu	0.0714286
7	130944865	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.235294
7	130944867	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.205882
7	130945233	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.0888889
7	130945478	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.520833
8	129949029	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intron	.	.	Alu	0.181818
8	129949034	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intron	.	.	Alu	0.2
9	112035925	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.3
9	112036800	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.153846
9	112036801	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.461538
9	129504210	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.272727
9	129506015	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0487805
9	129506067	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0689655
9	129506601	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.166667
9	129506776	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0666667
10	103169429	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intron	.	.	Alu	0.473684
10	112449592	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.04
10	112450126	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.025641
10	112450166	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0208333
10	119105381	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intron	.	.	Alu	0.166667
11	118788577	A->G	-	ENSG00000110367	DDX6	protein_coding	Intron	.	.	Alu	0.05
11	119010129	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.363636
12	100051854	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intron	.	.	Alu	0.2
12	104552337	A->G	+	ENSG00000279176	AC079316.2	TEC	Intron	.	.	Alu	0.166667
12	110325908	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intron	.	.	Alu	0.2
12	110331481	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intron	.	.	Alu	0.2
12	121213155	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.266667
12	121213218	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.133333
12	121213305	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.266667
12	121213307	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.214286
12	121213562	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.727273
12	121213563	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.833333
12	121213564	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.666667
12	121213582	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.333333
12	121213622	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.238095
12	121213626	A->G	-	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.105263
12	121213628	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.652174
12	121213629	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.434783
12	121213677	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.1
12	121213692	A->G	-	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.3
12	121213770	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.241379
12	121213788	A->G	-	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.172414
12	121213795	A->G	-	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.375
12	121213796	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.173913
12	121213835	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.1
12	121213931	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.115385
12	121213936	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0769231
12	121213944	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.107143
12	121213945	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0714286
12	121213972	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.1
12	121213994	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.2
12	121214055	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.666667
12	121214065	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.416667
12	121214116	A->G	-	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0909091
12	121214122	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.2
12	121214854	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.1
12	121214884	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0833333
12	121214885	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.25
12	121214902	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.157895
12	121214966	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0909091
12	121215774	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0740741
12	121215801	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0952381
12	121216740	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.1875
12	121216741	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.176471
12	121223259	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.52381
12	121223338	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.142857
12	121223344	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.0909091
12	122221541	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.3
12	122342664	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intron	.	.	Alu	0.25
12	122342681	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intron	.	.	Alu	0.133333
12	122507181	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.55
12	122507231	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.411765
12	122508000	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.125
12	123459035	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.230769
12	123459036	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.142857
12	123459039	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.230769
14	102045224	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.181818
X	119539445	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	119539448	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.5
X	119539449	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	123909128	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.3125
X	123909129	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.470588
X	123909168	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.25
X	123909231	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.5
X	123909292	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.15
X	123909307	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.15
X	123911291	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123911298	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	123912933	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123912947	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1
X	123913225	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123913349	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	16763106	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	16763152	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	16763192	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	16763211	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16763235	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16763379	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	16763564	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
X	16763575	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.4
X	16763635	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	16764824	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16764925	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	2487001	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	1
X	2906853	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	2907073	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.217391
X	30836638	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	30836719	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	46603595	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	46603682	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	46604466	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	46604608	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	46604627	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0967742
X	46605109	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	46605169	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	46606043	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	46606117	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	46606133	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.1
X	77827620	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0375
X	77827643	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0243902
X	77827669	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.028169
X	77828246	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
X	77828348	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0273973
X	77828398	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
X	77828480	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.038961
X	77828563	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
X	77906871	A->G	+	ENSG00000131174	COX7B	protein_coding	three_prime_utr	.	.	Alu	1
1	1563769	A->G	-	ENSG00000160075	SSU72	protein_coding	three_prime_utr	.	.	Alu	0.0454545
1	1729453	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.12
1	1729478	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.0869565
1	1729548	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.117647
1	1729550	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.117647
1	1729608	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	1729652	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	1729971	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.533333
1	1729985	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.0952381
1	1730032	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.133333
1	6522101	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	6522116	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	6522438	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	1386859	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.2
4	1386863	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	1389397	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	1389449	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	1389451	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	2839294	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0307692
4	2839295	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.030303
4	2839298	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0273973
4	2839593	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.62963
4	2839625	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.73913
4	2839632	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	2839633	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	2839661	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.305556
4	2839694	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	2839697	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.128205
4	2839704	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	2839707	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	2839729	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.366667
4	2839757	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
4	2839793	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	2839825	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.277778
4	2839838	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.075
4	2839840	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.121951
4	2839844	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	2839979	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.06
4	2840002	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.15
4	2840010	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	2840132	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.121212
4	2840158	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.05
4	2840177	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
4	2840207	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
4	2840240	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	2840241	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	2840243	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	2840244	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.2
6	3021186	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	3021875	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.125
6	3022224	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	3022474	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	7283319	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.105263
7	2442594	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.2
8	1782342	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	9750194	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.0298507
12	6819739	A->G	+	ENSG00000010610	CD4	protein_coding	three_prime_utr	.	.	Alu	0.522472
12	6819747	A->G	+	ENSG00000010610	CD4	protein_coding	three_prime_utr	.	.	Alu	0.53012
12	6819852	A->G	+	ENSG00000010610	CD4	protein_coding	three_prime_utr	.	.	Alu	0.498929
12	6976418	A->G	-	ENSG00000126749	EMG1	protein_coding	three_prime_utr	.	.	Alu	0.771429
12	7919412	A->G	-	ENSG00000059804	SLC2A3	protein_coding	three_prime_utr	.	.	Alu	0.496753
12	9696287	A->G	+	ENSG00000069493	CLEC2D	protein_coding	three_prime_utr	.	.	Alu	1
12	9752880	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	1
12	9753471	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	1
16	9106317	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0714286
16	9106409	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0437956
17	1570020	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0229885
17	1572921	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0204082
17	1572928	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.244681
17	1572956	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.039604
17	1572990	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.031746
17	1573051	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.416667
17	1573054	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.137931
17	1573081	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.189655
17	1573093	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	1573758	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
17	1573784	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0348837
17	1573864	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.121212
17	1573890	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.1
17	1573893	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.171429
17	3915806	A->G	-	ENSG00000108405	P2RX1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	5489933	A->G	+	ENSG00000167842	MIS12	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	2072358	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.0254777
19	2072397	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
19	7084369	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.526316
19	7084370	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	7084420	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7084454	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.25
19	7084455	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.4
19	7084492	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	7084542	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	7084567	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.294118
19	7084588	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	7084618	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	7084627	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.206897
19	7084629	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	7084633	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	7085285	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.15
19	7085399	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	7085407	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7085416	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	7085972	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.391304
19	7085975	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	7086029	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7086031	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	7086043	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	7086071	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.1
19	7086084	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	7086124	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7086125	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	7087285	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.125
19	7087286	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	8540447	A->G	-	ENSG00000142347	MYO1F	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	9561707	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	9561789	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	9562795	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.1
19	9562990	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	9562996	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	9564296	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	9565425	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.4
19	9565487	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	9565530	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.125
19	9648711	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3869355	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.3
20	3871102	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3871110	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	5194877	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.216216
20	5194878	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.135135
20	5194893	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.5
20	5194900	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.227273
20	5195158	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.4
20	5195159	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.204082
20	5195166	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.183673
1	15491499	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	15491501	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	15491570	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19216129	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.2
1	19217508	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.3
1	23961914	A->G	+	ENSG00000189266	PNRC2	protein_coding	three_prime_utr	.	.	Alu	0.478022
1	24537854	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	24537878	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	24538843	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.266667
1	24538858	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.222222
1	28499659	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	32632233	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	35602074	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0235294
1	35602110	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0307692
1	35602555	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
1	52409490	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	52409491	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	52824082	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	52824518	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.583333
1	54027524	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	54027534	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.3
1	54030520	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	54030530	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	54030539	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	54030542	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	54030544	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	54030566	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	86746774	A->G	+	ENSG00000097033	SH3GLB1	protein_coding	three_prime_utr	.	.	Alu	0.396226
1	89182646	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	90031154	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	90032181	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	24000294	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	24000343	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	24001252	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	24002670	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	26780081	A->G	+	ENSG00000213699	SLC35F6	protein_coding	three_prime_utr	.	.	Alu	0.0285714
2	37100426	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37100446	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.326087
2	37100447	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.195652
2	37100471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37100519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.714286
2	37100523	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.35
2	37100559	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.64
2	37100869	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.241379
2	37100870	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.62963
2	37100873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	37100932	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.375
2	37100939	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	37100944	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.541667
2	37100954	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.566667
2	37101248	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.12766
2	37101540	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.259259
2	37102091	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	37102177	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	37103261	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37103389	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37103959	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	37103991	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	37103992	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	37104093	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37104096	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37104132	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.217391
2	37104134	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	37104786	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.5
2	37104790	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.290323
2	37104873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	37104881	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	37104899	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.128205
2	37106959	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.03125
2	37202484	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	60899222	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.0363636
2	60899231	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.04
2	60899404	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	60900703	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.0277778
2	60900706	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	60900708	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.0344828
2	60900757	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	61050190	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.25
2	61050199	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	61050216	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	61050229	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	61050249	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	61050255	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.25
2	61050269	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.4
2	69461717	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	69461720	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	69462619	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	69463445	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	69463467	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	96249150	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	96249160	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	96249291	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	96249325	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	96249368	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	96249500	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.202532
2	96249502	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.037037
2	96249514	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0649351
2	96249516	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0289855
2	96249536	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0517241
2	96249537	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	96249575	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.220588
2	96249578	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0289855
2	97163650	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	99196566	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.2
3	10150914	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0327869
3	10150949	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	10151674	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.15625
3	10243307	A->G	+	ENSG00000134070	IRAK2	protein_coding	three_prime_utr	.	.	Alu	0.0294118
3	15072187	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.148148
3	15072209	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.25
3	15072226	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	15072229	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.15625
3	15072235	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.121951
3	15072270	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.173913
3	15072309	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.233333
3	15072400	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	15072786	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	15072799	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	15072810	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.2
3	15072811	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	15072846	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.368421
3	15072852	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.25
3	15072893	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	15072894	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.35
3	15072897	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	15072914	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.2
3	15072986	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	23921708	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	23921837	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	23923013	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	23923026	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	23923078	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.125
3	23923481	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	32955735	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	32955739	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.538462
3	32955749	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.636364
3	40463403	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	44749356	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	48749565	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.04
3	48749765	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0416667
3	48749992	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0465116
3	48750055	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.15
3	48750152	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.05
3	48750360	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.09375
3	48750474	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0652174
3	49359890	A->G	-	ENSG00000067560	RHOA	protein_coding	three_prime_utr	.	.	Alu	0.293587
3	49415369	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0444444
3	49415395	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0638298
3	49415457	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	57272623	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.05
3	57627292	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
4	10442053	A->G	-	ENSG00000178163	ZNF518B	protein_coding	three_prime_utr	.	.	Alu	0.384615
4	17626928	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801882	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	17801914	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.724138
4	17801930	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.269231
4	17803037	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0392157
4	17803082	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0377358
4	77718349	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0597015
4	77718351	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0704225
4	81455407	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	three_prime_utr	.	.	Alu	0.0227273
5	37290871	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	37290882	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	65668091	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.3
5	65668117	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	65668135	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.2
5	65668145	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	65668146	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65668147	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	65668189	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.25
5	65668203	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.5
5	65668204	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	65668226	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.3
5	65668234	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	65668353	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.176471
5	65668365	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.193548
5	65668392	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.075
5	65668393	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	65668418	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.08
5	65668444	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	65668485	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.318182
5	65668487	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.304348
5	65668498	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	65668499	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	65668558	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	65668561	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	65668575	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	65668592	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	65668613	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	65668617	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.26087
5	65668641	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	65668796	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	65668799	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.210526
5	65668808	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.1
5	65668839	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.173913
5	65668845	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	65668875	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.565217
5	65668891	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.692308
5	65668903	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	75378006	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.4
5	75378047	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	75378053	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.2
5	75378054	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	75378344	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.2
5	75378986	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	75378991	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	78777740	A->G	-	ENSG00000113273	ARSB	protein_coding	three_prime_utr	.	.	Alu	0.0444444
5	80140118	A->G	-	ENSG00000251675	AC010260.1	antisense	three_prime_utr	.	.	Alu	0.133333
5	96774782	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
5	96774840	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.385714
6	12037976	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	12037977	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.241379
6	12037980	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	12037984	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	12037989	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.32
6	12038419	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	12038463	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	13288416	A->G	+	ENSG00000215022	AL008729.1	antisense	three_prime_utr	.	.	Alu	1
6	18128858	A->G	-	ENSG00000137364	TPMT	protein_coding	three_prime_utr	.	.	Alu	0.2
6	25986312	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.2
6	36140799	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	36140856	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.3
6	36141036	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.2
6	36141063	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.2
6	36141627	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.2
6	37028844	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
6	42079582	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42888592	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.121212
6	73424286	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	73424347	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	73425032	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0888889
6	73425057	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	73425146	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0857143
7	17344710	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.104689
7	17344782	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0235043
7	17344829	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0424757
7	17344889	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.025974
7	17345053	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0345745
7	17345108	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0208955
7	17345159	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0235043
7	17345235	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.025
7	17345302	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0218447
7	25121116	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.2
7	44801788	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.139785
7	44801789	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.126316
7	44801790	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0531915
7	44802200	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	44802500	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.379747
7	48103958	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.3
7	48103964	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.2
7	48103965	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	66153223	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	66153248	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	66153379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	66153604	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0930233
7	66154302	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0425532
8	11842824	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0645161
8	11843077	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.186047
8	11843081	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.047619
8	23191572	A->G	-	ENSG00000104689	TNFRSF10A	protein_coding	three_prime_utr	.	.	Alu	0.047619
8	38970768	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0789474
8	38971892	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0416667
8	38971896	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0833333
8	38972210	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0784314
8	38972291	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0526316
8	38972477	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0377358
8	38972949	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0434783
8	43021325	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.08
8	43123302	A->G	+	ENSG00000185900	POMK	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	51818304	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	1
8	55825021	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	55825022	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	55825183	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	56012468	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	56012553	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	56012555	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	56012660	A->G	+	ENSG00000254087	LYN	protein_coding	three_prime_utr	.	.	Alu	0.363636
9	36215214	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	36216029	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0857143
9	37503322	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	71973051	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	86266970	A->G	-	ENSG00000135070	ISCA1	protein_coding	three_prime_utr	.	.	Alu	0.8
9	86267125	A->G	-	ENSG00000135070	ISCA1	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	20284286	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.125
10	20284468	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.16129
10	20284491	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
10	20284492	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.119048
10	20284521	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0862069
10	20284544	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
10	20284568	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.15493
10	20284569	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
10	20286799	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.04
10	20286850	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
10	49973602	A->G	+	ENSG00000178440	LINC00843	lincRNA	three_prime_utr	.	.	Alu	0.3
10	68479903	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	68479904	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	68479916	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	68479929	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	68479948	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	72234025	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.727273
10	72234242	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.285714
10	72234260	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	72234347	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.111111
10	72235435	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0689655
10	72235453	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0833333
10	73250301	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.121212
10	73250304	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.09375
10	99713890	A->G	+	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.2
11	36487058	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	36487077	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	36487083	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.1
11	44619551	A->G	+	ENSG00000085117	CD82	protein_coding	three_prime_utr	.	.	Alu	0.0338983
11	44619575	A->G	+	ENSG00000085117	CD82	protein_coding	three_prime_utr	.	.	Alu	0.0232558
11	44619577	A->G	+	ENSG00000085117	CD82	protein_coding	three_prime_utr	.	.	Alu	0.021978
11	65775999	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.106383
11	65776028	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.108696
11	65776055	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
11	65776853	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0235294
11	65776952	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.025641
11	65776989	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0363636
11	65777038	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0535714
11	65777064	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
11	74455946	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.230769
11	74455955	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.153846
11	78068964	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	10315252	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.3
12	10315862	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	10315863	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	10316482	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.25
12	10316496	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	14498926	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	27030259	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	42233572	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	42233603	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	42233626	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	42233640	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	42233692	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	42233695	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	42233716	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	42233786	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	42233794	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.318182
12	42233914	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	42233926	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	42233979	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	42233988	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.6
12	42234005	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	42234008	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	42234071	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.5
12	42234088	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	42234135	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.526316
12	42234791	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	42234981	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.08
12	50930603	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	50930821	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.025641
12	50930853	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.028169
12	59783729	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	59783745	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	59783751	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	59783752	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.636364
12	59783860	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.2
12	62335860	A->G	+	ENSG00000135655	USP15	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	66137369	A->G	-	ENSG00000228144	AC078927.1	protein_coding	three_prime_utr	.	.	Alu	1
12	68662814	A->G	+	ENSG00000127314	RAP1B	protein_coding	three_prime_utr	.	.	Alu	0.2
12	68663144	A->G	+	ENSG00000127314	RAP1B	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	68843224	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.254902
12	68843233	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.22449
12	68843234	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.0625
12	68843262	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0754717
12	68843263	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	68843273	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	68843277	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0634921
12	68843293	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.119403
12	68843729	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.219512
12	68843730	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.1
12	68843746	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	68843754	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	68843772	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	68843778	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.150943
12	68843847	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0638298
12	75496037	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	75496091	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
13	21374322	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0517241
13	21374472	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0533333
13	21374891	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0588235
13	21375025	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0353982
13	21375108	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0258621
13	27066382	A->G	-	ENSG00000152484	USP12	protein_coding	three_prime_utr	.	.	Alu	0.111111
13	27650363	A->G	+	ENSG00000186184	POLR1D	protein_coding	three_prime_utr	.	.	Alu	0.52381
13	32510770	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	45334139	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.25
13	51444686	A->G	-	ENSG00000102786	INTS6	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	52691128	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
13	52692511	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	21460331	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.183673
14	21460373	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0540541
14	21460402	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.208333
14	21460413	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.130435
14	21460419	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	21460499	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	21460522	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.3
14	21460523	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	21460541	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	21460547	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	21460725	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0555556
14	21460786	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.103448
14	21460837	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	21460839	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.692308
14	21460840	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	21460855	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.217391
14	31094336	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	31094371	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	49575735	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	49576222	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.5
14	49576244	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	49576375	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	49576376	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.583333
14	50326015	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50326891	A->G	+	ENSG00000259071	AL359397.2	lincRNA	three_prime_utr	.	.	Alu	0.181818
14	50633569	A->G	-	ENSG00000151748	SAV1	protein_coding	three_prime_utr	.	.	Alu	0.636364
14	52642959	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.0612245
14	52642960	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.0612245
14	52643092	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.137931
14	52643105	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	54479561	A->G	-	ENSG00000197045	GMFB	protein_coding	three_prime_utr	.	.	Alu	0.294118
14	55367700	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	55367730	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	55368247	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.136364
14	57413755	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	57413756	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	57414150	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.125
14	57414156	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.25
14	73221656	A->G	+	ENSG00000080815	PSEN1	protein_coding	three_prime_utr	.	.	Alu	0.0289855
14	74058241	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	76207129	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	76207169	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	76207201	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	76207205	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	89160423	A->G	-	ENSG00000053254	FOXN3	protein_coding	three_prime_utr	.	.	Alu	0.0625
15	34231299	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	34231679	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	41900147	A->G	-	ENSG00000103966	EHD4	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	42531590	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	42543418	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	50703158	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0625
15	50704098	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	50704108	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	50704132	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	50704151	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	50704160	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	50705098	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	50705124	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	50705178	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
15	50705201	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	50705219	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	50705254	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	50705258	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.4
15	50705259	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.4375
15	50705280	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	50705299	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.2
15	50707283	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51913793	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	60422181	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.2
15	64931950	A->G	+	ENSG00000166839	ANKDD1A	protein_coding	three_prime_utr	.	.	Alu	0.2
15	65149363	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.2
15	75419563	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	75419572	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	75419819	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	75420458	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.121212
15	75420666	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	83005491	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	89196044	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.0895522
15	89196046	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.0704225
15	89196117	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	90273839	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	10925485	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	11548710	A->G	-	ENSG00000189067	LITAF	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11835278	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	11837235	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	15700280	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	15700338	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	21640494	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.375
16	21640506	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.857143
16	21640507	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.384615
16	21640707	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.466667
16	21640710	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	21640720	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	21640721	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.25
16	23465153	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.108108
16	23465841	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	29665099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0272727
16	29668041	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	29668184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0659341
16	29669044	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29670337	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	31358407	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.148148
16	31358411	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.22619
16	48352382	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.125
16	48352531	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	48354392	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	50673239	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	50673255	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	66547976	A->G	-	ENSG00000166548	TK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	70249182	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	70249316	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	70249745	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	70376772	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	70376808	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	70376839	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70376848	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70377380	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.5
16	70378221	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70378751	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	70378752	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	70378799	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	70379694	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.0365854
16	70574736	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	75445984	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	87403158	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	three_prime_utr	.	.	Alu	1
16	89740593	A->G	+	ENSG00000158805	ZNF276	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	17189269	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	17189306	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	20237791	A->G	+	ENSG00000128487	SPECC1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	27314465	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	27314469	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.466667
17	30958692	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0566038
17	30958768	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0350877
17	30958828	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0576923
17	32373457	A->G	+	ENSG00000010244	ZNF207	protein_coding	three_prime_utr	.	.	Alu	0.315789
17	35010603	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0289855
17	35010665	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0253165
17	35010669	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0273973
17	35473949	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.642857
17	35474671	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	37614098	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	38848367	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.2
17	38848384	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39254090	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39255664	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39256095	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39759172	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39760233	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39760268	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39760295	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39761058	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.583333
17	39761460	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.1
17	39761470	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	39761482	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	39761951	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39761977	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	39761978	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	39762630	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	39763911	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	39763916	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.48
17	39763951	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.304348
17	39763952	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.875
17	39763965	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.173913
17	39763991	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39764008	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	39764032	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.125
17	39764207	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.5
17	39764299	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.380952
17	39764317	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39764344	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	39764369	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.318182
17	39764382	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.636364
17	39764403	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	39764408	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	39764419	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.375
17	40280451	A->G	+	ENSG00000171475	WIPF2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
17	40280458	A->G	+	ENSG00000171475	WIPF2	protein_coding	three_prime_utr	.	.	Alu	0.03125
17	49295202	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.16129
17	49295203	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	49296666	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	49296668	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.25
17	49296739	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.08
17	49296740	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.16
17	49830294	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.15
17	49831057	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	49831076	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	49831155	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	49831196	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	49831211	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	49831226	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	49831231	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	49831258	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.1
17	49831260	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	49831902	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	49832055	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	49832056	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	49832073	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	49832199	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.263158
17	50965061	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	57972463	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	64467759	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	64467764	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	64467867	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64467895	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.5
17	64468320	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.254902
17	64468344	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	64468472	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	75166418	A->G	-	ENSG00000189159	JPT1	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32068904	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0740741
18	32070121	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.04
18	32070177	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0392157
18	32070318	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0375
18	32070378	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.057971
18	32070913	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.05
18	32070938	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0425532
18	32071154	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0425532
18	32071410	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0265487
18	32071913	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.1
18	32072142	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0512821
18	46080672	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	three_prime_utr	.	.	Alu	0.352941
18	46080678	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	three_prime_utr	.	.	Alu	0.117647
18	46081067	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	three_prime_utr	.	.	Alu	0.210526
18	59329953	A->G	-	ENSG00000074695	LMAN1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	11450479	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	11450482	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	11450543	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	11450544	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.236364
19	11450560	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	11450569	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0980392
19	12079112	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	13773048	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	14734248	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	14734310	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
19	14734438	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
19	14734677	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
19	14735293	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0283019
19	14735314	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	14735340	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.020202
19	14735362	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0520833
19	14735363	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
19	14735372	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0277778
19	16093075	A->G	+	ENSG00000167460	TPM4	protein_coding	three_prime_utr	.	.	Alu	0.15625
19	16552528	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.031746
19	18070688	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.225806
19	18070850	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	18071034	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18071054	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.12
19	18071071	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	18364534	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	18365366	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18366654	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18368351	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	19680736	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.2
19	19792366	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.294118
19	19792376	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.428571
19	21184174	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21185565	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	21291623	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.0882353
19	21291818	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	23359285	A->G	-	ENSG00000167232	ZNF91	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	34227395	A->G	+	ENSG00000257103	LSM14A	protein_coding	three_prime_utr	.	.	Alu	0.0697674
19	35159997	A->G	+	ENSG00000089327	FXYD5	protein_coding	three_prime_utr	.	.	Alu	0.3
19	36546279	A->G	-	ENSG00000186020	ZNF529	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	37485532	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.2
19	39426943	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	39426947	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.125
19	39427209	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	39427948	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	44662440	A->G	+	ENSG00000073008	PVR	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	51410760	A->G	-	ENSG00000142512	SIGLEC10	protein_coding	three_prime_utr	.	.	Alu	0.0363636
19	52556182	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	52556196	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	52556375	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	52556401	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	52556702	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	52839310	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	54237180	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	54353865	A->G	-	ENSG00000167613	LAIR1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
19	54888993	A->G	+	ENSG00000186431	FCAR	protein_coding	three_prime_utr	.	.	Alu	0.125
19	55661834	A->G	+	ENSG00000063244	U2AF2	protein_coding	three_prime_utr	.	.	Alu	0.941176
19	57214550	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	57214562	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	57214588	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	57214614	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.125
19	57216139	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57860469	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	57860478	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57860489	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57860530	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57860673	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57860952	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.08
19	57860997	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	57861384	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	57861395	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	57861400	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	57861448	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57861817	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.05
19	57861821	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.05
19	57861823	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	57861847	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.171429
19	57861853	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1
19	57861872	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	57861899	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57861909	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57863275	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57863355	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	57863992	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	57864000	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.25
19	57864368	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.5
19	57864406	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	57864868	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	57907086	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57907087	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	57907102	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57907125	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	58127268	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	58127284	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	58127338	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	58127419	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	58127420	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	58296436	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	58296581	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58296628	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.5
19	58297036	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	58297054	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	58297486	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.125
19	58297540	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.533333
19	58297543	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	58297553	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	58297555	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	58297608	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.3
19	58297648	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.25
20	18487709	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	35652122	A->G	-	ENSG00000214078	CPNE1	protein_coding	three_prime_utr	.	.	Alu	0.0517241
20	45077422	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0288462
20	45077570	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0322581
20	45078286	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0294118
21	33264973	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.111111
21	42909743	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.428571
21	42909744	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.285714
21	42909760	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.545455
21	42909780	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	42909884	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.466667
21	42909887	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.6
21	42909937	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.285714
21	42909948	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.363636
21	42911666	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	17110289	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.030303
22	26523607	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	26523677	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	26523681	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.2
22	26523682	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	26523761	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	26523764	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	26523767	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	26524342	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	26524360	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
22	26524398	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
22	26525260	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.047619
22	26525261	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.047619
22	26525278	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
22	26525303	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	26525382	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	26525390	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.08
22	26525392	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.12
22	35659793	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.833333
22	35659860	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.125
22	35659866	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	35660002	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0465116
22	35660363	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.325
22	35660407	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.113636
22	35660444	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.5
22	35660445	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.403846
22	35660446	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.178571
22	35660543	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0535714
22	35660551	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.79661
22	35660685	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.276596
22	35660703	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.107143
22	35661179	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	35661199	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	35661264	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.2
22	39018933	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0740741
22	41599256	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.388889
22	41599288	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	41600324	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	42383337	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
22	42383481	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.157895
22	42383505	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	42383631	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.454545
22	44169871	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	44169886	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	44171445	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.2
22	44171923	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	45193983	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.642857
22	45194413	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.375
1	109596559	A->G	+	ENSG00000225113	AL355310.1	sense_overlapping	three_prime_utr	.	.	Alu	0.230769
1	109596574	A->G	+	ENSG00000225113	AL355310.1	sense_overlapping	three_prime_utr	.	.	Alu	0.181818
1	149555610	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.857143
1	149555663	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	149555673	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.875
1	149555763	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.866667
1	150308807	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	150731344	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0375427
1	150732032	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0380952
1	150732142	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0209059
1	150732161	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0321429
1	150732700	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0211907
1	151874542	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	160996586	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.030303
1	160996654	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0246914
1	160996683	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0408163
1	168249271	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.025
1	168249401	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	168251133	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	168251236	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0493827
1	168251272	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0215054
1	180202890	A->G	+	ENSG00000116260	QSOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	180202891	A->G	+	ENSG00000116260	QSOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	204552584	A->G	+	ENSG00000198625	MDM4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	207047366	A->G	-	ENSG00000123836	PFKFB2	protein_coding	three_prime_utr	.	.	Alu	0.386364
1	214351091	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.181818
1	225983579	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0379747
1	225983968	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0234375
1	225984003	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0265487
1	225984125	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
1	229322481	A->G	-	ENSG00000237481	AL117350.1	antisense	three_prime_utr	.	.	Alu	0.272727
1	247100164	A->G	-	ENSG00000188295	ZNF669	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	101271389	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0638298
2	101271462	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0512821
2	101271698	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.109589
2	128193917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	159770082	A->G	-	ENSG00000136536	7-Mar	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	159804432	A->G	-	ENSG00000054219	LY75	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	190934866	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.145833
2	201164032	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	201164041	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.148148
2	201166509	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.555556
2	201173837	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.2
2	201217939	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	201218142	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.1
2	201286881	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	203429630	A->G	+	ENSG00000138443	ABI2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	203429636	A->G	+	ENSG00000138443	ABI2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	206122595	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	206122812	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	207754527	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.225806
2	207754528	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	207754591	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	207754592	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.192308
2	207754594	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	207754595	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	207754596	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.346154
2	207754638	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	207754759	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	207754764	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	207754807	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.514286
2	207754860	A->G	+	ENSG00000284079	MIR4775	miRNA	three_prime_utr	.	.	Alu	0.294118
2	207754861	A->G	+	ENSG00000284079	MIR4775	miRNA	three_prime_utr	.	.	Alu	0.875
2	207754934	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	207755010	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	207755042	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	207755188	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0444444
2	207755259	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	207755276	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.05
2	207755298	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.05
2	207755405	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.44
2	207755419	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.538462
2	207755420	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	233205623	A->G	+	ENSG00000168918	INPP5D	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101824582	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.166667
3	101824588	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.25
3	101824609	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.133333
3	128071406	A->G	+	ENSG00000175792	RUVBL1	protein_coding	three_prime_utr	.	.	Alu	0.123077
3	141946665	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	141948846	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	142160927	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.2
3	142161988	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	142163537	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.2
3	142163824	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.25
3	142163830	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.769231
3	142184720	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	142184724	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.25
3	142184753	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	142184754	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	156540457	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0810811
3	156541525	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0487805
3	170089072	A->G	-	ENSG00000268220	AC008040.5	antisense	three_prime_utr	.	.	Alu	0.105263
3	170092022	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	179398428	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.909091
3	179398497	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.642857
3	179398517	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.285714
3	183683083	A->G	+	ENSG00000114796	KLHL24	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	188879039	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.592593
3	188880262	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	188880270	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	188883478	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.2
3	197784540	A->G	+	ENSG00000122068	FYTTD1	protein_coding	three_prime_utr	.	.	Alu	0.125
3	197784562	A->G	+	ENSG00000122068	FYTTD1	protein_coding	three_prime_utr	.	.	Alu	0.25
3	197784610	A->G	+	ENSG00000122068	FYTTD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	197784630	A->G	+	ENSG00000122068	FYTTD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	197784680	A->G	+	ENSG00000122068	FYTTD1	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	139045540	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0789474
4	139045646	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0346154
4	139045698	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0339623
4	139045701	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0420168
4	152624428	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.2
4	152625465	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	152625480	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	152625491	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	152625540	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.2
4	152625601	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	152625608	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	152625627	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.1
4	176330019	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0609756
4	176331087	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.13913
5	115206791	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	119394842	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	119394869	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.263158
5	122027184	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	122027214	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.125
5	134856412	A->G	+	ENSG00000181904	C5orf24	protein_coding	three_prime_utr	.	.	Alu	0.2
5	150364971	A->G	-	ENSG00000070814	TCOF1	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	151268176	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	151268178	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.037037
5	151268188	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0895522
5	151268664	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0590717
5	157477823	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.647059
5	157477845	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	157477914	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.238095
5	157477937	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.208333
5	157477938	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.125
5	157477957	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.354839
5	157478390	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.2
5	157478397	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.129032
5	157478552	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.75
5	157478553	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	168549878	A->G	-	ENSG00000120137	PANK3	protein_coding	three_prime_utr	.	.	Alu	0.04
5	173091961	A->G	+	ENSG00000164463	CREBRF	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	106970848	A->G	-	ENSG00000272398	CD24	protein_coding	three_prime_utr	.	.	Alu	1
6	108042167	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	108042172	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	108042554	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	108042615	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	108042685	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	108042693	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	116439040	A->G	+	ENSG00000285446	Z84488.2	protein_coding	three_prime_utr	.	.	Alu	0.705882
6	116439854	A->G	+	ENSG00000285446	Z84488.2	protein_coding	three_prime_utr	.	.	Alu	0.08
6	116439867	A->G	+	ENSG00000285446	Z84488.2	protein_coding	three_prime_utr	.	.	Alu	0.464286
6	116440398	A->G	+	ENSG00000285446	Z84488.2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	118813772	A->G	-	ENSG00000111877	MCM9	protein_coding	three_prime_utr	.	.	Alu	1
6	119178352	A->G	-	ENSG00000111885	MAN1A1	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	149591274	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0266667
6	149772198	A->G	+	ENSG00000120265	PCMT1	protein_coding	three_prime_utr	.	.	Alu	0.642857
7	102449614	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	128307852	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	150331697	A->G	+	ENSG00000188707	ZBED6CL	protein_coding	three_prime_utr	.	.	Alu	0.3
7	150331699	A->G	+	ENSG00000188707	ZBED6CL	protein_coding	three_prime_utr	.	.	Alu	0.3
9	128309290	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.2
9	128309294	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	129809747	A->G	+	ENSG00000136816	TOR1B	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	133362696	A->G	-	ENSG00000148248	SURF4	protein_coding	three_prime_utr	.	.	Alu	0.1
10	117281346	A->G	-	ENSG00000165650	PDZD8	protein_coding	three_prime_utr	.	.	Alu	1
10	131912596	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	three_prime_utr	.	.	Alu	0.527778
10	133300407	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	133300455	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	118750989	A->G	-	ENSG00000110367	DDX6	protein_coding	three_prime_utr	.	.	Alu	0.0583333
12	100626854	A->G	+	ENSG00000139354	GAS2L3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	100627498	A->G	+	ENSG00000139354	GAS2L3	protein_coding	three_prime_utr	.	.	Alu	0.206897
12	100627517	A->G	+	ENSG00000139354	GAS2L3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	100627530	A->G	+	ENSG00000139354	GAS2L3	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	108785196	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.097561
12	113391156	A->G	+	ENSG00000151176	PLBD2	protein_coding	three_prime_utr	.	.	Alu	0.3
12	113817884	A->G	-	ENSG00000122965	RBM19	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	115980603	A->G	-	ENSG00000123066	MED13L	protein_coding	three_prime_utr	.	.	Alu	0.125
12	116714713	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	122866246	A->G	-	ENSG00000256152	AC027290.1	lincRNA	three_prime_utr	.	.	Alu	0.0921053
12	123662022	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	132721653	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.129032
12	132770150	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	132770151	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	100279554	A->G	+	ENSG00000100811	YY1	protein_coding	three_prime_utr	.	.	Alu	0.0515464
14	105049500	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.151515
14	105049513	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.0666667
14	105049697	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.0555556