Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	effect	AA_change	Repeat	AD12_dx
MT	4917	A->G	+	ENSG00000198763	MT-ND2	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	1
MT	11251	A->G	+	ENSG00000198886	MT-ND4	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	1
MT	11812	A->G	+	ENSG00000198886	MT-ND4	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	1
MT	15326	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	1
MT	15607	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	synonymous_variant	p.Lys->Lys	Alu	1
X	315276	A->G	-	ENSG00000178605	GTPBP6	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.507353
19	1799652	A->G	-	ENSG00000130270	ATP8B3	protein_coding	Intron	stop_lost	p.Ter->Trp	Alu	0.133333
19	1992001	A->G	-	ENSG00000133243	BTBD2	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.230769
19	1992002	A->G	-	ENSG00000133243	BTBD2	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.153846
X	2221159	A->G	-	ENSG00000169084	DHRSX	protein_coding	CDS	missense_variant	p.His->Arg	Alu	1
X	2392472	A->G	-	ENSG00000169084	DHRSX	protein_coding	CDS	splice_region_variant	.	Alu	0.111111
1	2520749	A->G	-	ENSG00000157881	PANK4	protein_coding	exon	missense_variant	p.Ile->Val	Alu	0.526316
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.202128
19	2939366	A->G	-	ENSG00000175691	ZNF77	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.157895
20	5111526	A->G	-	ENSG00000089063	TMEM230	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.181818
17	5418061	A->G	-	ENSG00000108559	NUP88	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.115385
12	6826812	A->G	+	ENSG00000250510	GPR162	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	1
12	6856030	A->G	+	ENSG00000111667	USP5	protein_coding	CDS	synonymous_variant	p.Gly->Gly	Alu	0.490066
19	10180190	A->G	-	ENSG00000130816	DNMT1	protein_coding	exon	missense_variant	p.Arg->Gly	Alu	0.0333333
12	11034879	A->G	-	ENSG00000231887	PRH1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.1875
16	15882974	A->G	-	ENSG00000133393	FOPNL	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.142857
10	17318709	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.0533333
10	17318710	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.618421
10	17318712	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.0666667
10	17318717	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.39726
10	17318718	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.458333
10	17318725	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.0704225
20	17659159	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0996441
20	17659189	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0809969
20	17659219	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0991379
16	18868647	A->G	-	ENSG00000157106	SMG1	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	1
16	18896930	A->G	-	ENSG00000157106	SMG1	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.344828
19	19177445	A->G	-	ENSG00000064489	BORCS8-MEF2B	protein_coding	exon	synonymous_variant	p.Pro->Pro	Alu	0.0869565
1	19600802	A->G	+	ENSG00000173436	MINOS1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.1875
1	19600844	A->G	+	ENSG00000173436	MINOS1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.133333
19	19786831	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	missense_variant	p.Ile->Val	Alu	0.3
19	19791700	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	non_coding_transcript_exon_variant	.	Alu	0.125
19	19791705	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	non_coding_transcript_exon_variant	.	Alu	0.153846
19	19792444	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	exon	non_coding_transcript_exon_variant	.	Alu	0.384615
13	20855758	A->G	-	ENSG00000132953	XPO4	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.0517241
19	21098817	A->G	+	ENSG00000160352	ZNF714	protein_coding	CDS	missense_variant&splice_region_variant	p.Ile->Val	Alu	0.0727273
19	21125141	A->G	+	ENSG00000160352	ZNF714	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.166667
22	22322827	A->G	+	ENSG00000211644	IGLV1-51	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.35
22	22432204	A->G	+	ENSG00000211655	IGLV1-36	IG_V_gene	CDS	missense_variant	p.Glu->Gly	Alu	0.461538
22	22668545	A->G	+	ENSG00000211658	IGLV3-27	IG_V_gene	CDS	synonymous_variant	p.Pro->Pro	Alu	0.24
22	22687228	A->G	+	ENSG00000211659	IGLV3-25	IG_V_gene	CDS	synonymous_variant	p.Ala->Ala	Alu	0.214286
22	22721067	A->G	+	ENSG00000211663	IGLV3-19	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.181818
22	22812077	A->G	+	ENSG00000211669	IGLV3-10	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.2
22	22881309	A->G	+	ENSG00000211673	IGLV3-1	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.283333
18	26081293	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.190476
18	26081302	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0869565
18	26081328	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.294118
12	27030182	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.117647
12	27030183	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.111111
12	27030188	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.111111
6	31271074	A->G	-	ENSG00000204525	HLA-C	protein_coding	exon	splice_region_variant&synonymous_variant	p.Ala->Ala	Alu	1
3	32566655	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.363636
3	32566656	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.181818
6	33308131	A->G	-	ENSG00000231925	TAPBP	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.384615
6	35904925	A->G	-	ENSG00000096063	SRPK1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.115385
9	37510300	A->G	+	.	.	.	Intergenic	downstream_gene_variant	.	Alu	0.428571
17	37639548	A->G	-	ENSG00000278053	DDX52	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.230769
7	39950991	A->G	+	ENSG00000065883	CDK13	protein_coding	exon	missense_variant	p.Lys->Arg	Alu	0.0517241
13	40951653	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0833333
13	40951694	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.25
13	40951697	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0833333
13	40951700	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.208333
13	45516236	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.113208
12	48923107	A->G	-	ENSG00000272822	AC073610.3	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.125
3	49360949	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.2
3	49360951	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.3
3	49360961	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.2
3	49360997	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.181818
10	49932105	A->G	-	ENSG00000227345	PARG	protein_coding	exon	missense_variant	p.Ile->Val	Alu	0.269663
10	49932223	A->G	-	ENSG00000227345	PARG	protein_coding	exon	synonymous_variant	p.Pro->Pro	Alu	0.111111
10	49935104	A->G	-	ENSG00000227345	PARG	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.230769
1	51356735	A->G	-	ENSG00000085832	EPS15	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.73913
15	51806459	A->G	+	ENSG00000128872	TMOD2	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.666667
3	52749713	A->G	-	ENSG00000114904	NEK4	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.0444444
3	52749715	A->G	-	ENSG00000114904	NEK4	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.0454545
12	53013922	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	downstream_gene_variant	.	Alu	0.181818
12	53296435	A->G	+	ENSG00000123349	PFDN5	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.346154
X	53534126	A->G	-	ENSG00000086758	HUWE1	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	1
2	54051047	A->G	+	ENSG00000170634	ACYP2	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.136364
19	54596482	A->G	+	ENSG00000104974	LILRA1	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.477273
7	56078974	A->G	+	ENSG00000129103	SUMF2	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.130435
7	56078976	A->G	+	ENSG00000129103	SUMF2	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.0833333
7	56079014	A->G	+	ENSG00000129103	SUMF2	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.333333
6	57046776	A->G	+	ENSG00000168116	KIAA1586	protein_coding	CDS	splice_region_variant&synonymous_variant	p.Glu->Glu	Alu	0.75
4	57110068	A->G	-	ENSG00000163453	IGFBP7	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0609756
11	61438300	A->G	+	ENSG00000167985	SDHAF2	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.166667
17	64350416	A->G	-	ENSG00000261371	PECAM1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	1
12	68766684	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.142857
12	68766685	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.357143
12	68766688	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.2
12	68766702	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.416667
12	68766703	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.727273
12	68766724	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.25
12	68766820	A->G	+	ENSG00000175782	SLC35E3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.277778
12	68815711	A->G	+	ENSG00000135679	MDM2	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.0555556
4	71028652	A->G	+	ENSG00000156136	DCK	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.142857
10	72715198	A->G	+	ENSG00000156026	MCU	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.166667
14	73491067	A->G	+	ENSG00000170468	RIOX1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	1
2	73732626	A->G	-	ENSG00000144034	TPRKB	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.0869565
16	74299614	A->G	+	ENSG00000103035	PSMD7	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.272727
16	75598295	A->G	-	ENSG00000259992	AC025287.1	processed_transcript	CDS	synonymous_variant	p.Ser->Ser	Alu	0.0833333
18	79949602	A->G	-	ENSG00000122490	PQLC1	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.0638298
17	81563972	A->G	-	ENSG00000182446	NPLOC4	protein_coding	exon	synonymous_variant	p.Arg->Arg	Alu	0.166667
12	82857072	A->G	+	ENSG00000179104	TMTC2	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.481481
16	88033197	A->G	+	ENSG00000172530	BANP	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	0.315789
2	88885951	A->G	+	ENSG00000211598	IGKV4-1	IG_V_gene	CDS	missense_variant	p.Asn->Ser	Alu	0.0724638
2	88885984	A->G	+	ENSG00000211598	IGKV4-1	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0714286
6	88904727	A->G	-	ENSG00000111880	RNGTT	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.366197
2	88947421	A->G	-	ENSG00000243466	IGKV1-5	IG_V_gene	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0571429
2	89027679	A->G	-	ENSG00000241351	IGKV3-11	IG_V_gene	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0638298
2	89085346	A->G	-	ENSG00000244437	IGKV3-15	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.157895
2	89142771	A->G	-	ENSG00000239951	IGKV3-20	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.06
2	89947964	A->G	+	ENSG00000243264	IGKV2D-29	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.115385
10	90902317	A->G	+	ENSG00000148688	RPP30	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.0625
10	90902318	A->G	+	ENSG00000148688	RPP30	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0625
10	94607911	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	splice_region_variant&synonymous_variant	p.Leu->Leu	Alu	0.487179
10	94607913	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	missense_variant	p.Glu->Gly	Alu	0.0769231
10	94607917	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	synonymous_variant	p.Thr->Thr	Alu	0.307692
10	94607959	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	synonymous_variant	p.Ser->Ser	Alu	0.117647
10	94607972	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	missense_variant	p.Thr->Ala	Alu	0.20339
10	94607987	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	CDS	missense_variant	p.Ser->Gly	Alu	0.132353
12	95482133	A->G	+	ENSG00000111142	METAP2	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.294118
2	95899186	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.218182
2	95899211	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.295082
2	96628604	A->G	-	ENSG00000114982	KANSL3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.363636
2	97219192	A->G	+	ENSG00000135976	ANKRD36	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.137931
7	99493532	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	synonymous_variant	p.Leu->Leu	Alu	0.03125
8	102829408	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0742188
14	105625360	A->G	-	ENSG00000211892	IGHG4	IG_C_gene	CDS	synonymous_variant	p.Pro->Pro	Alu	0.22541
14	105940032	A->G	-	ENSG00000211933	IGHV6-1	IG_V_gene	CDS	synonymous_variant	p.Pro->Pro	Alu	0.1
14	106005523	A->G	-	ENSG00000211935	IGHV1-3	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.0909091
14	106038165	A->G	-	ENSG00000211937	IGHV2-5	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0540541
14	106038189	A->G	-	ENSG00000211937	IGHV2-5	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0970874
14	106062275	A->G	-	ENSG00000211938	IGHV3-7	IG_V_gene	CDS	missense_variant	p.Glu->Gly	Alu	0.307692
14	106185193	A->G	-	ENSG00000211945	IGHV1-18	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.0506329
14	106301658	A->G	-	ENSG00000211951	IGHV2-26	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.25
14	106335202	A->G	-	ENSG00000270550	IGHV3-30	IG_V_gene	CDS	synonymous_variant	p.Lys->Lys	Alu	0.136364
14	106335203	A->G	-	ENSG00000270550	IGHV3-30	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.227273
14	106373804	A->G	-	ENSG00000211956	IGHV4-34	IG_V_gene	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0714286
14	106470559	A->G	-	ENSG00000232216	IGHV3-43	IG_V_gene	CDS	missense_variant	p.Glu->Gly	Alu	0.416667
14	106511376	A->G	-	ENSG00000211962	IGHV1-46	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0806452
14	106537946	A->G	-	ENSG00000211964	IGHV3-48	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.25
14	106538224	A->G	-	ENSG00000211964	IGHV3-48	IG_V_gene	CDS	synonymous_variant	p.Leu->Leu	Alu	0.0652174
14	106578887	A->G	-	ENSG00000211966	IGHV5-51	IG_V_gene	CDS	missense_variant	p.Ile->Val	Alu	0.1
2	108471576	A->G	+	ENSG00000135968	GCC2	protein_coding	exon	synonymous_variant	p.Gln->Gln	Alu	0.413043
4	109449442	A->G	+	ENSG00000138802	SEC24B	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.181818
11	112228656	A->G	+	ENSG00000150787	PTS	protein_coding	exon	missense_variant	p.His->Arg	Alu	0.321429
10	124762422	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	synonymous_variant	p.Leu->Leu	Alu	0.0714286
10	124762463	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.0833333
10	124762529	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.05
7	128502637	A->G	+	ENSG00000165055	METTL2B	protein_coding	exon	synonymous_variant	p.Thr->Thr	Alu	0.0666667
7	128502689	A->G	+	ENSG00000165055	METTL2B	protein_coding	exon	missense_variant	p.Arg->Gly	Alu	0.147059
10	131911600	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	1
5	133019189	A->G	-	ENSG00000155329	ZCCHC10	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.125
10	133300492	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.25
2	135747721	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.111111
2	135747738	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.1
5	138393219	A->G	+	ENSG00000120733	KDM3B	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.518797
7	140475283	A->G	-	ENSG00000133606	MKRN1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.384615
7	140475299	A->G	-	ENSG00000133606	MKRN1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
5	144169846	A->G	-	ENSG00000145817	YIPF5	protein_coding	Intergenic	missense_variant&splice_region_variant	p.Lys->Arg	Alu	0.0909091
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	exon	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0378378
4	189952224	A->G	+	ENSG00000109536	FRG1	protein_coding	exon	missense_variant	p.Lys->Glu	Alu	0.354839
4	189952251	A->G	+	ENSG00000109536	FRG1	protein_coding	exon	missense_variant	p.Asn->Asp	Alu	0.3
4	189957425	A->G	+	ENSG00000109536	FRG1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.673469
3	196060604	A->G	-	ENSG00000072274	TFRC	protein_coding	Intron	non_coding_transcript_exon_variant	.	Alu	0.0606061
2	200885271	A->G	-	ENSG00000240344	PPIL3	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.111111
2	200885288	A->G	-	ENSG00000240344	PPIL3	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.105263
2	200885335	A->G	-	ENSG00000240344	PPIL3	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.2
2	218574069	A->G	+	ENSG00000144580	CNOT9	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.166667
1	220057912	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	stop_lost	p.Ter->Trp	Alu	0.0882353
1	225786879	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.22
1	225786912	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.375
1	225786943	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0638298
19	57864892	A->G	+	ENSG00000204514	ZNF814	protein_coding	exon	.	.	Alu	0.142857
19	2291931	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.0869565
19	2291978	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.380952
19	2292003	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.125
19	2292005	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.352941
19	3540017	A->G	-	ENSG00000183397	C19orf71	protein_coding	five_prime_utr	.	.	Alu	0.5625
19	3540034	A->G	-	ENSG00000183397	C19orf71	protein_coding	five_prime_utr	.	.	Alu	0.25
19	6379035	A->G	-	ENSG00000125650	PSPN	protein_coding	five_prime_utr	.	.	Alu	0.153846
10	16437386	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.351351
6	26172460	A->G	+	ENSG00000274290	HIST1H2BE	protein_coding	five_prime_utr	.	.	Alu	0.176471
19	37324798	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.615385
19	37324855	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.111111
19	44662395	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.15
3	49086999	A->G	-	ENSG00000198218	QRICH1	protein_coding	five_prime_utr	.	.	Alu	0.285714
20	49179160	A->G	-	ENSG00000124214	STAU1	protein_coding	five_prime_utr	.	.	Alu	0.125
2	55266443	A->G	-	ENSG00000085760	MTIF2	protein_coding	five_prime_utr	.	.	Alu	0.181818
12	56731526	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.190476
12	56731532	A->G	-	ENSG00000196531	NACA	protein_coding	five_prime_utr	.	.	Alu	0.08
16	58624715	A->G	-	ENSG00000125107	CNOT1	protein_coding	five_prime_utr	.	.	Alu	0.0508475
7	66740100	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.131579
7	66740101	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.0540541
10	72220075	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.111111
10	72220101	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.09375
10	72220110	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0540541
10	72220134	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0851064
10	72220165	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0925926
10	72220174	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0943396
10	72220179	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.037037
10	72220182	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0784314
10	72220186	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0350877
10	72220209	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.057971
10	72220232	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.025
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.408451
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.308824
16	74664627	A->G	-	ENSG00000168411	RFWD3	protein_coding	five_prime_utr	.	.	Alu	0.117647
16	74664637	A->G	-	ENSG00000168411	RFWD3	protein_coding	five_prime_utr	.	.	Alu	0.1
14	92118862	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.166667
14	92118891	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.166667
14	92118922	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.333333
8	94975947	A->G	+	ENSG00000156170	NDUFAF6	protein_coding	five_prime_utr	.	.	Alu	0.117647
8	143590731	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.307692
3	179325122	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0483871
3	179325235	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.138889
3	179325255	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0294118
1	179877296	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	five_prime_utr	.	.	Alu	0.0254777
4	126965	A->G	+	ENSG00000250312	ZNF718	protein_coding	Intergenic	.	.	Alu	0.181818
X	303972	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
X	303982	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	303986	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
X	304012	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
X	304042	A->G	-	.	.	.	Intergenic	.	.	Alu	0.535714
X	304058	A->G	-	.	.	.	Intergenic	.	.	Alu	0.46875
X	304085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.28125
X	304088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.485714
17	398690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	398938	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	399238	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
17	399241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
17	399588	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	399613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
17	399619	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	399662	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
17	399687	A->G	-	.	.	.	Intergenic	.	.	Alu	0.846154
16	588486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
19	845183	A->G	+	ENSG00000196415	PRTN3	protein_coding	Intergenic	.	.	Alu	0.125
19	845200	A->G	+	ENSG00000196415	PRTN3	protein_coding	Intergenic	.	.	Alu	0.133333
19	845329	A->G	+	ENSG00000196415	PRTN3	protein_coding	Intergenic	.	.	Alu	0.153846
X	1381346	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.384615
X	1381683	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.3125
X	1382959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	1383097	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
X	1383120	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	1383123	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1383181	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1383188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1383189	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1383214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
X	1383237	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
X	1383277	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	1383283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	1383415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1383431	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0392157
X	1383434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.122449
X	1383460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.152174
X	1383461	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0454545
X	1383483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
X	1383515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0444444
X	1383524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383528	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
X	1383540	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0465116
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.275
X	1383593	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
X	1383794	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	1383849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	1383870	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
X	1383919	A->G	-	.	.	.	Intergenic	.	.	Alu	0.137931
X	1383929	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383983	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1383993	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1384038	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	1384085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	1384128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
X	1384147	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0487805
X	1384402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	1384977	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
X	1384983	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0333333
X	1385005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1385022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0545455
X	1385081	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
X	1385087	A->G	-	.	.	.	Intergenic	.	.	Alu	0.368421
X	1385122	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
X	1385132	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
X	1385136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
X	1385157	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
X	1385158	A->G	-	.	.	.	Intergenic	.	.	Alu	0.423077
X	1385161	A->G	-	.	.	.	Intergenic	.	.	Alu	0.208333
X	1385162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
X	1385168	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
17	1388022	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.181818
19	1459301	A->G	-	ENSG00000115266	APC2	protein_coding	Intergenic	.	.	Alu	0.176471
19	1586574	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.272727
19	1587614	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.5
19	1589570	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.3
19	1590051	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.133333
19	1590063	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.125
1	1881506	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.26087
1	1881672	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.230769
1	1884076	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.105263
1	1886190	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1886300	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.25
1	1886304	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1886312	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.117647
11	1909593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
11	1909595	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
16	2260332	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.2
16	2260333	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.3
19	2292026	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2292291	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.15
19	2292300	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.136364
19	2292318	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.25
19	2292323	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.136364
19	2292750	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	2292752	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.142857
19	2293104	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	2293145	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.195122
19	2293194	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0810811
19	2293195	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0555556
19	2293204	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.138889
19	2293206	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.512821
19	2293892	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	2293900	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	2293902	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	2293906	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.4
19	2293942	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.548387
19	2293948	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.333333
19	2293976	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.125
19	2294034	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0731707
19	2294036	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0731707
19	2295616	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.142857
4	2540924	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.133333
X	2707251	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.142857
X	2717269	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.181818
X	2725141	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.272727
X	2725318	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.217391
X	2725323	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.304348
X	2735947	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2739589	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.153846
X	2739591	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.583333
X	2744183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	2744184	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
X	2744186	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
X	2744192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
X	2744198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0655738
X	2744201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.140625
X	2744215	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
X	2744227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	2744255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0985915
X	2744263	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
X	2744277	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0701754
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
X	2744287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.113208
X	2744736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2744737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	2744804	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2745761	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	2745779	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
Y	2937336	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.147059
Y	2949770	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.235294
9	3501629	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.2
9	3501653	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.461538
9	3501654	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.538462
9	3501694	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.117647
9	3501751	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.307692
9	3501752	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.153846
9	3501761	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.2
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0967742
2	3541931	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0666667
2	3541935	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.09375
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	3543851	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0714286
11	3698458	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.214286
11	3698462	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.384615
11	3698471	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.428571
11	3698474	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.214286
11	3698483	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.571429
20	3985338	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.333333
20	4003242	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
6	4036411	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.5
6	4036442	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.181818
16	4849727	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.2
3	5127752	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.111111
3	5127823	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.133333
3	5128114	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.166667
3	5133746	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.105263
7	5326574	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
17	5487171	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5563164	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5601569	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	6000095	A->G	+	ENSG00000278719	MCM8-AS1	antisense	Intergenic	.	.	Alu	0.363636
19	6084702	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.181818
19	6379126	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	6379150	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
7	6397779	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.272727
9	6441188	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.3
6	7173700	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.166667
7	7635935	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	7923493	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.3
12	7923842	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.368421
20	8141369	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
18	8616913	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.2
11	9239661	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.272727
2	9506593	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.125
2	9507774	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.214286
2	9507851	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.5
2	9507877	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.272727
2	9507991	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9513100	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.133333
2	9513135	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.266667
2	9523990	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.214286
2	9523999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9532537	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.111111
2	9532539	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.105263
2	9532548	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.136364
2	9532561	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.190476
4	9538672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
1	9560065	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.166667
1	9564845	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.08
2	9618605	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.428571
2	9618617	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.416667
1	9927378	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0961538
1	9927385	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0465116
1	9927390	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.116279
1	9927412	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.222222
1	9927422	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0606061
1	9927466	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.152174
1	9927515	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.115385
1	9927518	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0545455
1	9927573	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0769231
1	9927874	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.571429
1	9927891	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.115385
1	9927893	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.428571
1	9927894	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.296296
1	9927902	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0666667
1	9927907	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.228571
1	9927932	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0714286
1	9927962	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0652174
1	9928049	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0481928
1	9928055	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0246914
1	9928072	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.028169
1	9928080	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0533333
1	9928089	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.390625
1	9928110	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.211538
1	9928132	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.555556
1	9928190	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9928191	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9928274	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.230769
1	9928632	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.15
1	9928633	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.280488
1	9928634	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.180723
1	9928660	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0365854
1	9928691	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.138889
1	9928702	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0487805
1	9928708	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.116279
1	9928754	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0833333
1	9928764	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.136364
1	9928768	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.177778
1	9928776	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.122449
1	9928791	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0681818
1	9928793	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.238095
1	9928819	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0588235
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.323529
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10152281	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0491803
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.20339
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0757576
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0958904
3	10152557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.661765
3	10152573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0285714
3	10152587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0405405
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.298701
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.289855
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.261538
3	10152634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
3	10152658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
3	10152659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.046875
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	10152689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.216216
3	10152733	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10152737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.185185
3	10152742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.368421
3	10152751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.315789
3	10152752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
3	10152764	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
3	10152888	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.191489
3	10152910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
3	10152933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0638298
3	10152941	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10152944	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
3	10152957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.216216
3	10152965	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
3	10152967	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
3	10153069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.138889
3	10153148	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10153167	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0350877
3	10153198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.197183
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0985915
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.247059
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0804598
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0277778
3	10153266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0294118
3	10153298	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0405405
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
3	10153349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0344828
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.224719
3	10153379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.045977
3	10153381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.378788
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.108108
5	10368369	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
5	10368371	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.538462
5	10368375	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.333333
5	10368377	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.125
5	10368423	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.238095
5	10368673	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.368421
5	10368679	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.1
5	10368782	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.136364
5	10368793	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.136364
5	10368795	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.0909091
5	10368844	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.111111
5	10759837	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.176471
5	10759840	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.25
5	10759893	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.125
19	10930619	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.136364
19	10932938	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.666667
19	10933063	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.235294
19	10933092	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.157895
19	10933125	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.125
19	11449999	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.0344828
19	11450009	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.269231
19	11450010	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.254902
19	11450020	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.0681818
19	11450051	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.466667
19	11450286	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.15
19	11450287	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.45
19	11450323	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.111111
19	11450324	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.25
19	11450325	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.111111
19	11450327	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.12
19	11450330	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.08
19	11450346	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.238095
19	11450356	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.533333
19	11450371	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.162162
19	11450380	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.194444
19	11450386	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.147059
19	11450392	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.305556
19	11450398	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.1
19	11450402	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.116279
19	11450409	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.888889
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.311475
19	11450427	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.05
19	11450429	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.0333333
12	11658375	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.15
12	11660452	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.181818
12	11660519	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11734431	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11824707	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.272727
12	11845097	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.230769
11	11860000	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.25
19	11991918	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.117647
18	12031272	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.181818
18	12031407	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.3
18	12031424	A->G	+	ENSG00000267480	AP001542.3	antisense	Intergenic	.	.	Alu	0.5
19	12289773	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.333333
19	12289796	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.1875
19	12941191	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0547945
19	12941194	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.025974
19	12941216	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.075
19	12941352	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.057971
6	13650856	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.166667
6	13650869	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.166667
1	13755996	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.5
1	13755997	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.4
19	13837503	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0454545
19	13837884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0517241
19	13837902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
19	13837925	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0731707
19	13837926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0731707
19	13838120	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0245902
19	13838162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0757576
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.155039
19	13838188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0648148
19	13838291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
19	13838300	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0277778
19	13838304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0253165
19	13838380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.347826
19	13838384	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0322581
19	13838386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0724638
6	14121360	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.5
6	14121438	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.190476
6	14121439	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14390485	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
19	14398568	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0740741
19	14399664	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.16
19	14414453	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.625
19	14414480	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.181818
19	14414492	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.416667
19	14414503	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.272727
19	14414512	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.2
19	14414551	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.363636
19	14414571	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.636364
19	14414754	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.2
19	14414842	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.5
19	14414844	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.5
19	14414845	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.727273
19	14414884	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.25
10	14906966	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.0833333
10	14907007	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.130435
6	15254853	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.190476
6	15254854	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.363636
6	15254922	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
3	15410395	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.307692
3	15410396	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.230769
3	15410753	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.526316
3	15410783	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.45
3	15410786	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.25
3	15410787	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.35
16	15700515	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.05
16	15700516	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.1
16	15700607	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.285714
16	15700630	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15700685	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.190476
16	15700686	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.3
16	15701100	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.4
16	15701117	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.0909091
16	15701178	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.615385
16	15701182	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.428571
16	15701186	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.8
16	15701187	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.642857
3	15741077	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.4
3	15741087	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.3
16	15953288	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
19	16080601	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0625
19	16080625	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16080627	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0740741
19	16080628	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.185185
19	16080691	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16080692	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.24
19	16080741	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.115385
19	16082839	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16082907	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0909091
19	16083257	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16083258	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.130435
19	16083268	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1
19	16083324	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.157895
19	16083425	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.129032
19	16083428	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0625
19	16084068	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16084109	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.157895
19	16085208	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.4
19	16085318	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.103448
1	16229075	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	16383008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	16383052	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
17	16383055	A->G	+	.	.	.	Intergenic	.	.	Alu	0.227273
17	16383069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	16383879	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	16383882	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
17	16383909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.225806
19	16636734	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16636741	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.5
19	16636797	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.25
19	16636891	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16636896	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.428571
19	16637271	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16637272	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.230769
19	16637391	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.157895
19	16637422	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.130435
19	16637423	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.26087
19	16637429	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.173913
19	16637449	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.1
19	16638181	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16638185	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.769231
19	16638229	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16642409	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16642493	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.176471
19	16643499	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.352941
19	16643551	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16644575	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.153846
11	16740489	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.133333
11	16740502	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.176471
11	16740573	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.105263
11	16740578	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.45
11	16740696	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.230769
11	16756395	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.148148
11	16756396	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.103448
11	16756409	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.115385
11	16756436	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.257143
11	16756451	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.25
11	16756476	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.694444
11	16756530	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.129032
11	16756531	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.580645
11	16756647	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.363636
11	16756654	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0465116
11	16756699	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0408163
11	16756722	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.585366
11	16756723	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.731707
11	17076686	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.130435
11	17334622	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.111111
11	17334628	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17334779	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.1
11	17334780	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.272727
11	17334798	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.139535
11	17334806	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.135135
11	17334846	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.307692
11	17334873	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.233333
11	17334874	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17335682	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.15
11	17335685	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.5
11	17335761	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.12
11	17335762	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.28
11	17336084	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0576923
11	17336100	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.210526
11	17336104	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.244444
11	17336108	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0909091
11	17336123	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.18
11	17336126	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.461538
11	17336128	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.05
11	17336132	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0571429
11	17336163	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0909091
11	17336165	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0535714
11	17336171	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.181818
11	17336172	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0892857
11	17336178	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.270833
11	17336190	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.263158
11	17336205	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0731707
11	17336500	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.125
11	17336633	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.222222
11	17336994	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.1
11	17337040	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0972222
11	17337041	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0694444
11	17337045	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.264706
11	17337068	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0666667
11	17337070	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.126984
11	17337082	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.537313
11	17337113	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0238095
11	17337124	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17337126	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.173333
11	17337175	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0243902
11	17337176	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0344828
11	17337180	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0215054
11	17337193	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.123288
11	17337666	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.307692
11	17337674	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.264706
11	17337692	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.169811
11	17337733	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0375
11	17337759	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0722892
11	17337768	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0365854
11	17337773	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0666667
11	17337807	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	17337887	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.047619
11	17337897	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0263158
11	17345453	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0740741
10	17448688	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0952381
10	17448705	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.176471
6	17645432	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.363636
10	17687219	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.764706
10	17687220	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.625
10	17687336	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.333333
10	17687354	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.166667
10	17687378	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.826087
10	17687404	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.08
17	18271812	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.121212
17	18271818	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.296296
17	18271837	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.37931
17	18271858	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.08
17	18271859	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.304348
17	18271860	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.782609
17	18271896	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.3
17	18271897	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.5
17	18272695	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.2
17	18272714	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.238095
17	18272753	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.590909
17	18272776	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.272727
17	18272820	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.25
17	18273721	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.111111
19	18276129	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
19	18276166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
11	18406168	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.0666667
19	18914502	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.272727
19	18914849	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.181818
1	19301920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	19301926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	19374698	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
9	19374699	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
9	19375077	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	19375107	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
9	19375252	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	19598513	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.125
22	20067678	A->G	+	ENSG00000236540	AC006547.1	antisense	Intergenic	.	.	Alu	0.3
X	20138374	A->G	-	ENSG00000173674	EIF1AX	protein_coding	Intergenic	.	.	Alu	0.166667
19	20227294	A->G	-	ENSG00000267383	AC011447.3	antisense	Intergenic	.	.	Alu	0.3
2	20292875	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.176471
2	20292880	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20345135	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.266667
2	20345192	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.285714
6	20551950	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.2
6	20551981	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.636364
6	20552189	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.181818
6	20552228	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.454545
1	20647915	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.333333
1	20647924	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.133333
1	20648033	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.3
1	20648034	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.3
16	20705318	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.2
1	20755311	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.105263
1	20755324	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.130435
1	20755333	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.1
1	20755465	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.3
1	20755466	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.3
1	20755544	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20755569	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.222222
1	20756758	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.36
1	20756783	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.291667
1	20756812	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	20756818	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	20756844	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.105263
1	20756847	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.421053
19	21315948	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.272727
13	21441459	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.3
13	21442630	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.153846
13	21442643	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.133333
16	21518154	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.08
19	21538506	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.166667
19	21539522	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.157895
19	21539551	A->G	+	ENSG00000197013	ZNF429	protein_coding	Intergenic	.	.	Alu	0.266667
10	21968608	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.526316
10	21968649	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.571429
10	21986797	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.15
14	22916154	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.166667
14	22916354	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.388889
14	22916377	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.111111
14	22916408	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.533333
8	23062493	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.230769
14	23074048	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.5
14	23096297	A->G	+	ENSG00000179933	C14orf119	protein_coding	Intergenic	.	.	Alu	0.142857
1	23152758	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.125
1	23154783	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.2
8	23187501	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
1	23333944	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.111111
1	23334024	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.384615
1	23334052	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.133333
7	23516006	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.2
7	23518963	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.12
3	23832959	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23848308	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
19	24055349	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.375
19	24055396	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.333333
19	24061882	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.25
22	24573003	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0714286
22	24573021	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.678571
22	24573052	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0967742
22	24573054	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0689655
22	24573057	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.5
22	24573058	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.08
22	24573093	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.205882
22	24573096	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.216216
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0701754
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.25
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.125
22	24573192	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0416667
22	24573655	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.105263
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.146667
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.275
22	24573702	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0461538
22	24573720	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0434783
22	24573723	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0285714
22	24573724	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0273973
22	24573725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0277778
22	24573726	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0833333
22	24573734	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0447761
22	24573787	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0769231
22	24573798	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0434783
22	24573814	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.319149
22	24573832	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.211538
22	24573833	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.132075
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.161765
22	24574602	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0344828
22	24574608	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0555556
22	24574615	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.109091
22	24574620	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0377358
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.811321
22	24574646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0491803
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.171875
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.314815
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.368421
22	24574677	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.037037
22	24574678	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0925926
22	24574681	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0980392
22	24574691	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0357143
22	24574694	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0526316
22	24574703	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.140625
22	24574707	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.289855
22	24574708	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.057971
22	24574727	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0333333
22	24574731	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0344828
22	24574742	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.228571
22	24574751	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0352941
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.458824
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0900901
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0446429
22	24576351	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.142857
4	25279275	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
4	25279838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
4	25279889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
4	25279905	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
15	25433358	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.157895
18	26169177	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.363636
18	26169183	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.142857
18	26169195	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.4
18	26169219	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.230769
18	26169240	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.333333
18	26169241	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.333333
18	26169249	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.2
18	26169643	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.866667
18	26169674	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.0952381
18	26169683	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.0869565
18	26169736	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.263158
10	26444843	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.2
10	26853747	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26853821	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.166667
12	27035169	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.230769
10	27125805	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.181818
13	27652607	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.185185
13	27652616	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.08
13	27652621	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.2
13	27652651	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.125
13	27652708	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.25
13	27653168	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.578947
13	28006832	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28020573	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.190476
13	28020619	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.0555556
13	28020627	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28028512	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.428571
13	28028614	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.176471
13	28028855	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28028867	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28028874	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.384615
13	28028879	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28028920	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.3
13	28028946	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.157895
13	28028995	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28029000	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.15
13	28029049	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28029228	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28029268	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	1
13	28029270	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28146767	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.130435
13	28146854	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.115385
13	28146867	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28146887	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.08
13	28146895	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28146896	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28146965	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28146969	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28156768	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28156927	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28188543	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.25
13	28189461	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28189471	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.428571
13	28189525	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28193688	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28198230	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.454545
13	28198231	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
10	28525595	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.25
10	28525686	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.5
10	28525726	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.541667
10	28525729	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.26087
10	28525763	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.588235
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.25
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.266667
10	28538497	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.142857
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.117647
1	28649514	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	28721991	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.3
17	28722034	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.3
17	28722058	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.285714
17	28722100	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.117647
17	28722308	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.15
17	28722320	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.166667
17	28722353	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.133333
17	28722397	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.166667
2	28784814	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.12
2	28786170	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.136364
2	28786188	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0666667
2	28786214	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0740741
2	28786217	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28786584	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28786654	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28788932	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.238095
2	28788938	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.08
2	28792485	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0714286
22	28797530	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.08
22	28797564	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.047619
22	28797618	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0689655
22	28798401	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.230769
22	28798405	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.125
22	28798551	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.111111
16	28831469	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.125
16	28831473	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0689655
22	29198224	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
22	29198286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
22	29199040	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
17	29275115	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	30897780	A->G	+	ENSG00000172171	TEFM	protein_coding	Intergenic	.	.	Alu	0.266667
1	30948052	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31039644	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
16	31121852	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0645161
16	31121881	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.125
16	31121913	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0731707
16	31121965	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.047619
16	31122003	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.170732
16	31122013	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0444444
16	31122624	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.458333
16	31122625	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.347826
16	31122646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.136364
16	31122694	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.179487
16	31122707	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0833333
16	31122719	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0625
16	31122723	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0571429
16	31122734	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0555556
16	31122754	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0625
16	31122760	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.666667
16	31122766	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.210526
16	31122770	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0666667
16	31122802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.625
16	31122861	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.133333
16	31122867	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.214286
16	31122926	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.105263
16	31122927	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1
16	31122966	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.4
16	31122967	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.142857
16	31122996	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0909091
16	31123004	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0833333
16	31123007	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0952381
16	31123021	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0909091
16	31123024	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0952381
16	31123032	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1
16	31123036	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1875
16	31123103	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.272727
16	31123108	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31123132	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31123286	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.344828
16	31123310	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.15
16	31123317	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.121951
16	31123342	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0714286
16	31123343	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.117647
16	31123356	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31123382	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.368421
16	31123383	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.307692
16	31123391	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0555556
16	31123400	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0769231
16	31123406	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.12
16	31123443	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.173913
16	31123469	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.166667
16	31123470	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.611111
16	31123471	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.722222
16	31123483	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.222222
16	31123526	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0952381
16	31123530	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.681818
16	31123560	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.307692
16	31123607	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.125
16	31123632	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.111111
16	31123641	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.421053
16	31123646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.333333
14	31137664	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.363636
14	31137688	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.8
16	31451207	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.142857
16	31451215	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.153846
16	31451372	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.181818
16	31452279	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.3
16	31453268	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.2
16	31456272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
16	31456318	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
18	32120975	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.2
5	32152682	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0714286
5	32152700	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.111111
5	32156268	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.105263
5	32156281	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.115385
5	32164601	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.157895
5	32164996	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.133333
5	32164997	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.25
5	32165048	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.272727
5	32165064	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0909091
5	32165093	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.115385
5	32165120	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.411765
5	32165173	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0967742
5	32165181	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.136364
10	32357668	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.3
5	32433007	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.142857
2	32507253	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.272727
2	32507254	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.272727
12	32701845	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.2
9	33027730	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0465116
9	33027771	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0612245
9	33027791	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0727273
9	33027881	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.25
9	33037472	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0425532
9	33037632	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.102041
9	33038085	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0307692
9	33038196	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0571429
11	33074180	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.181818
11	33267625	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	33267635	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.454545
11	33267703	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.384615
11	33267986	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	33268025	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0869565
11	33268033	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33268034	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0769231
11	33268035	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.208333
11	33268091	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	33268117	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.421053
11	33268136	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.470588
11	33268353	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33268516	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	33270760	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	33282563	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.157895
11	33341980	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33342024	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.157895
21	33405973	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.129032
21	33405986	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0714286
3	33547886	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.2
9	34206460	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.12
19	34471422	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	34472008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
14	34538127	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.307692
21	34853905	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.4
21	34853945	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.2
5	34953348	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.388889
17	35076170	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.153846
9	35087468	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	35683576	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.142857
6	35683991	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.266667
6	35684008	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.285714
6	35684010	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.285714
6	35684429	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.125
6	35684459	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.111111
19	35770004	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.133333
19	35770005	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.2
19	35770107	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.285714
19	35770125	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.166667
19	35770266	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.44
19	35770272	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.0714286
19	35770281	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.111111
19	35770300	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.214286
19	35770306	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.642857
19	35770312	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.142857
19	35770614	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.2
19	35770622	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.52381
19	35770623	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.238095
19	35770628	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.0952381
19	35770668	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.857143
18	36024244	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.363636
18	36024249	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	36476878	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.133333
1	36476916	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.1875
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.411765
6	36541926	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.142857
20	36578158	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36578293	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36578328	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36578334	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.214286
20	36578348	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.25
20	36611355	A->G	+	ENSG00000101084	RAB5IF	protein_coding	Intergenic	.	.	Alu	0.65
20	36913891	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.235294
20	36913905	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	36913953	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	36914592	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	37077711	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	37328125	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.272727
19	37328183	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.428571
19	37328229	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.133333
9	37504610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	37504673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
9	37505695	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	37505700	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	37505723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	37507690	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	37510065	A->G	+	ENSG00000234160	AL513165.1	antisense	Intergenic	.	.	Alu	0.210526
9	37510105	A->G	+	ENSG00000234160	AL513165.1	antisense	Intergenic	.	.	Alu	0.111111
9	37510108	A->G	+	ENSG00000234160	AL513165.1	antisense	Intergenic	.	.	Alu	0.235294
9	37510146	A->G	+	ENSG00000234160	AL513165.1	antisense	Intergenic	.	.	Alu	0.307692
4	37618942	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.128205
4	37618952	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0540541
4	37626295	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.272727
17	37634515	A->G	-	ENSG00000278053	DDX52	protein_coding	Intergenic	.	.	Alu	0.7
9	37885590	A->G	-	ENSG00000122696	SLC25A51	protein_coding	Intergenic	.	.	Alu	0.230769
8	37888576	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.114286
8	37893142	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.075
8	37893147	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0930233
8	37893167	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0789474
8	37893171	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.210526
8	37893172	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.324324
8	37893212	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.564103
8	37893213	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.25
8	37893234	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.037037
8	37893269	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.245283
8	37893278	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.222222
8	37893668	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.435484
8	37893695	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.027027
8	37893728	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.318841
8	37893733	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0461538
8	37893738	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.428571
8	38140596	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.3
8	38140946	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.333333
19	38844999	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.142857
2	39052908	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.25
14	39178439	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.296296
14	39178444	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.037037
14	39178453	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.04
14	39178488	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.04
14	39178865	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.103448
3	39409006	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.230769
4	39896574	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.818182
4	39896595	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	40229471	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.214286
1	40377024	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0555556
1	40377031	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	40377052	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	40377053	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.170213
1	40377104	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0566038
1	40377214	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.115385
1	40377229	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.046875
1	40399647	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.08
22	40620262	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.2
13	40997490	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40997664	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	41011681	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.05
13	41011690	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0877193
13	41011694	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0377358
13	41011716	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0655738
20	41041289	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0540541
20	41041297	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0571429
20	41042009	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0555556
15	41424894	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.25
17	42007723	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.3
17	42007750	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.214286
3	42019018	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.25
3	42019072	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.125
12	42359859	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.117647
12	42359898	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.266667
12	42359929	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.1
12	42359931	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.235294
12	42359932	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42359961	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.111111
17	42384652	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.157895
8	42532032	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.461538
8	42532061	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.166667
8	42532106	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.263158
8	42533450	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.65
8	42533468	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.136364
8	42533488	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.15
8	42533494	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.1
8	42533530	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.454545
8	42533533	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.55
8	42533534	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.368421
8	42533832	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.3
8	42533841	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42533859	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.833333
8	42533887	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.266667
8	42534071	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.166667
8	42534105	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.1875
8	42534132	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.133333
8	42534151	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.214286
8	42534196	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.176471
8	42534203	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42534277	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
8	42534295	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.125
21	42846618	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.2
21	42846630	A->G	-	ENSG00000160193	WDR4	protein_coding	Intergenic	.	.	Alu	0.230769
6	42940301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
6	42940304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
6	42941860	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.142857
6	42941899	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0967742
6	42941906	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.09375
6	42941916	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.185185
6	42942320	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0869565
6	42942345	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0789474
6	42942346	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.297297
6	42942350	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0555556
6	42942373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0769231
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.435897
6	42942480	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.736842
6	42942481	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.631579
6	42943140	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0714286
6	42943148	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.172414
6	42943158	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
6	42943183	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.047619
6	42943193	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0606061
6	42943240	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	42943241	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0526316
6	42943351	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0645161
22	43010073	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.166667
22	43010598	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.235294
22	43010648	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	43029649	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.222222
6	43029665	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.05
6	43029674	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.589744
6	43029679	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.368421
6	43029690	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0555556
6	43029700	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.157895
6	43029725	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.628571
6	43029726	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.736842
6	43029755	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.368421
6	43029800	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.37931
6	43029803	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.137931
6	43029809	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.785714
6	43029820	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1
6	43029840	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.707317
6	43029841	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.05
6	43029855	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.325
6	43029872	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.275
6	43029881	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.097561
6	43029882	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.097561
6	43030457	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.5
6	43030476	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.133333
6	43030496	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.3125
6	43030757	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.363636
6	43031223	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.285714
5	43046259	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.153846
5	43070028	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.181818
5	43128775	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43129038	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.357143
5	43129074	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.333333
5	43129101	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.1875
5	43129188	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.105263
5	43129197	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.142857
5	43129198	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.190476
5	43129340	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.157895
10	43141124	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.153846
10	43141467	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.117647
17	43226120	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.333333
17	43226139	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.363636
17	43226148	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.3
20	43467114	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
6	43615907	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.75
6	43615932	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.4
6	43615933	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.133333
6	43615946	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.705882
6	43616416	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.1
6	43616442	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	43616468	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	43616469	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.238095
6	43617372	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.25
6	43617507	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.25
6	43617742	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.25
15	43749821	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.357143
11	43857012	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.142857
11	43857059	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.0952381
11	43866184	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.428571
11	43866243	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.166667
2	44223079	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.363636
2	44223084	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.214286
1	44434596	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.277778
1	44481346	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
15	44601040	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.272727
5	44815612	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0638298
5	44815623	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.113208
5	44815669	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.320755
5	44815670	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0754717
5	44815671	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0377358
5	44815675	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.185185
5	44816347	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0384615
5	44816441	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0921053
7	44830948	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0298507
7	44832686	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0205479
7	44832701	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.412903
7	44832704	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.115385
7	44832705	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0387097
7	44832777	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0689655
7	44832815	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.028169
7	44832820	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.5
7	44832822	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.205882
7	44832828	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2125
7	44832838	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0537634
7	44832855	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0471698
7	44832867	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.162963
7	44832874	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.370079
7	44832881	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.118881
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.226562
7	44832912	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0416667
7	44832917	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0336134
7	44833090	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0346821
7	44833102	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0263158
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0827068
7	44833133	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.112782
7	44833140	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0229008
7	44833222	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0220588
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.175182
7	44833263	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0465116
7	44833300	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.337838
7	44833305	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0516129
7	44833329	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0645161
7	44833330	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.179688
7	44833371	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.71875
7	44833397	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.540541
7	44833401	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0405405
7	44833402	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0493827
7	44833404	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.160494
7	44833453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.25
7	44833460	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0786517
7	44833464	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0294118
7	44833499	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0423729
7	44833507	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.341667
7	44833508	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.059322
7	44833567	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0217391
7	44833578	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0681818
7	44833590	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0212766
7	44836085	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.153846
7	44836235	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.105263
7	44838082	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.391304
7	44838095	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44838148	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.125
7	44838163	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.259259
7	44838174	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.346154
7	44838201	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.6
7	44838246	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44838406	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44838478	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.571429
7	44838558	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.15
7	44838566	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44838567	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.238095
X	44883609	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.153846
19	45012884	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45012886	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45013738	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
14	45207591	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.352941
14	45207613	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.1875
14	45208461	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.166667
12	45250993	A->G	+	ENSG00000177119	ANO6	protein_coding	Intergenic	.	.	Alu	0.3
17	45505605	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15625
17	45505641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
17	45505642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.259259
17	45505951	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
17	45505982	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
17	45506007	A->G	-	.	.	.	Intergenic	.	.	Alu	0.619048
17	45506025	A->G	-	.	.	.	Intergenic	.	.	Alu	0.380952
17	45506051	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	45506626	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	45506660	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
17	45506702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	45653316	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
1	45656777	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.3
1	45656794	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45671295	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
10	45993392	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.3
18	46059338	A->G	-	ENSG00000152229	PSTPIP2	protein_coding	Intergenic	.	.	Alu	0.2
21	46321307	A->G	-	ENSG00000160298	C21orf58	protein_coding	Intergenic	.	.	Alu	0.142857
3	47132430	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.588235
3	47132468	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.4
11	47367960	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.416667
11	47367981	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.363636
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480818	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480887	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.352941
11	47534121	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47534125	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.230769
11	47534166	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47534596	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47765942	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.1
2	47878896	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
4	48141886	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.3
4	48141900	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.2
4	48142352	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.8
4	48142387	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.285714
4	48142390	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.214286
19	48328957	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.166667
19	48458549	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.428571
19	48458575	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.230769
19	48458593	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.166667
19	48458772	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.307692
19	48458775	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.25
19	48459443	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.333333
19	48459474	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.2
19	48459507	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.181818
19	48459528	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.166667
X	48580591	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.272727
X	48580668	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.0769231
12	48664787	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.238095
3	48691906	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.111111
3	48697363	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.166667
3	48697364	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.153846
3	48697423	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0952381
3	48697426	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.15
3	48699151	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.3125
3	48714455	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0769231
3	48714461	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.15
3	48714586	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.111111
17	48866933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	48867906	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	48867938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	49089180	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49321596	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.3
3	49321605	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
18	49389787	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.636364
3	49407047	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0869565
14	49584176	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.05
14	49632957	A->G	-	ENSG00000165506	DNAAF2	protein_coding	Intergenic	.	.	Alu	0.115385
3	50097207	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	50097275	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50099134	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.153846
3	50099148	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.363636
15	50099356	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	50099418	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.384615
3	50111481	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.230769
3	50112269	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50112295	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.25
3	50112305	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.25
3	50112337	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
13	50118813	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.181818
13	50118814	A->G	-	ENSG00000176124	DLEU1	processed_transcript	Intergenic	.	.	Alu	0.181818
14	50193919	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.166667
14	50193948	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.230769
14	50197785	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.142857
14	50197821	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.117647
14	50197827	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.235294
3	50333699	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	50335518	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.1
3	50335592	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	50335770	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	50335807	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.107143
3	50335829	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0740741
15	50345393	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.153846
15	50345472	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
5	50413648	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.0952381
5	50413652	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.388889
5	50413659	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.117647
5	50413672	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.176471
17	50730855	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50730872	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.2
17	51027229	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.363636
17	51027349	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51086835	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51109850	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51116118	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51116122	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.214286
3	51487229	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.181818
19	52193910	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.428571
19	52193929	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.3
19	52193930	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.2
3	52414903	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.235294
3	52414951	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.16
3	52414953	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.384615
3	52414959	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.0833333
3	52415245	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.6875
3	52415252	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.2
3	52415261	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.0909091
3	52415277	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.178571
3	52415296	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.0816327
3	52415297	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.326531
3	52415314	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.166667
13	52629816	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
13	52630414	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
19	52642991	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.4
19	52647527	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.142857
19	52647541	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.307692
8	52698591	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.125
8	52698899	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.153846
8	52698928	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.166667
19	52700388	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
8	52701304	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
8	52701328	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.133333
19	52702547	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
19	52702582	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
8	52706796	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52706799	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.272727
8	52706855	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.40625
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.1
14	52714633	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.142857
14	52714642	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.2
14	52714772	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.125
3	53253400	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.363636
3	53253405	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.25
5	53563602	A->G	+	ENSG00000164258	NDUFS4	protein_coding	Intergenic	.	.	Alu	0.2
3	53863947	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.47619
3	53863971	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.423077
3	53863987	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.0714286
3	53864011	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.172414
3	53864347	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.111111
3	53864372	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.235294
3	53866228	A->G	-	.	.	.	Intergenic	.	.	Alu	0.44
3	53866262	A->G	-	.	.	.	Intergenic	.	.	Alu	0.259259
3	53866284	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
3	53866289	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
3	53866375	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
3	53866578	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
3	53866620	A->G	-	.	.	.	Intergenic	.	.	Alu	0.45
3	53866659	A->G	-	.	.	.	Intergenic	.	.	Alu	0.444444
3	53866662	A->G	-	.	.	.	Intergenic	.	.	Alu	0.705882
19	53872610	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.117647
19	53873114	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.0645161
2	53965396	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.130435
2	53965425	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	53965433	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.32
2	53965489	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0645161
2	53965875	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0769231
8	53993200	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	54051127	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.166667
19	54202926	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0521739
19	54202950	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.103448
19	54203577	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.020202
19	54203587	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0357143
19	54203648	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0378788
19	54203703	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0218978
19	54204108	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0526316
19	54204125	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.021978
19	54204226	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0631579
19	54204227	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0714286
19	54204465	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0891089
19	54204526	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0530973
19	54204600	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0333333
19	54204628	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0314961
19	54205886	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0652174
19	54205998	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0224719
12	54288861	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.266667
X	54562102	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
X	54562110	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54562126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54562145	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
X	54562146	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
X	54562150	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
X	54562172	A->G	+	.	.	.	Intergenic	.	.	Alu	0.225806
X	54562175	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
X	54562185	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
X	54562211	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0731707
X	54562220	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
X	54562226	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
X	54562229	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
X	54562243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.195122
X	54562246	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
X	54562252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54562255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	54562268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
X	54562280	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
X	54562281	A->G	+	.	.	.	Intergenic	.	.	Alu	0.541667
X	54562285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.113636
X	54562289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.209302
X	54562308	A->G	+	.	.	.	Intergenic	.	.	Alu	0.282051
X	54562329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0638298
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.168831
X	54562666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
X	54562672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0958904
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.22973
X	54562678	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0428571
X	54562699	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0612245
X	54562705	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.491525
X	54562713	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03125
X	54562734	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
X	54562748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
X	54563506	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0246914
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.253333
X	54563522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.156627
X	54563528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.108434
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.411765
X	54563555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
X	54563564	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
X	54563574	A->G	+	.	.	.	Intergenic	.	.	Alu	0.102941
X	54563582	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
X	54563583	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0322581
X	54563593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03125
X	54563600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15625
X	54563623	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
X	54563626	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54563630	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
X	54563633	A->G	+	.	.	.	Intergenic	.	.	Alu	0.194444
X	54563634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.171429
X	54563639	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
X	54563647	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
X	54563665	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54563675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.140625
X	54563679	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0273973
X	54563688	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
X	54563692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0777778
X	54563695	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0210526
X	54563711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.185841
X	54563731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0731707
X	54564488	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54564500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.245283
X	54564507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.211538
X	54564508	A->G	+	.	.	.	Intergenic	.	.	Alu	0.442308
X	54564525	A->G	+	.	.	.	Intergenic	.	.	Alu	0.097561
X	54564582	A->G	+	.	.	.	Intergenic	.	.	Alu	0.188679
X	54564588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.442308
X	54564591	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
X	54564605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54564617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.22449
X	54564630	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
X	54564658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.264706
X	54564814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.33871
X	54564820	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
X	54564833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
X	54564834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54564838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
X	54564863	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
X	54564864	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0816327
X	54564873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.122449
X	54564875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
X	54564899	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
X	54564914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.442308
X	54564917	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
X	54564937	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
X	54564944	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54564971	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	54564972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
X	54564978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
X	54564982	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54566807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54566813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
X	54566873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
X	54566874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
X	54566886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.451613
X	54568814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
14	55058709	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.176471
14	55058752	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.125
14	55058753	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.111111
14	55058757	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.111111
14	55278711	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0666667
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.317073
14	55278767	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0535714
14	55278804	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0350877
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.117647
14	55278828	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.130435
14	55278844	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55278859	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55278870	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55278877	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.357143
14	55279042	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55279055	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.421053
14	55279112	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0408163
14	55279129	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0350877
14	55279140	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0535714
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.075
14	55279167	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0512821
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.171429
14	55279206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.210526
14	55279207	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.157895
14	55281133	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.518519
14	55281193	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.291667
14	55281219	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1
14	55285226	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.105263
14	55290272	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.208333
4	55401952	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.2
8	55889437	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55890218	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55890232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55890802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.285714
8	55890840	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.363636
8	55890857	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55890867	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.4
8	55891231	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.352941
8	55891232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.529412
8	55891258	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55896222	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55896819	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55906518	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55906537	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.307692
8	55906694	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55917131	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
7	56010595	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
7	56010605	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
7	56010631	A->G	-	.	.	.	Intergenic	.	.	Alu	0.172414
7	56010639	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
7	56010642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
7	56010643	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	56010644	A->G	-	.	.	.	Intergenic	.	.	Alu	0.172414
7	56010646	A->G	-	.	.	.	Intergenic	.	.	Alu	0.310345
7	56010647	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
7	56010649	A->G	-	.	.	.	Intergenic	.	.	Alu	0.607143
7	56010666	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	56010668	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
7	56010699	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
7	56010712	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
8	56068901	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0740741
8	56068904	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.107143
8	56068907	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0740741
8	56068914	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.62963
8	56068927	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.185185
8	56068973	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.173913
8	56068977	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0909091
8	56068991	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.263158
8	56069030	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.307692
8	56069271	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.137931
8	56069384	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0869565
8	56069395	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0869565
8	56069404	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0909091
8	56069413	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.238095
8	56069436	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.380952
8	56069437	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.3
8	56069493	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.2
8	56069498	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.133333
8	56070533	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.08
8	56070553	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.24
8	56072427	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.15
8	56072430	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.0869565
8	56072469	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.08
18	56612139	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.181818
18	56612140	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.181818
12	56685888	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.2
12	56730464	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.4
12	56730478	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.272727
12	56730505	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.157895
12	56730532	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.526316
12	56730549	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0869565
12	56730563	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.166667
12	56730573	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.142857
12	56730641	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.162162
12	56730642	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.131579
12	56730651	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.366667
12	56730696	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.875
12	56730721	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.357143
12	56730765	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.111111
12	56730775	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.176471
12	56730940	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.153846
12	56731266	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.030303
12	56731282	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.05
12	56731292	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.147541
12	56731344	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0888889
12	56731348	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.133333
12	56731351	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.387755
12	56731355	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.276596
12	56731356	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0638298
12	56731396	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.282051
12	56731397	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0769231
12	56731436	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0666667
12	56731437	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0689655
12	56731460	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0666667
12	56731462	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.25
12	56731463	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.166667
12	56731486	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0769231
6	57057107	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
6	57057921	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
6	57057924	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
6	57058030	A->G	+	.	.	.	Intergenic	.	.	Alu	0.305556
4	57108670	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.2
4	57108679	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.166667
16	57182675	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.2
16	57182693	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.166667
3	57775829	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.2
19	57866787	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.111111
19	57866788	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.263158
19	57866806	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.25
19	57866820	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.235294
19	57866876	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
19	57866917	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.222222
19	57866918	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.222222
19	57866981	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.583333
19	57866982	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.25
17	58274563	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.190751
17	58274599	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.245283
17	58274632	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.153846
17	58274692	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.202247
17	58274695	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.511364
17	58274773	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0833333
17	58340501	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58340547	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.357143
17	58340588	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58342883	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.142857
17	58342889	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.142857
15	58922929	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.117647
15	58926841	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.133333
15	58926846	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.1875
15	58930252	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.117647
17	59203244	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.103448
17	59203256	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.129032
17	59203380	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.0869565
17	59203390	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.0833333
17	59203399	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.25
17	59203405	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.2
17	59203408	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.826087
17	59203409	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.826087
17	59203410	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.130435
17	59203434	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.0714286
17	59203459	A->G	+	ENSG00000068489	PRR11	protein_coding	Intergenic	.	.	Alu	0.34375
17	59204767	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.0454545
17	59204943	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.12
14	60256382	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.1875
2	61511973	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	61512002	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.166667
11	61798234	A->G	-	ENSG00000134824	FADS2	protein_coding	Intergenic	.	.	Alu	0.2
2	61882071	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.105263
2	61882581	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	61882637	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.2
2	61882706	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.181818
17	61998660	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.153846
17	61998697	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
1	62449049	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	62449654	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.357143
1	62449702	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	62449765	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.555556
1	62449797	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	62454248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
1	62454260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
17	62475475	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.357143
17	62476461	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.142857
17	62476483	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.133333
17	62476822	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0740741
17	62476837	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.142857
17	62476847	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.210526
11	62738822	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.142857
11	62738890	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.208333
11	62738944	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.1875
11	62739518	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.533333
11	62823272	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62823273	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.230769
11	62823356	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.153846
11	62840855	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.1
11	62840941	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.181818
11	62841022	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.142857
11	62841151	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.0952381
10	63249712	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.230769
10	63249748	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.153846
10	63250244	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.176471
10	63250267	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63250276	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
15	63545762	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63545785	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63546870	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.210526
15	63548230	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.5
12	63587711	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.181818
12	63587755	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.416667
12	63588892	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.166667
12	63588918	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.277778
12	63588956	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.176471
17	63770085	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.25
17	63840420	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.2
2	64139403	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0540541
2	64139404	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.105263
15	64359610	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.208333
15	64359611	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.08
15	64359615	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.222222
15	64359635	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64359675	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.266667
15	64359681	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.769231
15	64359747	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.5
15	64359821	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.133333
15	64359823	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.285714
15	64359853	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.133333
15	64359856	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.125
15	64359858	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	64359910	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	64361405	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.16129
15	64361417	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0810811
15	64361433	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0526316
15	64361447	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.28125
15	64361476	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64361499	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.214286
15	64361534	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.125
15	64361594	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	64361599	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.1875
15	64361634	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.35
15	64361646	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	64362471	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.214286
15	64362496	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	64362501	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.590909
15	64362522	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	64363197	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64363227	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.307692
15	64363228	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.384615
15	64363779	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.214286
15	64363820	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.235294
12	64407260	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.230769
17	64655366	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.25
17	64655367	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.166667
17	64920688	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
1	64940590	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.2
1	64940930	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.1875
2	65101981	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65127544	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.454545
2	65127604	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.15625
2	65127643	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0645161
2	65127866	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65127872	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.125
11	65772932	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
11	65772933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.610169
11	65772989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.113924
11	65774508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
11	65774544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0970149
11	65774549	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0725806
11	65774589	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0314961
11	65774602	A->G	-	.	.	.	Intergenic	.	.	Alu	0.03125
11	65774681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0267176
11	65774682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0381679
11	65774688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.025
11	65774690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0300429
15	65774940	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65788270	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
7	65981118	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.2
12	66193998	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.047619
12	66194002	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	66194007	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.113636
12	66194056	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.185185
12	66194058	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	66202503	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	66202516	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.1875
12	66202517	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.117647
12	66202776	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.3
2	66560399	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.166667
2	66560400	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.25
2	66560404	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.314286
2	66560501	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.25
11	66629807	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.173913
11	66629960	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.16129
11	66629984	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.1875
11	66635027	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.24
11	66635105	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66635117	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.08
11	66635414	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66635415	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66635423	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66635424	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.230769
11	66635425	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.461538
11	66635467	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.117647
11	66635643	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66635650	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.190476
11	66635772	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0952381
11	66636065	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66636110	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66636127	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.333333
11	66636139	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66636149	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4375
11	66636193	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.235294
11	66636275	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66649517	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.102564
7	66685422	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.259259
7	66687572	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
8	66717449	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.181818
7	66741883	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.384615
7	66741948	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0740741
7	66742707	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0689655
7	66742740	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.137931
7	66742791	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.08
7	66743196	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.15
7	66743200	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.32
7	66743386	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.12
7	66743450	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0769231
7	66745711	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
1	66936297	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.266667
1	66936494	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.111111
1	66936501	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.352941
1	66936507	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.117647
1	66936745	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.1
1	66936746	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.307692
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.357143
1	66936927	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.176471
1	66937505	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.222222
1	66937535	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.227273
17	67351965	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.190476
17	67351969	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.444444
17	67351975	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67351988	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.190476
17	67352011	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67353404	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.3
17	67353405	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.227273
17	67353432	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.391304
17	67353468	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.210526
17	67354760	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0952381
17	67354862	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.15625
17	67354878	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0606061
17	67354881	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0588235
17	67354943	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.36
17	67354946	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0909091
17	67355246	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.153846
17	67355265	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0588235
17	67355269	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0588235
16	67566670	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.111111
17	67876610	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.142857
10	67890675	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	67896687	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
15	68059643	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.1875
17	68126036	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
17	68126096	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0526316
12	68613100	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0273973
12	68623768	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1
16	69323841	A->G	-	ENSG00000132612	VPS4A	protein_coding	Intergenic	.	.	Alu	0.125
16	69571253	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0952381
16	69571254	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0952381
2	69928685	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.15
2	69928766	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	69928775	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.103448
2	69928785	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.310345
2	69928790	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.214286
5	69980859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	69980864	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
5	69980933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
2	70246061	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
10	70416388	A->G	+	ENSG00000148730	EIF4EBP2	protein_coding	Intergenic	.	.	Alu	0.4
10	70416485	A->G	+	ENSG00000148730	EIF4EBP2	protein_coding	Intergenic	.	.	Alu	0.272727
4	70716380	A->G	+	ENSG00000018189	RUFY3	protein_coding	Intergenic	.	.	Alu	0.142857
4	70716398	A->G	+	ENSG00000018189	RUFY3	protein_coding	Intergenic	.	.	Alu	0.461538
X	71055308	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	71055315	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	71056186	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
X	71056279	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	71056303	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	71057789	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.4
3	71343771	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
12	71658426	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	71658445	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0833333
12	71661620	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.227273
12	71661685	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.166667
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.24
12	71661747	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	71776450	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.102041
3	71776456	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0625
3	71776493	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0851064
3	71776560	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	71850864	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.416667
12	71850866	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.153846
12	71850872	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.153846
12	71850888	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.3
3	72416091	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.2
3	72416166	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.3
3	72416701	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.142857
15	72489192	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0571429
15	72489193	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0571429
15	72575018	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.230769
15	72575023	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.153846
15	72575032	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
6	72690179	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.3
15	72763250	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.363636
15	72779446	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.142857
5	72863591	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.153846
5	72863641	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.125
5	72868285	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.25
7	72981981	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
7	72982000	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
7	72995656	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0909091
7	72995721	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
7	72995872	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.769231
7	72995873	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
14	73069550	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.181818
14	73069551	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.166667
9	73154538	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.025974
9	73154539	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0326797
9	73154677	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0806452
9	73157385	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0465116
9	73157453	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0291262
9	73157454	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.02
9	73157463	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0222222
9	73157496	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0449438
9	73157534	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0555556
4	73241029	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.181818
4	73241030	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.166667
7	73461839	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.678571
7	73461844	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.315789
7	73461845	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.210526
7	73461860	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.409091
7	73461916	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.4
7	73461917	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.4
7	73461963	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.181818
7	73462034	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.5
7	73462039	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.357143
7	73462137	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	73513847	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	73513848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.297297
6	73513849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
6	73513909	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
6	73513970	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
6	73513976	A->G	-	.	.	.	Intergenic	.	.	Alu	0.207547
6	73513980	A->G	-	.	.	.	Intergenic	.	.	Alu	0.160714
6	73514135	A->G	-	.	.	.	Intergenic	.	.	Alu	0.23913
6	73514305	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	73514311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
6	73514337	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
6	73514443	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
6	73514451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
6	73514594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.132075
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
6	73514607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
6	73514814	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0266667
6	73514842	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
6	73514875	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0215054
6	73514880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0721649
7	73515640	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.181818
10	73776895	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.636364
10	73776941	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.1875
10	73777598	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0869565
10	73777632	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.727273
10	73777649	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0606061
10	73777654	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.181818
10	73777655	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.151515
10	73777694	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.1
10	73777939	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.257143
10	73777959	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0666667
10	73777960	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.103448
10	73777964	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.115385
10	73778138	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.294118
8	73873017	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.357143
8	73873091	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.5
8	73873465	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.307692
8	73873466	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.142857
8	73873534	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.15
8	73873547	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.1
14	74086638	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.2
7	74178053	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.129032
7	74178318	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.12
7	74178343	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0967742
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.178571
7	74178423	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.108108
7	74178450	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.178571
7	74178465	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.190476
X	74277823	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.642857
X	74277839	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
7	74879923	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	74880402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
7	74880419	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
7	74880420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
7	74880474	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
7	74880497	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
7	74880505	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4375
7	74880525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	74880529	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
7	74880572	A->G	-	.	.	.	Intergenic	.	.	Alu	0.642857
7	74880861	A->G	-	.	.	.	Intergenic	.	.	Alu	0.541667
7	74880881	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
7	74880883	A->G	-	.	.	.	Intergenic	.	.	Alu	0.178571
7	74880906	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
7	74880908	A->G	-	.	.	.	Intergenic	.	.	Alu	0.185185
7	74880916	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
7	74880999	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
7	74882033	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
7	74882034	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
7	74882040	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	75104591	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.125
17	75373926	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.6
7	75396233	A->G	+	ENSG00000178809	TRIM73	protein_coding	Intergenic	.	.	Alu	0.125
10	75557052	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
16	75598333	A->G	-	ENSG00000065457	ADAT1	protein_coding	Intergenic	.	.	Alu	0.0909091
16	75598761	A->G	-	ENSG00000065457	ADAT1	protein_coding	Intergenic	.	.	Alu	0.0666667
16	75648987	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.15
16	75651568	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.136364
16	75651610	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.181818
4	75916917	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.133333
4	75916918	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.1875
7	76348722	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.153846
18	76809170	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.142857
4	77056725	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.272727
14	77534106	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.142857
14	77539582	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.133333
14	77539592	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.333333
X	77883658	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.368421
X	77883661	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.111111
X	77883697	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.153846
1	77976632	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.217391
16	78119731	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.272727
X	78132094	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.117647
X	78132159	A->G	+	ENSG00000187325	TAF9B	protein_coding	Intergenic	.	.	Alu	0.3
11	78389444	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.181818
11	78389445	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.181818
15	78875693	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.142857
15	78875697	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	78875730	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.142857
15	78888232	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.121212
15	78888310	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0857143
15	78888315	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.09375
15	78888316	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.125
15	78898243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
15	78898244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
15	78898315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.206897
15	78898419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	78898431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
15	78898448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
15	78899260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
15	78899285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
15	78899331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.097561
15	78899337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
15	78899417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
15	78899429	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	78899431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	78899500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
15	78899549	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
15	80066510	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.3
15	80066688	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
16	81029539	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.4
16	81029704	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.181818
16	81029740	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.285714
16	81029784	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.307692
16	81030629	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.363636
16	81030704	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.2
17	81856400	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.2
17	81856718	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.2
17	81856746	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.181818
17	81856747	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.181818
17	81856755	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.230769
17	82264994	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.181818
9	83697897	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.2
16	85597549	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.181818
2	85609818	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.454545
2	85609819	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.727273
2	85610153	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.2
2	85610163	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.3
6	85633760	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0625
6	85633777	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0588235
6	85633895	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.119048
6	85633903	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0444444
11	86049679	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.363636
4	87022012	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.454545
4	87022054	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.125
4	87022055	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.1875
4	87022058	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.1875
4	87022085	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.285714
4	87072201	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.142857
4	87072347	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.2
4	87072591	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.263158
10	87208394	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.3
10	87208414	A->G	-	ENSG00000223482	NUTM2A-AS1	antisense	Intergenic	.	.	Alu	0.181818
6	87514055	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
10	87891739	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0909091
10	87891740	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0869565
1	88866254	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.2
1	88866680	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.3
1	88884231	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.153846
16	89736030	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.375
6	89816879	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.2
6	89816880	A->G	-	ENSG00000112159	MDN1	protein_coding	Intergenic	.	.	Alu	0.2
15	90077862	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intergenic	.	.	Alu	0.263158
15	90082826	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
15	90082829	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0967742
15	90082848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
15	90082856	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
15	90082864	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
15	90082885	A->G	-	.	.	.	Intergenic	.	.	Alu	0.178571
15	90082904	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
15	90082926	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
7	90626819	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.3
9	90876193	A->G	+	ENSG00000165025	SYK	protein_coding	Intergenic	.	.	Alu	0.4
9	91292443	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.4
9	91292472	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.230769
9	91292506	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.176471
9	91294315	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.125
14	91503050	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.266667
7	92711660	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.7
7	92711994	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.571429
7	92711999	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.636364
7	92811896	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0606061
7	92811931	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0645161
7	92812653	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0588235
15	92889425	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.210526
15	92890756	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0757576
15	92890757	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0285714
15	92893938	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0967742
15	92894069	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.173913
15	92894748	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.285714
1	93155737	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.136364
9	93445729	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
9	93473445	A->G	+	ENSG00000048828	FAM120A	protein_coding	Intergenic	.	.	Alu	0.193548
9	93473447	A->G	+	ENSG00000048828	FAM120A	protein_coding	Intergenic	.	.	Alu	0.151515
14	94053468	A->G	-	ENSG00000089737	DDX24	protein_coding	Intergenic	.	.	Alu	0.166667
10	94607775	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.245614
10	94607857	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.2
10	94607867	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.317073
12	95482720	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.181818
12	95482984	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.363636
10	97375878	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97375982	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.285714
10	97376027	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.15
10	97376455	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97376485	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97376486	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.266667
8	97647442	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.136364
8	97647869	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.0740741
8	97667091	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.142857
8	97667103	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.2
8	97729031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
8	97729059	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0545455
8	97729154	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0461538
8	97729162	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
8	97729188	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0649351
8	97729189	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
8	97729201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
8	97729686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0754717
8	97729744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
8	97729765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
9	97921311	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.153846
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.37931
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.5
12	98596782	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.181818
12	98596898	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.09375
12	98597476	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.1
12	98597563	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.047619
4	99063340	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	99197718	A->G	+	ENSG00000241962	AC079447.1	protein_coding	Intergenic	.	.	Alu	0.12
2	99197721	A->G	+	ENSG00000241962	AC079447.1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	99197741	A->G	+	ENSG00000241962	AC079447.1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	99197758	A->G	+	ENSG00000241962	AC079447.1	protein_coding	Intergenic	.	.	Alu	0.08
2	99197774	A->G	+	ENSG00000241962	AC079447.1	protein_coding	Intergenic	.	.	Alu	0.117647
2	99197780	A->G	+	ENSG00000241962	AC079447.1	protein_coding	Intergenic	.	.	Alu	0.125
13	99318224	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.2
13	99318237	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	1
13	99318245	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.272727
6	99405689	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.363636
6	99405719	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.153846
7	99496615	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.142857
7	99497313	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.8
7	99497339	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.2
7	99497385	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.75
12	100035549	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.363636
1	100067324	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.2
1	100067749	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.2
12	100136089	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.2
12	100137014	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.166667
7	100319105	A->G	-	ENSG00000214300	SPDYE3	protein_coding	Intergenic	.	.	Alu	0.181818
8	100713684	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	100716315	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.1
8	100716318	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0338983
2	101275229	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1
2	101275256	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101288457	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.142857
X	101343363	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
X	101343413	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
X	101343433	A->G	-	.	.	.	Intergenic	.	.	Alu	0.28
3	101586657	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.272727
10	101789412	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101789771	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.3
10	101789903	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.5
10	101789917	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101790544	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4
12	101824582	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
14	102347936	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.2
11	102427604	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.181818
11	102427657	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.3
14	102612734	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102612807	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
4	102790748	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
10	103166755	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103177600	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.115385
10	103178285	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.222222
10	103178303	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.333333
10	103178304	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103178322	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.333333
10	103178421	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0833333
10	103178436	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	103178437	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	103178445	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103178588	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103178598	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.607143
10	103178638	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.24
10	103178665	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.5
10	103178668	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.190476
10	103178767	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103178768	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103179113	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103179122	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0833333
10	103179128	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0833333
10	103179156	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.206897
10	103179189	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103179198	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103179203	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103179219	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.192308
10	103179220	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.08
10	103179226	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.32
10	103180475	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.266667
10	103189765	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
14	103682633	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.333333
12	104461969	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0526316
12	104545882	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104637025	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104686181	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
7	104946021	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.111111
7	105023252	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.157895
7	105023255	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0909091
7	105023515	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0857143
7	105023574	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0731707
7	105023611	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0689655
7	105049183	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
8	108226468	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.2
8	108226469	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.5
1	109063527	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.152174
1	109063534	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.235294
1	109063570	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0540541
1	109063609	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.102564
1	109063617	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0487805
1	109063618	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0952381
1	109063714	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.181818
9	110245868	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.212121
9	110245877	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0833333
9	110245943	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.214286
9	110245964	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0943396
9	110245965	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.111111
9	110245978	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.107143
9	110245982	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0652174
9	110246013	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.146341
9	110246029	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.388889
12	110447690	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.230769
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.333333
12	110448092	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.2
6	110477331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.45
6	110477805	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	110477808	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
13	110895417	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.125
6	110896874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.183333
6	110896919	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0537634
6	110897119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.205882
6	110897484	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162162
6	110897569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.297297
6	110897570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.189189
6	110897573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.243243
6	110897629	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
6	110897630	A->G	+	.	.	.	Intergenic	.	.	Alu	0.075
6	110897659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12963
6	110897679	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
6	110897962	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
6	110897981	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	110898053	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
6	110898061	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
6	110898075	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
6	110898102	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
6	110898103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0566038
13	110899994	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.232558
13	110900009	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.113636
13	110900040	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.266667
10	110924845	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.133333
10	110924911	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0645161
10	110924912	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0967742
6	110968097	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	110968099	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
6	110968174	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
6	110968212	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
6	110970881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	110970920	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	110970949	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
6	110970980	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
9	111480400	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.133333
9	111480422	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.142857
9	112036464	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intergenic	.	.	Alu	0.4
9	112038648	A->G	-	.	.	.	Intergenic	.	.	Alu	1
7	112343799	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.125
9	112475216	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.230769
9	112475217	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.769231
9	112475224	A->G	+	ENSG00000230185	C9orf147	antisense	Intergenic	.	.	Alu	0.230769
1	112623431	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	112623544	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.363636
2	112655243	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.08
1	112663619	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	112663628	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.214286
1	112663631	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.4
1	112663641	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	112664023	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	113293510	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	113708649	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0882353
2	113709956	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.216216
2	113709979	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0857143
2	113709980	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.153846
3	113729059	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.181818
2	113936171	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.153846
12	116165471	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.454545
12	116206219	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116254569	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.4
12	116254577	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.3
11	116884265	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
7	116888795	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.214286
11	116922542	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	116922582	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.235294
11	116922583	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	116923014	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117014077	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
12	117031458	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	117031499	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5625
12	117031504	A->G	+	.	.	.	Intergenic	.	.	Alu	0.764706
12	117031512	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
12	117031666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
11	117063648	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117063706	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.235294
11	117063707	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117063763	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.12
11	117063823	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.176471
11	117063838	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.210526
11	117070415	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	117072325	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117072326	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
1	117082987	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.3
1	117082988	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.3
11	117085169	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0833333
11	117085185	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.26087
11	117085264	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.296296
11	117085343	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117085345	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.176471
12	118356421	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.173913
12	118356422	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0909091
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.307692
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.241379
12	118356707	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.1
12	118356800	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.4
12	118356839	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0740741
12	118356840	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.111111
12	118356900	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.157895
12	118356922	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.105263
12	118365335	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.117647
12	118365349	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.461538
5	118836442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
11	118996012	A->G	-	ENSG00000255121	AP003392.4	lincRNA	Intergenic	.	.	Alu	0.2
11	119001829	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.266667
8	120052817	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.181818
8	120052818	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.181818
8	120052876	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.142857
8	120052885	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.333333
8	120053821	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.333333
8	120053827	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.428571
8	120053841	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.166667
8	120053870	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.5
8	120055141	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.722222
8	120055166	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.3
8	120055176	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.176471
8	120055178	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.266667
8	120055909	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.166667
12	120544455	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.136364
12	120544475	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.105263
12	120544536	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.1
12	120544550	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.157895
12	120555930	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.153846
12	120556969	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.181818
12	120557013	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.4
12	120568124	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.181818
7	122074911	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
12	122412134	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.125
12	122412142	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.5
12	122412166	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.125
12	122412193	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.307692
12	122412571	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.304348
12	122412592	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	122412617	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.111111
12	122512078	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.132075
12	122513946	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0877193
9	122817166	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.111111
9	122817175	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.222222
9	122817187	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.1875
9	122817331	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.181818
9	122817368	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.111111
12	122869778	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.230769
12	123323418	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.4
8	123379671	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.230769
12	123434174	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1
12	123434302	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.333333
12	123434357	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.136364
12	123434379	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1875
12	123434382	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.6
12	123434384	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.4
9	125187448	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.214286
9	125187526	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.217391
9	125793264	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.461538
9	125793284	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.25
9	125793302	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.181818
9	125834432	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	125834484	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.545455
9	125834497	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.25
11	126346967	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.375
11	126346970	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.25
11	126347002	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.133333
11	126347066	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.181818
2	127334652	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.3
2	127349432	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.3
9	127790866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
9	127790891	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
9	127790892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
9	127790896	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	127790909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127790921	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127790931	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127791000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	127791033	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
9	127791038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
9	127791046	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
9	127791048	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127791060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
9	127791443	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
9	127791444	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
9	127791461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
9	127791483	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0851064
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
9	127791856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0545455
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0566038
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0727273
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
9	127791902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0681818
9	127791926	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	127792057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127792300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
9	127792340	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137255
9	127793178	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
9	127793179	A->G	+	.	.	.	Intergenic	.	.	Alu	0.185185
9	127793977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127794000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
9	127794017	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127794029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	127795012	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0952381
9	127795154	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.125
9	127795155	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1875
9	127795222	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.176471
9	127795356	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0666667
9	127795556	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.214286
9	127795557	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.142857
9	127805306	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.25
9	127805324	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.458333
9	127805365	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.315789
7	128655714	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
7	128659370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.258065
7	128661248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
7	128661292	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
7	128661370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
7	128661371	A->G	+	.	.	.	Intergenic	.	.	Alu	0.146341
3	128740287	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.214286
3	128740654	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128740816	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.25
3	128744168	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.25
8	129910885	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
9	129954805	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.125
9	129954831	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129955263	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.1
8	130001667	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	130001746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	130002379	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.357143
9	130029234	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	130029253	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.214286
9	130704983	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
9	130705010	A->G	+	.	.	.	Intergenic	.	.	Alu	0.131579
9	130705038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
9	130705064	A->G	+	.	.	.	Intergenic	.	.	Alu	0.387097
9	130705066	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	130705067	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	130705070	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
9	130705073	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
9	130705092	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	130705111	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
9	130705115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.395833
9	130705131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
9	130705134	A->G	+	.	.	.	Intergenic	.	.	Alu	0.170213
9	130705173	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	130705178	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	130705267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
9	130705268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.55
9	130705306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.34375
9	130705311	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	130705341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
9	130705643	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
9	130705653	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
9	130705756	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
9	130705771	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
9	130705783	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
9	130705833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.219512
9	130705834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.170732
9	130705846	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
9	130705997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705998	A->G	+	.	.	.	Intergenic	.	.	Alu	0.433333
9	130706015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	130706037	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	130706063	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130706078	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
9	130706081	A->G	+	.	.	.	Intergenic	.	.	Alu	0.466667
9	130706090	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130706107	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	130706148	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
9	130706158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
9	130706740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
9	130706801	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130706802	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
9	130706811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.171429
9	130706820	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	130706880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	130871767	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.125
3	130871825	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.1
3	131008223	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.166667
2	131129231	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.2
5	131159928	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131159990	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.230769
5	131160016	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0555556
2	131506503	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.153846
2	131506537	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.4
5	131687234	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131687243	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.230769
5	131687244	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.25
10	131902865	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.125
10	131902886	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.230769
10	131902906	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.157895
10	131903004	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.133333
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.133333
10	131903313	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0666667
10	131903382	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.1
5	132917940	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.363636
5	132918505	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132918507	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.363636
5	132942874	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.25
5	132949303	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.176471
5	132949304	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.176471
5	132951736	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.1875
10	133294676	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.2
10	133294700	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.3
5	134379590	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.307692
5	134379591	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.25
5	134380016	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.125
5	134381507	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.125
5	134743075	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.2
5	134743808	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.2
5	134744404	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.166667
6	135204398	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.130435
6	135204901	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.189189
6	135204909	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.225
6	135205951	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.142857
6	135206317	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.157895
6	135206489	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.1875
6	135206520	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.1875
6	135206531	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.111111
6	135206534	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0869565
6	135206576	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.210526
6	135206621	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.26087
6	135206631	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.08
6	135206671	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.380952
6	135209297	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0689655
6	135209298	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0967742
6	135209314	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0625
6	135209414	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.193548
6	135209417	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.1
6	135209486	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0869565
6	135209502	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.26087
7	135479768	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.4
3	136331402	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.133333
3	136331415	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.666667
3	136331424	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.4375
3	136331430	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.142857
3	136331433	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.166667
3	136331561	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.3
3	136331983	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.84
3	136332041	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.0833333
3	136744955	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.416667
6	136786272	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.12766
6	136786300	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.075
6	136786304	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0526316
6	136786320	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0512821
X	136877553	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.333333
X	136877562	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.117647
5	138524441	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.157895
5	138524458	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.1
5	138573296	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.4
3	138643683	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
4	139021237	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.108108
4	139021254	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.0909091
4	139021264	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.0625
4	139021265	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.0909091
4	139046043	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0229885
4	139046837	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0731707
4	139047244	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0985915
4	139047249	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0571429
4	139047299	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.106383
4	139047312	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0625
4	139047313	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.304348
4	139047323	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0689655
4	139047352	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.115385
4	139047378	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0714286
4	139047379	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139047388	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.193548
4	139047402	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0714286
7	139071151	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.105263
7	139080522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0652174
4	139170370	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.117647
5	139284487	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.115385
5	139284488	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.185185
5	139284520	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	139284528	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	139284535	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.37931
5	139284536	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.896552
5	139284540	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.241379
5	139348057	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.142857
5	139348058	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.2
7	139368658	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139368659	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139370481	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.08
7	139378387	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.125
7	139378475	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.230769
7	139378476	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139396426	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
4	139400146	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.272727
4	139400172	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.333333
7	139418854	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.113636
7	139418898	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0784314
7	139418908	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0833333
7	139418972	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.08
7	139419000	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0740741
7	139420465	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.105263
2	143272510	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.181818
2	143272532	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.727273
2	143272533	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.727273
2	143272538	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.214286
2	143272578	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.8
2	143374738	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.166667
5	145757764	A->G	-	ENSG00000186314	PRELID2	protein_coding	Intergenic	.	.	Alu	0.214286
1	145794071	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.214286
7	148871672	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
6	149592915	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
6	149592973	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
1	150309096	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
1	150309097	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
1	150309136	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
1	150309507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
1	150309562	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
1	150569864	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0322581
1	150569904	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.027027
1	150570299	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0714286
1	150570362	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0434783
1	150570877	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.136364
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.116279
1	150571304	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.036036
1	150571314	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0377358
1	150571325	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0588235
3	150585385	A->G	+	ENSG00000120742	SERP1	protein_coding	Intergenic	.	.	Alu	0.117647
1	150610848	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.142857
1	150612623	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0454545
1	150612688	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.111111
1	150613114	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.111111
1	150613133	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150613178	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0714286
1	150613179	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0697674
1	150613185	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.119048
1	150617914	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150617918	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.333333
1	150930779	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.133333
1	150931117	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.2
1	150993381	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.0952381
1	150993382	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.2
1	150993446	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.133333
1	150993449	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.125
1	150993486	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.1875
1	150993488	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.125
1	150993491	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.1875
1	150993526	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.117647
1	150993583	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.2
4	151105793	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0740741
4	151105826	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.125
4	151105874	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.210526
4	151108358	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.238095
5	151271819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
5	151271889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
5	151271914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
5	151271955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
5	151271956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	151271996	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
2	151420461	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.307692
2	151420465	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.181818
7	151497060	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.2
7	152404948	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.294118
7	152405901	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152414689	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
2	152675913	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.181818
1	154161502	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.307692
1	154179721	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.08
6	154738064	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.157895
5	154866793	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.5
5	154866806	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.25
1	155559037	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155681529	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	155681537	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.333333
1	155681555	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	155684653	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.125
1	155684714	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.1
1	155684724	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	155684858	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	155850688	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.2
1	156469395	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.272727
1	156471271	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.235294
1	156472911	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.2
6	156946124	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
7	157372998	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.108696
7	157373926	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.166667
7	157373953	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0810811
7	158789417	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1875
7	158789454	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158789468	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.153846
7	158789478	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.272727
6	159734203	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.2
6	159734266	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0526316
6	159735628	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.470588
6	159735634	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.117647
1	167639755	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intergenic	.	.	Alu	0.153846
1	167639756	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intergenic	.	.	Alu	0.153846
2	168728960	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.461538
2	168728962	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.307692
3	169973483	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.142857
5	171409898	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.225
5	171409907	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0512821
1	171492869	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.2
1	171492935	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.6
1	171493732	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.117647
1	171499710	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.133333
3	172053586	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0487805
3	172053692	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	172053766	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172053767	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.166667
3	172179162	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172179191	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.105263
3	172179201	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1
3	172179736	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172179762	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.190476
3	172387056	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.230769
3	172387057	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.384615
1	173858683	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
1	173859719	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
1	173859762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	173859828	A->G	+	.	.	.	Intergenic	.	.	Alu	0.529412
1	173859845	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	173859865	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
1	173859897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
2	173932472	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.1875
2	173936163	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.25
2	173946978	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.142857
2	173946982	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.15
2	173946995	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	174015790	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.307692
1	174016518	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.2
1	175968005	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	175968006	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.454545
1	176064716	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.272727
2	178434185	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.107143
2	178434190	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.333333
2	178434191	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.434783
2	178434213	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.357143
2	178434492	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.342857
2	178434564	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0540541
2	178434935	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.25
2	178435030	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.411765
2	178435031	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.466667
2	178435033	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.1875
2	178435040	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.111111
2	178435041	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.15
2	178435090	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0952381
2	178435096	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0769231
2	178435110	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.258065
2	178435123	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.394737
2	178435129	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.05
2	178435137	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0681818
2	178435138	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.119048
2	178435156	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.355556
2	178435177	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0540541
2	178435236	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.142857
2	178435262	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.214286
2	178435286	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0588235
2	178435289	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.382353
2	178435303	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.176471
2	178435304	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.142857
2	178435315	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0967742
2	178435343	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0714286
2	178438758	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.0666667
2	178438759	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.413793
5	179529143	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
5	179830041	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	180497108	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.272727
3	180917693	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.133333
3	180917797	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.117647
3	180921221	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	180921229	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.26087
3	180921248	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	181240112	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.0526316
5	181240894	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.142857
5	181240912	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.15625
5	181240957	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.142857
3	182797652	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.1
3	182830236	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.133333
2	184628167	A->G	+	ENSG00000170396	ZNF804A	protein_coding	Intergenic	.	.	Alu	0.2
4	184781112	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.233333
4	184781676	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.111111
4	184781677	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.111111
4	184781774	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.117647
4	184781777	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.117647
4	184781806	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.117647
4	184781807	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.117647
3	185799276	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.636364
3	195527232	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.25
3	195527338	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.294118
3	196052895	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.12
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.177419
2	196162715	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0224719
2	196162833	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0222222
2	197491909	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.142857
2	197492070	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	197492071	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.151515
2	197492074	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.322581
3	197953301	A->G	+	ENSG00000182899	RPL35A	protein_coding	Intergenic	.	.	Alu	0.0625
2	200855397	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0888889
2	200856342	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.162791
2	200856343	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0465116
1	202769522	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.142857
1	202769557	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.315789
1	202948852	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.384615
2	203298303	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203298650	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203298651	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203298766	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.545455
2	203298797	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203298914	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203298924	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203298941	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3125
2	203300728	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	203300768	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.115385
2	203300769	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.5
2	203300831	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203300839	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203303233	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203303279	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.173913
2	203303285	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203303321	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.391304
2	203303330	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.130435
2	203303440	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203303441	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.285714
2	203303486	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.277778
2	203303509	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.105263
2	203303510	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.315789
2	203303546	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203303755	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.16129
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.516129
2	203303761	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.121212
2	203303796	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	203303797	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	203303852	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203303964	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203303965	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203304241	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.15
2	203304259	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.961538
2	203304262	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	203304275	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.6
2	203304298	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	203304327	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.222222
2	203304337	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.727273
2	203304444	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.16129
2	203304458	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.451613
2	203304459	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.387097
2	203304471	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.170732
2	203304480	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0555556
2	203304861	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.16
2	203304885	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	203304891	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	203305301	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203305318	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.538462
2	203305363	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203305382	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.136364
2	203305385	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.217391
2	203305391	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.217391
2	203305399	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	203305411	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	203305438	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.282051
2	203305439	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0512821
2	203305447	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
1	204527210	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.25
1	205736233	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.272727
2	216208180	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
2	216208192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
2	216208198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.318182
2	216208869	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
2	216208870	A->G	+	.	.	.	Intergenic	.	.	Alu	0.32
2	216208896	A->G	+	.	.	.	Intergenic	.	.	Alu	0.242424
2	216208938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.366667
2	216208948	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
2	216208953	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
2	216209018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
2	224509316	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.133333
1	225787044	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.666667
1	225787046	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.75
1	226001438	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	226067484	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.0769231
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.5
2	227540001	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.272727
2	233158829	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233158848	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.15
2	233158858	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.111111
2	233159489	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233205571	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.285714
1	235306314	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.285714
1	235318759	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235318772	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.176471
1	235318773	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.470588
1	235826738	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.206897
1	235826820	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.506329
1	235826849	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.02
1	235826871	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0212766
1	235826876	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.020202
1	235826899	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.125
1	235826915	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.110169
1	235826956	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.161765
1	235826962	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0714286
1	235826964	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0784314
1	235827159	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.169231
1	235827161	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.69697
1	235827172	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0701754
1	235827192	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0697674
1	235827195	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.27907
1	235827198	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0697674
1	235827245	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.490566
1	235827247	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.283019
1	235827269	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.254902
1	235827286	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0869565
2	237707312	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.1875
2	237707326	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.166667
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.583333
2	237707358	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.142857
11	778153	A->G	+	ENSG00000255284	AP006621.3	lincRNA	Intron	.	.	Alu	0.636364
11	778176	A->G	+	ENSG00000255284	AP006621.3	lincRNA	Intron	.	.	Alu	0.2
11	778205	A->G	+	ENSG00000255284	AP006621.3	lincRNA	Intron	.	.	Alu	0.583333
1	1735236	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0952381
16	3128928	A->G	-	ENSG00000263072	ZNF213-AS1	antisense	Intron	.	.	Alu	0.105263
17	5487153	A->G	+	ENSG00000167842	MIS12	protein_coding	Intron	.	.	Alu	0.0740741
20	6000555	A->G	+	ENSG00000275632	AL035461.2	lincRNA	Intron	.	.	Alu	0.2
2	9936698	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.190476
2	9936699	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.285714
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.385965
19	11449919	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0340136
19	11449925	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0518519
19	11449931	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0676692
19	11449945	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.130719
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.506494
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.24
19	11449962	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0564516
19	11449984	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.0521739
19	11850766	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.2
19	11850848	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.25
19	11850997	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.181818
19	12003412	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.2
18	12031700	A->G	+	ENSG00000267480	AP001542.3	antisense	Intron	.	.	Alu	0.133333
18	12031703	A->G	+	ENSG00000267480	AP001542.3	antisense	Intron	.	.	Alu	0.1875
18	12031708	A->G	+	ENSG00000267480	AP001542.3	antisense	Intron	.	.	Alu	0.538462
3	14944591	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0496454
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.641509
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.260606
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0903614
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.206522
3	14944643	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0397727
3	14944892	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0945946
3	14944946	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0547945
9	15505118	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.0833333
9	15505133	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.130435
9	15505203	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.151515
19	16079970	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0625
19	16636430	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intron	.	.	Alu	0.157895
19	16636432	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intron	.	.	Alu	0.1
19	16636467	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intron	.	.	Alu	0.368421
19	16636490	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intron	.	.	Alu	0.894737
19	16640046	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.133333
19	16640087	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.181818
14	20451378	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.166667
1	20649508	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.2
1	20649625	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.2
15	24983610	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.357143
15	24983613	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.307692
15	24983646	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.5
15	24983667	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.384615
15	24983668	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.615385
15	24983729	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.142857
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.03125
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0278746
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0471014
1	28510383	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.2
1	28510400	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.230769
10	28523105	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.08
17	28721088	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.0833333
17	28722429	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.0952381
16	30536863	A->G	+	ENSG00000260869	AC002310.4	protein_coding	Intron	.	.	Alu	0.08
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.105263
16	31123773	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.16129
16	31123774	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.290323
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.290323
16	31183140	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.0789474
13	32525035	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.285714
20	35713269	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.075
19	35770755	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intron	.	.	Alu	0.2
19	35770756	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intron	.	.	Alu	0.5
19	36577150	A->G	+	ENSG00000186020	ZNF529	protein_coding	Intron	.	.	Alu	0.125
19	36577162	A->G	+	ENSG00000186020	ZNF529	protein_coding	Intron	.	.	Alu	0.125
9	37510277	A->G	+	ENSG00000234160	AL513165.1	antisense	Intron	.	.	Alu	0.2
19	38844917	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.173913
19	38845288	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.285714
2	38993001	A->G	-	ENSG00000229692	SOS1-IT1	sense_intronic	Intron	.	.	Alu	0.411765
2	38993038	A->G	-	ENSG00000229692	SOS1-IT1	sense_intronic	Intron	.	.	Alu	0.181818
2	38993045	A->G	-	ENSG00000229692	SOS1-IT1	sense_intronic	Intron	.	.	Alu	0.6
3	39408965	A->G	+	ENSG00000168028	RPSA	protein_coding	Intron	.	.	Alu	0.217391
19	39491588	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.285714
19	39491591	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.190476
19	39491610	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.0869565
19	39491689	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.333333
19	39491701	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.263158
19	39491748	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.190476
19	39491790	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.533333
15	41298640	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0292887
15	41298647	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0327869
15	41298706	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0288809
15	41298710	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0257353
15	41298720	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0248756
15	41298725	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.045045
15	41298734	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0583658
15	41298740	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.032
15	41298764	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0443548
15	41298775	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0752688
15	41298784	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0512821
15	41298807	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0440678
15	41298815	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0531915
15	41298816	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.024911
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0944056
15	41299136	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0333333
15	41299144	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.790323
15	41299199	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0251046
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.149798
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.159363
15	41299237	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0234375
15	41299245	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0425532
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.15678
15	41299259	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.027907
15	41300994	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.037037
15	41302238	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.19
15	41302240	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0582524
15	41302285	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0888889
15	41302323	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0909091
15	41302332	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0412844
15	41302347	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0995025
15	41302363	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0904762
15	41302374	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0209205
15	41302387	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0921053
15	41302413	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.076
15	41302414	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0239044
15	41302454	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0669291
15	41305278	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0480769
15	41305286	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.116667
15	41305287	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.135593
15	41305297	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.024
15	41305325	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0504202
15	41305345	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.105263
15	41305361	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.104167
15	41305376	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0828402
15	41305379	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.433962
15	41305405	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0218579
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.460733
15	41305458	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0748663
15	41305459	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.116402
15	41305471	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0454545
15	41305473	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0456853
15	41308828	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.428571
15	41308838	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.5
15	41308896	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.272727
17	41984930	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.3
5	43575669	A->G	-	ENSG00000248092	NNT-AS1	antisense	Intron	.	.	Alu	0.176471
1	44626828	A->G	+	ENSG00000187147	RNF220	protein_coding	Intron	.	.	Alu	0.142857
15	44733235	A->G	+	ENSG00000185880	TRIM69	protein_coding	Intron	.	.	Alu	0.181818
1	44777306	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.1
17	46049506	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.461538
17	46049507	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.307692
19	48256386	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0447761
19	48256515	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0909091
17	48866108	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	Intron	.	.	Alu	0.2
3	50112927	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.166667
3	50112956	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.230769
15	50351358	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.272727
15	50351403	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.181818
15	50351454	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.25
15	50352472	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.166667
15	50352562	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.136364
15	50360993	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	50361105	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
3	52414754	A->G	+	ENSG00000010318	PHF7	protein_coding	Intron	.	.	Alu	0.137931
14	55285279	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.117647
14	55285290	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.2
12	56312844	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.166667
19	57304785	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.35
19	57304790	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.0952381
19	57304836	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.15
19	57304837	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.15
19	57307008	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.176471
19	57307395	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.117647
14	58258252	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intron	.	.	Alu	0.272727
14	58293911	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0545455
14	58295737	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0571429
14	58295740	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.125
14	58295747	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.102564
19	58582393	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.05
19	58582552	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.1
19	58584082	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.166667
19	58584089	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.205882
19	58584102	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.5
19	58584115	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.333333
19	58584206	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0909091
2	61141890	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.291667
2	61141913	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.222222
2	61142040	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.272727
2	61142102	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.25
2	61142643	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.181818
2	61142721	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.181818
2	61142794	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.08
2	61142809	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.157895
17	62004993	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.214286
17	62004996	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.214286
17	62005012	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.384615
17	64783157	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.416667
11	65439993	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0606061
11	65440001	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.075
11	65440055	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.111111
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.244898
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.355932
11	65441385	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0877193
11	65441403	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0350877
11	65441418	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.125
11	65441426	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0416667
11	65441427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0833333
11	65442678	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.232143
17	67355371	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.0769231
10	73778867	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.1875
10	73779402	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.105263
10	73779403	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.111111
10	73779518	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.133333
X	73947010	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0967742
X	73947054	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0425532
X	73947058	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0666667
X	73947071	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.16129
X	73947127	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.166667
7	74882625	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.363636
7	74882628	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.666667
7	74882671	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
16	81030834	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.2
16	81030884	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.285714
16	81030889	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.133333
16	81030898	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.153846
16	81030902	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.583333
16	81030928	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.125
16	81030929	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.2
17	81847816	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.2
15	90075318	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.181818
15	90075321	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.0869565
15	90075422	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.185185
15	90075462	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.28125
15	90075516	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.117647
15	90076524	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.25
11	93734995	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.166667
11	93735426	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.15
11	93735505	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.136364
11	93735523	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.1
14	94053259	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.09375
14	94053348	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.142857
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.384615
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.238095
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.380952
8	98043631	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0425532
8	98044058	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.142857
8	98044071	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0714286
8	98044109	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0625
8	98044110	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.3125
10	98442598	A->G	-	ENSG00000107521	HPS1	protein_coding	Intron	.	.	Alu	0.0606061
12	98597604	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.0588235
12	98597658	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.0454545
12	98597676	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.173913
12	100033607	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.294118
12	100033614	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.0588235
12	100033627	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.0555556
12	100033803	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.25
12	100033804	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.5
7	100320242	A->G	-	ENSG00000214300	SPDYE3	protein_coding	Intron	.	.	Alu	0.272727
10	101787864	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.181818
10	101787865	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.181818
14	102347415	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.615385
14	102347433	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.583333
13	102607643	A->G	+	ENSG00000134900	TPP2	protein_coding	Intron	.	.	Alu	0.176471
14	103682604	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.4
14	103682605	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.2
8	108226291	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intron	.	.	Alu	0.5
4	108623222	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.153846
4	108623264	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.2
10	112449496	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.409091
10	112449589	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.325
10	112449594	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.075
10	112449595	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.15
10	112449632	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.285714
10	112449646	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.157895
10	112449969	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0789474
10	112450101	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0833333
12	118032545	A->G	+	ENSG00000111445	RFC5	protein_coding	Intron	.	.	Alu	0.173913
11	118788940	A->G	-	ENSG00000110367	DDX6	protein_coding	Intron	.	.	Alu	0.2
8	120055921	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intron	.	.	Alu	0.214286
12	121332078	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.25
12	121332091	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.142857
12	121332108	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.642857
12	121332238	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.2
12	122878929	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.166667
7	128527473	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.181818
7	128528011	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.5
7	128528047	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.181818
7	128529007	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.1
7	128529017	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.105263
7	128529077	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.333333
7	128529378	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.176471
7	128529388	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.235294
9	129506678	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.4
9	129506681	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.133333
9	129506703	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.461538
9	129506718	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.380952
9	129506758	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.08
6	137855294	A->G	-	ENSG00000237499	AL357060.1	antisense	Intron	.	.	Alu	0.166667
6	137855327	A->G	-	ENSG00000237499	AL357060.1	antisense	Intron	.	.	Alu	0.545455
5	139282849	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.95
5	139282894	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.0769231
5	139282931	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.210526
8	144974357	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.333333
8	144974897	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.272727
8	144974939	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.266667
4	151103663	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0701754
7	152645818	A->G	-	ENSG00000196584	XRCC2	protein_coding	Intron	.	.	Alu	0.45
7	155004523	A->G	+	ENSG00000273344	PAXIP1-AS1	lincRNA	Intron	.	.	Alu	0.0588235
7	157379623	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intron	.	.	Alu	0.0689655
1	167640601	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.173913
1	167641472	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.142857
1	167641533	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.130435
1	167641542	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0909091
1	167641598	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.26087
1	173864077	A->G	-	ENSG00000234741	GAS5	processed_transcript	Intron	.	.	Alu	0.0909091
2	178433750	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.0434783
5	181240966	A->G	-	ENSG00000204628	RACK1	protein_coding	Intron	.	.	Alu	0.0740741
2	230167167	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.2
2	230167170	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.2
2	233140572	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.307692
2	233140608	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.105263
2	233140670	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.214286
2	233140681	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.3
2	233141311	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.25
2	233141312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.461538
X	299510	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	299540	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	299548	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.483871
X	299581	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	299593	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
X	299605	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	299611	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.16
X	299626	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	299646	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.115385
X	299663	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
X	299678	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.295455
X	299806	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.352941
X	299834	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	299844	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	299877	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.103448
X	299878	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.259259
X	299932	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	299959	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	300135	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	300140	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.151515
X	300735	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	300743	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	300804	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
X	300808	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.116279
X	300833	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.292683
X	300964	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	300965	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.227273
X	301074	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.05
X	301090	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.282609
X	301177	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0681818
X	301185	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.512821
X	301231	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.147541
X	301258	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0298507
X	301263	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.114286
X	301279	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	301364	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	301412	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0566038
X	301507	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	301523	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	301548	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	301730	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	301755	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.277778
X	301791	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	301800	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	301806	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.1
X	301823	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	301826	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.225806
X	301835	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	301887	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.159091
X	301888	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	301900	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.06
X	302450	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.470588
X	302474	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	302631	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	302703	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	302836	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.103448
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.038105
17	516452	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	517658	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.15
11	768369	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	768383	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	768386	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	768387	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	768423	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.461538
11	768437	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	768935	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.2
11	768977	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.266667
11	769388	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	769426	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	769449	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	769453	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	769459	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	769540	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	1663538	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.151515
1	1663560	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0517241
1	1663567	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.362069
1	1663568	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	1663582	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	1663586	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	1663592	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.101449
1	1663609	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.158537
1	1663635	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.126582
1	1663638	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0759494
1	1663741	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	1664099	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.195876
1	1664100	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0927835
1	1664101	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.153061
1	1664147	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.755102
1	1729448	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.142857
1	1729449	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.4
1	1729477	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.692308
1	1729651	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.263158
1	1729665	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.764706
17	1780278	A->G	-	ENSG00000186532	SMYD4	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	1780827	A->G	-	ENSG00000186532	SMYD4	protein_coding	three_prime_utr	.	.	Alu	0.4
8	1782325	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	1799241	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	2230212	A->G	-	ENSG00000214367	HAUS3	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	2418312	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.277778
17	2418394	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.25
17	2418411	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	2434482	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	2434833	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	2434886	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.4
7	2434974	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	2434983	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	2447653	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.2
4	2839964	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2840166	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	2906198	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0961538
X	2906205	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.163636
X	2906210	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0517241
X	2906213	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.4
X	2906270	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.211538
X	2906276	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.607843
X	2906302	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.216667
X	2906312	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.047619
X	2906313	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.269841
X	2906314	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0655738
X	2906319	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0416667
X	2906325	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0444444
X	2906336	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.304348
X	2906344	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.295775
X	2906392	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.860759
X	2906393	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.961538
X	2906414	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0487805
X	2906415	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.1625
X	2906421	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.232143
X	2906433	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0980392
X	2906847	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0235294
X	2906865	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0638298
X	2906875	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.542169
X	2906892	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0729167
X	2906893	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0210526
X	2906927	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.125
X	2906938	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.2
X	2906942	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.134146
X	2906944	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.975904
X	2906947	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.878049
X	2907017	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	2907034	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.680556
X	2907035	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.408451
X	2907078	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.914286
X	2907083	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.960526
4	2938358	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.680412
4	2938364	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.107843
4	2938371	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	2938372	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0470588
4	2938396	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.037037
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.132653
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.211538
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.108911
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.488372
4	2938438	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0375
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0833333
4	2938620	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.109091
4	2938634	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0392157
4	2938637	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.18
4	2938638	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.18
4	2938644	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.756098
4	2938670	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.60274
4	2938673	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.027027
4	2938682	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0246914
4	2938686	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.1
4	2938703	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.105882
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.121212
4	2938711	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0857143
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.415094
4	2938740	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0215054
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.131868
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.120482
4	2938759	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0361446
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	3813836	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.823529
20	3824811	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	3824812	A->G	+	ENSG00000125843	AP5S1	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	3867431	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0487805
20	3867455	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.184211
20	3867485	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.135135
20	3867511	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.311111
20	3867516	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0681818
20	3867521	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3867524	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3867531	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3867545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.210526
20	3867567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	3867578	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.180328
20	3868579	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3868754	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.545455
20	3868756	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	3868801	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3868834	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.285714
20	3868841	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3869312	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3869487	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.294118
20	3869489	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3869544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.45
20	3869554	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.116279
20	3869566	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.145833
20	3869674	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3869685	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
20	3869722	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.428571
20	3869734	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.115385
20	3869744	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.454545
20	3869748	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3869785	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3869814	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.031746
20	3869827	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0294118
20	3869840	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.151899
20	3869848	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.056338
20	3869866	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.322581
20	3869867	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.262295
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.266667
20	3870562	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.857143
20	3870567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0465116
20	3870574	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.121951
20	3870586	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0571429
20	3870961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3870974	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.16
20	3870980	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0416667
20	3870981	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3870985	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0816327
20	3870998	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.428571
20	3871010	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	3871020	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.134615
20	3871046	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.047619
20	3871064	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0888889
20	3871090	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0638298
20	3871115	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0793651
20	3871116	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.106061
20	3871142	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
20	3871143	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0701754
20	3871144	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.103448
20	3872176	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3872178	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0338983
20	3872182	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.380952
20	3872184	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	3872185	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0483871
20	3872206	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0377358
20	3872207	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.132075
20	3872211	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.433962
20	3872214	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.196078
20	3872278	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
20	3872279	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.09375
20	3872280	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	3872327	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3872331	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3872353	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.44
20	3872358	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.183673
20	3872363	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	3872377	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.08
20	3872413	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0576923
20	3872420	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.152174
20	3873309	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.138889
20	3873320	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.05
20	3873333	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0588235
20	3873373	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0540541
20	3873381	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	3873387	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0571429
20	3873459	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3873484	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3873516	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.103448
20	3875200	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0540541
20	3875295	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.047619
20	3875359	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	3928499	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.034188
20	3928501	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0263158
20	3928513	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.102804
20	3928514	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0560748
20	3928532	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0636364
20	3928536	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0963855
20	3928544	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0943396
20	3928568	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3928576	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3928593	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.215054
20	3928672	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.370968
20	3928884	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.232
20	3928886	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.046875
20	3928888	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0333333
20	3928889	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.027027
20	3928916	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0923077
20	3928931	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.425197
20	3928934	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.277311
20	3928945	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0967742
20	3928946	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.078125
20	3928954	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
20	3928960	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.373984
20	3929016	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.036036
20	3929017	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0267857
20	3929019	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0583333
20	3929020	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0944882
20	3929026	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0310078
20	3929027	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0737705
20	3929051	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0428571
20	3929065	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0441176
20	3929066	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.226277
20	3929073	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.365217
20	3929074	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.059322
20	3929136	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0247934
20	3929233	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
20	3929282	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
20	3929292	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.130719
20	3929317	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.308571
20	3929331	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0338983
20	3929347	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0429448
20	3929377	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.266234
20	3929388	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.637584
20	3929390	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.163265
20	3929392	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0212766
19	4653211	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.4
19	4653288	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	4653661	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.6
19	4654499	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4654525	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	4654539	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	4654542	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4654585	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	4750599	A->G	-	ENSG00000103199	ZNF500	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	4838860	A->G	-	ENSG00000105355	PLIN3	protein_coding	three_prime_utr	.	.	Alu	0.038961
7	5389673	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.2
7	5389674	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.3
7	5389681	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.2
19	5909553	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	5909554	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.1
19	5909573	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.1
1	6222340	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.2
1	6222341	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.3
1	6223200	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.125
1	6223245	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.3
1	6223246	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.3
1	6522089	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.04
1	6522498	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.123288
1	6523012	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	6523323	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.122449
1	6523335	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0363636
8	6643351	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.210526
8	6643364	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	6643365	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	6643430	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.5625
8	6643431	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	7095403	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	8269931	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.113636
17	8269934	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0697674
17	8269978	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	8269981	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.257143
17	8269982	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0857143
17	8270007	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	8270039	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	8270058	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	8270078	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	8270098	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0408163
17	8270106	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.0384615
11	8686275	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.192308
11	8686287	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0731707
11	8686293	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.415094
11	8686296	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0847458
11	8686348	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	8686360	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0972222
11	8686361	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.118421
11	8686370	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.105769
11	8686396	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0336134
11	8686397	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.025
11	8686411	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0232558
11	8686414	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0327869
11	8687235	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.490909
11	8687238	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0851064
11	8687242	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
11	8687252	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.184211
11	8687278	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.62069
11	8687279	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	8687342	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.388889
11	8687344	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.529412
11	8687698	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	9036420	A->G	-	ENSG00000142583	SLC2A5	protein_coding	three_prime_utr	.	.	Alu	0.2
16	9104214	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	9106175	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	9106176	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0322581
16	9106379	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	9106380	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.038835
16	9106454	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.072
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.129771
16	9106547	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0224719
16	9106548	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.235955
16	9108458	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0246914
16	9110782	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	9110818	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	9110861	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	9110862	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	9110876	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	9110887	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0638298
16	9110888	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	9110891	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.1
16	9110918	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	9110927	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	9110931	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.106383
16	9110944	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	9110970	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	9110979	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0253165
16	9111026	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0677966
1	9265729	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9266895	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.12
1	9266898	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.267606
1	9266901	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0746269
1	9266924	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0724638
1	9266938	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	9267000	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	9267009	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.128205
1	9267029	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.031746
1	9267049	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0561798
1	9267054	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0795455
1	9267081	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	9267082	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.049505
1	9267987	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	9267988	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.147059
1	9268015	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	9268023	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	9268033	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.097561
1	9268036	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0731707
1	9268043	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9268044	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.128205
1	9268047	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	9268061	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.243902
1	9268141	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0517241
1	9268154	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.245902
1	9268164	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.128571
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.59322
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.431034
1	9268196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0816327
1	9271016	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0964912
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.264957
1	9271041	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.05
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	9271071	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	9271117	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	9271143	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	9271168	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	9271195	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.162791
1	9271196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0561798
19	9561636	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	9561684	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0757576
19	9561756	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0566038
19	9561760	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0943396
19	9562232	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	9562243	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.257143
19	9562267	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.325
19	9562305	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.3
19	9562313	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.344828
19	9562431	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	9562436	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	9563675	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.056338
19	9564378	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	9583048	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	9583049	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	9647157	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	9647206	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	9647768	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.2
19	9648482	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	9648491	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	9648511	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	9648529	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.185185
19	9650706	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	9650786	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	9750151	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.0540541
11	9750152	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.108108
11	9750221	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	9750230	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.046875
1	9983305	A->G	+	ENSG00000241326	AL603962.1	sense_intronic	three_prime_utr	.	.	Alu	0.3
3	10101486	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	10101515	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	10101552	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	10101560	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	10101586	A->G	+	ENSG00000144554	FANCD2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	10150924	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.42069
3	10150933	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.136054
3	10150958	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.15493
3	10151010	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0612245
3	10151020	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0594059
3	10151022	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.020202
3	10151033	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0465116
3	10151060	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0454545
3	10151063	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	10151069	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.179487
3	10151127	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.172414
3	10151132	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	10151141	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	10151143	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	10151827	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	10152113	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	10152143	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	10152158	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.1
3	10152182	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.448276
3	10152190	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10457219	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.152174
1	10457233	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.097561
1	10457243	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	10457249	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	10457250	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	10457256	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	10457257	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10457278	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	10457295	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	10457323	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	10457324	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	10457326	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	10457455	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	10457456	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10457470	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	10457481	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	10457490	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	10457501	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.1
1	10457507	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	10457510	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10457556	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.48
1	10457566	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10457578	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.25
1	10457591	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	10457596	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.392857
1	10457602	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.32
1	10457615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	10457616	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10457631	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	10457935	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	10457941	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0327869
1	10457995	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0724638
1	10458015	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.05
1	10458631	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.137931
1	10458663	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	10458667	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	10458676	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	10458699	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0882353
1	10458991	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10459007	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.25
1	10459091	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10459817	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	10459830	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	10459831	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.16129
1	10459855	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0731707
1	10460000	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460010	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	10460082	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10460088	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10460096	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460097	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460117	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10460123	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.55
1	10460133	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.4
1	10460145	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	10460158	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	10460162	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	10460169	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	10460176	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	10460201	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	10460212	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.137931
1	10460239	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.615385
1	10460321	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.5
1	10460326	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	10460393	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	10460448	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.08
1	10460615	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	10460626	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	10460627	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	10460658	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.206897
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	10460678	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.44
1	10460707	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	10460708	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	10460710	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.173913
1	10460762	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.352941
1	10461037	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.148148
1	10461047	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	10461069	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10461073	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.137931
1	10461105	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.192308
1	10461113	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.28125
1	10461115	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10461143	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	10461181	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10461203	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.129032
17	10673230	A->G	-	ENSG00000133028	SCO1	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	10926721	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.5
16	10926741	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	10928471	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.3
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.159091
16	10931232	A->G	+	ENSG00000182108	DEXI	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11145996	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.171429
19	11146013	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.258065
19	11146021	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.030303
19	11146026	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0447761
19	11146049	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.269841
19	11146509	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	11146522	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	11146584	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	11146643	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	11146653	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	11146832	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.265306
19	11146833	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.102041
19	11146958	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	11146968	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	11146972	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.1
19	11146997	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.12
19	11147028	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.344828
19	11147041	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.24
19	11449574	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0366972
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.70339
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0338983
19	11449646	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0695652
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.14433
19	11449669	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.030303
19	11449682	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0471698
19	11449715	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0396825
19	11449718	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	11449720	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0775194
19	11449769	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0361446
19	11449778	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0264901
19	11449797	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0428571
19	11450478	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.05
16	11834879	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	11834956	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.04
16	11834989	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.46
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0793651
16	11835016	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0273973
16	11835030	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0394737
16	11835067	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	11835094	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.227273
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.320755
16	11835320	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	11835346	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.16
16	11835590	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	11835626	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.047619
8	11842699	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.037037
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0344828
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0526316
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	11842775	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.121212
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.08
8	11842812	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.08
8	11843117	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.09375
8	11843128	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.348837
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.162791
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.382979
8	11843228	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	11843834	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	11843848	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	11843869	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	11843920	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	11843945	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.031746
8	11843949	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.413793
8	11843964	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0491803
8	11843970	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.05
8	11843971	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0491803
8	11843976	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0384615
8	11843981	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.371429
8	11843995	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0425532
8	11844000	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	11913593	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.846154
19	11913663	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	11914195	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11914273	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.363636
10	12121033	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.130435
10	12121034	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.222222
10	12121127	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	12121175	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0625
10	12121177	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0625
10	12121574	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	12122436	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	12663134	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	12663198	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.15
16	12663342	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	13772565	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	13772567	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.909091
19	13772573	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	13772574	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.578947
19	13772582	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	13772617	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	13772620	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	13772662	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.529412
19	13772665	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.828571
19	13772678	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	13772707	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	13772713	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	13772717	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	13772734	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.354839
19	13772740	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	13773060	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	13773071	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	13773078	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.547619
19	13773083	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0638298
19	13773109	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0925926
19	13773113	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0925926
19	13773124	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	13773148	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	13773154	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.102564
19	13773174	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	13773189	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13773192	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.282051
19	13773201	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
19	13773206	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	13773209	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	13773218	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	13773260	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	13773269	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.409091
19	13773270	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.681818
19	13773282	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	13773288	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	13773376	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	13773384	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	13773385	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	13773445	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	13773477	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	13773494	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	13773525	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	13773531	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	13773532	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.78125
19	13773570	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	13773594	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.666667
19	13773604	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.885714
19	13773605	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.588235
19	13773701	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	13773711	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	1
19	13773727	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	13773758	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	13773775	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	13773787	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	13773797	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	13773855	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.448276
19	13773911	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	13773913	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.138462
19	13773925	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.144737
6	13787968	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	13787990	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.125
6	13788021	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.108108
6	13788056	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	13788062	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	13788065	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	13789144	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	13789155	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	13789218	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	13790590	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	13790656	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	13790725	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	14734255	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
19	14734257	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.354167
19	14734269	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	14734293	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	14734311	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.540541
19	14734324	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.125
19	14734645	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	14734646	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	14734651	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	14734660	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	14734664	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
19	14734669	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.225
19	14734699	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.09375
19	14734700	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	14734702	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.677419
10	14907959	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0833333
10	14907977	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	14907978	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	15072149	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	15072340	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.636364
3	15072386	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.3
16	15409211	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.2
16	15409262	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.2
16	15700116	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	15700166	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	15700334	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
4	15850254	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.0298507
19	16550675	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	16550680	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	16551847	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
19	16551893	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	16552016	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.140351
19	16552017	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0754717
19	16552431	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0701754
19	16552534	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	16552605	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	16763026	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.611111
X	16763032	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.3
X	16763033	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.263158
X	16763492	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	16763514	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16764764	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	16764788	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.1
22	17110243	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	1
22	17110269	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.08125
22	17110351	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	17110367	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0420168
22	17110377	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.206107
22	17110383	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0227273
22	17110591	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.241379
22	17110600	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.244898
22	17110647	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	17110706	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0526316
22	17110752	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0384615
22	17110778	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.188525
22	17113328	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	17113329	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.151515
22	17113332	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.507463
22	17113334	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	17113449	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.156863
22	17113459	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.264151
17	17186598	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.25
17	17186612	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.25
17	17186661	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.113636
17	17189282	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	17287260	A->G	+	ENSG00000160117	ANKLE1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
9	17299149	A->G	+	ENSG00000044459	CNTLN	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	17344729	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.134831
7	17344730	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.613636
7	17344734	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.11236
7	17344769	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	17344771	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.188406
7	17344795	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0641026
7	17344810	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0675676
7	17344813	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.369231
7	17344816	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.447761
7	17344838	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0322581
7	17344890	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.35
7	17344903	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.15
7	17345062	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.157895
7	17345106	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	17345139	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0697674
7	17345150	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.252427
7	17345154	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0588235
7	17345155	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0761905
7	17345168	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0438596
7	17345194	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.159091
7	17345208	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.206897
7	17345256	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.155172
7	17345258	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.267857
7	17345263	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17626094	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	17626143	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	17627749	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17627817	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.2
22	17703076	A->G	+	ENSG00000099968	BCL2L13	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	17801196	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.392857
4	17801201	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	17801204	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.586207
4	17801225	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	17801244	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.473684
4	17801267	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801306	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801307	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.583333
4	17801308	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	17801317	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.125
4	17801333	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0540541
4	17801353	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.212121
4	17801356	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.405405
4	17801359	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	17801386	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	17801394	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0652174
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.847826
4	17801936	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.727273
4	17801939	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.421053
4	17801945	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.097561
4	17801981	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.219512
4	17801991	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0888889
4	17801993	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	17802039	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.422222
4	17802050	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0857143
4	17802058	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17803060	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.04
4	17803087	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0377358
4	17803097	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	17803112	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.08
4	17803117	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.212121
4	17803162	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.130435
4	17803224	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.15
4	17803229	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0652174
19	17825712	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	17826379	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0967742
22	18088511	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	18088572	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0784314
22	18088577	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	18088579	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	18088593	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0508475
22	18088602	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.196078
22	18088603	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.211538
22	18088608	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0350877
22	18088655	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	18088665	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.225806
22	18088691	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0597015
22	18088708	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	18088711	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0697674
22	18089806	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.259259
22	18089831	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.323529
22	18089884	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.15625
22	18089909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.621622
22	18089962	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.125
22	18089963	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.28125
22	18089964	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.34375
22	18089976	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.121212
17	18272871	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.125
17	18272873	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.192308
17	18272927	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	18272928	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.1
17	18274164	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18364359	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	18364412	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.259259
19	18364413	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18364467	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.121951
19	18364535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	18365396	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.291667
19	18365417	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	18365422	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
19	18365429	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.228571
19	18365442	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	18365443	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	18365460	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	18365469	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.108108
19	18365472	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	18365482	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	18365484	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.375
19	18365515	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18365524	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	18365532	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	18365552	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18365605	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0793651
19	18365606	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	18365618	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	18366519	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.795455
19	18366527	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	18366535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.220339
19	18366545	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.031746
19	18366574	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0298507
19	18366575	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0597015
19	18366588	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.08
19	18366597	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
19	18366600	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.377358
19	18366610	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.16
19	18366636	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.16
19	18366651	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.7
19	18366732	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18366876	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	18366892	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	18366898	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.175
19	18366899	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	18366943	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.122449
19	18366951	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.134615
19	18366990	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.4
19	18366993	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	18367009	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	18367041	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.225806
19	18367049	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.615385
19	18367091	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.30303
19	18367105	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
19	18367111	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	18367113	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	18367958	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	18367966	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	18368012	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.355556
19	18368018	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
19	18368048	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	18368074	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	18368075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.431818
19	18368291	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	18368319	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	18368360	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	18487695	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	18487707	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	18487828	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	18487867	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.314286
20	18488404	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.318182
20	18488410	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	18488443	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.190476
20	18488498	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	18488533	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	18488538	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	19215745	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	19215756	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	19215807	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	19215811	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.08
1	19215816	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.26087
1	19215921	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19216127	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	19216137	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19216185	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.27027
1	19216753	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	19216755	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	19216759	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	19216788	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.1
1	19216793	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	19216819	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	19216855	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	19216862	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	19216866	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	19216869	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	19216962	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	19216963	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	19216965	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.5
1	19216971	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.48
1	19217282	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	19217289	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	19217291	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	19217303	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	19217304	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	19217356	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.55
1	19217385	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	19217401	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	19217405	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.32
1	19217470	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	19217479	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.319149
1	19258999	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	19259025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.414286
1	19259961	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.084507
1	19259964	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.3375
1	19260007	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.476744
1	19260025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0235294
1	19260026	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0813953
1	19260038	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0652174
1	19260047	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0277778
13	19672201	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	19672219	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.568627
13	19672245	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0816327
13	19672262	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.368421
13	19672378	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.097561
13	19672866	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0576923
13	19672883	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.316667
13	19672884	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.209677
13	19672889	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0819672
13	19672935	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.211538
13	19672976	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.193548
13	19673001	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	19680684	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	19680702	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	19681647	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	19682971	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.2
19	19683066	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.375
19	19683067	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.470588
16	19702767	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.15625
19	19792233	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.652174
19	19792260	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.130435
19	19792298	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.823529
3	20170227	A->G	-	ENSG00000129810	SGO1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	20198237	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	20198253	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.125
19	20198261	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.25
19	20198270	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	20198662	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	20198688	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.1
19	20199511	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	20199583	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.208333
10	20284282	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.2
10	20286764	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.214286
10	20286781	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	20286805	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	20544006	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.380952
19	20544033	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.478261
19	20544092	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.611111
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.144737
22	20890638	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0789474
22	20890954	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.1
22	20890964	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	21119172	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.1
19	21119176	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	21119212	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	21119217	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0882353
19	21119232	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.128205
19	21119241	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	21119256	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	21119281	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.205882
19	21119282	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.114286
19	21119291	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.108108
19	21119296	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.538462
19	21119317	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21119322	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.114286
19	21120061	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.344828
19	21120135	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	21120141	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21120142	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.315789
19	21120146	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	21120159	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21120181	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21120207	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21120208	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	21120214	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.6
19	21120231	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.380952
19	21120264	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21120287	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	21121106	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0487805
19	21121112	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0697674
19	21121118	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	21121157	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0857143
19	21121165	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21122498	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	21184141	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	21184185	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	21184189	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.125
19	21184194	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	21184265	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	21184285	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	21184291	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.24
19	21184295	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21184299	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	21185530	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.423077
19	21185538	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	21185564	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	21185626	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	21185663	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.411765
19	21189966	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21189968	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21190124	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21291622	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	21291680	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.5625
19	21291699	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	21291702	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21291708	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.1
19	21292055	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	21292092	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	21292099	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.333333
13	21374317	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0714286
13	21374353	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.109589
13	21374356	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.195122
13	21374363	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.785714
13	21374428	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.039604
13	21374430	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0283019
13	21374431	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0377358
13	21374436	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.045045
13	21374437	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.307018
13	21374438	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.401869
13	21374439	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.174757
13	21374462	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0588235
13	21374485	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0384615
13	21374486	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.103896
13	21374507	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0933333
13	21374508	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.123288
13	21374516	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.235294
13	21374889	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.106383
13	21374899	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0714286
13	21374908	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.261905
13	21374913	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0731707
13	21374916	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.243902
13	21374945	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0235294
13	21374954	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0631579
13	21374966	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.02
13	21374968	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.401961
13	21375012	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.198276
13	21375022	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.630631
13	21375026	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.261682
13	21375052	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0485437
13	21375058	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.076087
13	21375072	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0485437
14	21460463	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	21460473	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.75
14	21460687	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.16
14	21460692	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.346154
14	21460742	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0392157
14	21460751	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.322581
14	21460752	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	21460781	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.097561
14	21460801	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0857143
14	21460885	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.583333
14	21460886	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
14	21497661	A->G	+	ENSG00000092203	TOX4	protein_coding	three_prime_utr	.	.	Alu	0.2
18	21631204	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.428571
18	21631247	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
18	21631259	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.130435
18	21631269	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
18	21631272	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.448276
18	21631668	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
18	21632036	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	21632197	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.25
18	21632301	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
18	21632306	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
18	21632312	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.116279
18	21632339	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
18	21632352	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.193548
18	21632380	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21805298	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	21805352	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	21805364	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21805381	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	21805428	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.16129
19	21806242	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	21806260	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	21806265	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.05
19	21806358	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	21806359	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21806360	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21806437	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21806438	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21806440	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	22253769	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	22253776	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.09375
8	22253833	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	22253856	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.210526
16	22285539	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.318182
16	22285617	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0925926
16	22285915	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	22285974	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	22288377	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.2
18	23296403	A->G	-	ENSG00000134490	TMEM241	protein_coding	three_prime_utr	.	.	Alu	0.1
18	23296417	A->G	-	ENSG00000134490	TMEM241	protein_coding	three_prime_utr	.	.	Alu	0.105263
18	23296430	A->G	-	ENSG00000134490	TMEM241	protein_coding	three_prime_utr	.	.	Alu	0.25
19	23338809	A->G	-	ENSG00000167232	ZNF91	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	23388781	A->G	-	ENSG00000168434	COG7	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	23465260	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	23465274	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	23465684	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	23465858	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	23672865	A->G	+	ENSG00000166847	DCTN5	protein_coding	three_prime_utr	.	.	Alu	0.25
16	23673315	A->G	+	ENSG00000166847	DCTN5	protein_coding	three_prime_utr	.	.	Alu	0.5
16	23673381	A->G	+	ENSG00000166847	DCTN5	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	23920547	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	23920593	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	23920675	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	23921042	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	23921125	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.3
19	23921216	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	23921221	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.25
3	23921898	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	23922079	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	23922106	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.681818
3	23922123	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	24000272	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0816327
2	24000289	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.147541
2	24000297	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	24000377	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	24000381	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	24000382	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	24000383	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	24000384	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	24000386	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.139535
2	24000395	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.075
2	24000444	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	24000483	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	24001170	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	24001173	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	24001241	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	24001264	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.178571
2	24001267	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	24001772	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	24001863	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	24002136	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24002173	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	24002180	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	24002243	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	24002249	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	24002297	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	24002509	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	24002510	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	24002525	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	24002565	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.15
2	24002575	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	24002584	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	24002590	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.26087
2	24002593	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	24002639	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	24002644	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	24002671	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	24002672	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.4
2	24002678	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.55
2	24002684	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	24004401	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	24077103	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0304183
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0458167
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0437262
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.058104
X	24077249	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0266667
X	24077252	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0201613
X	24077266	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.033557
14	24124938	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	24572507	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.027027
22	24572529	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0298507
22	24572543	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
22	24572562	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.03125
22	24572605	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.188406
22	24572606	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.1
22	24572607	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.126761
22	24572609	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.084507
22	24572610	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0447761
22	24572611	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
22	24572614	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0483871
22	24572634	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0344828
22	24572640	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0289855
22	24572646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	24572650	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.046875
22	24572667	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.147059
7	25120224	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0930233
7	25120358	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	25120359	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	25120899	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.1
7	25120999	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0285714
7	25121041	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	25121042	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0491803
7	25121363	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	25121380	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0454545
7	25121805	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
7	25121815	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0307692
7	25121818	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0294118
7	25121844	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	25121864	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0266667
20	25446245	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
20	25446269	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.102041
20	25446270	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0612245
20	25447165	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
20	25447179	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.205882
20	25447181	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
20	25447658	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.307692
20	25447672	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
20	25447951	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.227273
20	25447952	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.195122
20	25447988	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
20	25448010	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.184211
20	25448088	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.138889
22	25725098	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.21875
22	25725110	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.323529
22	25725683	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.4375
6	25986307	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	25988712	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.25
22	26525285	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	26876331	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	26876344	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	26876353	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	26876354	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	26876397	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	27312844	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
17	27312845	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	27312985	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0614035
17	28327206	A->G	+	ENSG00000109084	TMEM97	protein_coding	three_prime_utr	.	.	Alu	0.0307692
1	28335171	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28335594	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28335666	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	28335688	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.75
1	28335701	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	28335702	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	28335742	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.647059
1	28335743	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.352941
1	28335770	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28497875	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	28498819	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28498825	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.175
1	28498828	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	28498858	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.304348
1	28498869	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0816327
1	28498878	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0408163
1	28498884	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	28498887	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	28498892	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.05
1	28498903	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0810811
1	28498906	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	28498907	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.128205
1	28498918	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	28498921	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.162162
1	28498953	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	28498954	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	28498974	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	28498993	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.12
1	28499025	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	28499200	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	28499205	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.08
1	28499248	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.321429
1	28499269	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.526316
1	28499275	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	28499503	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.151515
1	28499519	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	28499541	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.075
1	28499556	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	28499573	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.186047
1	28499580	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	28499602	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	28499618	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	28499629	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.131579
1	28499666	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	28499678	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.55814
16	28965618	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.08
16	29665079	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12069
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.221207
16	29665119	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0246305
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.165635
16	29665148	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0337423
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137725
16	29665184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0616883
16	29665185	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.183871
16	29665189	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0862355
16	29665194	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0490909
16	29665216	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.029484
16	29665230	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0388128
16	29665239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0458221
16	29665256	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0789474
16	29665290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0360825
16	29665299	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.219761
16	29665308	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.20711
16	29665317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0379939
16	29665318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125567
16	29665325	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0286533
16	29665330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0858311
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0210084
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0632911
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0997151
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.67507
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.102339
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.134831
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.189189
16	29667575	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0439276
16	29667577	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.230971
16	29667599	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0220386
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105714
16	29667611	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0809399
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.159898
16	29667615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.107692
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.161954
16	29667617	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0631579
16	29667618	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0238095
16	29667620	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0238727
16	29667625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0469613
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0657534
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.140921
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0899471
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0716113
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117207
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0275689
16	29667696	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0216867
16	29667697	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0405063
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0343137
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.13172
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0815451
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0548523
16	29667791	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.026087
16	29667796	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0396476
16	29668212	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.164
16	29668220	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0442478
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.134731
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.239645
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.396923
16	29668275	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0421348
16	29668289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0236842
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.149457
16	29668292	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0361111
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0915254
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.254464
16	29668315	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0634328
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.269373
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.580292
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.282609
16	29668329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0268456
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.141304
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0458333
16	29668486	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0281124
16	29668493	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0396825
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.143426
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.488636
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.244361
16	29668529	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0763052
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.171206
16	29668539	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0702479
16	29668541	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0720339
16	29668564	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0564516
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.519651
16	29668568	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0591133
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.13089
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29668633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0309278
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12766
16	29668657	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.147619
16	29668670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0412844
16	29668682	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0235294
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0705882
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.102564
16	29668710	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.257426
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0761589
16	29668713	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.184466
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0391459
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0390071
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0573477
16	29668918	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0326797
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.600671
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.287197
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.289062
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.175299
16	29668991	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0290456
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0995671
16	29668998	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0622222
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.294355
16	29669005	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0551181
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.351916
16	29669030	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0892857
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.114865
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.14966
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.045614
16	29669069	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.100346
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113712
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.038961
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0524017
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.148515
16	29669241	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.210526
16	29669245	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0655738
16	29669258	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.132353
16	29669266	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	29669279	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.178947
16	29669281	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0315789
16	29669301	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29669302	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0980392
16	29669303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.326733
16	29669306	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.27
16	29669319	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.202703
16	29669327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.21978
16	29669331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.42268
16	29669341	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.180851
16	29669359	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.031746
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0280374
16	29669384	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0347826
16	29669386	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29669398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0650407
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.202797
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.349462
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.903226
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0590909
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0986547
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.413636
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.665354
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0882353
16	29669616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	29669624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.644444
16	29669625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.565217
16	29669630	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	29669660	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	29669670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.774194
16	29669678	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.428571
16	29669679	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.657143
16	29669681	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29669690	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	29669719	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29669755	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.62069
16	29669756	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.607143
16	29669765	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.206897
16	29669782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137931
16	29669797	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.129032
16	29669817	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29669821	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.138889
16	29669826	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.108108
16	29669831	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669859	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0491803
16	29669866	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.031746
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	29669948	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0351759
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0738916
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0574163
16	29669977	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0546218
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.325203
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.137339
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0661765
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.281369
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0418251
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0874525
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0338462
16	29670103	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0285714
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0615385
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.032419
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.284337
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.375303
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0665025
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0467532
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.135417
16	29670186	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0234742
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0431818
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.113872
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.144
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.298597
16	29670244	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0401606
16	29670288	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0204499
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.238477
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.074
16	29670303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0219561
16	29670305	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.022869
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0739857
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.044335
16	29670327	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0290828
16	29670328	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0577778
16	29670329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0374449
16	29670331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0218818
16	29670333	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29670338	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0220049
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0380711
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0241935
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.213816
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.10231
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.102473
16	29670395	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0507246
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0483871
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166102
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0336134
16	29670471	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0330189
17	30186001	A->G	+	ENSG00000126653	NSRP1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	30531666	A->G	-	ENSG00000261459	AC002310.5	protein_coding	three_prime_utr	.	.	Alu	0.125
22	30662624	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0697674
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.108108
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.503401
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0849057
8	30678499	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0733945
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.118421
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.150376
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0461538
8	30678967	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.023622
8	30679027	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.123288
8	30679037	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0254237
8	30679049	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0642857
8	30679066	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.108844
8	30679067	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0204082
8	30679086	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.338346
8	30679089	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0992366
17	30783451	A->G	-	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.0701754
14	31095558	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.315789
14	31095566	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.368421
14	31095602	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.352941
14	31095851	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	31095882	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	31095883	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	31431038	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	31431051	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	31431089	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.947368
11	31431120	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	31431131	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	31431147	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.125
11	31431149	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	31431200	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	31431288	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	31447255	A->G	-	ENSG00000203546	AL139353.1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	31447256	A->G	-	ENSG00000203546	AL139353.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	31447258	A->G	-	ENSG00000203546	AL139353.1	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	31447576	A->G	-	ENSG00000203546	AL139353.1	protein_coding	three_prime_utr	.	.	Alu	0.2
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0555556
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0555556
18	32068976	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0666667
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.241379
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.225806
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.130435
18	32069039	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0851064
18	32069040	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0666667
18	32069054	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.121951
18	32069081	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.05
18	32069083	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.05
18	32069109	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0571429
18	32069110	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0882353
18	32069121	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
18	32069133	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32069140	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.24
18	32069158	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.15
18	32070141	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.114286
18	32070144	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0857143
18	32070167	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.115385
18	32070206	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.147059
18	32070338	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0444444
18	32070393	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.1
18	32070410	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0454545
18	32070418	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0731707
18	32070423	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0465116
18	32070432	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0434783
18	32070433	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0425532
18	32070445	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.06
18	32070447	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0612245
18	32070766	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.137931
18	32070805	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0869565
18	32070808	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.177778
18	32070809	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0454545
18	32070870	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.181818
18	32070924	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0588235
18	32070965	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32070966	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.102564
18	32071300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0588235
18	32071334	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0246914
18	32071377	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0229885
18	32071395	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.060241
18	32071399	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0361446
18	32071921	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0909091
18	32071923	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32071927	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.172414
18	32072080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.097561
18	32072090	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.097561
18	32072093	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
18	32072094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.214286
18	32072116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.122807
18	32072156	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.264151
1	32176027	A->G	+	ENSG00000250135	AL049795.2	sense_intronic	three_prime_utr	.	.	Alu	0.0408163
2	32307656	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	32307672	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.15625
2	32307673	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	32307740	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	32307741	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	32307771	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	32307780	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	32307809	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	32307818	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	32307822	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32308166	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	32308171	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	32308239	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	32308249	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.5
2	32308464	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	32308485	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.588235
2	32308527	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.391304
2	32308528	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	32308549	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	32308558	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32308592	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.241379
2	32308593	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.6
2	32308610	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.125
2	32308638	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.108108
2	32308658	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.05
2	32310622	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	32310623	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32310677	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	32310678	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.178571
2	32310679	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.37037
2	32310728	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	32310767	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.340909
2	32310788	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	32310796	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.152174
2	32310804	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	32310831	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	32310833	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0576923
13	32399024	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.115385
13	32399051	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
13	32399052	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.114286
13	32399063	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.333333
13	32399996	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.296296
13	32400020	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.115385
13	32400038	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.294118
13	32400048	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	32603916	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.263158
11	32604141	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.6
11	32604142	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	32604154	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.4
11	32604186	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.12
11	32604223	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.190476
11	32604263	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.529412
11	32604290	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	32604371	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.09375
11	32604373	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.09375
11	32604379	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	32682314	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	32682323	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	32682327	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	32682495	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	32682518	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.08
1	32682595	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	32682613	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	32682660	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	32682681	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.15
1	32682683	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	32682686	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	32683020	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.342857
1	32683022	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.641026
1	32683090	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.56
1	32683095	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	32683105	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	32683119	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	32683135	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	32683139	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	32683159	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	32683162	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	32683188	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.516129
1	32683194	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	32683655	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.36
1	32683692	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.135135
1	32683732	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.205882
1	32683733	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.147059
1	32683737	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	32683762	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	32683774	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	32683775	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	32683798	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.121212
1	32683813	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	32683833	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	32683842	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.289474
1	32683885	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	32683901	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.645161
1	32683907	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	32744662	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.0568182
12	32744663	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.0357143
11	32853772	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	33005238	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.2
6	33005380	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	1
6	33005409	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	33263935	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
21	33263948	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.857143
21	33263954	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
21	33263955	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.263158
21	33263959	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.225
21	33263988	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.290323
21	33263998	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	33264042	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.233333
21	33264056	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.592593
21	33264079	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.861111
21	33264080	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.228571
21	33264779	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.172414
21	33264783	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.448276
21	33264835	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.178571
21	33264840	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.111111
21	33264841	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.28
21	33264844	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.631579
21	33264854	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.47619
21	33264911	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	33264916	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.571429
21	33264920	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.642857
21	33264941	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	33300472	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0515464
6	33300776	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.047619
6	33300844	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0307692
6	33301511	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
21	33355830	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
20	33705050	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.666667
20	33705059	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.1
20	33705118	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.125
15	34231206	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.1
15	34231213	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	34231214	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	34231237	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.285714
15	34231240	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0689655
15	34231250	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.121212
15	34231279	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	34231280	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.113636
15	34231315	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.170732
15	34231318	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	34231355	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.25
15	34231661	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	34231722	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.113636
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.595238
15	34231746	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.05
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.45
15	34231765	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.1
15	34231819	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.285714
15	34232288	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	34232344	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0689655
15	34232455	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.2
15	34232474	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.190476
15	34232507	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	34470191	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	34470204	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.1
19	34470209	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	34470616	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.380952
19	34470640	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	34470662	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.75
19	34470664	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.125
5	34906057	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.357143
5	34906092	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.32
5	34906093	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.08
5	34906137	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	34906229	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.25
5	34906230	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.25
5	34906421	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.125
5	34906553	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.538462
5	34908348	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
5	34908378	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	34908402	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.1
5	34908407	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.1
17	35010640	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0222222
1	35602113	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	35602114	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0333333
1	35602126	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.122449
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0784314
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.220779
1	35602165	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	35602187	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0677966
1	35602210	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0597015
1	35602216	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.652778
1	35602232	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.258065
1	35602285	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.625
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	35602565	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0851064
1	35602583	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.170732
1	35602595	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.257143
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.238095
1	35602636	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.163265
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.101449
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.126984
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	35602701	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.03
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.252174
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.155738
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.31405
22	35659829	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.131579
22	35659830	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.243243
22	35659905	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
22	35659927	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.12069
22	35659950	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.116883
22	35659964	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.155844
22	35659976	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.121212
22	35661142	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	35661159	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.301587
22	35661178	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.08
22	35661192	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0344828
22	35661201	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.109091
22	35661204	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0980392
22	35661214	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.115385
22	35661220	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0512821
22	35661237	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.909091
22	35661238	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.321429
22	35661278	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
22	35661291	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.36
22	35661292	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.08
22	35661307	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.416667
22	35661308	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
1	35856712	A->G	+	ENSG00000134698	AGO4	protein_coding	three_prime_utr	.	.	Alu	0.0422535
19	35887794	A->G	-	ENSG00000167604	NFKBID	protein_coding	three_prime_utr	.	.	Alu	0.125
1	36069302	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	36215301	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.5
9	36216783	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.2
9	36216800	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0540541
9	36216840	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0625
9	36216898	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.310345
9	36216901	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.190476
21	36293883	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.1
22	36488492	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	36488497	A->G	-	ENSG00000100350	FOXRED2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	36745615	A->G	-	ENSG00000267041	ZNF850	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	36745616	A->G	-	ENSG00000267041	ZNF850	protein_coding	three_prime_utr	.	.	Alu	0.3
19	36746488	A->G	-	ENSG00000267041	ZNF850	protein_coding	three_prime_utr	.	.	Alu	0.2
19	36746489	A->G	-	ENSG00000267041	ZNF850	protein_coding	three_prime_utr	.	.	Alu	0.4
20	36781911	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	36890602	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	36996567	A->G	-	ENSG00000080839	RBL1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
20	36996581	A->G	-	ENSG00000080839	RBL1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37102068	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0350877
2	37102070	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	37102071	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.491228
2	37102074	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37102092	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	37102095	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.581818
2	37102118	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0853659
2	37102140	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37102157	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0430108
2	37102158	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	37102164	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.322917
2	37102171	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0315789
2	37102188	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.138889
2	37102204	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.308824
2	37102209	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	37102218	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.03125
2	37102226	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0350877
2	37103258	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	37103288	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	37103292	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	37103293	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	37103333	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	37103360	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.48
2	37103364	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	37103423	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.184211
2	37103468	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	37103469	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	37103471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	37103477	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.05
2	37103876	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0471698
2	37103882	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.127451
2	37103885	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0306122
2	37103894	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0326087
2	37103895	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.172043
2	37103922	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.127907
2	37103934	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0674157
2	37103946	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.102273
2	37103973	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0961538
2	37103976	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.24
2	37104018	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	37104028	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.419355
2	37104057	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37104064	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	37104078	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	37104367	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37104382	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	37104412	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.25
2	37104471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	37104484	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	37104496	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0816327
2	37104499	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.06
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37104519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0638298
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0816327
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.44
2	37202389	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	37202435	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.046875
2	37202525	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.12069
2	37202534	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.274194
2	37202546	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.3
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37202595	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	37204331	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.097561
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0681818
2	37204377	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0652174
2	37204378	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	37204395	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	37204439	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	37204443	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	37204458	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.116667
2	37204461	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.245283
2	37204536	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0212766
2	37204537	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0537634
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.148936
2	37204550	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0294118
5	37288959	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	37290221	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0945946
5	37290233	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0617284
5	37290234	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0365854
5	37290295	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.04
5	37290298	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.266667
5	37290311	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.121951
5	37290314	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.35
5	37290333	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.128205
5	37290365	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.829268
5	37290368	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	37290390	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.585366
5	37290391	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.625
5	37290394	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0731707
5	37290402	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.05
5	37290464	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.857143
5	37291284	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	37291308	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0612245
5	37291309	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	37291310	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0416667
5	37291344	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.516129
5	37291370	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.233333
5	37291374	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.172414
5	37291379	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	37291380	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	37291406	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.08
5	37291438	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.173913
5	37291446	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.416667
5	37291448	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.375
5	37291457	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.37931
5	37291471	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.482759
5	37291472	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0666667
5	37291516	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	37477526	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.103448
17	37477527	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.137931
17	37477534	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	37477539	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	37477542	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
17	37477564	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
17	37477565	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
17	37477604	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	37477620	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.08
17	37477644	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	37477647	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.916667
17	37477716	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	37477729	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	37477732	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.657143
17	37477738	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	37477860	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	37477866	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.2
17	37477867	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.233333
17	37477872	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.137931
17	37477888	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	37477910	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.6
17	37477971	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	37478011	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.692308
17	37478038	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	37478070	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	37478102	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	37503316	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	37503328	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0566038
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.160714
9	37503353	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0350877
9	37503367	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0344828
9	37503370	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0526316
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.178571
9	37503458	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0545455
9	37503498	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	37517049	A->G	-	ENSG00000275066	SYNRG	protein_coding	three_prime_utr	.	.	Alu	0.2
17	37517132	A->G	-	ENSG00000275066	SYNRG	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	37612349	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.4
1	37860922	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	37860971	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	37860993	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	37861008	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	37861011	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	37861028	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.216216
1	37861056	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.320755
1	37861066	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	37861102	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0425532
1	37861124	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	37861463	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0724638
1	37861469	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0405405
1	37861481	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0294118
1	37861509	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.102941
1	37861785	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	37861791	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	37861815	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	37861870	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37861873	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	37861906	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.392857
1	37861912	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	37862028	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	37888812	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.111111
22	37888836	A->G	+	ENSG00000279738	AL022311.1	sense_overlapping	three_prime_utr	.	.	Alu	0.230769
3	38525833	A->G	+	ENSG00000157036	EXOG	protein_coding	three_prime_utr	.	.	Alu	0.190476
7	38723466	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.259259
7	38723468	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.178571
7	38723474	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.892857
7	38723531	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	38723551	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.8
7	38723600	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.347826
7	38723602	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.714286
7	38723612	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.5625
7	38723641	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	38723648	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	38724620	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0533333
7	38724686	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	38724718	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.171429
7	38724722	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	38724742	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.151515
7	38724758	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.176471
7	38724785	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	38724793	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	38724795	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.146341
7	38724799	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0434783
7	38724805	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0454545
7	38724859	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	38849582	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.097561
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.317073
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	38849890	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0444444
17	38849961	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	38849970	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	38849996	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	38868084	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.225
19	38868163	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	38868164	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0540541
19	38868388	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.101695
19	38868411	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.156863
19	38868415	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.490909
19	38868430	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	38868512	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	38868589	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	38869028	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	38869067	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.291667
8	38970679	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0350877
8	38970718	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.140351
8	38970719	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.174603
8	38970743	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
8	38970748	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.365854
8	38971701	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0222222
8	38971706	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0210526
8	38971782	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.020202
8	38971800	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0705882
8	38971810	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	38971816	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.116279
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.26
8	38971897	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	38972218	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.129032
8	38972235	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.128205
8	38972256	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.197531
8	38972316	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
8	38972320	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.474227
8	38972326	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.148515
8	38972328	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.170213
8	38972406	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0272727
8	38972446	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0595238
8	38972447	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.22619
8	38972958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.047619
8	38972961	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
8	38972977	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0246914
8	38973005	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0380952
8	38973012	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0263158
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	38973037	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.026087
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.12069
8	38973067	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	39018748	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0206186
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.030303
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.141304
22	39018895	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0215054
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.254545
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.243902
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.584906
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.103774
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.363636
22	39019976	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0246914
22	39019979	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0277778
22	39020018	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0210526
22	39020030	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.122449
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0258621
22	39020058	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0243902
22	39020070	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0238095
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.218487
22	39032849	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.227273
22	39033063	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.137931
22	39033096	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	39033161	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.157895
22	39053349	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	39053494	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	39256056	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	39256155	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.275862
17	39256199	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	39256205	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	39257045	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.257143
17	39257121	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.235294
17	39257122	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	39257148	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.235294
17	39257187	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.15
17	39259749	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.08
19	39490448	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.125
19	39490451	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.375
19	39490473	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	39490484	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	39490501	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	39490528	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.125
19	39490530	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	39490618	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	39490625	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	39490628	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.25
19	39491952	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	39491979	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	39491980	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	39549156	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	39549167	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.08
4	39549347	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.571429
4	39549358	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.75
4	39549388	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.85
4	39549398	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.318182
4	39549487	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.2
4	39549520	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	39549559	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.583333
4	39550555	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	40462615	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	40462637	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.0810811
3	40462638	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.162162
3	40462644	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.702703
3	40464039	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.47619
3	40464044	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.421053
3	40464063	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.190476
3	40464070	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	40464106	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	40464107	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	40464169	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	40464171	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	40464194	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.125
3	40466070	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	40466071	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.25
3	40466111	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	40466112	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	40466116	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.380952
3	40466136	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.444444
3	40466407	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	40466417	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	40466425	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	40466426	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.107143
3	40466431	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	40466434	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.129032
3	40466469	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.148148
15	40662781	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.268293
15	40662784	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	40662795	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.255814
15	40662798	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.113636
15	40662799	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
15	40662800	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	40662801	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.155556
15	40662809	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.106383
15	40662813	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	40662849	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
15	40662862	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.075
15	40662869	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.047619
15	40662892	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.552632
15	40662935	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.4375
15	40663177	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.357143
15	40663189	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	40663201	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.380952
15	40663318	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	40663319	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	40663331	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.185185
5	40762017	A->G	-	ENSG00000132356	PRKAA1	protein_coding	three_prime_utr	.	.	Alu	0.0727273
5	40762189	A->G	-	ENSG00000132356	PRKAA1	protein_coding	three_prime_utr	.	.	Alu	0.037037
5	40825843	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.113636
5	40825844	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	40825888	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0392157
5	40825910	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0434783
5	40827005	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0508475
5	40827060	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	40829801	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0769231
5	40829853	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	40829907	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	40829948	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	40829950	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.411765
5	40830350	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	40830362	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	40830363	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0769231
5	40830385	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0571429
5	40830389	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.225
5	40830390	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	40830415	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.195122
5	40830593	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	40830625	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.125
5	40830635	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	40830675	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.315789
5	40830676	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	40830729	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	40830767	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.3
5	40830768	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.4
5	40831079	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.315789
5	40831163	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.305556
5	40831173	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.210526
5	40831185	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0789474
5	40831243	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0689655
5	40831251	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	41542496	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	41542510	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.190476
8	41542514	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.1
8	41542540	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.222222
8	41542567	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.1
8	41542568	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.2
8	41543785	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	41543917	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.3
8	41543946	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.125
8	41543950	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.4375
8	41543954	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	41543969	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.466667
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.183333
19	41871481	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.024
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.168067
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.371681
19	41871517	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0263158
19	41871518	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0446429
19	41871534	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	41871544	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.17284
19	41871556	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.414286
19	41871558	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.046875
19	41871559	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.421875
19	41872620	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0277778
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.140351
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.259259
19	41872636	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0363636
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.216667
19	41872649	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0677966
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.326531
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.568627
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0535714
19	41872807	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0291262
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.0754717
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.116071
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.104762
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.06
6	42078150	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	42079616	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42079637	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.258065
6	42079688	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.266667
6	42079814	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	42079815	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42080610	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0882353
6	42080651	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0444444
6	42207296	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	42207319	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0789474
6	42207346	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42207350	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0882353
6	42207359	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	42207386	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0882353
6	42207404	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0882353
15	42532171	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.025974
15	42532172	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.028169
15	42532271	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0253165
15	42532297	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0555556
15	42543009	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	42543337	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0526316
15	42543475	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	42567144	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
15	42567145	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0851064
15	42567184	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.16129
15	42567272	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.08
15	42567307	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.170732
15	42567308	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.162791
15	42567316	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
15	42567320	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	42567724	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	42567788	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	42567882	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.114286
15	42569406	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0793651
15	42569407	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.269841
15	42569419	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	42569424	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0888889
15	42569432	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0784314
15	42569472	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	42569507	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	42569541	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0701754
15	42569542	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0701754
15	42569569	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
6	42886842	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
6	42886873	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.105769
6	42886895	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0438596
6	42886926	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0508475
6	42886943	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0582524
6	42887319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0538462
6	42887368	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0614035
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.196809
6	42888219	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0208333
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.430693
6	42888229	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0616114
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.114833
6	42888269	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0258621
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.412844
6	42888301	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0225989
6	42888304	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.021978
6	42888309	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.216561
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.222222
6	42888317	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.137931
6	42888318	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0228571
6	42888355	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0238095
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.177419
6	42888367	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0491803
6	42888372	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.902655
6	42888378	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.685039
6	42888380	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0546875
6	42888418	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0708661
6	42888419	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0234375
6	42888420	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0390625
6	42888432	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0223881
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.341667
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.154412
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.78169
6	42889185	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0340136
6	42889186	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0201342
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0993377
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0463576
6	42889221	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0248447
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0670732
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.25
6	42889283	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0264901
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0878378
6	42889290	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0583942
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.455285
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0485437
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.045045
6	42889361	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0458015
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.161765
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0530973
21	42909268	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.25
21	42909325	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	42909389	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.137931
21	42909813	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
21	42909823	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.34375
21	42911164	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	43020436	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	43020459	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	43020505	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43020528	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	43020529	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	43020539	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43020553	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	43020593	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	43020594	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.692308
8	43020639	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	43020646	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.368421
8	43020671	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.238095
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.321429
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.344828
8	43020845	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.344828
8	43020846	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.258065
8	43020872	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
8	43020905	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
8	43020914	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0652174
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.234043
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.047619
8	43020939	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	43020940	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
8	43020945	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.09375
8	43020955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.264706
8	43020959	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.193548
8	43020981	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.258065
8	43021004	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.108108
8	43021014	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43021022	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	43021023	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.225806
8	43021343	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.047619
8	43021365	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
8	43021368	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	43021378	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
8	43021383	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43021403	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	43021404	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.171429
8	43021407	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
8	43021421	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	43021433	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43021443	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.411765
8	43021445	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	43021483	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43021486	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.571429
8	43021544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021563	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	43021575	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.322581
8	43021577	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
8	43021851	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	43021854	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.5
8	43026923	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	43029211	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43029214	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43029224	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
8	43029279	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43029333	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	43029422	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	43218068	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0425532
17	43218145	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.04
17	43218405	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	43218406	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	43218414	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.25
17	43218429	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	43218441	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.269231
17	43218485	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.32
17	43218499	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.208333
17	43218500	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.125
17	43218514	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	43218540	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	43218541	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	43218576	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.125
17	43218648	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	43219472	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.1
17	43219478	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.125
17	43219496	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
17	43219596	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.2
5	43380716	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	43380719	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.25
5	43381559	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	43381597	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.388889
5	43381606	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.368421
5	43381639	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.266667
6	43615012	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	43615058	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	43615089	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.125
6	43615185	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	43615219	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	43615435	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	43615448	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.4
6	43615496	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.259259
6	43615507	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	43725582	A->G	-	ENSG00000129317	PUS7L	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	43787848	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	43787870	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.5
12	43787871	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.625
12	43788748	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.958333
12	43788772	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.097561
22	44170070	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.5
22	44170094	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.217391
22	44170113	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.363636
22	44170126	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.25
22	44170127	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	44170221	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.380952
22	44170248	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	44170253	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	44171842	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	44449399	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	44449405	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	44449422	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	44449445	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	44450098	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	44450138	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0333333
7	44578718	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0235294
7	44578742	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.020202
7	44578744	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0322581
7	44578754	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	44578782	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.028169
7	44578828	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	44580909	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.1
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.140351
3	44749145	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0384615
3	44749199	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0638298
3	44749265	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	44749280	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0819672
3	44749281	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.193548
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.491228
3	44749367	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.327273
3	44749387	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.219512
3	44749411	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749412	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.294118
3	44749828	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	44749829	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	44749851	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	44749859	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.555556
3	44749905	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	44749906	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.8
3	44749944	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	44749950	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.125
3	44749967	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	44750044	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.075
3	44750055	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.175
3	44750061	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	44750062	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.114286
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.824818
7	44801912	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0258065
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.139241
7	44801990	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0327869
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.128571
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.309735
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0566038
7	44802334	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0366972
13	45030449	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.08
13	45030480	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.115385
13	45030497	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	45030505	A->G	+	ENSG00000133114	GPALPP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	45077457	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	45077460	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0441176
20	45078229	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.238095
20	45078299	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.413043
20	45078305	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.138298
20	45078306	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.65
20	45078309	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.22
20	45078310	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0606061
20	45078323	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0375
20	45078347	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.15
20	45079068	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.419355
20	45079095	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0454545
20	45079118	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.12766
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.345455
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.77193
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	45079149	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.09375
20	45079165	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
20	45079173	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0859375
20	45079198	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.124138
20	45079200	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0422535
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.384615
20	45079204	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0518519
13	45334144	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.259259
22	45340863	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	45340902	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.103448
22	45340903	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.206897
22	45340920	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.16
22	45340968	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
22	45340986	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	45341037	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.112903
22	45341046	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.0363636
22	45341071	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.0612245
1	45509673	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.2
1	45509896	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	45509902	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.391304
1	45509956	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.35
1	45510441	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	45549573	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	45549673	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.36
19	45549676	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	45549717	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	45549974	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.75
19	45550009	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.714286
19	45550058	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	45550071	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	45550082	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.315789
19	45550101	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.12
19	45550111	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	45552346	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	45680368	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	45680377	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	45680382	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.809524
3	45680399	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	45680425	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.347826
3	45680430	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.818182
3	45680442	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.205882
3	45680482	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.05
3	45680497	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.394737
3	45680498	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.425
3	45680500	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.461538
3	45680550	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.204082
3	45680551	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.265306
3	45680555	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.52381
3	45680563	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	45680608	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.794872
3	45680761	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	45680770	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.12
3	45680791	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	45680795	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	45680801	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	45680808	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	45680835	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.173913
3	45680849	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.125
3	45680850	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.125
3	45680858	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.08
3	45680863	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.08
3	45680889	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.294118
3	45680895	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	45680916	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.7
3	45680930	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.5
3	45680931	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	45680938	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.25
3	45680942	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.615385
19	45703591	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	45703603	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.2
19	45703697	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.785714
19	45703698	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	45703704	A->G	+	ENSG00000011478	QPCTL	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	46364478	A->G	+	ENSG00000117481	NSUN4	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	46603770	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.148148
X	46604518	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.842105
X	46604524	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.421053
X	46604525	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	46604530	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	46604541	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.129032
X	46604561	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.258065
X	46604571	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.27027
X	46604581	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	46604589	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	46604606	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.190476
X	46604614	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	46604628	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	46604659	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	46604698	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	46604704	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	46604705	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.125
X	46605023	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	46605069	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	46605079	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	46605128	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	46605899	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	46605911	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.151515
X	46605988	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.288889
X	46606072	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.102564
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
8	47977073	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0581395
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.130631
8	47977554	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0295567
16	48352384	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	48352390	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	48352391	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.162791
16	48352443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	48352444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.04
16	48352513	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.172414
16	48352514	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	48353264	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.447368
16	48353290	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.282051
16	48353291	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	48353296	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	48353305	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	48353327	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	48353335	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	48353350	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	48353359	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	48353367	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	48353385	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	48353439	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	48354334	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.25
16	48354337	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48354347	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	48354443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	48354444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	48354469	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.173077
16	48354470	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	48354471	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.254902
16	48354472	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.215686
16	48354483	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.173077
19	48453396	A->G	+	ENSG00000105447	GRWD1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
X	48577960	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.0266667
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.345455
3	48749578	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.147541
3	48749613	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0461538
3	48749618	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.101695
3	48749619	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0338983
3	48749675	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	48749685	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.196721
3	48750129	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	48750147	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
3	48750161	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	48750198	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	48750200	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0819672
3	48750201	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	48750207	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	48750239	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0461538
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.457627
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.09375
3	48750281	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0684932
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.106667
3	48750287	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0285714
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	48750423	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.571429
3	48750476	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.2
17	48864157	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	48864189	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	48864247	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.138889
17	48864253	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
17	48864286	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	48864316	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.15873
17	48864325	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	48864326	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0535714
3	49415288	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.04
3	49415345	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	49415351	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	49415354	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.16129
3	49415409	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	49415419	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.121212
17	49831106	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.25
13	49913177	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.266667
13	49913178	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.266667
13	49913203	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.230769
13	49913731	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.3
10	49973420	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.25
10	49973421	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.25
10	49973474	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	50105383	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	50105417	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.421053
16	50105572	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.318182
16	50105604	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.515625
16	50105606	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.0441176
16	50105615	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.12
16	50105631	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	50105645	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	50105651	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.140845
16	50105652	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	50105662	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.027027
16	50105669	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.190476
16	50105681	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	50246001	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.0740741
14	50246023	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	50246060	A->G	-	ENSG00000087299	L2HGDH	protein_coding	three_prime_utr	.	.	Alu	0.304348
14	50325998	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.388889
14	50326005	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.4
14	50326028	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0645161
14	50326069	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50326070	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.137931
14	50326080	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0689655
14	50326083	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.137931
14	50326109	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	50326110	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0555556
14	50326119	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.16129
14	50326136	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50326859	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0869565
14	50326961	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	50327126	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50327149	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.190476
14	50327184	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	50327185	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50327198	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	50327250	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.4
14	50327255	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	50327317	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.08
14	50327322	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	50327323	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.12
14	50327535	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.441176
14	50327566	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.148936
14	50327569	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0851064
14	50327590	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50327604	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.702703
14	50327606	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	50327620	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0645161
14	50327645	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.59375
14	50327648	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	50327662	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50327665	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.162162
14	50327674	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	50327693	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.121212
14	50327699	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0857143
14	50327706	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.227273
14	50327724	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.0769231
18	50392804	A->G	+	ENSG00000154839	SKA1	protein_coding	three_prime_utr	.	.	Alu	0.26087
18	50393235	A->G	+	ENSG00000154839	SKA1	protein_coding	three_prime_utr	.	.	Alu	0.578947
16	50673129	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	50673193	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.104167
12	50930336	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.341772
12	50930339	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.204969
12	50930380	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.118943
12	50930397	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0506329
12	50930409	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.125
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.225131
12	50930458	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0289855
12	50930475	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0358974
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.106061
12	50930540	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0774648
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.141753
12	50930664	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0467836
12	50930684	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.184375
12	50930713	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.155063
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.171521
12	50930762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0520833
12	50930843	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0200573
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.152299
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.219178
12	50931446	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0285714
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.178082
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.18
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	50931505	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.025
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0923077
12	50931541	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0352941
12	50931564	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.207207
12	50931568	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.11976
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0843373
12	50931596	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0847458
12	50931600	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.039548
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0333333
12	50931636	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0607735
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0855263
12	50931694	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0375
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.280702
13	50971618	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.266667
13	50971635	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.230769
13	50971645	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.2
13	50972291	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.7
13	50972361	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.375
13	50972363	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.5
13	51444625	A->G	-	ENSG00000102786	INTS6	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	51444692	A->G	-	ENSG00000102786	INTS6	protein_coding	three_prime_utr	.	.	Alu	0.3
15	51910338	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0333333
15	51913206	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.227273
15	51913749	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0465116
15	51913757	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0784314
15	51913758	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0392157
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.118644
15	51913812	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.112903
15	51913818	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0566038
15	51913836	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0681818
15	51913854	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0645161
15	51913860	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
15	51913861	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
15	51913862	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0625
15	51913866	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	51913892	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.363636
15	51913933	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	51913938	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.714286
15	51913957	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.5
15	51914003	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	51914409	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.441176
15	51914410	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.638889
15	51914460	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.170732
15	51914493	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	51914502	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.216216
15	51914545	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.230769
15	51914566	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	51914801	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.5
15	51914849	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51914861	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.125
15	51914898	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	51914912	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.136364
15	51915004	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	52031763	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.25
1	52373126	A->G	-	ENSG00000085840	ORC1	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	52556240	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	52556586	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	52691084	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
13	52691218	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	52703367	A->G	-	ENSG00000213020	ZNF611	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52703379	A->G	-	ENSG00000213020	ZNF611	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	52703380	A->G	-	ENSG00000213020	ZNF611	protein_coding	three_prime_utr	.	.	Alu	0.8
19	52703455	A->G	-	ENSG00000213020	ZNF611	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	52775636	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.121212
14	52775699	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	52775707	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
14	52775760	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.375
14	52775770	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	52775782	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0816327
14	52775800	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.102041
14	52775826	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
14	52775850	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
14	52776141	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
14	52776652	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0625
14	52776676	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.636364
14	52776688	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
14	52776693	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.318182
14	52776694	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.173913
14	52776720	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.08
14	52776770	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	52797871	A->G	-	ENSG00000198538	ZNF28	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	52823198	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.375
1	52823252	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.48
1	52823875	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.269231
1	52824014	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.463415
1	52824016	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	52824086	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	52824087	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.533333
1	52824201	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	52824207	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	52824220	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.351351
1	52824268	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	52824594	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	52824626	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52825748	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.5
1	52825753	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.30303
1	52825762	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	52825763	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.258065
19	52880443	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	53411552	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	53411554	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	53411566	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.15
19	53495405	A->G	+	ENSG00000198346	ZNF813	protein_coding	three_prime_utr	.	.	Alu	0.2
19	53495433	A->G	+	ENSG00000198346	ZNF813	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	54233696	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0340909
12	54237935	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0263158
12	54240499	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	54240500	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.173333
12	54240516	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0454545
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.529412
X	54560993	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	54561004	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.136364
15	55317377	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.05
15	55317452	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.210526
14	55367658	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	55368331	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.2
4	55370670	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.5
4	55370680	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.125
4	55371732	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.5
4	55371781	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.35
4	55371784	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.15
4	55371875	A->G	+	ENSG00000128039	SRD5A3	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	55389165	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.5
19	55389285	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.15
19	55390305	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	55390346	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.3
19	55390414	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	55821670	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	55821671	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	55824991	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	55825016	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	55825105	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.102564
7	55956192	A->G	+	ENSG00000239789	MRPS17	protein_coding	three_prime_utr	.	.	Alu	0.0888889
7	55956333	A->G	+	ENSG00000239789	MRPS17	protein_coding	three_prime_utr	.	.	Alu	0.05
7	56011371	A->G	-	ENSG00000146733	PSPH	protein_coding	three_prime_utr	.	.	Alu	0.172414
7	56011380	A->G	-	ENSG00000146733	PSPH	protein_coding	three_prime_utr	.	.	Alu	0.12
7	56011381	A->G	-	ENSG00000146733	PSPH	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	56067429	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.25
8	56067441	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	56067496	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.2
8	56067521	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	56067537	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.2
8	56067538	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.3
8	56067574	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.357143
8	56068341	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.533333
8	56068346	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	56068360	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.125
8	56068376	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.190476
8	56068394	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	56068426	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.555556
8	56068438	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.36
8	56068455	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	56068456	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.25
12	56229627	A->G	+	ENSG00000139579	NABP2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
4	56459955	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.024
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.17037
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.176871
4	56459990	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0388889
4	56459993	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0222222
4	56460084	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0271739
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.534615
4	56460126	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0306513
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.156098
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.124378
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.04
4	56460163	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0358744
4	56460167	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0607477
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.215278
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.268966
4	56460794	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0434783
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.138122
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.133641
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.102362
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.177606
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.783333
4	56460926	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0337553
4	56460931	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0411523
4	56461588	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.2
3	57272806	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.242424
3	57272860	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
3	57626587	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
3	57627308	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	57627326	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	57836092	A->G	-	ENSG00000181610	MRPS23	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57845743	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	57845790	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	57863827	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	57863828	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	57863841	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	57864869	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	58127386	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58263261	A->G	+	ENSG00000198131	ZNF544	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	58263340	A->G	+	ENSG00000198131	ZNF544	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	58318551	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	58318813	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	58318823	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	58321001	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.636364
3	58321002	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.818182
17	59201707	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	59201709	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.264706
17	59201806	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	59201809	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	59201810	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	59201824	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.130435
17	59201860	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	59201867	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	59201872	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.541667
17	59201873	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.130435
17	59201903	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.538462
17	59201912	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.08
17	59201921	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.44
17	59201923	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.173913
17	59203468	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.107143
17	59203477	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.448276
17	59203485	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	59203486	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.185185
17	59203487	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	59203604	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	59203649	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	59203659	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	59203660	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.107143
17	59203694	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.178571
17	59203697	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.407407
17	59203698	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.407407
17	59203708	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.190476
17	59203711	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.380952
17	59203715	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.269231
17	59203752	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.129032
17	59203764	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	59204152	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0810811
17	59204275	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0491803
17	59204583	A->G	+	ENSG00000068489	PRR11	protein_coding	three_prime_utr	.	.	Alu	0.0555556
15	60422224	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.545455
15	60422271	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.285714
15	60422297	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	60422301	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.782609
15	60422302	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.36
15	60422717	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.347826
15	60422727	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.785714
11	61800225	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	61800228	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.08
11	61800254	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
11	61800266	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0634921
11	61801943	A->G	-	ENSG00000149485	FADS1	protein_coding	three_prime_utr	.	.	Alu	0.0289855
17	62449501	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.1
17	62449591	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.3
17	62450615	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	62450643	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.5
15	63153642	A->G	-	ENSG00000185088	RPS27L	protein_coding	three_prime_utr	.	.	Alu	0.0689655
15	64140640	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	64140645	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.130435
15	64142130	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.121212
15	64142174	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.107143
15	64142303	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	64142315	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	64191812	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	64191815	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.461538
17	64322839	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	64322854	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
17	64322880	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.114286
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.205128
17	64322887	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	64322889	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.075
17	64322944	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	64322997	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	64364763	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.075
15	64364824	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	64364825	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0555556
15	64364912	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.075
15	64364948	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	64365091	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.1
15	64365274	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	64365331	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0555556
15	64365340	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0612245
15	64365359	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0508475
12	64448944	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0677966
12	64448989	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.345679
12	64449012	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	64449013	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.26087
12	64449022	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.131579
12	64449052	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0735294
12	64449074	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	64449075	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.618182
12	64449084	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.2
12	64449088	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.16
12	64449140	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.1
12	64449145	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	64450269	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0204082
12	64450281	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.605263
12	64450291	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.916667
12	64450293	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.119048
12	64450338	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0674157
12	64450346	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0238095
12	64450354	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.631068
12	64450358	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0280374
12	64450369	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.542373
12	64450370	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0263158
12	64450387	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.042735
12	64450419	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0927835
17	64467724	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	64468339	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.097561
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.97561
17	64468389	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	64468418	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	64468428	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.115385
17	64468450	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	64468454	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	64468463	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.08
17	64468498	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	64468523	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0638298
15	65149228	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.1
15	65149326	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	65149327	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.15
15	65149375	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.116279
15	65149386	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0444444
15	65149392	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0454545
15	65149439	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	65149627	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	65149663	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	65149694	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	65149748	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	65149760	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.297297
15	65149773	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	65149774	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.157895
15	65149777	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.289474
15	65149778	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0540541
15	65149784	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.1875
15	65150138	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.192308
15	65150145	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0638298
15	65150188	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0625
15	65150197	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.177778
15	65150240	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.115385
15	65150243	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.375
15	65150249	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	65659409	A->G	-	ENSG00000074621	SLC24A1	protein_coding	three_prime_utr	.	.	Alu	0.1
11	65775921	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0331754
11	65775967	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0559006
11	65775987	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.153061
11	65775997	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0230769
11	65776002	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0820896
11	65776029	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0661157
11	65776163	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.121693
11	65776164	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.037234
11	65776871	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0822785
11	65776894	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0786164
11	65776910	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.121519
11	65776911	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.137662
11	65776912	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.03125
11	65776955	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0945455
11	65776999	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0428016
11	65777014	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.023166
11	65777019	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.057971
11	65777032	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.117871
11	65777052	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.17316
11	65777096	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.301158
12	66123329	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0307692
7	66153182	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0454545
7	66153254	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	66153259	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	66153319	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	66153799	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.15
7	66153858	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	66153982	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	66153993	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.232558
7	66154250	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.155556
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.106383
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.382353
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.125
7	66154357	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0789474
7	66154360	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	66154366	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	66154379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0888889
7	66154391	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.047619
15	66333542	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.131579
15	66333543	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.0526316
11	66520807	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	66524247	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	66889532	A->G	+	ENSG00000172840	PDP2	protein_coding	three_prime_utr	.	.	Alu	0.3
17	67338609	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	67338610	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	67338637	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.411765
17	67338651	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.5
17	67338686	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.761905
17	67338712	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.37037
17	67338740	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.263158
17	67338743	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.1
17	67338770	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.102041
17	67338814	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.242424
17	67338870	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.15
17	67339176	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	67339204	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.323529
17	67339236	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.62963
17	67339278	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	67339338	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.125
17	67339343	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	67339344	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.347826
17	67339361	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.518519
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.193878
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.27
1	67409048	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.415385
1	67409142	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	67409166	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.0927835
1	67409176	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	67469377	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.785714
4	67469548	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.266667
11	68755439	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.1
11	68755457	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.238095
11	68755482	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	68755538	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	68755581	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	68755604	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
11	68755612	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.228571
11	68755614	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.151515
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.197917
11	68755870	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0421053
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.040404
11	68755888	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0884956
11	68755929	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.122449
11	68755931	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0847458
11	68755951	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0277778
11	68755957	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.030303
11	68755965	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.126984
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.306452
11	68755990	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0350877
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.368421
11	68756003	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.269231
12	68766291	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	68766407	A->G	+	ENSG00000175782	SLC35E3	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	69210076	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0285714
5	69210082	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0454545
5	69210139	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	69210140	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.075
5	69210179	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.0810811
5	69210267	A->G	+	ENSG00000153044	CENPH	protein_coding	three_prime_utr	.	.	Alu	0.193548
5	69280913	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	69280917	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.290323
5	69281278	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.3
5	69281964	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.772727
5	69281988	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	69281996	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.0882353
5	69282019	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.151515
5	69282028	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	69282095	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.458333
5	69282096	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.125
5	69282123	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.392857
5	69282449	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.447368
5	69282450	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.421053
5	69282475	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.0454545
5	69282476	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.227273
5	69282479	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.205882
5	69282480	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.121212
5	69282498	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.102564
16	69322883	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	69322919	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	69322943	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.232558
16	69322985	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.534884
16	69322986	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.674419
16	69323011	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	69323315	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	69323319	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	69323326	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	69323423	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	69325491	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	69325492	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.258065
16	69325546	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.611111
16	69327316	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.4
16	69327332	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.3
16	69327387	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	69327410	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	69328064	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	69356544	A->G	-	ENSG00000132604	TERF2	protein_coding	three_prime_utr	.	.	Alu	0.06
16	70247172	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	70247993	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0377358
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.430108
16	70248678	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0531915
16	70248723	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0461538
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.270833
16	70248751	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.1
16	70248755	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.26087
16	70248832	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	70248843	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	70249181	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.221053
16	70249236	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0681818
16	70249286	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0384615
16	70249315	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.317647
16	70249322	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.046875
16	70249335	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.216216
16	70249336	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.27027
16	70249757	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	70249868	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.122807
16	70249888	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0877193
16	70249912	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.292683
14	70367450	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	70371481	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	70371547	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	70371556	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	70371557	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	70372975	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	70372978	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	70373023	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	70373115	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.15625
16	70379918	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	70574341	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	70574345	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.375
16	70574579	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.125
16	70575993	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	70588936	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.952381
6	70588939	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	70588940	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	70588941	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	70588980	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	70588985	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.15
6	70588986	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.5
6	70588989	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	70589019	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.45
6	70589050	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.24
6	70589226	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.714286
6	70589265	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	70589349	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.125
6	70589350	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.125
6	70589351	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.125
6	70589356	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.125
6	70589371	A->G	+	ENSG00000154079	SDHAF4	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	70816558	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.3
4	70816624	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.25
4	70816662	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	70816664	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.521739
4	70817370	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	70818106	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	70818136	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	70818176	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	71702345	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.291667
12	71702499	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	71702538	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	71702550	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.588235
12	71702551	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.823529
12	71702970	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	71703070	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.8
12	71703083	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	71973025	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	72024918	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	72027311	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	72027366	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	72027405	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.2
10	72234063	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.259259
10	72234373	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.047619
10	72234877	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0508475
10	72234879	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.122807
10	72234895	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0508475
10	72234931	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0322581
10	72234934	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.171875
10	72234941	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.031746
10	72234949	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0847458
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.140351
10	72234998	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0425532
10	72235004	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.222222
10	72235030	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	72235070	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.416667
10	72235076	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.380952
10	72235341	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	72235380	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.3125
11	72286539	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.1875
11	72286562	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	72286687	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.266667
11	72286746	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72287379	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.25
11	72287451	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.388889
11	72287508	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.1875
11	72287509	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.125
11	72287585	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.25
11	72287586	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.25
11	72289708	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.21875
11	72289709	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.125
11	72289731	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0967742
11	72289776	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	72591038	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.133333
15	72591040	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.25
4	73056864	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.125
4	73057026	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.296296
4	73057035	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0645161
4	73057182	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.2
4	73057206	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0606061
4	73057209	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0789474
4	73057210	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0731707
4	73057264	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.55
4	73057278	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0967742
4	73057318	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	73057326	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.08
4	73057380	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	73057697	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.147059
4	73057732	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.326923
4	73057735	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0377358
4	73057755	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0638298
4	73057766	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0392157
4	73057781	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0408163
4	73057785	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.116279
4	73057824	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.12
4	73057837	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.08
4	73057850	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.125
4	73057851	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.25
4	73057875	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.642857
4	73057888	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	73057945	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.25
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0849673
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.194631
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0503597
10	73249089	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0275862
10	73249096	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0201342
10	73249115	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0201342
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	73249122	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0201342
10	73249149	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0304878
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.563218
10	73249821	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.05
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.147541
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0888889
10	73249907	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.121212
10	73249910	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0625
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.075188
10	73249963	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0364964
10	73250018	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.032
10	73250023	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0795455
10	73250043	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0396825
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.203008
10	73250096	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0241935
10	73250157	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0789474
10	73250163	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.125
10	73250329	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	73424190	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	73424334	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.136364
6	73424352	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	73424377	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	73424950	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	73424951	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	73424991	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	73425031	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.1
6	73425036	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.210526
6	73425125	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	73516501	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0353535
6	73516513	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0319635
6	73516560	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0232558
6	73516586	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0583942
6	73593820	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	73594290	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.217391
6	73594291	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.0869565
14	74058071	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.347826
14	74058083	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
14	74058084	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74058138	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.4375
14	74058205	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.05
14	74058244	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.1
14	74058840	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
14	74059451	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	74059656	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0444444
14	74060242	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.106383
14	74060272	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
14	74060273	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.159091
14	74060281	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	74231776	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	74231777	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	74231791	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
7	74231817	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.1
7	74231844	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	74231856	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0363636
7	74231899	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
7	74231946	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0547945
7	74231952	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	74231966	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.125
16	74450762	A->G	-	ENSG00000090863	GLG1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
11	74455866	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.2
11	74456245	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	74456275	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	74621779	A->G	-	ENSG00000168411	RFWD3	protein_coding	three_prime_utr	.	.	Alu	0.0555556
14	74735609	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	74735633	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
14	74735669	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.32
14	74735699	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.72093
14	74735709	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.387097
14	74735829	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
14	74735841	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.144928
14	74735966	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74735995	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
14	74736002	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
14	74736145	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
14	74736153	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.194444
14	74736154	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.162162
14	74736259	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
14	74736291	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.321429
14	74736292	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.37931
14	74736297	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	74736301	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.722222
14	74736337	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	74736362	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74736364	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.384615
14	74736394	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	74738203	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	74738274	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.5
16	75443923	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0930233
16	75445412	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.131148
16	75445424	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.2
16	75445426	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.369231
16	75445433	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.386667
16	75445458	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0746269
16	75445479	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	75445496	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.681818
16	75445523	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.229167
16	75445569	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0677966
16	75445570	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0508475
16	75445572	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.206897
16	75445576	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.527273
16	75445586	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0816327
16	75445919	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	75445933	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	75445993	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.132075
16	75446009	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.480769
16	75446012	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.22449
16	75446066	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	75446075	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.225806
16	75446092	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	75446112	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.387755
16	75446123	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.155556
12	75496033	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	75496034	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.555556
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.888889
12	75496115	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.2
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.588235
12	75496273	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.183673
12	75496308	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	75496311	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.09375
12	75496317	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.121212
12	75496341	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	75599324	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	75663650	A->G	+	ENSG00000115364	MRPL19	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	75889300	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	75889326	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0652174
17	75889327	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0465116
17	75889853	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0857143
17	75889858	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.189189
17	75889923	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	75890131	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.102564
17	75890179	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	75942997	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
17	75943060	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.1
17	75943098	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	75943974	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	75943986	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.171429
17	75943987	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	75943996	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.428571
17	75944013	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.290323
17	75944028	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.148148
17	75944039	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	75944076	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	75944106	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.615385
17	75944112	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.769231
17	75944122	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.4
17	75944150	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.277778
17	75944151	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	75944226	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.846154
17	75944794	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.4
17	75944807	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.428571
17	75944808	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.194444
17	75944836	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.375
17	75944837	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.6
17	75944878	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
17	75944907	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	75944920	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.137931
17	75944922	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	75944928	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	75944949	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.46875
17	75944950	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.137931
17	75944983	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.4
17	75945013	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.148148
17	75945018	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75945019	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.103448
14	76205039	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.32
14	76205069	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0857143
14	76207051	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	77023818	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.7
11	77023819	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.6
11	77023824	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.3
11	77025649	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	77025667	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.137931
11	77025668	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.419355
11	77025680	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.777778
X	77827502	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0708661
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.028777
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	77827534	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.100719
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0583942
X	77827579	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0204082
X	77827609	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0218978
X	77827621	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.104478
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.11811
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.042735
X	77827682	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0353982
X	77827712	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0289855
X	77828055	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0238095
X	77828077	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
X	77828078	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0777778
X	77828088	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0208333
X	77828144	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0387097
X	77828147	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0299401
X	77828148	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0467836
X	77828156	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0670391
X	77828157	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
X	77828173	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0316456
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.119497
X	77828207	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.023622
X	77828226	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	77828331	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.154762
X	77828382	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.134021
X	77828383	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0985915
X	77828394	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.19171
X	77828403	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.028436
X	77828417	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.184783
X	77828418	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.247253
X	77828484	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0272727
X	77828491	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0275229
X	77828504	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0501931
11	78068542	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.125
11	78068619	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.0689655
11	78068647	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.0625
11	78068663	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.323529
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.195122
11	78069057	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	78069059	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.06
11	78069071	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.204082
9	78272288	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	78273704	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.8
9	78273727	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.2
9	78273729	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.727273
9	78275676	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	78275836	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	79949520	A->G	-	ENSG00000122490	PQLC1	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	80627470	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.027027
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0592593
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0472973
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.154321
5	80627513	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0314465
5	80627515	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0294118
5	80627516	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0232558
5	80627541	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.046875
5	80627542	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0530303
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.141667
5	80627583	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0481928
5	80627604	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	80627611	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.485294
5	80627627	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0609756
5	80628007	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.275
5	80628024	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0921053
5	80628087	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.15873
5	80628093	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	80628100	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0689655
15	80975924	A->G	-	ENSG00000117899	MESD	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	83005358	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	83005406	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	83005409	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.315789
15	83005449	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.08
15	83005485	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.125
15	83005573	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	83460793	A->G	-	ENSG00000163319	MRPS18C	protein_coding	three_prime_utr	.	.	Alu	0.363636
15	84641599	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.454545
15	84641642	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.153846
15	84642218	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.208333
15	84642257	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.296296
15	84642258	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.0740741
15	84642277	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.0967742
X	85090829	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.227273
X	85090880	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.352941
X	85091020	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.296296
X	85091165	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	85091937	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.291667
X	85091953	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.242424
X	85091970	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0434783
X	85091976	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	85091977	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0851064
2	85319274	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.030303
2	85319275	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0461538
2	85319306	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0379747
2	85319328	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.06
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.136842
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.221239
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0705882
2	85319396	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0287356
2	85549603	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	85651508	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	85651509	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	85653536	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.0379747
2	86020436	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	86022664	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	86022681	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	86022721	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	86022807	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	86022839	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	86023991	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	86024021	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	86024028	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	86024902	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	86024915	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	86024920	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.322581
2	86025013	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	86025025	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	86025091	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.3125
16	89563498	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	89563618	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	89634503	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.458333
6	89634509	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	89634852	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	89634862	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.0681818
6	89634886	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.147059
6	89634987	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	89832361	A->G	-	ENSG00000157823	AP3S2	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	90083209	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
15	90083229	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	90083230	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	90083261	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
15	90083360	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.0612245
15	90083406	A->G	-	ENSG00000182054	IDH2	protein_coding	three_prime_utr	.	.	Alu	0.05
15	90277655	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	90385910	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	90385953	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.176471
7	90385954	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.235294
7	90386577	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	93366748	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	93366749	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
9	93448441	A->G	-	ENSG00000188938	FAM120AOS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
11	93735605	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	93735630	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	94059370	A->G	-	ENSG00000178700	DHFR2	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	94127965	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	94127966	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	94128043	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	94128044	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	94128117	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	94128173	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	94128174	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	94415844	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	94416014	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	94417171	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.46875
11	94417173	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.0967742
11	94417181	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.933333
11	94417182	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.909091
11	94417205	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	94417249	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.189189
11	94417250	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.25
10	94610335	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.26087
10	94610336	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.416667
10	94610645	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.047619
10	94610773	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.133333
10	94610799	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.125
10	94612670	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.103448
10	94612687	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.310345
10	94612726	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.114286
10	94612727	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.09375
10	94612805	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.16
10	94612806	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.28
10	94612815	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.380952
10	94612873	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.129032
8	94792241	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	94792262	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.411765
8	94792296	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.171429
8	94792365	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	94792377	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.896552
8	94792387	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.2
8	94792393	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.114286
8	94792413	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	94792679	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.444444
8	94792709	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.21875
8	94792735	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.625
8	94792741	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	94792745	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	94792800	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	94792810	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.608696
8	94792842	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.318182
8	94792843	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	96249515	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	97726820	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0615385
8	97726959	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0232558
8	97726980	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.046875
8	97726981	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.03125
8	97727253	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0422535
8	97727366	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0555556
8	97727380	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0900901
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.115044
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.209091
8	97728688	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0897436
8	97728707	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0985915
8	97728712	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	98548843	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.15625
12	98548910	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.734807
12	98548917	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.229947
12	98548918	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0957447
12	98548920	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.229592
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	98549041	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.05
12	98549042	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.08
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.415525
12	98549053	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0372093
12	98549069	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.747423
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.270408
12	98549233	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0752688
12	98549240	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0209424
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.926606
12	98549264	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0234899
12	98549305	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0233766
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.381295
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.140187
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.168591
12	98604601	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	98604831	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	98605329	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	98605335	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.3
12	98605391	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	98605616	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.2
12	98605700	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.25
12	98605857	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.193548
12	98605908	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	98733533	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.05
12	98733559	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0363636
12	98733634	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0508475
12	98733668	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0862069
12	98733669	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	98869534	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.461538
6	98873697	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	98873710	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	99195826	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.104167
2	99195848	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	99195873	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.449275
2	99195951	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.162162
2	99195966	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	99195983	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.03125
2	99195984	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.350515
2	99195987	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.112245
2	99196001	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.119048
2	99196026	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0365854
2	99196345	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.13253
2	99196352	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.402299
2	99196354	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	99196375	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	99196380	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.625
2	99196394	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.265823
2	99196401	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.131579
2	99196425	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.027027
2	99196434	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.776119
2	99196440	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0294118
2	99196488	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0566038
2	99196515	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.205882
2	99196525	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	99196540	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	99196544	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	99196557	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.236842
2	99196568	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	99493453	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.0701754
10	99713749	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.0377358
10	99713906	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.0384615
4	99880965	A->G	-	ENSG00000109270	LAMTOR3	protein_coding	three_prime_utr	.	.	Alu	0.08
4	99880966	A->G	-	ENSG00000109270	LAMTOR3	protein_coding	three_prime_utr	.	.	Alu	0.08
1	100024436	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.291667
1	100024440	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.869565
1	100024486	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.411765
1	100024500	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.315789
10	100232437	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
10	100232502	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	100232524	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.25
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.529412
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.823529
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.357143
10	100232668	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.116279
10	100232677	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	100232926	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0298507
10	100232927	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0322581
10	100233026	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.12069
10	100233036	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.128571
10	100233048	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.078125
10	100233053	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.213115
10	100233065	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.046875
10	100233091	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0727273
10	100233121	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
10	100233141	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.272727
10	100233142	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.25
X	101009593	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	101009637	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.25
X	101009656	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	101009678	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	101009679	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	101010290	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.097561
X	101010296	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.2
X	101010300	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.125
X	101010329	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.22
X	101010330	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0816327
X	101010349	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0638298
X	101010355	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.134615
X	101010360	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.25
X	101010396	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	101010402	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	101010404	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.571429
X	101010408	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	101091531	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	101091569	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	101091571	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.2
7	101091573	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.2
2	101271532	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.08
2	101271546	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	101823564	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.15
3	101823592	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101824560	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	101824664	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	101824679	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.125
3	101824739	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	101826913	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	102448761	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
7	102449560	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0338983
7	102449580	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
7	102449600	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
7	102449758	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.15
7	102449860	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	102450004	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.135135
7	102450075	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.04
7	102450937	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	102450945	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	102451036	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	102451080	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	102753890	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	103102436	A->G	+	ENSG00000161048	NAPEPLD	protein_coding	three_prime_utr	.	.	Alu	0.1
14	103590740	A->G	+	ENSG00000256053	APOPT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	105049680	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	105846789	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	105846893	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	105846921	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.208333
6	106666052	A->G	+	ENSG00000130348	QRSL1	protein_coding	three_prime_utr	.	.	Alu	0.0784314
6	108042691	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.761905
11	108365750	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	108365869	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	108365978	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	108367011	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.130435
11	108367088	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.25
11	108367105	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.25
11	108367226	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.2
11	108367230	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	108367248	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.190476
11	108367249	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.238095
11	108367261	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	108786648	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.136364
6	109463083	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.222222
6	109463098	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	109463124	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.3
6	109463125	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.15
6	109464706	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.2
4	109689108	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.0535714
9	112471627	A->G	+	ENSG00000119471	HSDL2	protein_coding	three_prime_utr	.	.	Alu	0.0338983
9	112684279	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.107143
9	112684306	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
9	112684431	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.3
9	112684441	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	112684444	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
9	112684445	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.347826
9	112684467	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.121951
9	112684505	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.69697
9	112684531	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
9	112684549	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.36
9	112685199	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.322581
9	112685254	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	112685300	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.3
9	112686593	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.178571
9	112686634	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.416667
9	112686635	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.173913
9	112686661	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.194444
9	112686664	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	112686770	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.367347
9	112686771	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.375
9	113292066	A->G	+	ENSG00000136875	PRPF4	protein_coding	three_prime_utr	.	.	Alu	0.151515
5	115829866	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	115829894	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.384615
5	115830034	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	116714628	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.358974
12	116714712	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	116715123	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	116715180	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.075
12	117029665	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	117029666	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.555556
12	117029713	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	117029739	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	117029749	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.3125
12	117029775	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	117029793	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.416667
12	117029847	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.4
12	117029848	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	117029863	A->G	+	ENSG00000174989	FBXW8	protein_coding	three_prime_utr	.	.	Alu	0.25
5	118837803	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.346154
5	118837897	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.227273
5	118838973	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.866667
5	118839470	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.625
5	118839471	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.733333
5	118839515	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.275862
5	118839519	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
11	119001815	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	119394843	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.0967742
X	119453558	A->G	+	ENSG00000077713	SLC25A43	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	119538614	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.12
X	119538639	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	119538678	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.125
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.481481
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.551724
X	119538717	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	119539273	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	119539275	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.346154
X	119539287	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.35
X	119539288	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.038961
X	119539306	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.206522
X	119539314	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0340909
X	119539315	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0246914
X	119539349	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.203704
X	119539352	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.037037
X	119539365	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.5
X	119539368	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.375
10	119572211	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.666667
10	119572240	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	119572252	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.285714
10	119572272	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.266667
10	119572273	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.285714
10	119572310	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.583333
10	119572353	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	119572354	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.428571
10	119572357	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.1
10	119572383	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.173913
10	119572433	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.190476
10	119572450	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.416667
10	119572451	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.217391
10	119573209	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.268293
10	119573229	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.152174
10	119573235	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.117647
10	119573245	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.285714
10	119573274	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.097561
10	119573319	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.347826
X	120437941	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0294118
X	120437993	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0498339
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0786885
X	120438106	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0245399
12	120460750	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.484848
12	120460751	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	120460839	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.04
12	120460842	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0784314
12	120460858	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.146341
12	120460894	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	120460911	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.78125
12	120461140	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.394737
12	120461175	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0612245
12	120461195	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.125
12	120461196	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.195652
12	120461208	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	1
12	120461272	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.808511
12	120461358	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.027027
12	120461365	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	121778329	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	121778339	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	121778368	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	121778420	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	122027179	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.375
5	122027180	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.292683
5	122027209	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	123411103	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	123411180	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.615385
12	123411181	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	123411213	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	123411277	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	123411302	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123411415	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123411417	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123412196	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	123412239	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.5
12	123412280	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	123412306	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	123412413	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	123412414	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	123412421	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.3
12	123412436	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	123413113	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	123413114	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	123661548	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.4
12	123661553	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	123661590	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	123661766	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0493827
12	123661768	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0853659
12	123661770	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0235294
12	123661824	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0471698
12	123661825	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0458716
12	123661849	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	123661862	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.025974
12	123661870	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0352941
12	123662018	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0697674
12	123662050	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	123758650	A->G	+	ENSG00000185344	ATP6V0A2	protein_coding	three_prime_utr	.	.	Alu	0.025641
X	123909133	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	123909293	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123910614	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.16
X	123911535	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123912452	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	123912456	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	123912479	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	123912485	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.05
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.756098
X	123912567	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	123912590	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.4375
X	123912741	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.823529
X	123912748	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.277778
X	123912749	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.555556
X	123912789	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.185185
X	123912792	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.148148
X	123912794	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	123912830	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	123912836	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	123912839	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	123912845	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	123912865	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	123912870	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.818182
X	123912891	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123912908	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	123912920	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	123913198	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	123913243	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123913257	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.115385
X	123913262	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.413793
X	123913286	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.108108
X	123913296	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0571429
X	123913315	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.171429
X	123913319	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0857143
X	123913320	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.147059
X	123913323	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.5
X	123913420	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.194444
X	123913435	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0526316
9	124949253	A->G	-	ENSG00000173611	SCAI	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	124949562	A->G	-	ENSG00000173611	SCAI	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	125026680	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0847458
12	125026696	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.112676
12	125026697	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	125026765	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0352941
12	125026845	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0545455
12	125027412	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.558824
12	125027414	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.114286
12	125027415	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	125027420	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0857143
12	125027421	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	125027441	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.441176
12	125027483	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.37931
12	125027484	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.206897
12	125027486	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	125027523	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.444444
12	125027527	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.388889
12	125027555	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.466667
12	125027559	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.125
12	125027627	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.375
12	125027743	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.125
12	125027749	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.151515
12	125027752	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	125027814	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.48
12	125027817	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.538462
12	125027827	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	125027829	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	125027948	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.450704
12	125027949	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.694444
12	125027961	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.426667
12	125027963	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.103896
12	125027970	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	125029258	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0266667
12	125029411	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0612245
12	125029452	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0348837
11	125656230	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.125
11	125656240	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
11	125656244	A->G	+	ENSG00000149554	CHEK1	protein_coding	three_prime_utr	.	.	Alu	0.326531
11	125675961	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
11	125676008	A->G	+	ENSG00000134940	ACRV1	protein_coding	three_prime_utr	.	.	Alu	0.114286
5	126625355	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.357143
5	126625387	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.236842
5	126625390	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0789474
5	126625438	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0408163
5	126625454	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0540541
5	126625474	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.205128
5	126625476	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	126625477	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0540541
5	126625512	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0697674
5	126625517	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.178571
5	126625518	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.107143
5	126625554	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.190476
5	126625755	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.46875
5	126625763	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	126625771	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.21875
5	126625776	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	126625802	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.257143
5	126625840	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	126625842	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.192308
5	126625856	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.25
5	126625862	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.171429
5	126625897	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	126625931	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.102564
5	126625942	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0882353
5	126625956	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.147059
5	126625957	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	126626483	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.125
5	126626528	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.25
5	126626616	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	127843852	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0444444
2	127843857	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	127843864	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.06
2	127843890	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.737705
2	127843982	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	127844060	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	127844791	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	127844792	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.409091
2	127844878	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.137931
2	127844888	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	127844926	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	127845461	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	127845487	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0851064
2	127845504	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.205882
2	127845513	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.131579
2	127845514	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	127845540	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	127845545	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	127845557	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.478261
2	127845576	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.769231
2	127845578	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	127845582	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.233333
2	127845631	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	127846010	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.134615
2	127846037	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	127846038	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0333333
2	127846055	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0377358
2	127846080	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.735849
2	127846084	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	127846086	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	127846131	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.535714
2	127846141	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	127846170	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.27907
2	127846171	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	127846196	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.184211
4	128036575	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.1
4	128036930	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	128036931	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	128036972	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.210526
4	128036999	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	128037440	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.08
4	128037467	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.56
4	128037472	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.56
4	128037477	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.416667
4	128037573	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.242424
4	128037612	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	128191597	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0306122
2	128191699	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0215054
2	128192901	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0517241
2	128192907	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0677966
2	128192915	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0377358
2	128192917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.431373
2	128192923	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.877551
2	128192924	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.521739
2	128192941	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	128192968	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.590909
2	128192974	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	128193272	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	128193283	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	128193316	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	128193346	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	128193351	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	128193352	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	128193355	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	128193356	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	128193381	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.636364
2	128193391	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.423077
2	128193393	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	128193417	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	128193418	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.826087
2	128193426	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	128193432	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	128193435	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	128193452	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.317073
2	128193465	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0652174
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.455696
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.3875
2	128193533	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.4375
2	128193549	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0759494
2	128194146	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	128194149	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	128194173	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	128194192	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.131579
2	128194232	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	128194330	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	128194346	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0444444
2	128194367	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0862069
2	128194432	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.037037
2	128194433	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0365854
2	128194441	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0315789
2	128194447	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.032967
2	128194450	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0804598
2	128194467	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	128194476	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0560748
2	128194510	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	128194529	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	128195103	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.025
2	128195125	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0430108
2	128195126	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
7	128304944	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	128305442	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128305476	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.2
9	128305782	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.307692
9	128305828	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	128306515	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.2
9	128306546	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128306773	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.3
9	128306811	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.130435
9	128306844	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.526316
9	128306874	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	128307922	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	128307926	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.433333
9	128308787	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.25
9	128308789	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	128308799	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	128308835	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.444444
9	128309254	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0793651
9	128309300	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	128457792	A->G	+	ENSG00000135245	HILPDA	protein_coding	three_prime_utr	.	.	Alu	0.25
7	128457797	A->G	+	ENSG00000135245	HILPDA	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	128502723	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.1
7	128502779	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	128502885	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.08
7	128503235	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	128503539	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	128503568	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.25
7	128503878	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	128503891	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.08
9	129827928	A->G	-	ENSG00000136819	C9orf78	protein_coding	three_prime_utr	.	.	Alu	0.0223881
5	131201055	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.15
5	131201061	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.148148
5	131201104	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0555556
5	131201107	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	131201137	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0930233
5	131201149	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.12766
5	131201152	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0851064
5	131201154	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0638298
5	131201167	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	131201175	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.102564
5	131201193	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.297297
5	131201199	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	131201453	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.114286
5	131201461	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	131201462	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.135135
5	131201488	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	131201507	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201527	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.173913
5	131201530	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.208333
5	131201531	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.217391
5	131201540	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.103448
5	131201558	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
5	131201559	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	131201560	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.314286
5	131201572	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0540541
5	131201588	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.119048
5	131201598	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.113636
5	131201599	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.955556
5	131201664	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.302326
5	131201669	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.097561
5	131201694	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.404762
5	131201710	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
5	131201838	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.103448
5	131201874	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1
5	131201937	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1
5	131201951	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	131201961	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	131201963	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131202043	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.777778
5	131202054	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.26087
5	131202081	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.352941
5	131202086	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.375
5	131202096	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.1
5	131202108	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	131202239	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0961538
5	131202240	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0925926
5	131202266	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.245902
5	131202275	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.237288
5	131202280	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0333333
5	131202304	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.109589
5	131202309	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0519481
5	131202318	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.06
5	131202373	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.34
5	131202374	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.729167
5	131202379	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.365385
5	131202383	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.229167
5	131202387	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.207547
5	131202409	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.172414
5	131202443	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.291667
5	131202444	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.55102
5	131202581	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	131202612	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.375
5	131202615	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0789474
5	131202616	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.405405
5	131202629	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.21875
5	131202637	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.277778
5	131202638	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.162162
5	131202641	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0526316
5	131202645	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.605263
5	131202651	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.184211
5	131202669	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	131203422	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.125
5	131204142	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.361702
5	131204153	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.132075
5	131204168	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0806452
5	131204197	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	132721316	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0229885
12	132721318	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.45977
12	132721356	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0327869
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.296875
12	132721375	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0437956
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0977444
12	132721433	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.026087
12	132721467	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0609756
12	132721483	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0344828
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.173333
12	132721535	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.122807
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0849057
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.212963
12	132721689	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.027027
12	132721753	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.72619
12	132721754	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.146341
12	132721763	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.170455
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.444444
12	132721879	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0229885
12	132722351	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0394737
12	132722416	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0724638
12	132722430	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0277778
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.172414
12	132769969	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.121951
12	132769978	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	132770000	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.137255
12	132770042	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.15
12	132770861	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	132770916	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	134152638	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	134402211	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0638298
5	134402261	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0240964
5	134402303	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.029703
5	134402579	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0877193
5	134402580	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0350877
5	134829837	A->G	+	ENSG00000145833	DDX46	protein_coding	three_prime_utr	.	.	Alu	0.0555556
5	134829838	A->G	+	ENSG00000145833	DDX46	protein_coding	three_prime_utr	.	.	Alu	0.171429
5	134900488	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	134900509	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.380952
5	134900513	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.15
5	134900515	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	134900528	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	134900555	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	134900588	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	134900591	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.22
5	134900596	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.254545
5	134900597	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.0754717
5	134900608	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.0357143
5	134900621	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.0350877
5	134900888	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	134900899	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	135384291	A->G	-	ENSG00000080802	CNOT4	protein_coding	three_prime_utr	.	.	Alu	1
7	135676149	A->G	+	ENSG00000243317	STMP1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
X	136217857	A->G	-	ENSG00000129680	MAP7D3	protein_coding	three_prime_utr	.	.	Alu	0.192308
X	136217933	A->G	-	ENSG00000129680	MAP7D3	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	139045647	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.194444
4	139045723	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.161017
8	140516329	A->G	+	ENSG00000104472	CHRAC1	protein_coding	three_prime_utr	.	.	Alu	0.0263158
3	141945258	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141945262	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	141946785	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	141946786	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	141946865	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	141946904	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141946906	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.785714
3	141946916	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	141946941	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	141946945	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	141946946	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	141946965	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141946975	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	141947482	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	141947547	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.25
3	141947553	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	141947579	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141947585	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	141947588	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141948283	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	141948285	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
3	141948307	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.631579
3	141948312	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.21875
3	141948325	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.186047
3	141948376	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.275862
3	141948394	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	141948395	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.3
3	141948848	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.298507
3	141948860	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	141948915	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.52381
3	141948991	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.05
3	141949845	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	141949870	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	141949872	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	141949877	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	141949878	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.236842
3	141949900	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
3	141949905	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0784314
3	141949916	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.22807
3	141949932	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	141949936	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0344828
3	141949946	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0566038
3	141949972	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
3	141949976	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0410959
3	141949977	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0273973
3	141949978	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	141949986	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0675676
3	141949989	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.418919
3	141950000	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0724638
3	141950001	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.028169
3	141950002	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0972222
3	141950003	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0277778
3	141950023	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0405405
3	141950025	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0273973
3	141950026	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.506849
3	141950034	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.3
3	141950039	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.213333
3	141950079	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.146341
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.523256
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.68
8	143655372	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	143655373	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	143655481	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.545455
8	143655520	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.1875
8	143655545	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	143655546	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.421053
8	143655563	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.3125
8	143655937	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.125
1	145745275	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	145745370	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.466667
1	145745384	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	145745386	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	145745519	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.352941
1	145745521	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.552632
1	145745550	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	145745554	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.195652
1	145745595	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	145745596	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.354839
1	145745622	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	145745636	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	145745650	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	145746059	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	145746062	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	145746102	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.1
1	145746104	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.233333
1	145746126	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0681818
1	145746144	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0754717
1	145921967	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0425532
1	145921978	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.254902
1	145921979	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.358491
1	145921980	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.259259
1	145921994	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0625
1	145921998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.234375
1	145922002	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.03125
1	145922041	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.116667
1	145922056	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0862069
1	145922058	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0645161
1	145922061	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.118644
1	145922075	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.309091
1	145922076	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.326923
1	145922141	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.75
1	145922142	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.4375
1	145922148	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.828571
1	145922162	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.25641
1	145923014	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.772727
1	145923018	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.37931
1	145923019	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.172414
1	145923033	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.047619
1	145923068	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0625
1	145923078	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.65
1	145923094	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.661017
1	145923100	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0517241
1	145923101	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0526316
1	145923104	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0983607
1	145923108	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0793651
1	145923109	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.047619
1	145923130	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0377358
1	145923134	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0652174
1	145923163	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.395349
1	145925484	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.0684932
1	145925494	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.037037
6	149591088	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
6	149591103	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.195122
6	149591242	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	149591247	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	149724612	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	149724619	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	149724651	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.769231
6	149724652	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.714286
6	149724682	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	149724712	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.578947
6	149724716	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.125
6	149724721	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.25
6	149724722	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.125
6	149724724	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.388889
6	149724732	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	149724747	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.1
6	149724748	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	149724764	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	149724782	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.259259
6	149724783	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.185185
6	149724784	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.107143
6	149724790	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0967742
6	149724792	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.514286
6	149724793	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	149724815	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.243243
6	149724821	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	149724861	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.09375
6	149724862	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.451613
6	149724870	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.125
6	149725201	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	149725204	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	149725213	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.315789
6	149725279	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	149725296	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.4375
6	149725348	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.097561
6	149725349	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.146341
6	149725359	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.219512
6	149725409	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.59375
6	149725423	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.909091
6	149725426	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.108108
6	149725465	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.206897
6	149725467	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	149725477	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.4
6	149725502	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.258065
6	149725506	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	149725507	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.518519
6	149725537	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.666667
6	149725542	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.103448
6	149725550	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	149726151	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0677966
6	149726164	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0338983
6	149726226	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.108108
6	149726234	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0810811
6	149726240	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.209302
6	149726324	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	149983651	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.45
5	149983655	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.389831
5	149983656	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.576271
5	149983710	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
5	149983829	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.2
5	149983851	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.137931
5	149984404	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.12
5	149984405	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	149984540	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
1	150308645	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	150308646	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	150308715	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	150308716	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.368421
1	150308756	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.473684
1	150308757	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	150308768	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	150621411	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	150621412	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	150621414	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	150621549	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	150731136	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0392157
1	150731137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.247525
1	150731143	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0660377
1	150731158	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.127119
1	150731166	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0549451
1	150731171	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0461538
1	150731185	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0697674
1	150731196	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.146552
1	150731200	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.173077
1	150731203	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.04
1	150731216	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0956522
1	150731220	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0350877
1	150731221	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.443478
1	150731222	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.387931
1	150731225	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	150731231	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.023622
1	150731239	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0247934
1	150731240	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.110169
1	150731244	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	150731266	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0454545
1	150731269	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0223881
1	150731276	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.289855
1	150731288	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0375
1	150731301	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0334928
1	150731305	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0358974
1	150731311	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.21164
1	150731336	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0310881
1	150731374	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.377358
1	150731384	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0687023
1	150731936	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.020202
1	150731937	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.282828
1	150731942	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.132653
1	150731972	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0235294
1	150732000	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	150732005	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.267857
1	150732007	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.32
1	150732024	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0483871
1	150732068	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0697674
1	150732072	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	150732089	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0232558
1	150732092	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0235294
1	150732109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.118421
1	150732111	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0547945
1	150732129	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0603448
1	150732137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.127119
1	150732157	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.485437
1	150732160	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.12381
1	150732177	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0551181
1	150732178	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.10687
1	150732183	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.032
1	150732736	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.1
1	150732740	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0765306
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.11875
1	150732746	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.025
1	150732767	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0483871
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.205263
1	150732802	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.121495
1	150732810	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0522088
1	150732829	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0406504
1	150732856	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0456853
1	150732860	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.026738
1	150732861	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0218579
1	150996744	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	151119485	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	151123394	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	151268183	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.125
5	151268220	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.06
5	151268255	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0615385
5	151268295	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0673077
5	151268335	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0875
5	151268338	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0447761
5	151268414	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0253165
5	151268432	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.025641
1	151874503	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0416667
X	154011217	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
X	154011236	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0352941
X	154011309	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
1	155881846	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.037037
3	155941193	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.4
3	155941217	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.384615
3	155943021	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	155943045	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.125
3	155943110	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.4
3	155943111	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	155943150	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	155943172	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	155943176	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	155943179	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	156540416	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.470588
3	156540438	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.107843
3	156540441	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.135922
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.820225
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.489796
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.168421
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.26506
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.513889
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0610329
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.258065
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.326733
3	156541552	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.161905
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0961538
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.526316
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.466165
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
7	156970054	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.25
7	156970115	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	156970118	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	156970129	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.3125
7	156970133	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.307692
7	156970478	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.103448
7	156970489	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	156971486	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.151515
7	156972620	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.157895
7	156972771	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.222222
6	159679850	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	159680701	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.025641
1	160995497	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	160995524	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	160996511	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0224719
1	160996554	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0210526
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.213483
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.233333
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.247312
1	160996583	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.03125
1	160996603	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0597015
1	160996628	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0392157
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.75
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.192308
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.714286
1	160998064	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.08
1	160998066	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.24
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.4
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.414634
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.25641
1	160998106	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.125
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	160998148	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.169231
4	165075134	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	165075135	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.4
4	165075136	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	165075137	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	165075154	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	165075214	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.5
4	165075316	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	165075342	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.125
4	165075526	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	165075533	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.3
4	165075632	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	165075637	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.3
4	165075659	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	165075675	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	165075927	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	165075948	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	165075949	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	165075952	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.227273
4	165075953	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	165075962	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	165076997	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	165077000	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	165077490	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.12
4	165077502	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	165077562	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.277778
4	165077565	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	165077582	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	165077623	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.25
4	165077633	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	165077650	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.466667
4	165078036	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.125
4	165078037	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.125
4	165078954	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	165078994	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	165078996	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	165874182	A->G	-	ENSG00000123607	TTC21B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	168244389	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	168244413	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0787402
1	168244441	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0704225
1	168244453	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.025641
1	168249256	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0759494
1	168249284	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0449438
1	168249305	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.102273
1	168249335	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0306122
1	168251094	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	168251103	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	168251125	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	168251169	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	168251189	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
1	168251225	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	168251237	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.106667
1	168251251	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0757576
5	168549861	A->G	-	ENSG00000120137	PANK3	protein_coding	three_prime_utr	.	.	Alu	0.0487805
2	171323331	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	171323427	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	171323430	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	173800000	A->G	-	ENSG00000120334	CENPL	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	175529218	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	179073445	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.6
1	179073455	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.4
1	179073481	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	179073557	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.128205
1	179073562	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.233766
1	179073566	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.289474
1	179074957	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.07
1	179074961	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.03
1	179074965	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.206186
1	179074970	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	179074975	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.0990099
1	179075045	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.7
1	179075071	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.526316
1	179075081	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	179075107	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	179075117	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.461538
1	179075144	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.1
3	179337494	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	179357403	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	179357773	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.565217
1	179357787	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	179397783	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.03125
3	179397833	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	179397839	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.867347
3	179397847	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.342466
3	179397857	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.04
3	179397868	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	179397907	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.259259
3	179397909	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.08
3	179397910	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.28
3	179397913	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.478261
3	179397924	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	179397996	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	179398001	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	179398002	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.457143
3	179398008	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	179398010	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.121212
3	179398024	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.151515
3	179398258	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	179398270	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	179398271	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	179398280	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.705882
3	179398286	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	179398289	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	179398332	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	179398349	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.533333
3	179398358	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	179398367	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.4
3	179398429	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	179399245	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0961538
3	179399314	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.03125
3	179399340	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0655738
3	179399367	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0350877
3	179399376	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0422535
3	179399411	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0215054
3	179399445	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0416667
3	179399453	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	179399454	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0363636
1	184791989	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.407407
1	184791990	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	184791991	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.16
1	184791995	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	184792028	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0681818
1	184792045	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0731707
1	184792054	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.23913
1	184792136	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	184792137	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.116279
1	184792140	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.560976
1	184792159	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
1	184792178	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.163265
1	184792216	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.170732
1	184792227	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	184793326	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0595238
1	184793338	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.135417
1	184793353	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	184793364	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0483871
1	184793388	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0652174
1	184793390	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.255319
1	184793447	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.138889
1	184793456	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.146341
1	184793493	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	184793542	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	196352418	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0724638
3	196352421	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0298507
3	196352422	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0746269
3	196352434	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	196352518	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.08
3	196352519	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	196352541	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.173913
3	196352735	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.037037
3	196352737	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.132075
3	196352749	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.235294
3	196352750	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.102041
3	196352812	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	196352820	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.3
3	196352826	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	196353657	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.2
3	196734352	A->G	+	ENSG00000163964	PIGX	protein_coding	three_prime_utr	.	.	Alu	0.16
3	196734363	A->G	+	ENSG00000163964	PIGX	protein_coding	three_prime_utr	.	.	Alu	0.148148
3	197884337	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	197884392	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.3125
3	197884875	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	197884887	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.1
3	197885349	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.470588
3	197885396	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	197885397	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	200909450	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	200909486	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	200909512	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.695652
2	200909521	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.380952
2	200909541	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	200909618	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	200909877	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	200909902	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.125
2	200909918	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	200909945	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.3
2	200909962	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	1
2	200910051	A->G	-	ENSG00000115942	ORC2	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	200977600	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.393939
2	200977668	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.375
2	200977678	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	200977685	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	200977688	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	200977694	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.121212
2	200977711	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.259259
2	200977756	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	200977769	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	200977795	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	200977808	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	200977838	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	200977846	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.5
2	200978572	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.35
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	200978680	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	200978741	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	200978747	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	200978748	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	201164002	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	201164004	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.121212
2	201164010	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.138889
2	201164011	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	201164088	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.131579
2	201164109	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0930233
2	201164144	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	201165371	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	201165388	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.28
2	201167246	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	201167384	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	201217945	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	201218007	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.241379
2	201218013	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	201218039	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	201218334	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.2
2	201218512	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	201218522	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	201219050	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	201219149	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.56
2	201219150	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.18
2	201219176	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	201219191	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	201219195	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.2
2	201286733	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	201287278	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	202875527	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	202875581	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	202875620	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.25
2	202876719	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	202876735	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.26087
2	202876819	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.533333
2	202879116	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.4
2	202879169	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	202879513	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.25
2	202879517	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	202879518	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	202879552	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	202879635	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	202879636	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	202879827	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	202879857	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	202879858	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	202879906	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	202879921	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.192308
2	202879935	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	202880331	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0816327
2	202880382	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.16
2	202880385	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	203297313	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	203297320	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	203297580	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	203297587	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	203297722	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	203297723	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	203297772	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	203297807	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	203297865	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.269231
2	203297874	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	203297878	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	203297930	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	203298267	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	203305461	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	203305474	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	206116641	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	206116656	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	206117108	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	206117111	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	206117112	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.241379
2	206117132	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	206117150	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	206117172	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	206117571	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	206117572	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	206118408	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	206118409	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	206118414	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	206118526	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	206118531	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	206118543	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	206118574	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	206119005	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.387097
2	206119006	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.6
2	206121509	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	206121522	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	206121567	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	206121590	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	206121591	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	206121724	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.461538
2	206121731	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	206122207	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	206122212	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.344828
2	206122248	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	206122254	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	206122264	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	206122372	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	206122384	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	206122385	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	206122412	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	206122418	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.386364
2	206122466	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.366667
2	206122472	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.151515
2	206122480	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	206122504	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.723404
2	206122505	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.3125
2	206122507	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	206122529	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.218182
2	206122546	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.627119
2	206122591	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.116279
2	206122801	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	206122808	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	206122837	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.361111
2	206122873	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.323529
2	206122875	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	206122899	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	206122903	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	206122905	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	206122908	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.15625
2	206122910	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	206122912	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	206122913	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	206122914	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	206122928	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	206123001	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	207754653	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	207754697	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	207754737	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	207754738	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	207754755	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.657143
2	207754767	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	207754779	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	207754926	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.407407
2	207754928	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	207754938	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.173913
2	207754945	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	207754951	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	207754969	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.151515
2	207754975	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.16
2	207755018	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.806452
2	207755025	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.757576
2	207755065	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	207755281	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.121212
2	207755282	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	207755380	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.110169
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.265734
2	216501798	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0212766
2	216501817	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.171779
2	216501847	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0863309
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.535948
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.233083
2	216501875	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0819672
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.101852
2	216501903	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.045045
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0641026
2	216501950	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.04
2	216501951	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.106383
2	216501976	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	216501990	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.714286
2	216502077	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	216502098	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0444444
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.101695
2	216502174	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	216502175	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0547945
2	216502176	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0410959
2	216502177	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.028169
2	216502196	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0547945
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.253521
2	216502206	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.123457
2	216502207	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0595238
2	216502236	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0350877
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.059322
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.04
2	219075511	A->G	-	ENSG00000187736	NHEJ1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	220057921	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.5
1	220057933	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.444444
1	220057934	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	220057988	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.780488
1	220057996	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	220058005	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.108108
1	220058113	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.160714
1	220058119	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	220058129	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	220058142	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	220058145	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.52
1	220058604	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.172414
1	220058617	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.828571
1	220058621	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.32
1	220058629	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
1	220058640	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
1	220058646	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
1	220058655	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.05
1	220058669	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.0784314
1	220058796	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	220058801	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.5625
1	220058802	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.470588
2	223757127	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	225786972	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	225983639	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0897436
1	225983676	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0410959
1	225983699	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.08
1	245122731	A->G	+	ENSG00000203666	EFCAB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
MT	14233	A->G	+	ENSG00000198695	MT-ND6	protein_coding	CDS	.	.	Alu	1
8	93724528	A->G	-	ENSG00000188343	FAM92A	protein_coding	CDS	.	.	Alu	0.2
8	93724544	A->G	-	ENSG00000188343	FAM92A	protein_coding	CDS	.	.	Alu	0.153846
1	149887304	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.515152
1	149887567	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.126667
1	149887568	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.05
1	149887575	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.225589
1	149887584	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.681529
1	149887592	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.198556
8	143295440	A->G	-	ENSG00000185730	ZNF696	protein_coding	CDS	.	.	Alu	0.103448
8	143295450	A->G	-	ENSG00000185730	ZNF696	protein_coding	CDS	.	.	Alu	0.0666667
8	143295452	A->G	-	ENSG00000185730	ZNF696	protein_coding	CDS	.	.	Alu	0.172414
4	1892220	A->G	+	ENSG00000109685	NSD2	protein_coding	five_prime_utr	.	.	Alu	0.15
12	6943922	A->G	+	ENSG00000111678	C12orf57	protein_coding	five_prime_utr	.	.	Alu	0.453125
16	4483692	A->G	+	ENSG00000153406	NMRAL1	protein_coding	five_prime_utr	.	.	Alu	0.125
16	4483712	A->G	+	ENSG00000153406	NMRAL1	protein_coding	five_prime_utr	.	.	Alu	0.266667
19	2291964	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.166667
19	3540007	A->G	-	ENSG00000183397	C19orf71	protein_coding	five_prime_utr	.	.	Alu	0.117647
19	3540035	A->G	-	ENSG00000183397	C19orf71	protein_coding	five_prime_utr	.	.	Alu	0.125
19	8418655	A->G	+	ENSG00000099785	2-Mar	protein_coding	five_prime_utr	.	.	Alu	0.166667
19	9433696	A->G	-	ENSG00000174652	ZNF266	protein_coding	five_prime_utr	.	.	Alu	0.1
19	9433707	A->G	-	ENSG00000174652	ZNF266	protein_coding	five_prime_utr	.	.	Alu	0.1
1	16594651	A->G	-	ENSG00000219481	NBPF1	protein_coding	five_prime_utr	.	.	Alu	0.478261
1	20774286	A->G	-	ENSG00000127483	HP1BP3	protein_coding	five_prime_utr	.	.	Alu	0.111111
1	20774875	A->G	-	ENSG00000127483	HP1BP3	protein_coding	five_prime_utr	.	.	Alu	0.133333
1	23959998	A->G	+	ENSG00000189266	PNRC2	protein_coding	five_prime_utr	.	.	Alu	0.234043
1	93346086	A->G	+	ENSG00000117505	DR1	protein_coding	five_prime_utr	.	.	Alu	0.329268
2	33481223	A->G	+	ENSG00000152689	RASGRP3	protein_coding	five_prime_utr	.	.	Alu	0.0888889
2	33481301	A->G	+	ENSG00000152689	RASGRP3	protein_coding	five_prime_utr	.	.	Alu	0.117647
3	17562035	A->G	-	ENSG00000131374	TBC1D5	protein_coding	five_prime_utr	.	.	Alu	0.0645161
3	41221475	A->G	+	ENSG00000168036	CTNNB1	protein_coding	five_prime_utr	.	.	Alu	0.0555556
3	48708123	A->G	-	ENSG00000068745	IP6K2	protein_coding	five_prime_utr	.	.	Alu	0.24
3	48708195	A->G	-	ENSG00000068745	IP6K2	protein_coding	five_prime_utr	.	.	Alu	0.0769231
3	48924761	A->G	+	ENSG00000177479	ARIH2	protein_coding	five_prime_utr	.	.	Alu	0.117647
3	48924800	A->G	+	ENSG00000177479	ARIH2	protein_coding	five_prime_utr	.	.	Alu	0.0645161
3	49087074	A->G	-	ENSG00000198218	QRICH1	protein_coding	five_prime_utr	.	.	Alu	0.133333
4	86932278	A->G	-	ENSG00000284968	AC093827.4	antisense	five_prime_utr	.	.	Alu	0.2
6	26172398	A->G	+	ENSG00000283064	AL353759.1	antisense	five_prime_utr	.	.	Alu	0.133333
8	38247233	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.2
8	38247234	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.545455
8	38247381	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.272727
8	38247382	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.272727
8	38247394	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.333333
10	16437438	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.147059
10	16437439	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.166667
10	72220115	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.1
10	72220129	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0465116
11	17291351	A->G	+	ENSG00000070081	NUCB2	protein_coding	five_prime_utr	.	.	Alu	0.0273973
12	31074082	A->G	+	ENSG00000013573	DDX11	protein_coding	five_prime_utr	.	.	Alu	0.5625
12	68641044	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.166667
14	55601863	A->G	+	ENSG00000126777	KTN1	protein_coding	five_prime_utr	.	.	Alu	0.0588235
16	18900010	A->G	-	ENSG00000157106	SMG1	protein_coding	five_prime_utr	.	.	Alu	0.583333
16	69783111	A->G	+	ENSG00000198373	WWP2	protein_coding	five_prime_utr	.	.	Alu	0.272727
17	28672805	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.333333
18	12869028	A->G	-	ENSG00000175354	PTPN2	protein_coding	five_prime_utr	.	.	Alu	0.285714
18	12869038	A->G	-	ENSG00000175354	PTPN2	protein_coding	five_prime_utr	.	.	Alu	0.214286
19	11946877	A->G	+	ENSG00000267274	AC008770.3	sense_overlapping	five_prime_utr	.	.	Alu	0.4
19	16081465	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.170732
19	16081470	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.05
19	19427923	A->G	+	ENSG00000167491	GATAD2A	protein_coding	five_prime_utr	.	.	Alu	0.1
19	37324887	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.08
19	37324904	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.15
19	37324914	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.2
19	44662304	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.25
19	44662309	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.142857
19	44662356	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.0909091
19	45861976	A->G	-	ENSG00000125755	SYMPK	protein_coding	five_prime_utr	.	.	Alu	0.3
20	49179171	A->G	-	ENSG00000124214	STAU1	protein_coding	five_prime_utr	.	.	Alu	0.142857
2	232724601	A->G	+	ENSG00000204120	GIGYF2	protein_coding	five_prime_utr	.	.	Alu	0.0606061
3	177160913	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	five_prime_utr	.	.	Alu	0.142857
3	177160936	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	five_prime_utr	.	.	Alu	0.117647
5	163437663	A->G	+	ENSG00000113328	CCNG1	protein_coding	five_prime_utr	.	.	Alu	0.516667
6	159788418	A->G	-	ENSG00000120438	TCP1	protein_coding	five_prime_utr	.	.	Alu	0.0769231
8	100935031	A->G	-	ENSG00000164924	YWHAZ	protein_coding	five_prime_utr	.	.	Alu	0.04
8	143590715	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.583333
8	143590737	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.181818
12	103967929	A->G	+	ENSG00000139372	TDG	protein_coding	five_prime_utr	.	.	Alu	0.166667
12	123459694	A->G	+	ENSG00000184209	SNRNP35	protein_coding	five_prime_utr	.	.	Alu	0.307692
14	106557400	A->G	-	ENSG00000211965	IGHV3-49	IG_V_gene	five_prime_utr	.	.	Alu	0.0980392
GL000205.2	56231	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
GL000219.1	99260	A->G	-	.	.	.	Intergenic	.	.	Alu	1
KI270713.1	21693	A->G	-	.	.	.	Intergenic	.	.	Alu	0.41791
MT	146	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	16126	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	16519	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	263	A->G	+	.	.	.	Intergenic	.	.	Alu	1
MT	73	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	101007484	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	101007547	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
X	101164390	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
X	101164394	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
X	101164431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	101164432	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	101164435	A->G	+	.	.	.	Intergenic	.	.	Alu	0.533333
X	101164461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	101342889	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
X	101343049	A->G	-	.	.	.	Intergenic	.	.	Alu	0.615385
X	101343389	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
X	101343407	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
X	101343504	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	101405021	A->G	-	ENSG00000257529	RPL36A-HNRNPH2	protein_coding	Intergenic	.	.	Alu	0.153846
X	101405124	A->G	-	ENSG00000257529	RPL36A-HNRNPH2	protein_coding	Intergenic	.	.	Alu	0.133333
X	120620392	A->G	-	ENSG00000232119	MCTS1	protein_coding	Intergenic	.	.	Alu	0.181818
X	124067386	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.3
X	124067448	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	1
X	1311237	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	133404795	A->G	-	ENSG00000076716	GPC4	protein_coding	Intergenic	.	.	Alu	0.2
X	1377744	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.466667
X	1377758	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.384615
X	1381116	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.375
X	1381605	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.529412
X	1381606	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.176471
X	1382090	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.363636
X	1382257	A->G	-	ENSG00000185291	IL3RA	protein_coding	Intergenic	.	.	Alu	0.210526
X	1383328	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	1383562	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0465116
X	1383971	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
X	1441556	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.181818
X	1481265	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	0.181818
X	15792275	A->G	+	ENSG00000169249	ZRSR2	protein_coding	Intergenic	.	.	Alu	0.181818
X	16721344	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.117647
X	16728856	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.142857
X	16733765	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.333333
X	16733766	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.25
X	16736560	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0909091
X	16736573	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.181818
X	16736578	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.181818
X	16736584	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.105263
X	16736603	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.176471
X	16736604	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.176471
X	16736643	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.307692
X	16736697	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.230769
X	16736708	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.142857
X	16736719	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.117647
X	16736760	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.192308
X	16737130	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.157895
X	16737132	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.1
X	16737196	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0909091
X	16737264	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.157895
X	16737300	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.117647
X	16738145	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.416667
X	16738190	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.1875
X	16738229	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.230769
X	16738621	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.181818
X	16738622	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.181818
X	16738667	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.133333
X	16750967	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.4
X	16751028	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.3
X	18921363	A->G	-	ENSG00000044446	PHKA2	protein_coding	Intergenic	.	.	Alu	0.3
X	23701610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	23701671	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	24018917	A->G	-	ENSG00000174010	KLHL15	protein_coding	Intergenic	.	.	Alu	0.333333
X	24018920	A->G	-	ENSG00000174010	KLHL15	protein_coding	Intergenic	.	.	Alu	0.181818
X	24018921	A->G	-	ENSG00000174010	KLHL15	protein_coding	Intergenic	.	.	Alu	0.181818
X	24018994	A->G	-	ENSG00000174010	KLHL15	protein_coding	Intergenic	.	.	Alu	0.166667
X	24075951	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.333333
X	24075956	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.230769
X	24075966	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.333333
X	24180511	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.181818
X	24180621	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.153846
X	24180622	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.230769
X	2660325	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2693204	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.45
X	2694487	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.047619
X	2694538	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0540541
X	2694544	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.131579
X	2694630	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2694632	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0869565
X	2694633	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.173913
X	2694682	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.192308
X	2694687	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0714286
X	2695299	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.111111
X	2695791	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.181818
X	2695831	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.16129
X	2695854	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.0909091
X	2696041	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.611111
X	2696178	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.375
X	2697482	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.527778
X	2699362	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2706426	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.545455
X	2710160	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.666667
X	2710950	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.692308
X	2711037	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.454545
X	2718041	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2726950	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.3
X	2729982	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.117647
X	2729988	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.111111
X	2729992	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.111111
X	2730079	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.4
X	2730272	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.181818
X	2730314	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.25
X	2730354	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.1875
X	2730379	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.714286
X	2730383	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.142857
X	2730440	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.263158
X	2730446	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.1
X	2734559	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2734568	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2738948	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.133333
X	2739543	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.166667
X	2743811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	303493	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	303494	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	303993	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	30732650	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	38309745	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.363636
X	38310056	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.3
X	38310173	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.0833333
X	38310228	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.352941
X	38310230	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.294118
X	38324261	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.214286
X	38324360	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.0909091
X	38324913	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.192308
X	38325046	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.142857
X	38325058	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.0952381
X	38325131	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.266667
X	41102543	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.142857
X	41102578	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.133333
X	41163496	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.2
X	41163497	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.2
X	41163503	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.272727
X	44881358	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.133333
X	44881744	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.272727
X	44881751	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.153846
X	44881752	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.307692
X	45764461	A->G	-	ENSG00000270069	MIR222HG	lincRNA	Intergenic	.	.	Alu	1
X	47151204	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.166667
X	47152056	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.117647
X	53419441	A->G	-	ENSG00000072501	SMC1A	protein_coding	Intergenic	.	.	Alu	0.272727
X	53419444	A->G	-	ENSG00000072501	SMC1A	protein_coding	Intergenic	.	.	Alu	0.181818
X	54562704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
X	54563297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
X	54563341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.116883
X	54563551	A->G	+	.	.	.	Intergenic	.	.	Alu	0.025974
X	54563585	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03125
X	54564472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0652174
X	54564573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
X	54564645	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
X	54564765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54564789	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
X	54564798	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0545455
X	54564808	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0338983
X	54564813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.031746
X	54564860	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
X	54564889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
X	54564969	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
X	54565900	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	54565921	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
X	54565938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
X	54566055	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
X	54566056	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
X	54566095	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
X	54566799	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	54566843	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
X	54566848	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
X	54567391	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
X	54567392	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	54567558	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54567578	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	57090429	A->G	-	.	.	.	Intergenic	.	.	Alu	0.636364
X	57090434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	71056296	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	71293812	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.117647
X	71293873	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.5
X	71552489	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.2
X	74260840	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74261939	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74274999	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.8
X	74275046	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.230769
X	74275057	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.266667
X	74275417	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74275462	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25
X	74275463	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74275468	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.615385
X	74275469	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.307692
X	74275970	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.266667
X	74276042	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74276048	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.6
X	74276068	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.470588
X	74276120	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.214286
X	74276415	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.117647
X	74276434	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25
X	74277166	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.454545
X	74277190	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74277191	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25
X	74277196	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74277853	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74277856	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74277863	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3
X	74277889	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74277892	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.272727
X	74277920	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.7
X	74277933	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.5
X	77775820	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.3
X	77883664	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.111111
X	77884069	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.363636
X	77884071	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.333333
X	77884093	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.545455
X	78115982	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.266667
X	85257771	A->G	+	ENSG00000147180	ZNF711	protein_coding	Intergenic	.	.	Alu	0.9
X	85258031	A->G	+	ENSG00000147180	ZNF711	protein_coding	Intergenic	.	.	Alu	0.909091
X	85258260	A->G	+	ENSG00000147180	ZNF711	protein_coding	Intergenic	.	.	Alu	0.3
X	85258261	A->G	+	ENSG00000147180	ZNF711	protein_coding	Intergenic	.	.	Alu	0.6
Y	12907849	A->G	+	ENSG00000067048	DDX3Y	protein_coding	Intergenic	.	.	Alu	0.0625
Y	12907886	A->G	+	ENSG00000067048	DDX3Y	protein_coding	Intergenic	.	.	Alu	0.0571429
Y	13246052	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
Y	13246053	A->G	-	.	.	.	Intergenic	.	.	Alu	0.8
Y	13246058	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
Y	13246157	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
Y	13246228	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
Y	13246229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
Y	13247645	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
Y	13250222	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.230769
Y	13250223	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.153846
Y	13459069	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.272727
Y	13464966	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.111111
Y	13467109	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.117647
Y	13467119	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.176471
Y	13467185	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.1
Y	13467688	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.125
Y	13467689	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.2
Y	13468471	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.333333
Y	13475904	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.0689655
Y	19071324	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.2
Y	19072997	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.2
Y	19072998	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.533333
Y	19073020	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.166667
Y	19740031	A->G	-	ENSG00000012817	KDM5D	protein_coding	Intergenic	.	.	Alu	0.166667
Y	19740032	A->G	-	ENSG00000012817	KDM5D	protein_coding	Intergenic	.	.	Alu	0.2
Y	2937227	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.0833333
Y	2937266	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.0714286
Y	2937273	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.0714286
Y	2938647	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.111111
Y	2938717	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.142857
Y	2938764	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.214286
Y	2938812	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.214286
Y	7276909	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
Y	7278171	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
Y	7278172	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
Y	7278216	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
Y	7278836	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
Y	7278848	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
Y	7278973	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
Y	7278981	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
Y	7282137	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
Y	7282142	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
Y	7282714	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
Y	7330553	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
Y	7331360	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
Y	7331365	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
Y	7331570	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.12
Y	7331571	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0769231
Y	7333442	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
4	378362	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intergenic	.	.	Alu	0.6
4	378369	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intergenic	.	.	Alu	0.4
4	378409	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intergenic	.	.	Alu	0.272727
4	378442	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intergenic	.	.	Alu	0.6
4	379444	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intergenic	.	.	Alu	0.3
4	777590	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.117647
4	777683	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.333333
4	778780	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.166667
4	779076	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.133333
4	779169	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.125
4	779215	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.2
4	779494	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.285714
4	779509	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.333333
4	985982	A->G	-	ENSG00000145214	DGKQ	protein_coding	Intergenic	.	.	Alu	0.166667
7	973549	A->G	-	ENSG00000240230	COX19	protein_coding	Intergenic	.	.	Alu	0.125
9	424463	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.181818
9	424471	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.2
9	424522	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.363636
10	916504	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.166667
10	916571	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.117647
10	916608	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.153846
10	916612	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.5
10	916656	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.333333
10	916682	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.181818
10	916795	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.714286
10	916799	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.357143
10	916872	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0869565
10	916873	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.434783
10	916874	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.272727
10	916875	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.142857
10	928679	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0571429
10	928689	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0952381
10	928696	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.285714
10	928757	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.130435
10	928764	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.304348
10	929338	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0714286
10	929415	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.148148
10	929432	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.16129
10	929473	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.133333
10	929496	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0666667
10	929509	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0909091
10	929538	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0606061
10	990005	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.08
10	999131	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.117647
10	999149	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.333333
10	999174	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.1
10	999188	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.15
10	999212	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.352941
10	999260	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.166667
10	999304	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.181818
10	999389	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.230769
10	999710	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.142857
10	999808	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.105263
10	999812	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.5
10	999848	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.166667
11	508602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
11	508611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
12	378378	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.1875
12	378422	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.153846
12	378427	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.142857
12	378442	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.1875
12	380071	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.2
12	380146	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.230769
12	380168	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.2
12	380172	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.125
12	380709	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.2
12	380893	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.181818
12	380898	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.153846
12	381385	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.25
12	381899	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.111111
12	382416	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.125
12	382820	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.333333
12	382849	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.285714
12	382856	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.153846
12	382869	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.230769
12	382893	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.3
12	383317	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.2
12	383339	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.615385
12	383353	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.125
12	765073	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.2
12	874076	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.25
12	874095	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.25
16	210929	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.3
16	212856	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.25
16	214949	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.230769
16	214975	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	217884	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.181818
16	222506	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	222508	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	222516	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.615385
16	222576	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	225741	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.3
17	399572	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
17	399620	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	446961	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	489422	A->G	-	.	.	.	Intergenic	.	.	Alu	0.692308
18	161057	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.125
18	168574	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.0769231
18	168576	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.0689655
18	168577	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.266667
18	168578	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.1
18	168584	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.0645161
18	168600	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.111111
18	168624	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.1
18	168635	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.222222
18	168696	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.181818
18	168997	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.181818
18	185965	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.272727
18	186191	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.2
18	186247	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.25
18	186255	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.294118
18	711061	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.125
18	711062	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.125
18	802419	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.117647
19	694446	A->G	-	ENSG00000185198	PRSS57	protein_coding	Intergenic	.	.	Alu	0.272727
19	809126	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.1
19	809174	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	809175	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	809192	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	809267	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.153846
19	809268	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.153846
19	810057	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.230769
19	810120	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.25
19	810187	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.125
19	830552	A->G	+	ENSG00000172232	AZU1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	854252	A->G	+	ENSG00000197561	ELANE	protein_coding	Intergenic	.	.	Alu	0.181818
19	854256	A->G	+	ENSG00000197561	ELANE	protein_coding	Intergenic	.	.	Alu	0.2
19	855060	A->G	+	ENSG00000197561	ELANE	protein_coding	Intergenic	.	.	Alu	0.333333
19	855064	A->G	+	ENSG00000197561	ELANE	protein_coding	Intergenic	.	.	Alu	0.142857
19	855115	A->G	+	ENSG00000197561	ELANE	protein_coding	Intergenic	.	.	Alu	0.4
20	317109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
1	1397753	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.117647
1	1397789	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.470588
1	1397805	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.142857
1	1397808	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.142857
1	1646520	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.2
1	1647255	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.75
1	1647280	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.727273
1	1870313	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1875246	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1875320	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.133333
1	1879992	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.148148
1	1880109	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	1880115	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.08
1	1881512	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3
1	1881603	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	1883046	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.125
1	1883047	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.117647
1	1887701	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1887731	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.133333
1	1887737	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.133333
1	1887793	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1875
1	1887794	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1875
1	1887814	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3
1	1888704	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.157895
1	1888716	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.285714
1	1888738	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.25
1	1888755	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.15
1	1888846	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1889594	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.105263
1	1889595	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.105263
1	6191019	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.142857
1	6191916	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.2
1	6192125	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.545455
1	6192164	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.416667
1	6192187	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.133333
1	6192213	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.384615
1	6192246	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.571429
1	8876751	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	8876872	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	8876910	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.0465116
1	8876911	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.119048
1	8876913	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.146341
1	9547952	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.181818
1	9550742	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.166667
1	9557038	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.181818
1	9557534	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.111111
1	9557538	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.111111
1	9557539	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.0740741
1	9557540	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.111111
1	9560049	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.133333
1	9563764	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.25
1	9564874	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.0740741
1	9564912	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.0666667
1	9574251	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.363636
1	9574292	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.230769
1	9581529	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.181818
1	9927557	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.05
1	9928767	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0681818
1	9928847	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.136364
2	3556470	A->G	-	ENSG00000171865	RNASEH1	protein_coding	Intergenic	.	.	Alu	0.2
2	7047326	A->G	+	ENSG00000151692	RNF144A	protein_coding	Intergenic	.	.	Alu	0.416667
2	7047344	A->G	+	ENSG00000151692	RNF144A	protein_coding	Intergenic	.	.	Alu	0.363636
2	7047368	A->G	+	ENSG00000151692	RNF144A	protein_coding	Intergenic	.	.	Alu	0.636364
2	7047369	A->G	+	ENSG00000151692	RNF144A	protein_coding	Intergenic	.	.	Alu	0.636364
2	7047377	A->G	+	ENSG00000151692	RNF144A	protein_coding	Intergenic	.	.	Alu	0.416667
2	9507345	A->G	-	ENSG00000239300	AC080162.1	antisense	Intergenic	.	.	Alu	0.2
2	9507402	A->G	-	ENSG00000239300	AC080162.1	antisense	Intergenic	.	.	Alu	0.6
2	9515520	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.266667
2	9515525	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.153846
2	9516365	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.272727
2	9523967	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.0909091
2	9531034	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.117647
2	9531063	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.133333
2	9532696	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.294118
2	9532997	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.208333
2	9533077	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.294118
2	9533106	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.166667
2	9533113	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.133333
2	9533129	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.166667
2	9533532	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3
2	9541477	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.125
2	9541873	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.142857
2	9542800	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.1875
2	9542889	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.176471
2	9542890	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.125
2	9549191	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.588235
2	9549247	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.125
2	9549309	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.0909091
2	9549353	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.266667
2	9549558	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.269231
2	9549564	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.214286
2	9549566	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.392857
2	9549567	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.333333
2	9549617	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.1
2	9549620	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.428571
2	9549678	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.111111
2	9549714	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.157895
2	9549715	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.105263
2	9549774	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.142857
2	9550498	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.3
2	9550513	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.333333
2	9550514	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.363636
2	9550531	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.153846
2	9550648	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.0952381
2	9550718	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.473684
2	9550836	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9550999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.117647
2	9596901	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.2
2	9617682	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.181818
2	9617832	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.238095
2	9617844	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.1
2	9617891	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.176471
2	9618599	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.153846
2	9618604	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.153846
2	9624881	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.210526
2	9625140	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.333333
2	9625162	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.230769
2	9625179	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.111111
2	9625205	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.0952381
2	9625210	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.5
2	9625215	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.176471
2	9625226	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.133333
2	9627612	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.117647
2	9935792	A->G	+	.	.	.	Intergenic	.	.	Alu	0.470588
2	9935865	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	5123943	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	5123967	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0377358
3	5124082	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	5124535	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	5127670	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.125
3	5129762	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0454545
3	5129763	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.106383
3	5129783	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0526316
3	5130287	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0571429
3	9652498	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9982810	A->G	-	ENSG00000125037	EMC3	protein_coding	Intergenic	.	.	Alu	0.2
4	1292997	A->G	+	ENSG00000090316	MAEA	protein_coding	Intergenic	.	.	Alu	0.181818
4	1292998	A->G	+	ENSG00000090316	MAEA	protein_coding	Intergenic	.	.	Alu	0.181818
4	1706200	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.2
4	2483713	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.3
4	2497894	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2539094	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2539474	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.153846
4	2539642	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.434783
4	2539668	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.111111
4	2539669	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2542190	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
4	2542226	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2547300	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.25
4	2556525	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.272727
4	2556548	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.333333
4	2556597	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.25
4	6789931	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.5
4	8458729	A->G	+	ENSG00000155275	TRMT44	protein_coding	Intergenic	.	.	Alu	0.235294
4	9538553	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
4	9538558	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
5	6630443	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.190476
5	6630470	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.25
6	3070603	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.285714
6	3070604	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.142857
6	3070621	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.363636
6	3078172	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.181818
6	4035847	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.181818
6	4788019	A->G	+	ENSG00000153046	CDYL	protein_coding	Intergenic	.	.	Alu	0.166667
6	4821688	A->G	+	ENSG00000153046	CDYL	protein_coding	Intergenic	.	.	Alu	0.142857
6	4821691	A->G	+	ENSG00000153046	CDYL	protein_coding	Intergenic	.	.	Alu	0.166667
6	7119175	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.105263
6	7119180	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.142857
6	7119283	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.333333
6	7119292	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.125
6	7120347	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
6	7120369	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.533333
6	7120375	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
6	7120379	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.133333
6	7123222	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.0833333
6	7123232	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.08
6	7228606	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.4
7	2369876	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.4
7	2369877	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.2
7	2369878	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.2
7	2370221	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.111111
7	2370222	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.111111
7	2370266	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.75
7	2370315	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.214286
7	2370326	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.142857
7	2370330	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.153846
7	2370362	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.307692
7	2370366	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.1875
7	2370383	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.285714
7	2370389	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.125
7	4756184	A->G	+	ENSG00000164916	FOXK1	protein_coding	Intergenic	.	.	Alu	0.3
7	4786840	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.117647
7	4992457	A->G	+	ENSG00000272968	RBAK-RBAKDN	protein_coding	Intergenic	.	.	Alu	0.2
7	4992493	A->G	+	ENSG00000272968	RBAK-RBAKDN	protein_coding	Intergenic	.	.	Alu	0.272727
7	5003209	A->G	+	ENSG00000272968	RBAK-RBAKDN	protein_coding	Intergenic	.	.	Alu	0.230769
7	5003227	A->G	+	ENSG00000272968	RBAK-RBAKDN	protein_coding	Intergenic	.	.	Alu	0.636364
7	5326517	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.176471
7	5326561	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.636364
7	5326578	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.307692
7	5326584	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.642857
7	5326724	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.454545
7	5329191	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.3
7	5332239	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.454545
7	5339701	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
7	5408089	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
7	5413621	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.3
7	5417418	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.333333
7	5417429	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.5
7	5417436	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.153846
7	5417464	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
7	6104031	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
7	6104074	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	6104179	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	6104180	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	6108128	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.2
7	6112262	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.25
7	6112263	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.166667
7	6112407	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.4
7	6379043	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.181818
7	6381492	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.307692
7	6381527	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.166667
7	6382677	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.142857
7	6411532	A->G	-	ENSG00000164535	DAGLB	protein_coding	Intergenic	.	.	Alu	0.4
7	6411599	A->G	-	ENSG00000164535	DAGLB	protein_coding	Intergenic	.	.	Alu	0.307692
7	6411615	A->G	-	ENSG00000164535	DAGLB	protein_coding	Intergenic	.	.	Alu	0.307692
7	6442809	A->G	-	ENSG00000164535	DAGLB	protein_coding	Intergenic	.	.	Alu	0.166667
7	6474771	A->G	-	ENSG00000136240	KDELR2	protein_coding	Intergenic	.	.	Alu	0.181818
7	6481637	A->G	-	ENSG00000136240	KDELR2	protein_coding	Intergenic	.	.	Alu	0.125
7	6481706	A->G	-	ENSG00000136240	KDELR2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	6482923	A->G	-	ENSG00000136240	KDELR2	protein_coding	Intergenic	.	.	Alu	0.214286
7	6751712	A->G	+	ENSG00000187953	PMS2CL	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
8	6872154	A->G	-	ENSG00000164825	DEFB1	protein_coding	Intergenic	.	.	Alu	0.571429
8	6872158	A->G	-	ENSG00000164825	DEFB1	protein_coding	Intergenic	.	.	Alu	0.642857
9	2187443	A->G	+	ENSG00000080503	SMARCA2	protein_coding	Intergenic	.	.	Alu	0.166667
9	2760534	A->G	-	ENSG00000080608	PUM3	protein_coding	Intergenic	.	.	Alu	0.3
9	2766287	A->G	-	ENSG00000080608	PUM3	protein_coding	Intergenic	.	.	Alu	0.230769
9	2766316	A->G	-	ENSG00000080608	PUM3	protein_coding	Intergenic	.	.	Alu	0.454545
9	2767813	A->G	-	ENSG00000080608	PUM3	protein_coding	Intergenic	.	.	Alu	0.4
9	2767816	A->G	-	ENSG00000080608	PUM3	protein_coding	Intergenic	.	.	Alu	0.6
9	2769907	A->G	-	ENSG00000080608	PUM3	protein_coding	Intergenic	.	.	Alu	0.181818
9	2769946	A->G	-	ENSG00000080608	PUM3	protein_coding	Intergenic	.	.	Alu	0.153846
9	2769947	A->G	-	ENSG00000080608	PUM3	protein_coding	Intergenic	.	.	Alu	0.230769
9	3502062	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.454545
9	3502175	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	3502196	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.2
9	3519994	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.153846
9	3520048	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.125
9	3520058	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.111111
9	3520060	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.111111
9	3520064	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.133333
9	3520744	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.238095
9	3520752	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.15
9	3520754	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.3
9	3520813	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.181818
9	3520881	A->G	-	ENSG00000080298	RFX3	protein_coding	Intergenic	.	.	Alu	0.181818
9	4736928	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.230769
9	4737504	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.166667
9	4737552	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.125
9	4737592	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.111111
9	4737636	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.117647
9	4738326	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.153846
9	4738936	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.230769
9	4739767	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.210526
9	4739793	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.153846
9	4739845	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.117647
9	6419797	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.2
9	6446724	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.307692
9	6477047	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.153846
9	6477068	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.181818
10	1059641	A->G	+	ENSG00000047056	WDR37	protein_coding	Intergenic	.	.	Alu	0.181818
10	1059914	A->G	+	ENSG00000047056	WDR37	protein_coding	Intergenic	.	.	Alu	0.333333
10	1059948	A->G	+	ENSG00000047056	WDR37	protein_coding	Intergenic	.	.	Alu	0.125
10	1059949	A->G	+	ENSG00000047056	WDR37	protein_coding	Intergenic	.	.	Alu	0.125
10	6213265	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.111111
11	2980388	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.2
11	2986199	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.2
11	2986210	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.181818
11	2986211	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.181818
11	3698430	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.3
11	3698431	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.4
11	3722704	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.470588
11	3722731	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.266667
11	3722805	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.333333
11	3750363	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3756898	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.538462
11	3756929	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.363636
11	3770418	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3790981	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3791060	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.25
11	3791063	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.105263
11	3791089	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.111111
11	3791282	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.333333
11	3791307	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.105263
11	3791350	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.210526
11	3792363	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.08
11	3792430	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.111111
11	3793011	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.333333
11	3793025	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.125
11	3793028	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1875
11	3793416	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0909091
11	3793426	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0833333
11	3793886	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.111111
11	3793906	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.133333
11	3794739	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.12
11	3794752	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0689655
11	3794833	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.103448
11	3794860	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0909091
11	3794864	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3795222	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.277778
11	3795415	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0869565
11	9172964	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.307692
11	9172967	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9240615	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9240658	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.25
11	9248018	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0769231
11	9248587	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0714286
11	9252480	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.130435
11	9252481	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0869565
11	9252565	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.08
11	9253026	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0689655
11	9253079	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.111111
11	9253125	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0540541
11	9253139	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.225806
11	9253144	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0740741
11	9257150	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9259784	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0740741
11	9259785	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0740741
11	9260920	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.1
11	9260973	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.105263
11	9291566	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.5
11	9291872	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.285714
11	9293970	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.3
11	9581915	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.25
11	9582628	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.277778
11	9582636	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.421053
11	9582667	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.105263
11	9582733	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.2
11	9582742	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.142857
11	9582748	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.133333
11	9582751	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.333333
11	9582767	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.153846
11	9582777	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.111111
11	9582826	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.333333
11	9583083	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.117647
11	9584329	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.3
11	9584335	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.272727
11	9584411	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.166667
11	9584893	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.307692
11	9584932	A->G	+	ENSG00000166483	WEE1	protein_coding	Intergenic	.	.	Alu	0.272727
11	9809726	A->G	+	ENSG00000246273	SBF2-AS1	antisense	Intergenic	.	.	Alu	0.181818
11	9810045	A->G	+	ENSG00000246273	SBF2-AS1	antisense	Intergenic	.	.	Alu	0.615385
11	9810097	A->G	+	ENSG00000246273	SBF2-AS1	antisense	Intergenic	.	.	Alu	0.181818
11	9810100	A->G	+	ENSG00000246273	SBF2-AS1	antisense	Intergenic	.	.	Alu	0.181818
11	9810105	A->G	+	ENSG00000246273	SBF2-AS1	antisense	Intergenic	.	.	Alu	0.272727
12	1692930	A->G	+	ENSG00000006831	ADIPOR2	protein_coding	Intergenic	.	.	Alu	0.2
12	3612778	A->G	-	ENSG00000130038	CRACR2A	protein_coding	Intergenic	.	.	Alu	0.105263
12	6586533	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.5
12	6586638	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.125
12	7098869	A->G	-	ENSG00000139178	C1RL	protein_coding	Intergenic	.	.	Alu	0.55
12	7099489	A->G	-	ENSG00000139178	C1RL	protein_coding	Intergenic	.	.	Alu	0.588235
12	7923446	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.142857
12	7928022	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.142857
12	7928766	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	1
12	7935631	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	1
12	9649312	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intergenic	.	.	Alu	0.416667
12	9658632	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.111111
12	9658649	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.277778
12	9658712	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.315789
12	9658727	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.111111
12	9658732	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.125
12	9658740	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.285714
12	9659578	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.538462
12	9659581	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.5
16	1936211	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
16	1936237	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	1936246	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
16	1936267	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
16	1936337	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	1936340	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	1936439	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
16	1936453	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
16	1936454	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
16	1936634	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	1936697	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	1937630	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
16	1937646	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
16	1937650	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	1937691	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
16	1937692	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
16	1937722	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	1937727	A->G	-	.	.	.	Intergenic	.	.	Alu	0.647059
16	1937772	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
16	1937773	A->G	-	.	.	.	Intergenic	.	.	Alu	0.625
16	1937987	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
16	1937988	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
16	1938050	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
16	1938052	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
16	1938074	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
16	1938084	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
16	1938094	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
16	1938098	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
16	1938123	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
16	1938130	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	2260334	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.2
16	2261043	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.111111
16	2261089	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.1
16	3460525	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.166667
16	4843292	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4843293	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.2
16	4843319	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.142857
16	4853614	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4853638	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.142857
16	8952150	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.2
16	9097312	A->G	+	ENSG00000182831	C16orf72	protein_coding	Intergenic	.	.	Alu	0.121212
16	9097329	A->G	+	ENSG00000182831	C16orf72	protein_coding	Intergenic	.	.	Alu	0.0526316
16	9097426	A->G	+	ENSG00000182831	C16orf72	protein_coding	Intergenic	.	.	Alu	0.05
16	9097471	A->G	+	ENSG00000182831	C16orf72	protein_coding	Intergenic	.	.	Alu	0.06
17	1063944	A->G	-	ENSG00000159842	ABR	protein_coding	Intergenic	.	.	Alu	0.230769
17	1350227	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.166667
17	1359198	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0952381
17	1360544	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0952381
17	1374232	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.272727
17	1384803	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.230769
17	1384914	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.272727
17	1384915	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.272727
17	1384930	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.2
17	1392662	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.117647
17	2280956	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.4
17	2597480	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.307692
17	2598000	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.105263
17	2598046	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.0909091
17	2600044	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.363636
17	2600049	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.272727
17	2600079	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.153846
17	2600109	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2604177	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.230769
17	2672006	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.6
17	2672010	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.5
17	2672013	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2672039	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.6
17	4358363	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.166667
17	5382848	A->G	+	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.2
17	5382865	A->G	+	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.2
17	5414702	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.5
17	5487377	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.478261
17	7490309	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.153846
17	7490558	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.181818
17	7492448	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.25
17	8172658	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
17	8366926	A->G	-	ENSG00000265749	AC135178.3	antisense	Intergenic	.	.	Alu	0.2
17	8366992	A->G	-	ENSG00000265749	AC135178.3	antisense	Intergenic	.	.	Alu	0.333333
17	8367254	A->G	-	ENSG00000265749	AC135178.3	antisense	Intergenic	.	.	Alu	0.157895
17	8367309	A->G	-	ENSG00000265749	AC135178.3	antisense	Intergenic	.	.	Alu	0.833333
17	8368379	A->G	-	ENSG00000265749	AC135178.3	antisense	Intergenic	.	.	Alu	0.318182
17	8368380	A->G	-	ENSG00000265749	AC135178.3	antisense	Intergenic	.	.	Alu	0.181818
17	8368391	A->G	-	ENSG00000265749	AC135178.3	antisense	Intergenic	.	.	Alu	0.565217
18	2660148	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.111111
18	2660568	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.153846
18	2660683	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.133333
18	2670736	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.166667
18	2670742	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.153846
18	2671156	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2678917	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2708416	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.5
18	2708420	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.454545
18	2708451	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.142857
18	2708514	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.166667
18	2708515	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.25
18	2708519	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.230769
18	2717436	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.357143
18	2717437	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.285714
18	2717440	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.181818
18	2850202	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0465116
18	2850208	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0681818
18	2850214	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0465116
18	2850518	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.133333
18	2852618	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0769231
18	2852619	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.148148
18	2854535	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0952381
18	2905703	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.181818
18	9115655	A->G	+	ENSG00000263847	AP005899.1	antisense	Intergenic	.	.	Alu	0.153846
18	9142727	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.2
18	9143600	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.133333
18	9143672	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.266667
18	9153081	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.181818
18	9369479	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.4
18	9369760	A->G	+	ENSG00000128791	TWSG1	protein_coding	Intergenic	.	.	Alu	0.2
18	9607212	A->G	-	ENSG00000154845	PPP4R1	protein_coding	Intergenic	.	.	Alu	0.133333
18	9607239	A->G	-	ENSG00000154845	PPP4R1	protein_coding	Intergenic	.	.	Alu	0.111111
19	1459302	A->G	-	ENSG00000115266	APC2	protein_coding	Intergenic	.	.	Alu	0.235294
19	1459303	A->G	-	ENSG00000115266	APC2	protein_coding	Intergenic	.	.	Alu	0.352941
19	1586763	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.153846
19	1586764	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.142857
19	1586769	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.4
19	1586772	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.2
19	1586773	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.133333
19	1586791	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.230769
19	1589553	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.153846
19	1590377	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.142857
19	1590378	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.0952381
19	1590387	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.166667
19	1590478	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.230769
19	1590490	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.25
19	1590496	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.461538
19	1590506	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.384615
19	1590603	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.15
19	2069753	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	2077142	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.125
19	2077144	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.08
19	2077234	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.1875
19	2077251	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.2
19	2077388	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.142857
19	2077396	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.125
19	2078063	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.2
19	2293246	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.136364
19	2293271	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	1
19	2293409	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2293995	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.097561
19	2295585	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.25
19	3138078	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.0833333
19	3139046	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.142857
19	3139085	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.181818
19	3139372	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.105263
19	3139405	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.2
19	3161084	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.266667
19	3161144	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.105263
19	3161222	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.111111
19	3161818	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.181818
19	3161823	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.153846
19	3164635	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
19	3164887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	3540287	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.2
19	3542547	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.4
19	3542562	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.181818
19	3542598	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.3
19	3542679	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.181818
19	3542729	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.3
19	3542755	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.181818
19	4379262	A->G	-	ENSG00000141985	SH3GL1	protein_coding	Intergenic	.	.	Alu	0.2
19	4395216	A->G	-	ENSG00000141985	SH3GL1	protein_coding	Intergenic	.	.	Alu	0.105263
19	4396360	A->G	-	ENSG00000141985	SH3GL1	protein_coding	Intergenic	.	.	Alu	0.125
19	4396363	A->G	-	ENSG00000141985	SH3GL1	protein_coding	Intergenic	.	.	Alu	0.133333
19	4421519	A->G	+	ENSG00000167670	CHAF1A	protein_coding	Intergenic	.	.	Alu	0.153846
19	4421562	A->G	+	ENSG00000167670	CHAF1A	protein_coding	Intergenic	.	.	Alu	0.4
19	4915626	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.307692
19	4915633	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.333333
19	4915658	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.272727
19	5596006	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.153846
19	5596008	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.153846
19	5596019	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.545455
19	5596083	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.6
19	5596135	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.2
19	5596615	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.285714
19	5596622	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.153846
19	5615112	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.153846
19	5629001	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.363636
19	5637608	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.3
19	5637616	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.3
19	5710914	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.166667
19	6016456	A->G	-	ENSG00000266983	AC011444.1	antisense	Intergenic	.	.	Alu	0.272727
19	6073117	A->G	-	ENSG00000267262	AC011444.2	antisense	Intergenic	.	.	Alu	0.181818
19	6081748	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.153846
19	6081773	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.166667
19	6081790	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.153846
19	6081828	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.2
19	6081829	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.133333
19	6085900	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.181818
19	6085919	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.181818
19	6086007	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.181818
19	6102904	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	6104679	A->G	-	ENSG00000087903	RFX2	protein_coding	Intergenic	.	.	Alu	0.166667
19	6386202	A->G	-	ENSG00000125651	GTF2F1	protein_coding	Intergenic	.	.	Alu	0.272727
19	8473150	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.166667
19	8479584	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.166667
20	1489914	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.3125
20	2877539	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.181818
20	2881858	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.25
20	2882493	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.25
20	3157069	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.142857
20	3898365	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.272727
20	3960621	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.307692
20	3961145	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3961156	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.272727
20	3961157	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.636364
20	3961158	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3961185	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.117647
20	3961208	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.307692
20	3961228	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3961319	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3961325	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3962132	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.230769
20	3962135	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.5
20	3962150	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3962170	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.5
20	3962779	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.142857
20	3962787	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.333333
20	3962807	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3962865	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.571429
20	3962894	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.416667
20	3962902	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.357143
20	3962938	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.636364
20	3962965	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3964736	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3964737	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.833333
20	3964765	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.285714
20	3964769	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.142857
20	3964791	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.25
20	3964793	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.375
20	3985772	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3988175	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.166667
20	3988267	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.384615
20	3991498	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.4
20	3996962	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.166667
20	3997102	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.4
20	3997143	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.285714
20	3997487	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.25
20	3997489	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.230769
20	3997541	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3997578	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.545455
20	3997619	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.230769
20	3997625	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3997668	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.3
20	3997692	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.4
20	3997693	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3999042	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.117647
20	3999718	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	4009994	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.142857
20	4012168	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.15
20	4012247	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.117647
20	4012305	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	4012370	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	4013620	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	5129840	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5129841	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.173913
20	5129853	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.0952381
20	5130034	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.0731707
20	5130112	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.238095
20	5130139	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.125
20	5130715	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.266667
20	5130880	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.157895
20	5133597	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.333333
20	5133602	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.166667
20	5134590	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.214286
20	5564759	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.111111
20	5564779	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.15
20	5573178	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.136364
20	5573179	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	5573222	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.285714
20	5573681	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	5573686	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.190476
20	5573693	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	5587492	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5587645	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.230769
20	5589512	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.193548
20	5589536	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	6000051	A->G	+	ENSG00000278719	MCM8-AS1	antisense	Intergenic	.	.	Alu	0.636364
20	6000122	A->G	+	ENSG00000278719	MCM8-AS1	antisense	Intergenic	.	.	Alu	0.5
20	8140978	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.181818
20	8140981	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.181818
21	8218777	A->G	-	ENSG00000278996	FP671120.1	lincRNA	Intergenic	.	.	Alu	1
21	8397658	A->G	+	ENSG00000280441	FP236383.1	lincRNA	Intergenic	.	.	Alu	0.135135
21	8446047	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	10400927	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.117647
1	10401040	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.1875
1	10401045	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.117647
1	10401058	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.111111
1	10401144	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.0909091
1	10405620	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.181818
1	10405630	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.176471
1	10405633	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.222222
1	10405671	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.272727
1	10405674	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.136364
1	10405709	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.352941
1	10405716	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.0952381
1	10405933	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.107143
1	10405934	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.148148
1	10405940	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.1
1	10405999	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.185185
1	10406015	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.227273
1	10406019	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.0833333
1	10406020	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.0769231
1	10406060	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.631579
1	10406113	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.227273
1	10406114	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.0869565
1	10406294	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.2
1	10406308	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.125
1	10409866	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.157895
1	10410173	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.333333
1	10410250	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.0714286
1	10410295	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.0625
1	10410322	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.347826
1	10410392	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.0606061
1	11020860	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.08
1	11020869	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.157895
1	11021734	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.176471
1	11021885	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.0769231
1	11028102	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.142857
1	11029057	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.181818
1	11298393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	11298406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	13767366	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.210526
1	13767371	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.1
1	13767386	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.166667
1	13767396	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.117647
1	13767418	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.133333
1	13767748	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.352941
1	13767765	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.333333
1	13767854	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.368421
1	13767868	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.421053
1	13767891	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.1
1	13767901	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.318182
1	13767931	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.2
1	13768480	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.25
1	13768612	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	15691170	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.142857
1	15691187	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	15691211	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.111111
1	15691217	A->G	+	ENSG00000116786	PLEKHM2	protein_coding	Intergenic	.	.	Alu	0.166667
1	15881142	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.3
1	15881160	A->G	+	ENSG00000065526	SPEN	protein_coding	Intergenic	.	.	Alu	0.2
1	16373459	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.3
1	16373743	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.230769
1	16373745	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.142857
1	16373833	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.133333
1	16373838	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.176471
1	17414382	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.111111
1	17414724	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.285714
1	17414729	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	17414737	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	17414771	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	17414799	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0666667
1	17414889	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.185185
1	17414893	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.148148
1	17415548	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.307692
1	17415562	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.153846
1	17430620	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.2
1	17430623	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.166667
1	17430629	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.181818
1	17430839	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.272727
1	17430840	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.363636
1	17430917	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.263158
1	17430921	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.333333
1	19215188	A->G	-	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.166667
1	19215243	A->G	-	ENSG00000230424	AL035413.1	antisense	Intergenic	.	.	Alu	0.214286
1	19293935	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
1	19599266	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.1
1	19605789	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.285714
1	20775424	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	20784999	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21162336	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21164642	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.272727
1	21164764	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21164769	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.363636
1	21168649	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.333333
1	21168698	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21168699	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21169062	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21169194	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.125
1	21173272	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.3
1	21173279	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.214286
1	21173282	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.153846
1	21173334	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.3
1	21775408	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.272727
1	22061796	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
1	22065836	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.181818
1	22065859	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.166667
1	22066319	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.166667
1	22071251	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.133333
1	22074283	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.166667
1	22082936	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.107143
1	22082944	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0769231
1	22082979	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.08
1	22083019	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.133333
1	22083416	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0555556
1	22083447	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.1
1	23025434	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	23139730	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	23153861	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.1875
1	23156163	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.125
1	23325963	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.133333
1	23325976	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.125
1	23326015	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.166667
1	23329903	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.25
1	23330452	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.1875
1	23334051	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.266667
1	23334062	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.153846
1	23337580	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23337581	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23968743	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	1
1	23972829	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	1
1	23973422	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.0769231
1	23973607	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.153846
1	23974359	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.647059
1	23974663	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.137931
1	23974707	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.114286
1	23974767	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.0625
1	23974772	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.142857
1	23974819	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.230769
1	24663712	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.214286
1	24677475	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	24750555	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.2
1	24764531	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.3
1	24774754	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.142857
1	25229693	A->G	-	ENSG00000117614	SYF2	protein_coding	Intergenic	.	.	Alu	0.166667
1	26698009	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.25
1	26704679	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.230769
1	26704706	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26704708	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26704709	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	26704756	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.6
1	26705203	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.214286
1	26705231	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.210526
1	26705237	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.157895
1	26705238	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.368421
1	26711850	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	26711996	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.272727
1	26714514	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26714558	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26721243	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.4
1	27874255	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.5
1	28261978	A->G	+	ENSG00000130766	SESN2	protein_coding	Intergenic	.	.	Alu	0.25
1	28541283	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	28747625	A->G	+	ENSG00000198492	YTHDF2	protein_coding	Intergenic	.	.	Alu	0.272727
1	29175305	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.142857
1	30743974	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.15
1	30743975	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.210526
1	30743982	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.214286
1	30999231	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.461538
1	30999251	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.363636
1	30999459	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.7
1	30999507	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	30999524	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.272727
1	31050006	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
1	31050007	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
1	31050008	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31050302	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.266667
1	31050322	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.125
1	31053575	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31054242	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31054243	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31060378	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.181818
1	31060425	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.117647
1	31060459	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.117647
1	31919876	A->G	-	ENSG00000269967	AL136115.2	lincRNA	Intergenic	.	.	Alu	0.111111
1	31919924	A->G	-	ENSG00000269967	AL136115.2	lincRNA	Intergenic	.	.	Alu	0.176471
1	31920765	A->G	-	ENSG00000269967	AL136115.2	lincRNA	Intergenic	.	.	Alu	0.2
1	31933227	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intergenic	.	.	Alu	0.153846
1	31935946	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.153846
1	31936356	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.142857
1	32019901	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	32019955	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.222222
1	32021758	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.4
1	32225767	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.2
1	32227558	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.2
1	32230347	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.6
1	32379693	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.133333
1	32379729	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.2
1	32380560	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.214286
1	32380563	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.153846
1	32380632	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.3
1	32654144	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.153846
1	32654163	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.235294
1	32657208	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.2
1	35097762	A->G	+	ENSG00000197056	ZMYM1	protein_coding	Intergenic	.	.	Alu	0.25
1	35117561	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	35117602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
1	35117854	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
1	35117861	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
1	35117927	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	35275319	A->G	+	ENSG00000146463	ZMYM4	protein_coding	Intergenic	.	.	Alu	0.3
1	35736000	A->G	-	ENSG00000092853	CLSPN	protein_coding	Intergenic	.	.	Alu	0.0487805
1	35736038	A->G	-	ENSG00000092853	CLSPN	protein_coding	Intergenic	.	.	Alu	0.0625
1	35736055	A->G	-	ENSG00000092853	CLSPN	protein_coding	Intergenic	.	.	Alu	0.0588235
1	35736069	A->G	-	ENSG00000092853	CLSPN	protein_coding	Intergenic	.	.	Alu	0.0625
1	35736070	A->G	-	ENSG00000092853	CLSPN	protein_coding	Intergenic	.	.	Alu	0.0625
1	36176974	A->G	+	ENSG00000116871	MAP7D1	protein_coding	Intergenic	.	.	Alu	0.3
1	36228902	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.285714
1	36229183	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	36237721	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.4
1	36239393	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.333333
1	36239406	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.25
1	36239428	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.307692
1	36239433	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.2
1	36239447	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.2
1	36250982	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	36478588	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.272727
1	37491279	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
1	37498633	A->G	-	ENSG00000163875	MEAF6	protein_coding	Intergenic	.	.	Alu	0.454545
1	37498704	A->G	-	ENSG00000163875	MEAF6	protein_coding	Intergenic	.	.	Alu	0.333333
1	37498710	A->G	-	ENSG00000163875	MEAF6	protein_coding	Intergenic	.	.	Alu	0.333333
1	37498994	A->G	-	ENSG00000163875	MEAF6	protein_coding	Intergenic	.	.	Alu	0.833333
1	37499003	A->G	-	ENSG00000163875	MEAF6	protein_coding	Intergenic	.	.	Alu	0.636364
1	37547703	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	37802286	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
1	38993528	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	38994531	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	38994537	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.1
1	38994606	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	38994789	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.117647
1	38995857	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.2
1	38995919	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.111111
1	38995966	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.142857
1	38996199	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
1	38996234	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.266667
1	38996260	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.142857
1	38996736	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.24
1	38996781	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.0571429
1	38996791	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.0810811
1	39000881	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
1	40174169	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.142857
1	40377100	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0625
1	40377171	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0363636
1	40377210	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0408163
1	40378194	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.1875
1	40378241	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.147059
1	40378502	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0606061
1	40378527	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.09375
1	40378546	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.05
1	40378564	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	40379224	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0307692
1	40379246	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0322581
1	40392817	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.6
1	40398724	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.3125
1	40402550	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.545455
1	40402553	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	40402579	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.8
1	42690091	A->G	+	ENSG00000065978	YBX1	protein_coding	Intergenic	.	.	Alu	0.08
1	42690186	A->G	+	ENSG00000065978	YBX1	protein_coding	Intergenic	.	.	Alu	0.153846
1	42702988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	43662556	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.142857
1	43662557	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.5
1	44432327	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44432370	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44432371	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44432544	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0833333
1	44432547	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44432548	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44432654	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.363636
1	44433007	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.52381
1	44433029	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.133333
1	44433030	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44433085	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.470588
1	44433113	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.1
1	44433130	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3125
1	44433204	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.285714
1	44433715	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.384615
1	44433716	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.214286
1	44433761	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.333333
1	44433762	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.125
1	44433768	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.111111
1	44433786	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44433816	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44433825	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.333333
1	44433882	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.357143
1	44433890	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44433903	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44434521	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44438221	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.105263
1	44438337	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.272727
1	44442272	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.153846
1	44442378	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.25
1	44442594	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.466667
1	44442608	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.214286
1	44442676	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44444079	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.230769
1	44444510	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.1
1	44444515	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.0869565
1	44449623	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44451679	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44451721	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.133333
1	44451738	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44463247	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44468837	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.230769
1	44474628	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.214286
1	44474629	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.142857
1	44488049	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44489008	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44521008	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44521026	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44521029	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.272727
1	44521035	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.272727
1	44528375	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.454545
1	44630140	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.7
1	45587906	A->G	+	ENSG00000132780	NASP	protein_coding	Intergenic	.	.	Alu	0.166667
1	45589148	A->G	+	ENSG00000132780	NASP	protein_coding	Intergenic	.	.	Alu	0.214286
1	45589176	A->G	+	ENSG00000132780	NASP	protein_coding	Intergenic	.	.	Alu	0.388889
1	45589195	A->G	+	ENSG00000132780	NASP	protein_coding	Intergenic	.	.	Alu	0.333333
1	45589207	A->G	+	ENSG00000132780	NASP	protein_coding	Intergenic	.	.	Alu	0.461538
1	45589314	A->G	+	ENSG00000132780	NASP	protein_coding	Intergenic	.	.	Alu	0.333333
1	45589354	A->G	+	ENSG00000132780	NASP	protein_coding	Intergenic	.	.	Alu	0.133333
1	45589376	A->G	+	ENSG00000132780	NASP	protein_coding	Intergenic	.	.	Alu	0.3
1	45657474	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.277778
1	45657766	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45659417	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
1	45659477	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.3
1	45659700	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	46356171	A->G	+	ENSG00000117481	NSUN4	protein_coding	Intergenic	.	.	Alu	0.2
1	46365396	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	46365469	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
1	50954789	A->G	-	ENSG00000185104	FAF1	protein_coding	Intergenic	.	.	Alu	0.3
1	51242677	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.214286
1	51245414	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.3
1	51245415	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51245581	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.230769
1	51245711	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51246454	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.166667
1	51246472	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.153846
1	51247222	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.166667
1	51624015	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.178571
1	51624035	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.166667
1	51624097	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.105263
1	51624100	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.333333
1	51624427	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.230769
1	51624428	A->G	+	ENSG00000117859	OSBPL9	protein_coding	Intergenic	.	.	Alu	0.153846
1	52065977	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.285714
1	52066225	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.142857
1	52066242	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.266667
1	52076457	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.166667
1	52407801	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.0869565
1	52409435	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.166667
1	54035710	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.2
1	61717639	A->G	-	ENSG00000162604	TM2D1	protein_coding	Intergenic	.	.	Alu	0.166667
1	61722234	A->G	-	ENSG00000162604	TM2D1	protein_coding	Intergenic	.	.	Alu	0.166667
1	62449146	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	62449158	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	62453570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	62453846	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
1	66944909	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.08
1	66952673	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	67414008	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.2
1	67414013	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.2
1	67418591	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	67418593	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.230769
1	70210322	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.133333
1	70210338	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.214286
1	70210359	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.368421
1	70210401	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.3
1	70210409	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.1
1	70210488	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.142857
1	70210510	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.428571
1	70210529	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.153846
1	70210562	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.2
1	70212357	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.181818
1	72092680	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.125
1	72092721	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.230769
1	72157170	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.125
1	72161771	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.7
1	72161775	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.333333
1	72161817	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.666667
1	72161823	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.5
1	72162341	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.230769
1	72162365	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.142857
1	72162379	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.142857
1	72162399	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.142857
1	72162400	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.142857
1	72162445	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.153846
1	72168672	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.375
1	72168673	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.125
1	72168788	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.4
1	72168817	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.142857
1	72168848	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.9375
1	72168853	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.25
1	72173224	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.333333
1	72173267	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.533333
1	72236224	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.3
1	72252182	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.117647
1	72252201	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.117647
1	72252204	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.176471
1	72252317	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.214286
1	72254458	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.230769
1	72254580	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.25
1	72254590	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.153846
1	72254602	A->G	-	ENSG00000172260	NEGR1	protein_coding	Intergenic	.	.	Alu	0.142857
1	77789432	A->G	+	ENSG00000180488	MIGA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	77789478	A->G	+	ENSG00000180488	MIGA1	protein_coding	Intergenic	.	.	Alu	0.4
1	77950221	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.178571
1	77950264	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.222222
1	77950411	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	77953408	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.210526
1	77953429	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	77953444	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	77971910	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0625
1	77971919	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.138889
1	77973308	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	77973357	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	77973384	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	77974477	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	77976766	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.157895
1	77977404	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	77977439	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	77977440	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	77977443	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	77977524	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.137931
1	84150089	A->G	+	ENSG00000142875	PRKACB	protein_coding	Intergenic	.	.	Alu	0.2
1	86379069	A->G	-	ENSG00000122417	ODF2L	protein_coding	Intergenic	.	.	Alu	0.25
1	88884216	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	88885690	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.117647
1	88887083	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.133333
1	89643148	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.363636
1	89869154	A->G	+	ENSG00000271949	AC093423.3	protein_coding	Intergenic	.	.	Alu	0.692308
1	89869168	A->G	+	ENSG00000271949	AC093423.3	protein_coding	Intergenic	.	.	Alu	0.363636
1	89869176	A->G	+	ENSG00000271949	AC093423.3	protein_coding	Intergenic	.	.	Alu	0.166667
1	89997473	A->G	+	ENSG00000162664	ZNF326	protein_coding	Intergenic	.	.	Alu	0.3
1	89997474	A->G	+	ENSG00000162664	ZNF326	protein_coding	Intergenic	.	.	Alu	0.3
1	90971516	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.153846
1	90971517	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.307692
1	90972037	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.384615
1	90972038	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.153846
1	90972075	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.181818
1	92479054	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.357143
1	92479060	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.357143
1	92479061	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.571429
1	92839280	A->G	+	ENSG00000122406	RPL5	protein_coding	Intergenic	.	.	Alu	0.117647
1	93155734	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.0952381
1	93155764	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.0952381
1	93163441	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.363636
1	93163442	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.166667
1	93163485	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.133333
1	93163615	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.153846
1	93176599	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.181818
1	93176642	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.125
1	93176685	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.3125
1	93176698	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.166667
1	93177415	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.133333
1	93177494	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.272727
1	93181732	A->G	+	ENSG00000122483	CCDC18	protein_coding	Intergenic	.	.	Alu	0.153846
1	93371834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
1	96726857	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	96745369	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.4
1	96793509	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.272727
1	96793511	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.3
2	10308931	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.166667
2	10308960	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.181818
2	10320394	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.272727
2	10321233	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.272727
2	10568348	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
2	20038757	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.1
2	20039924	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.142857
2	20039946	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.3
2	20266321	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.5
2	20266331	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20266350	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20266383	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20266398	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.153846
2	20266438	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20266439	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20267234	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.428571
2	20267258	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20271434	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.230769
2	20271478	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20271979	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.4
2	20272047	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.529412
2	20272059	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.125
2	20272076	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.176471
2	20272083	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.4
2	20272149	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20292759	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.9
2	20292766	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.727273
2	20292768	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20292867	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.5
2	20335062	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20335068	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.230769
2	20335072	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20335091	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.1875
2	20335092	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.125
2	20335133	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20343680	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20344256	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.176471
2	20344281	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.105263
2	20344284	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.277778
2	20344334	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.352941
2	20345809	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.1
2	20345836	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	23943215	A->G	+	ENSG00000173960	UBXN2A	protein_coding	Intergenic	.	.	Alu	0.166667
2	23943216	A->G	+	ENSG00000173960	UBXN2A	protein_coding	Intergenic	.	.	Alu	0.230769
2	24514697	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.454545
2	24514698	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.3
2	27353890	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.3
2	27353891	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.4
2	27353892	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.363636
2	28758150	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.12
2	28759354	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.176471
2	28759355	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28785557	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28785583	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.117647
2	28785715	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	28786193	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0666667
2	28786194	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0666667
2	28789243	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	28789249	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.26087
2	28789257	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28789291	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28789429	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28789464	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.25
2	28789699	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28789834	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28789873	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28790017	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.352941
2	28790025	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28790026	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28790066	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0625
2	28790201	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.108108
2	28790206	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.176471
2	28790213	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.121212
2	28790433	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.210526
2	28790439	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28790440	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.222222
2	28790574	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.08
2	28790592	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28790614	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0833333
2	28919941	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.153846
2	31857817	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	31943117	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	31998126	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	32281341	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.333333
2	32281342	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.25
2	32411057	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32507201	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32509349	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.6
2	32509354	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32509355	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.4
2	32509356	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.7
2	32509496	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.142857
2	32561094	A->G	+	ENSG00000279897	BIRC6-AS2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
2	33113775	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.7
2	33126252	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.272727
2	33126283	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.230769
2	33152265	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.266667
2	33152281	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.210526
2	33152312	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.2
2	33152324	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.75
2	33154881	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.636364
2	33154916	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.235294
2	33155255	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.153846
2	33155263	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.333333
2	33155266	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.769231
2	33155268	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.666667
2	33157932	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.1875
2	33157989	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.25
2	33324802	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.133333
2	33324806	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.133333
2	33324841	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.153846
2	33324843	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.272727
2	33324912	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.4
2	33324943	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.133333
2	33324944	A->G	+	ENSG00000049323	LTBP1	protein_coding	Intergenic	.	.	Alu	0.133333
2	33483589	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intergenic	.	.	Alu	0.1
2	33489635	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intergenic	.	.	Alu	0.3
2	33489677	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intergenic	.	.	Alu	0.357143
2	33489681	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intergenic	.	.	Alu	0.333333
2	33489766	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intergenic	.	.	Alu	0.133333
2	33489771	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intergenic	.	.	Alu	0.142857
2	33489772	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intergenic	.	.	Alu	0.142857
2	33489789	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intergenic	.	.	Alu	0.142857
2	37048411	A->G	-	ENSG00000008869	HEATR5B	protein_coding	Intergenic	.	.	Alu	0.363636
2	38307495	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.2
2	38307496	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.3
2	38307533	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.7
2	38321033	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.2
2	38334598	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.2
2	38334659	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.2
2	38339211	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.2
2	38360383	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.166667
2	38360481	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.25
2	38360483	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.153846
2	38582757	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.2
2	38582796	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.272727
2	39116768	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39116769	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.133333
2	42176955	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.133333
2	43967608	A->G	-	ENSG00000138095	LRPPRC	protein_coding	Intergenic	.	.	Alu	0.181818
2	43967631	A->G	-	ENSG00000138095	LRPPRC	protein_coding	Intergenic	.	.	Alu	0.153846
2	43967637	A->G	-	ENSG00000138095	LRPPRC	protein_coding	Intergenic	.	.	Alu	0.2
2	43969955	A->G	-	ENSG00000138095	LRPPRC	protein_coding	Intergenic	.	.	Alu	0.272727
2	43971061	A->G	-	ENSG00000138095	LRPPRC	protein_coding	Intergenic	.	.	Alu	0.142857
2	43988118	A->G	-	ENSG00000138095	LRPPRC	protein_coding	Intergenic	.	.	Alu	0.181818
2	43989019	A->G	-	ENSG00000138095	LRPPRC	protein_coding	Intergenic	.	.	Alu	0.181818
2	44175885	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44175925	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	44176058	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	44177997	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1
2	44178011	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.15
2	44178057	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.133333
2	44195557	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.166667
2	44207688	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.2
2	44210329	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.142857
2	44210344	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44210404	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.272727
2	46946631	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.181818
2	46947461	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.166667
2	46947517	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.1875
2	46953357	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.285714
2	46953417	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.142857
2	46954705	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.2
2	47168573	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.363636
2	47168576	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.181818
2	47168611	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.4
2	47787671	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.153846
2	47818039	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.117647
2	47818053	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0909091
2	47825755	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.153846
2	47830915	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47830955	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47830972	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47866016	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.153846
2	47880056	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0909091
2	47880069	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.130435
2	47880085	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.08
2	47881152	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.133333
2	47887511	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0869565
2	47890574	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.176471
2	47890612	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.111111
2	47890696	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.111111
2	47891031	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.133333
2	47891076	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.111111
2	48368008	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.117647
2	48368023	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.125
2	48368044	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.4
2	48368118	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.133333
2	48368563	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	48368649	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.105263
2	53780662	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.181818
2	53781607	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.272727
2	53781624	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.2
2	53798461	A->G	+	ENSG00000068912	ERLEC1	protein_coding	Intergenic	.	.	Alu	0.3
2	53798507	A->G	+	ENSG00000068912	ERLEC1	protein_coding	Intergenic	.	.	Alu	0.133333
2	53899755	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.230769
2	53899756	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.384615
2	53899761	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.230769
2	53929066	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53929491	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.142857
2	53929518	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3125
2	53956447	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.333333
2	53956448	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.454545
2	53956470	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53956670	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.222222
2	53956678	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.157895
2	53965410	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0833333
2	54566403	A->G	+	ENSG00000115306	SPTBN1	protein_coding	Intergenic	.	.	Alu	0.117647
2	55014623	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	55032334	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.25
2	55034280	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.125
2	55410681	A->G	-	ENSG00000115355	CCDC88A	protein_coding	Intergenic	.	.	Alu	0.2
2	55611802	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.272727
2	60897785	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.363636
2	60897795	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.4
2	60903869	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.285714
2	60934762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	60935535	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	60935891	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	61282214	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.3
2	61338238	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.181818
2	61467049	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61467118	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61509204	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.3
2	61509237	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.307692
2	61509251	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.7
2	61511221	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.176471
2	61511222	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.235294
2	61511940	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61513196	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.3
2	61871169	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.272727
2	61883167	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.0740741
2	61883239	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	61883309	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.428571
2	61885559	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.2
2	61885578	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.181818
2	61886329	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.181818
2	61886330	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.2
2	62209060	A->G	+	ENSG00000170340	B3GNT2	protein_coding	Intergenic	.	.	Alu	0.181818
2	63870165	A->G	+	ENSG00000169764	UGP2	protein_coding	Intergenic	.	.	Alu	0.2
2	64136791	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.031746
2	64136794	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0307692
2	64136795	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.030303
2	64136803	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0333333
2	64136856	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0408163
2	64138195	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.030303
2	64138226	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0410959
2	64139508	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0612245
2	64529683	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.25
2	64529729	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.214286
2	64529769	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.285714
2	64530077	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.142857
2	65091674	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.5
2	65091690	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65091724	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65092030	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65092110	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65092149	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	65092151	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65092213	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.25
2	65094138	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65094139	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65094197	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.217391
2	65094212	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.25
2	65094422	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1875
2	65094428	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.263158
2	65094462	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.12
2	65094508	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.148148
2	65095846	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.214286
2	65096232	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65118660	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65119787	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65122438	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65123623	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0606061
2	65123660	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0740741
2	65123686	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0571429
2	65123702	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0555556
2	65123750	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0645161
2	65230616	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.181818
2	65230799	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.210526
2	65230825	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.142857
2	65424803	A->G	-	ENSG00000198369	SPRED2	protein_coding	Intergenic	.	.	Alu	0.133333
2	66505186	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	66505260	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.133333
2	66505345	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	66559896	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.166667
2	66559900	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.105263
2	66559936	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.25
2	66559958	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	66559980	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.125
2	66559997	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.235294
2	66560410	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.0588235
2	66560451	A->G	+	ENSG00000143995	MEIS1	protein_coding	Intergenic	.	.	Alu	0.2
2	68208788	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.2
2	68212218	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.2
2	69503612	A->G	-	ENSG00000115977	AAK1	protein_coding	Intergenic	.	.	Alu	0.6
2	69511741	A->G	-	ENSG00000115977	AAK1	protein_coding	Intergenic	.	.	Alu	0.307692
2	69597611	A->G	-	ENSG00000229948	B3GALNT1P1	processed_pseudogene	Intergenic	.	.	Alu	0.181818
2	69831019	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.181818
2	69906238	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.25
2	69906249	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.117647
2	69906304	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.2
2	69911141	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.2
2	69928625	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	69928665	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.272727
2	69928666	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	69928974	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	69928994	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	70237186	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
2	70238986	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.181818
2	70244601	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.25
2	70246143	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.3
2	71386948	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.181818
2	71386960	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.272727
2	71387550	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.727273
2	71387577	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.230769
2	73217010	A->G	+	ENSG00000135632	SMYD5	protein_coding	Intergenic	.	.	Alu	0.142857
2	73217069	A->G	+	ENSG00000135632	SMYD5	protein_coding	Intergenic	.	.	Alu	0.2
2	73217117	A->G	+	ENSG00000135632	SMYD5	protein_coding	Intergenic	.	.	Alu	0.181818
2	74161400	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	74161401	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	74161422	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	74162381	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.0909091
2	74162418	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.130435
2	74162419	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.0909091
2	74167342	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.1875
2	74168057	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	75665316	A->G	+	ENSG00000115364	MRPL19	protein_coding	Intergenic	.	.	Alu	0.3
2	75665374	A->G	+	ENSG00000115364	MRPL19	protein_coding	Intergenic	.	.	Alu	0.2
2	75665389	A->G	+	ENSG00000115364	MRPL19	protein_coding	Intergenic	.	.	Alu	0.25
2	75668318	A->G	+	ENSG00000115364	MRPL19	protein_coding	Intergenic	.	.	Alu	0.363636
2	75668337	A->G	+	ENSG00000115364	MRPL19	protein_coding	Intergenic	.	.	Alu	0.5
2	84978948	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.111111
2	84979050	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.105263
2	84979083	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.117647
2	85323013	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.272727
2	85323040	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.5
2	85323043	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.166667
2	85323063	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.4
2	85323230	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.166667
2	85323231	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.181818
2	85323374	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.333333
2	85323466	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.5
2	85323483	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.181818
2	85620404	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.166667
2	85625747	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.4
2	85625790	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.166667
2	85627197	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.166667
2	86446589	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.25
2	86446875	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.15
2	86446945	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.111111
2	86455386	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.214286
2	86562307	A->G	-	ENSG00000228363	AC015971.1	antisense	Intergenic	.	.	Alu	0.1875
2	87050244	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0952381
2	87050279	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
2	88610827	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.133333
2	95825172	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
2	95825198	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
2	95825206	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
2	95825376	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
2	95825413	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
2	95825438	A->G	-	.	.	.	Intergenic	.	.	Alu	0.121212
2	95825441	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
2	95831905	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
2	95831913	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
2	95831914	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
2	96012511	A->G	+	ENSG00000231584	FAHD2CP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
2	96625022	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.2
2	96625128	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	96625188	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.181818
2	97252727	A->G	+	ENSG00000135976	ANKRD36	protein_coding	Intergenic	.	.	Alu	0.272727
2	97252728	A->G	+	ENSG00000135976	ANKRD36	protein_coding	Intergenic	.	.	Alu	0.2
2	97267822	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
2	97267857	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
2	97490374	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	99197740	A->G	+	ENSG00000241962	AC079447.1	protein_coding	Intergenic	.	.	Alu	0.107143
2	99401626	A->G	+	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.2
2	99401627	A->G	+	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.2
2	99401839	A->G	+	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.2
3	10118132	A->G	+	ENSG00000254999	BRK1	protein_coding	Intergenic	.	.	Alu	0.2
3	12577719	A->G	+	ENSG00000075975	MKRN2	protein_coding	Intergenic	.	.	Alu	0.2
3	12598226	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.3
3	15410390	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.153846
3	15410449	A->G	-	ENSG00000206562	METTL6	protein_coding	Intergenic	.	.	Alu	0.166667
3	15690654	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.142857
3	15690662	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.4
3	15690689	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.565217
3	15690782	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0952381
3	15690787	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0869565
3	15690828	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.185185
3	15690834	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.107143
3	15692229	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.181818
3	15692276	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.142857
3	15692333	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.25
3	15692373	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0689655
3	15692417	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.142857
3	15721860	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.111111
3	15721866	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.347826
3	15721910	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.142857
3	15773538	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0508475
3	15773539	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0677966
3	15773542	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.125
3	15773543	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.109091
3	15773613	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0909091
3	15774962	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.0714286
3	18067983	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.0882353
3	18067995	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.137931
3	18072506	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	18072507	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.0909091
3	18072519	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.307692
3	18072572	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.238095
3	18072573	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.181818
3	18072581	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	18072596	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.157895
3	18072616	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.0666667
3	18074608	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.2
3	18074645	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.25
3	18074660	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.125
3	18078589	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.277778
3	18173977	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.166667
3	18183643	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.210526
3	18197297	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.272727
3	18198418	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.454545
3	18250851	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.7
3	18273064	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.117647
3	18273482	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.6
3	18273490	A->G	+	ENSG00000131374	TBC1D5	protein_coding	Intergenic	.	.	Alu	0.153846
3	19954132	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0833333
3	19954636	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.136364
3	19954714	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0869565
3	19954746	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0952381
3	23813688	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.153846
3	23831790	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.1875
3	23831893	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.181818
3	23831967	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.111111
3	23832979	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.214286
3	23838167	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23838168	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.181818
3	23838171	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.363636
3	23921062	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23960460	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.333333
3	27461377	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.181818
3	27461393	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.181818
3	27474547	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.125
3	27474671	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.157895
3	27474988	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.153846
3	27474994	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.25
3	27479197	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.0909091
3	27479198	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.0833333
3	27479286	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.133333
3	27479292	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.1
3	27479352	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.0909091
3	27479357	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.0952381
3	27480331	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.125
3	27480372	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.117647
3	27482672	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.0869565
3	31639395	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	32540569	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.166667
3	32544019	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.7
3	32544020	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.3
3	32544022	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.6
3	32562217	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.181818
3	32562222	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.2
3	33429414	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.266667
3	33429475	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.2
3	33432212	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.272727
3	37173076	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.0689655
3	37173341	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.304348
3	37249479	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	37251785	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.157895
3	37253163	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.285714
3	37253177	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.117647
3	37253222	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.105263
3	37253966	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	38530843	A->G	+	ENSG00000157036	EXOG	protein_coding	Intergenic	.	.	Alu	0.285714
3	38540244	A->G	+	ENSG00000157036	EXOG	protein_coding	Intergenic	.	.	Alu	0.230769
3	38540260	A->G	+	ENSG00000157036	EXOG	protein_coding	Intergenic	.	.	Alu	0.384615
3	38540764	A->G	+	ENSG00000157036	EXOG	protein_coding	Intergenic	.	.	Alu	0.75
3	39058151	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.1875
3	39063681	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.5
3	39063798	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.117647
3	39063827	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.166667
3	39064392	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.133333
3	39064549	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.333333
3	39393205	A->G	+	ENSG00000144659	SLC25A38	protein_coding	Intergenic	.	.	Alu	0.307692
3	39409030	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.111111
3	39409281	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.291667
3	39409382	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.166667
3	39409399	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.153846
3	39409475	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.142857
3	39410042	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.0909091
3	39413081	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	39413401	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	39413402	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	39413403	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
3	39413469	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	39413472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
3	40460662	A->G	+	ENSG00000188846	RPL14	protein_coding	Intergenic	.	.	Alu	0.181818
3	41210267	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0441176
3	41210333	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.102041
3	41210360	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.225
3	41210374	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.307692
3	41210375	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.102564
3	41210821	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.222222
3	41210875	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0444444
3	41210902	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.290323
3	41210929	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.285714
3	41210982	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.107143
3	42015875	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	42015987	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.1
3	42016253	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.142857
3	42016291	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	42016298	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	42016322	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	42016379	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.111111
3	42016385	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.111111
3	42016425	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.153846
3	42021677	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	42608930	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.133333
3	42783452	A->G	-	ENSG00000280571	AC099329.3	protein_coding	Intergenic	.	.	Alu	0.153846
3	44496233	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
3	44496239	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
3	44496281	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
3	44496295	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
3	44497469	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
3	44759728	A->G	-	ENSG00000163807	KIAA1143	protein_coding	Intergenic	.	.	Alu	0.153846
3	44759795	A->G	-	ENSG00000163807	KIAA1143	protein_coding	Intergenic	.	.	Alu	0.25
3	44759864	A->G	-	ENSG00000163807	KIAA1143	protein_coding	Intergenic	.	.	Alu	0.2
3	44923638	A->G	-	ENSG00000163812	ZDHHC3	protein_coding	Intergenic	.	.	Alu	0.166667
3	44923639	A->G	-	ENSG00000163812	ZDHHC3	protein_coding	Intergenic	.	.	Alu	0.5
3	45615577	A->G	+	ENSG00000144791	LIMD1	protein_coding	Intergenic	.	.	Alu	0.2
3	46916918	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
3	46972683	A->G	-	ENSG00000160799	CCDC12	protein_coding	Intergenic	.	.	Alu	0.153846
3	47090136	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
3	47142273	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
3	47142297	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.166667
3	47143211	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.117647
3	47143260	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.142857
3	47144742	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.2
3	47145467	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.153846
3	47145468	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.285714
3	47145478	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.266667
3	47145479	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.266667
3	47145753	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
3	47145757	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
3	47145771	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.3
3	47145772	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.2
3	47147428	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.153846
3	47147451	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.142857
3	47147487	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.307692
3	47280533	A->G	-	ENSG00000088727	KIF9	protein_coding	Intergenic	.	.	Alu	0.181818
3	47280540	A->G	-	ENSG00000088727	KIF9	protein_coding	Intergenic	.	.	Alu	0.181818
3	47725668	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.363636
3	47776384	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.153846
3	47778325	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.105263
3	47778344	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.25
3	47778401	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.125
3	47778864	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.2
3	47778931	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.1
3	47840126	A->G	+	ENSG00000132153	DHX30	protein_coding	Intergenic	.	.	Alu	0.2
3	48070617	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.272727
3	48074619	A->G	-	ENSG00000047849	MAP4	protein_coding	Intergenic	.	.	Alu	0.25
3	48691624	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
3	48691653	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.352941
3	48691667	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.105263
3	48691668	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
3	48691684	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.105263
3	48691715	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.115385
3	48691716	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.5
3	48691757	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.136364
3	48692011	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.333333
3	48704589	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.133333
3	48704672	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.166667
3	48706334	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
3	48706590	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.136364
3	48706599	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0740741
3	48706648	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0833333
3	48706683	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.103448
3	48706696	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.08
3	48706757	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	48706778	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.136364
3	48708890	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0952381
3	48709062	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.15
3	48710215	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	48710268	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.133333
3	48710274	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.368421
3	48710370	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.117647
3	48710386	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.2
3	48710392	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.157895
3	48711041	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	48711183	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.153846
3	48712772	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0689655
3	48714611	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	48923640	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.466667
3	48923651	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.1875
3	48923721	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.142857
3	48923924	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
3	48924032	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.105263
3	49023522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
3	49074010	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.214286
3	49087140	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.3
3	49322616	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49373081	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.230769
3	49373087	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.153846
3	49373127	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.363636
3	49388222	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.181818
3	49408118	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.352941
3	49782695	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.545455
3	49783650	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.117647
3	49784523	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.272727
3	50093089	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.3
3	50096429	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50096809	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50098627	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.111111
3	50098649	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.227273
3	50098777	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.235294
3	50098789	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.105263
3	50098991	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50332552	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	50332557	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.357143
3	50332585	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.266667
3	50332595	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.25
3	50332692	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.181818
3	50332740	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.125
3	50332778	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.117647
3	50332838	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.111111
3	50332878	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.153846
3	50332982	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.166667
3	50333545	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.111111
3	50333562	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.1875
3	50333569	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.1875
3	50333598	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.1
3	50333605	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.105263
3	50333644	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	51544836	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.153846
3	51551972	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.181818
3	51552002	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.3
3	52269287	A->G	-	ENSG00000164091	WDR82	protein_coding	Intergenic	.	.	Alu	0.2
3	52274350	A->G	-	ENSG00000164091	WDR82	protein_coding	Intergenic	.	.	Alu	0.181818
3	52415276	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.0714286
3	52476039	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.125
3	52476047	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.125
3	52643909	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.2
3	52689766	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.615385
3	52689767	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.714286
3	52689782	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.2
3	52690470	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.285714
3	53221689	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
3	53250605	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.142857
3	53250920	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.545455
3	53309113	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.25
3	53309127	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.214286
3	53317437	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.230769
3	53318086	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.133333
3	53330480	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.166667
3	53334077	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.133333
3	53334096	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	53340094	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.111111
3	53340197	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.0909091
3	53863883	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.571429
3	53863899	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.428571
3	53863908	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.769231
3	53863939	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.117647
3	53863999	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.0588235
3	53864003	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.0645161
3	53864039	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.137931
3	53864065	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.0909091
3	53864096	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.285714
3	53864102	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.444444
3	53864355	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.6875
3	53864378	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.444444
3	53864386	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.25
3	53864435	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.277778
3	53864475	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.714286
3	53864488	A->G	-	ENSG00000056736	IL17RB	protein_coding	Intergenic	.	.	Alu	0.105263
3	53866227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
3	53866571	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
3	53866646	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
3	56678887	A->G	-	ENSG00000163946	FAM208A	protein_coding	Intergenic	.	.	Alu	0.384615
3	56678889	A->G	-	ENSG00000163946	FAM208A	protein_coding	Intergenic	.	.	Alu	0.909091
3	56678936	A->G	-	ENSG00000163946	FAM208A	protein_coding	Intergenic	.	.	Alu	0.818182
3	57231709	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.166667
3	57233926	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.2
3	57233963	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.111111
3	57234009	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.136364
3	57234795	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.153846
3	57590455	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.117647
3	57591519	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57591563	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57592232	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0769231
3	57592304	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.157895
3	57592306	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.15
3	57592366	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0833333
3	57592388	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.08
3	57592452	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.12
3	57594086	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0909091
3	57594363	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.190476
3	57687682	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.142857
3	57687730	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.25
3	57769544	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.230769
3	58337071	A->G	+	ENSG00000168297	PXK	protein_coding	Intergenic	.	.	Alu	0.133333
3	58339300	A->G	+	ENSG00000168297	PXK	protein_coding	Intergenic	.	.	Alu	0.125
3	58347945	A->G	+	ENSG00000168297	PXK	protein_coding	Intergenic	.	.	Alu	0.4
3	58348720	A->G	+	ENSG00000168297	PXK	protein_coding	Intergenic	.	.	Alu	0.181818
3	58426565	A->G	+	.	.	.	Intergenic	.	.	Alu	0.179487
3	58426570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
3	58426602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
3	58426610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
3	58426611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	58426648	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
3	58426651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.116279
3	58426964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.04
3	58426998	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
3	58427044	A->G	+	.	.	.	Intergenic	.	.	Alu	0.322581
3	58427089	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0545455
3	58427105	A->G	+	.	.	.	Intergenic	.	.	Alu	0.301887
3	58427124	A->G	+	.	.	.	Intergenic	.	.	Alu	0.204082
3	58427125	A->G	+	.	.	.	Intergenic	.	.	Alu	0.14
3	58427128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173077
3	58427129	A->G	+	.	.	.	Intergenic	.	.	Alu	0.134615
3	58427132	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
3	58427192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
3	58427195	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
3	58427207	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	58427210	A->G	+	.	.	.	Intergenic	.	.	Alu	0.185185
3	58427215	A->G	+	.	.	.	Intergenic	.	.	Alu	0.846154
3	58427269	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
3	58427270	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	58427273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	58427282	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
3	58427370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
3	58427371	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
3	58427379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
3	58427398	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	58427425	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	58427426	A->G	+	.	.	.	Intergenic	.	.	Alu	0.195652
3	58427440	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
3	58427480	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
3	58427528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
3	58427533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.306122
3	58427534	A->G	+	.	.	.	Intergenic	.	.	Alu	0.145833
3	58427541	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
3	58427602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	63867413	A->G	+	ENSG00000285399	AC104162.2	bidirectional_promoter_lncRNA	Intergenic	.	.	Alu	0.272727
3	63867811	A->G	+	ENSG00000285399	AC104162.2	bidirectional_promoter_lncRNA	Intergenic	.	.	Alu	0.5
3	71071787	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	71328729	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.272727
3	71558899	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.3
3	71578251	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.416667
3	71767774	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
3	71770869	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
3	71776555	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0769231
3	71778006	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.215686
3	71778014	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.137255
3	71778037	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0652174
3	71778088	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0322581
3	71778097	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.137931
3	71778164	A->G	-	ENSG00000163421	PROK2	protein_coding	Intergenic	.	.	Alu	0.0967742
3	72435210	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.136364
3	72435226	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.1
3	73001387	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.153846
3	73001489	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.125
3	73001739	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.222222
3	73001809	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.2
3	73001812	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.2
3	73002350	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.133333
3	73003435	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.166667
3	73035689	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.7
3	81746459	A->G	-	ENSG00000114480	GBE1	protein_coding	Intergenic	.	.	Alu	0.272727
3	88066310	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.25
3	88066312	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.307692
3	88066364	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.153846
3	88066443	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.272727
3	88066493	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.3
3	88066494	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.3
3	88069548	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.25
4	16220586	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.151515
4	16220637	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.189189
4	16220640	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	16220654	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.09375
4	16220933	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0588235
4	16220942	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.15625
4	16220984	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.111111
4	16221013	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.166667
4	16221020	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.166667
4	16221238	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	16221242	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0697674
4	16221263	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0652174
4	16221290	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.121212
4	17815776	A->G	+	ENSG00000109805	NCAPG	protein_coding	Intergenic	.	.	Alu	0.25
4	17815785	A->G	+	ENSG00000109805	NCAPG	protein_coding	Intergenic	.	.	Alu	0.3
4	24566621	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.181818
4	24566622	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.272727
4	24566623	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.272727
4	24566663	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.181818
4	24580325	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.0869565
4	26329193	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.214286
4	26329267	A->G	+	ENSG00000168214	RBPJ	protein_coding	Intergenic	.	.	Alu	0.142857
4	37617747	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.111111
4	37617769	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.105263
4	37618940	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.0512821
4	37618945	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.05
4	37619742	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.08
4	37619770	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.08
4	37624556	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.363636
4	37624630	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.181818
4	37626306	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.208333
4	37626338	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.181818
4	37631858	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.230769
4	37631862	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.357143
4	37632349	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.545455
4	37632350	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.181818
4	37632353	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.7
4	37632407	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.1875
4	37632470	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.583333
4	37632474	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.230769
4	37680710	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.0625
4	37680739	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.148148
4	37864040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
4	37864041	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
4	37864495	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
4	37864519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
4	37864601	A->G	+	.	.	.	Intergenic	.	.	Alu	0.55
4	37864618	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
4	37864652	A->G	+	.	.	.	Intergenic	.	.	Alu	0.419355
4	37864670	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
4	37864686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.434783
4	37869527	A->G	+	ENSG00000249863	AC021106.1	processed_pseudogene	Intergenic	.	.	Alu	0.153846
4	37869535	A->G	+	ENSG00000249863	AC021106.1	processed_pseudogene	Intergenic	.	.	Alu	0.25
4	37871118	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
4	37871186	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
4	37872109	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
4	37872124	A->G	+	.	.	.	Intergenic	.	.	Alu	0.7
4	37872137	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
4	38682311	A->G	+	ENSG00000109787	KLF3	protein_coding	Intergenic	.	.	Alu	0.142857
4	39048809	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.181818
4	39532253	A->G	+	ENSG00000249348	UGDH-AS1	antisense	Intergenic	.	.	Alu	0.2
4	39532289	A->G	+	ENSG00000249348	UGDH-AS1	antisense	Intergenic	.	.	Alu	0.230769
4	39535470	A->G	+	ENSG00000249348	UGDH-AS1	antisense	Intergenic	.	.	Alu	1
4	39535524	A->G	+	ENSG00000249348	UGDH-AS1	antisense	Intergenic	.	.	Alu	0.153846
4	39864022	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.3
4	39897283	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39897607	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.3125
4	39897649	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39909318	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.153846
4	39911313	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.176471
4	39911684	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.3
4	39917657	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	39957596	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.363636
4	39958395	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.238095
4	39958657	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	39959872	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	39966832	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	39969446	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.125
4	40075600	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.181818
4	40086528	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.166667
4	40086572	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.166667
4	40086573	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.166667
4	40115259	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.1875
4	40115265	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.3125
4	40207785	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.272727
4	48142954	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.25
4	48143975	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.454545
4	48144132	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.25
4	48144133	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.125
4	48266716	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.153846
4	48614610	A->G	-	ENSG00000075539	FRYL	protein_coding	Intergenic	.	.	Alu	0.272727
4	48834588	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.153846
4	48834624	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.176471
4	48834644	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.35
4	48834650	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.285714
4	48834651	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.238095
4	48834725	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.117647
4	48857781	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.181818
4	52662563	A->G	+	.	.	.	Intergenic	.	.	Alu	0.75
4	55402582	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.181818
4	55402631	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.181818
4	56474899	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.133333
4	56918812	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.166667
4	56920547	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.153846
4	56920577	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.1875
4	56920615	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.166667
4	56920619	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.25
4	56962711	A->G	-	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.714286
4	56962734	A->G	-	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.272727
4	56962745	A->G	-	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.181818
4	56963169	A->G	-	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.142857
4	57007360	A->G	+	ENSG00000047315	POLR2B	protein_coding	Intergenic	.	.	Alu	0.545455
4	57088061	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.307692
4	57088071	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.181818
4	57090732	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.3
4	57090740	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.166667
4	57090753	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.142857
4	57109237	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.181818
4	57109314	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.117647
4	57109327	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.117647
4	57109330	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.105263
4	57109331	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.157895
4	67517238	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.142857
4	67517258	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.166667
4	67517267	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.230769
4	67517308	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.166667
4	67517326	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.294118
4	67517389	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.125
4	67517581	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.0909091
4	67517621	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.111111
4	67698903	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.105263
4	68327176	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.176471
4	68327179	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.157895
4	68327205	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	68327233	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.25
4	70829140	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.2
4	70829489	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	70829554	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	70830177	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.166667
4	70830576	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.1
4	70905332	A->G	+	ENSG00000173542	MOB1B	protein_coding	Intergenic	.	.	Alu	0.153846
4	73215980	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.181818
4	73250803	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.166667
4	73250881	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.214286
4	73250883	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.142857
4	73254533	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0869565
4	73255781	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.181818
4	74450318	A->G	+	ENSG00000109321	AREG	protein_coding	Intergenic	.	.	Alu	1
4	75664835	A->G	-	ENSG00000138757	G3BP2	protein_coding	Intergenic	.	.	Alu	0.1875
4	75665516	A->G	-	ENSG00000138757	G3BP2	protein_coding	Intergenic	.	.	Alu	0.307692
4	76129778	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.2
4	76130046	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.166667
4	77066049	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.166667
4	77068097	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.176471
4	79954245	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.0833333
4	79954269	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.111111
4	79954494	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.176471
4	79954510	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.25
4	79954527	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.142857
4	80019147	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.3
4	82877143	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.133333
4	82877167	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.142857
4	82883636	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.384615
4	82896587	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.454545
4	84963227	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.166667
4	84963324	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.142857
4	84964773	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.117647
4	84964811	A->G	-	ENSG00000163625	WDFY3	protein_coding	Intergenic	.	.	Alu	0.230769
4	86923195	A->G	-	ENSG00000285458	AC093827.5	protein_coding	Intergenic	.	.	Alu	0.333333
4	86981471	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	86998023	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	87022062	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.125
4	87023092	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	87024690	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.214286
4	87024691	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.142857
4	87024728	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	87041773	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.5
4	87051485	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.157895
4	87051487	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.173913
4	87051561	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	87052328	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.333333
4	87072714	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.5
4	87084357	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.222222
4	87085856	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.125
4	87085922	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	87085926	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	87085936	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	87085991	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.269231
4	87086001	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	87099495	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.0526316
4	87099512	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.153846
4	87099521	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.162162
4	87099526	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.2
4	87099566	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.1
4	87099618	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.136364
4	87101310	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	87101312	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.346154
4	87101343	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	87101346	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.08
4	87101408	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.142857
4	87101483	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.25
4	87101492	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.238095
4	88017551	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.2
4	88017645	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.2
4	98885572	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.142857
4	98885576	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.153846
4	98885616	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.181818
4	98912990	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.2
4	98919065	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.153846
5	10359859	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.266667
5	10359885	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.157895
5	10359886	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.105263
5	10360211	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.133333
5	10360219	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.117647
5	10360316	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.153846
5	10755930	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.105263
5	10755945	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.294118
5	10757492	A->G	-	ENSG00000112977	DAP	protein_coding	Intergenic	.	.	Alu	0.166667
5	14715271	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.2
5	14715340	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.153846
5	14716224	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.2
5	21467152	A->G	+	ENSG00000183666	GUSBP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
5	21467158	A->G	+	ENSG00000183666	GUSBP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
5	32152202	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.1875
5	32152768	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0588235
5	32155214	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.115385
5	32155413	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.1
5	32155417	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.142857
5	32155419	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.136364
5	32156263	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.217391
5	32156395	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.125
5	32156420	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.111111
5	32163488	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.08
5	32163546	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.107143
5	32164526	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.125
5	32165094	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.111111
5	32165326	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0540541
5	32165338	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.151515
5	32165500	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.1875
5	32165501	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0638298
5	32165561	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0512821
5	32166590	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.046875
5	32166768	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.1
5	32167239	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.391304
5	32167309	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.133333
5	32167904	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.191781
5	32167921	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.030303
5	32167977	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.131579
5	32171730	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0273973
5	32171785	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.05
5	32433929	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.133333
5	32433987	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.181818
5	32433993	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.3
5	32434990	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.153846
5	33451064	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.111111
5	33464056	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.461538
5	33464080	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.142857
5	33464110	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.352941
5	33464164	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.368421
5	34115537	A->G	-	ENSG00000273294	C1QTNF3-AMACR	protein_coding	Intergenic	.	.	Alu	0.3
5	34196223	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
5	34196311	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
5	34196334	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
5	34219917	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	1
5	34952893	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.294118
5	34952895	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.133333
5	34952913	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.2
5	34952970	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.214286
5	34953003	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.125
5	34953008	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.142857
5	34953030	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.25
5	34953313	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.333333
5	34953325	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.157895
5	34953463	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.181818
5	34953473	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.846154
5	37077705	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
5	40687126	A->G	+	ENSG00000171522	PTGER4	protein_coding	Intergenic	.	.	Alu	0.031746
5	42993574	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
5	42993587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
5	42993588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
5	42993617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
5	42993654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	42995679	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
5	42995694	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
5	42995733	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
5	42995745	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
5	42996583	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
5	42996595	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
5	42996600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
5	42996632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
5	42998674	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
5	42998740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
5	43024378	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.125
5	43024398	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.266667
5	43024399	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.142857
5	43046297	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.2
5	43051291	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.3
5	43051428	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.363636
5	43051512	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.285714
5	43051518	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.0909091
5	43051520	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.2
5	43051521	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.55
5	43051524	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.181818
5	43051527	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.181818
5	43051533	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.210526
5	43051536	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.111111
5	43051563	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.1
5	43051604	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.1875
5	43052118	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.3
5	43052126	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.357143
5	43052161	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.0952381
5	43052162	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.0952381
5	43052191	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.125
5	43052235	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.357143
5	43052241	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.277778
5	43052244	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.111111
5	43052250	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.647059
5	43052281	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.272727
5	43052317	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.2
5	43052318	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.25
5	43057925	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.153846
5	43069425	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.272727
5	43069442	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.153846
5	43069452	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.142857
5	43125330	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.285714
5	43125340	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.307692
5	43125393	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.153846
5	43129196	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0952381
5	43133273	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.222222
5	43133299	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.1875
5	43135632	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.181818
5	43141688	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.166667
5	44815566	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.125
5	44815567	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.111111
5	44815573	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.195122
5	44815626	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0350877
5	44815666	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.1
5	44815668	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.0612245
5	44816252	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.12
5	44816304	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.207547
5	50413687	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.666667
5	50413828	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.166667
5	50414307	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.346154
5	50414333	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.263158
5	50414352	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.4
5	50414431	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.416667
5	50414444	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.153846
5	50414478	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.25
5	50414484	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.333333
5	50697149	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.153846
5	50697180	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.181818
5	50697589	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.181818
5	50697609	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.3
5	50697610	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.3
5	50697613	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.4
5	50732829	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.461538
5	50732892	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.166667
5	50732894	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.125
5	50740583	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.2
5	56827792	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	56834578	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	56834594	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	56834598	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.105263
5	56840201	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.166667
5	56847432	A->G	+	ENSG00000237705	AC008937.2	antisense	Intergenic	.	.	Alu	0.105263
5	56860591	A->G	+	ENSG00000237705	AC008937.2	antisense	Intergenic	.	.	Alu	0.363636
5	56886283	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.153846
5	56886284	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.153846
5	56886886	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.25
5	56886933	A->G	+	ENSG00000095015	MAP3K1	protein_coding	Intergenic	.	.	Alu	0.266667
5	56945341	A->G	-	ENSG00000235635	AC016644.1	antisense	Intergenic	.	.	Alu	0.2
5	57214479	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.25
5	57214481	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.25
5	57241501	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	57241517	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	60867936	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
5	60867937	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
5	60868009	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
5	60868097	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
5	60868123	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
5	60868128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
5	60871939	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
5	60873663	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
5	61156651	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
5	61156686	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
5	61157396	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
5	61157437	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
5	61157444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
5	62314066	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.125
5	62321692	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.2
5	62321793	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.166667
5	64757279	A->G	-	ENSG00000153006	SREK1IP1	protein_coding	Intergenic	.	.	Alu	0.3
5	64757280	A->G	-	ENSG00000153006	SREK1IP1	protein_coding	Intergenic	.	.	Alu	0.3
5	66148662	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.210526
5	66151041	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.142857
5	68235238	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.0454545
5	68240633	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	1
5	69212313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	69213060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
5	69213070	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
5	69213111	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
5	69214810	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
5	69367018	A->G	-	ENSG00000085231	AK6	protein_coding	Intergenic	.	.	Alu	0.3
5	69980902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
5	71464258	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	71465434	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.2
5	71465537	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	71505764	A->G	+	ENSG00000145734	BDP1	protein_coding	Intergenic	.	.	Alu	0.2
5	72853226	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.133333
5	72853311	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.214286
5	72855096	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.130435
5	72855137	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.111111
5	72856258	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
5	72863531	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.125
5	72879570	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.125
5	72883857	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.142857
5	72883862	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.133333
5	72890885	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.357143
5	72890954	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.1
5	72890993	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.294118
5	76409061	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	80546265	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
5	80650835	A->G	-	ENSG00000228716	DHFR	protein_coding	Intergenic	.	.	Alu	1
5	81712921	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.133333
5	87396598	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.2
5	87398784	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.2
5	87398851	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.181818
5	87398861	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.166667
5	94087324	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.3
5	94087325	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
5	95077565	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.125
5	95077677	A->G	-	ENSG00000175471	MCTP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	95894183	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.166667
5	98891754	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98891775	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.3
5	98895590	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.230769
5	98918685	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98921990	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	98923450	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
5	98923526	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.107143
5	98923532	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98923536	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.115385
5	98923589	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0689655
5	98923590	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.172414
5	98923591	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	98923596	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	98923615	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.12
5	98923686	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.285714
5	98923999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	98924150	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0444444
5	98924161	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.134615
5	98924215	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98924245	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
6	13618661	A->G	+	ENSG00000225921	NOL7	protein_coding	Intergenic	.	.	Alu	0.2
6	13646383	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.2
6	13669796	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.230769
6	13691068	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.153846
6	13691082	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.166667
6	13706220	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.166667
6	13706232	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.166667
6	13706878	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.133333
6	13707148	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.304348
6	13707172	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.133333
6	13707187	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.125
6	13707218	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.125
6	15251086	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.137931
6	15251129	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.176471
6	15251141	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.194444
6	15251151	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.137931
6	15251178	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15251813	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.4375
6	15251816	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15251818	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15251857	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.176471
6	15251858	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1875
6	15251903	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.357143
6	15255288	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.176471
6	15277376	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15292726	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15293295	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.133333
6	15293321	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15293329	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.176471
6	15294257	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
6	15302345	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.363636
6	15302834	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15321893	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15321967	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15323664	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.166667
6	15324577	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15324616	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15335125	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.272727
6	15335274	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15335987	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15376649	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15417476	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15418398	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25
6	15418413	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.230769
6	17645180	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.2
6	17656083	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.3
6	17656105	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.166667
6	17656118	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.117647
6	17656119	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.117647
6	17656122	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.117647
6	17656123	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.176471
6	17657548	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0869565
6	17658165	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.142857
6	17658233	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.117647
6	17658309	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0833333
6	17658339	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.25
6	17658344	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.153846
6	17658392	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.166667
6	17659530	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0909091
6	17659541	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0909091
6	17659569	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0714286
6	17659570	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.172414
6	17659575	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.192308
6	17659611	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.157895
6	17661148	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.277778
6	17661231	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.133333
6	17661257	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.181818
6	17668585	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.166667
6	20405587	A->G	+	ENSG00000112242	E2F3	protein_coding	Intergenic	.	.	Alu	0.125
6	20405637	A->G	+	ENSG00000112242	E2F3	protein_coding	Intergenic	.	.	Alu	0.153846
6	20410683	A->G	+	ENSG00000112242	E2F3	protein_coding	Intergenic	.	.	Alu	0.111111
6	24708476	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.3
6	24710916	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.105263
6	26125804	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.380952
6	26125952	A->G	-	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.25
6	26129379	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.105263
6	26129422	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.142857
6	26135478	A->G	+	ENSG00000180573	HIST1H2AC	protein_coding	Intergenic	.	.	Alu	0.272727
6	29943642	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intergenic	.	.	Alu	1
6	29945334	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intergenic	.	.	Alu	0.307692
6	30200213	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.153846
6	30200225	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.142857
6	30200232	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.181818
6	30200235	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.181818
6	30200241	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.785714
6	30200276	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.333333
6	30587407	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.272727
6	30592051	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.166667
6	30600264	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
6	31538320	A->G	-	ENSG00000198563	DDX39B	protein_coding	Intergenic	.	.	Alu	0.181818
6	31754249	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.166667
6	31754250	A->G	+	ENSG00000204410	MSH5	protein_coding	Intergenic	.	.	Alu	0.153846
6	33307188	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.142857
6	33307244	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.166667
6	34390594	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.181818
6	34422655	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.15
6	34422662	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.388889
6	34422731	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.166667
6	34422732	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.181818
6	34422819	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.142857
6	34422863	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.105263
6	34422901	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.357143
6	34422915	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.1875
6	34422957	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.157895
6	34422969	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.0952381
6	34760254	A->G	+	ENSG00000124562	SNRPC	protein_coding	Intergenic	.	.	Alu	0.2
6	34761719	A->G	+	ENSG00000124562	SNRPC	protein_coding	Intergenic	.	.	Alu	0.2
6	35316240	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.166667
6	35570819	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	35570835	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	35650111	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.4
6	35650668	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35680346	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0714286
6	35680389	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.166667
6	35683263	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.238095
6	35683267	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.222222
6	35683304	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.272727
6	35683351	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.272727
6	35684214	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.142857
6	35684241	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.1
6	35684276	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.117647
6	35684281	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.411765
6	35684372	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.125
6	35684382	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.111111
6	35684394	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.111111
6	36101747	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36973875	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.615385
6	37832810	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	37842962	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	38120594	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.428571
6	38120600	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	42205128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
6	42266439	A->G	-	ENSG00000124496	TRERF1	protein_coding	Intergenic	.	.	Alu	0.166667
6	42783421	A->G	+	ENSG00000112624	BICRAL	protein_coding	Intergenic	.	.	Alu	0.461538
6	42940220	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
6	42940227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
6	42940232	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
6	42940317	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
6	42940339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
6	42942211	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42943354	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0606061
6	43029689	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0555556
6	43030363	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1875
6	43030364	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.3125
6	43030404	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.3
6	43030405	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.238095
6	43030406	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1
6	43030409	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.2
6	43030417	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1
6	43030479	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.125
6	43030484	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.153846
6	43030672	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.157895
6	43030708	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.117647
6	43030709	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.125
6	43030712	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1875
6	43030771	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.4
6	43030973	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.153846
6	43032314	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.428571
6	43032331	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.357143
6	43032450	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.2
6	43032527	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.181818
6	43032528	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.272727
6	43032534	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.363636
6	43032696	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.111111
6	43538005	A->G	+	ENSG00000124571	XPO5	protein_coding	Intergenic	.	.	Alu	0.166667
6	43617455	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.272727
6	43617741	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.153846
6	43617744	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.166667
6	43618195	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.142857
6	43618220	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.230769
6	43618256	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.2
6	44407431	A->G	+	ENSG00000096401	CDC5L	protein_coding	Intergenic	.	.	Alu	0.2
6	45523754	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.2
6	45523803	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.2
6	57056112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	57056182	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	57056260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
6	57056270	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
6	57056346	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
6	57056448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	57056461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	57056474	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
6	57056477	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	57056640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.185185
6	57056682	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	57056709	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	57056738	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	57056747	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	57056974	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
6	57057028	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	57057036	A->G	+	.	.	.	Intergenic	.	.	Alu	0.590909
6	57057056	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
6	57057081	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	57057129	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
6	57057148	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
6	57057185	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
6	57057503	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
6	57057511	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
6	57057571	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
6	57057572	A->G	+	.	.	.	Intergenic	.	.	Alu	0.857143
6	57057578	A->G	+	.	.	.	Intergenic	.	.	Alu	0.368421
6	57057579	A->G	+	.	.	.	Intergenic	.	.	Alu	0.368421
6	57057647	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
6	57057675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
6	57057920	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
6	57057978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
6	72643586	A->G	+	ENSG00000233844	KCNQ5-IT1	sense_intronic	Intergenic	.	.	Alu	0.545455
6	72690108	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.272727
6	72690111	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.181818
6	72690126	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.166667
6	72690165	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.181818
6	72698014	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.411765
6	72698034	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.5
6	72698465	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.0952381
6	72698466	A->G	+	ENSG00000185760	KCNQ5	protein_coding	Intergenic	.	.	Alu	0.0952381
6	73512467	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0454545
6	73512480	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0465116
6	73512502	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0408163
6	73513944	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0454545
6	73649174	A->G	-	ENSG00000119899	SLC17A5	protein_coding	Intergenic	.	.	Alu	0.2
6	73649175	A->G	-	ENSG00000119899	SLC17A5	protein_coding	Intergenic	.	.	Alu	0.2
6	75238881	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.142857
6	75604448	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	75625668	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	75637940	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.181818
6	75637964	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.153846
6	75638915	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.153846
6	75638984	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	75638990	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.272727
6	75641716	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.230769
6	75641720	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.214286
6	75641746	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.3125
6	79067182	A->G	-	ENSG00000146247	PHIP	protein_coding	Intergenic	.	.	Alu	0.181818
6	79068258	A->G	-	ENSG00000146247	PHIP	protein_coding	Intergenic	.	.	Alu	0.15
6	79068297	A->G	-	ENSG00000146247	PHIP	protein_coding	Intergenic	.	.	Alu	0.266667
6	81742417	A->G	-	ENSG00000112773	TENT5A	protein_coding	Intergenic	.	.	Alu	0.153846
6	85586834	A->G	-	ENSG00000135317	SNX14	protein_coding	Intergenic	.	.	Alu	0.2
6	85602635	A->G	-	ENSG00000271793	AL589666.1	protein_coding	Intergenic	.	.	Alu	0.2
6	85605329	A->G	-	ENSG00000271793	AL589666.1	protein_coding	Intergenic	.	.	Alu	0.692308
6	85605333	A->G	-	ENSG00000271793	AL589666.1	protein_coding	Intergenic	.	.	Alu	0.25
6	85616431	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0769231
6	85625658	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.214286
6	85625659	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.142857
6	85633428	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.363636
6	87158412	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.428571
6	87158553	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.3
6	87159740	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.384615
6	87159741	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.384615
6	87167410	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87167412	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.4
6	87167479	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.235294
6	87167530	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.1
6	87168539	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87185559	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.111111
6	87673758	A->G	-	.	.	.	Intergenic	.	.	Alu	0.368421
6	87673778	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	87674746	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	87682848	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	87688116	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.391304
6	87688123	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.125
6	87688194	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.1
6	87688326	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.133333
6	87688335	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.153846
6	87688583	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.4
6	87688634	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.8125
6	87688655	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.565217
6	87688667	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	87688707	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.0833333
6	89330622	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.461538
6	89330628	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.285714
6	89345478	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.3
6	89345480	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.2
6	99404889	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.190476
6	99405299	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.3
6	99405343	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.4375
6	99405355	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.4
6	99405769	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.181818
6	99419970	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.181818
7	11059514	A->G	+	ENSG00000106443	PHF14	protein_coding	Intergenic	.	.	Alu	1
7	11059521	A->G	+	ENSG00000106443	PHF14	protein_coding	Intergenic	.	.	Alu	0.333333
7	11059561	A->G	+	ENSG00000106443	PHF14	protein_coding	Intergenic	.	.	Alu	0.3
7	11059566	A->G	+	ENSG00000106443	PHF14	protein_coding	Intergenic	.	.	Alu	0.7
7	11059975	A->G	+	ENSG00000106443	PHF14	protein_coding	Intergenic	.	.	Alu	0.2
7	16654022	A->G	+	ENSG00000136261	BZW2	protein_coding	Intergenic	.	.	Alu	0.363636
7	16654759	A->G	+	ENSG00000136261	BZW2	protein_coding	Intergenic	.	.	Alu	0.3
7	16654791	A->G	+	ENSG00000136261	BZW2	protein_coding	Intergenic	.	.	Alu	0.166667
7	16654822	A->G	+	ENSG00000136261	BZW2	protein_coding	Intergenic	.	.	Alu	0.153846
7	21893957	A->G	-	ENSG00000105877	DNAH11	protein_coding	Intergenic	.	.	Alu	0.153846
7	23184827	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.272727
7	23184828	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.272727
7	23187867	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.08
7	23189432	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.272727
7	23510398	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.230769
7	23511182	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.157895
7	23511633	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.103448
7	23512359	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.5
7	23512360	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.176471
7	23512372	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.15
7	23512587	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0952381
7	23512591	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0909091
7	23512623	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.08
7	23512663	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.105263
7	23518077	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.117647
7	23518178	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.12
7	23519229	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.2
7	23519270	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.166667
7	23519311	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.166667
7	23519312	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.166667
7	25124901	A->G	-	ENSG00000172115	CYCS	protein_coding	Intergenic	.	.	Alu	0.477273
7	26204838	A->G	+	ENSG00000122565	CBX3	protein_coding	Intergenic	.	.	Alu	0.105263
7	26207738	A->G	+	ENSG00000122565	CBX3	protein_coding	Intergenic	.	.	Alu	0.0769231
7	26207779	A->G	+	ENSG00000122565	CBX3	protein_coding	Intergenic	.	.	Alu	0.0740741
7	26207780	A->G	+	ENSG00000122565	CBX3	protein_coding	Intergenic	.	.	Alu	0.107143
7	26208025	A->G	+	ENSG00000122565	CBX3	protein_coding	Intergenic	.	.	Alu	0.133333
7	32497240	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.2
7	32505511	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.4
7	32875435	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32876759	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.166667
7	32876773	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32876793	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32876845	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.307692
7	32877133	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.333333
7	32883114	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.111111
7	32883153	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	32883186	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	32883256	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.1
7	33053325	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.166667
7	33053326	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.181818
7	33056923	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.166667
7	33057399	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.2
7	33057411	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.166667
7	33057435	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.142857
7	35813424	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
7	37200763	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.2
7	37200845	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.2
7	38243029	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.185185
7	38243069	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.0909091
7	38243109	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.0645161
7	38243133	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.08
7	38243140	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.166667
7	38244707	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.1
7	38244790	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.0869565
7	38244816	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.208333
7	38244836	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.111111
7	38244839	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.0952381
7	38244895	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.285714
7	38245809	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.0833333
7	38245823	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.259259
7	38245831	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.233333
7	38245953	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.294118
7	38247421	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.0689655
7	38247476	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.0689655
7	38247539	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.107143
7	39959025	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.0909091
7	39959027	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.0833333
7	39961173	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.105263
7	39961201	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.153846
7	39961203	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.142857
7	39961238	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.166667
7	39961245	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.1
7	39961266	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.0833333
7	39961274	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.0869565
7	39961292	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.0909091
7	39961342	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.153846
7	39961343	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.307692
7	39961346	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.153846
7	39967360	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.133333
7	39967366	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.142857
7	40005051	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.272727
7	40005059	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.272727
7	43596658	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.117647
7	43596721	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.2
7	43597482	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.304348
7	43597499	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.111111
7	43597515	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.153846
7	43597570	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.4
7	43597700	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.142857
7	43597701	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.285714
7	43598863	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.0869565
7	43613744	A->G	-	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.181818
7	43615215	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.166667
7	43615237	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.153846
7	43615275	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.125
7	43615276	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.117647
7	43615288	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.266667
7	43615377	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.125
7	43616841	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.4
7	44830975	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.020202
7	44831110	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0204082
7	44833431	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.05
7	44836718	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.25
7	44837376	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.416667
7	44837642	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44837651	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44837660	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44838142	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0714286
7	44838453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0487805
7	44838459	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.179487
7	44838468	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.157895
7	44839332	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0857143
7	44840110	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.157895
7	44840138	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0869565
7	44840143	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0869565
7	44840359	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.157895
7	44840526	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.125
7	44840527	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.133333
7	44840649	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.272727
7	44840688	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0606061
7	44840731	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.151515
7	44840765	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.133333
7	44841668	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44842884	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0645161
7	44842973	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44842995	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.176471
7	44846528	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.105263
7	47957692	A->G	-	ENSG00000136273	HUS1	protein_coding	Intergenic	.	.	Alu	0.15
7	55454658	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.230769
7	55455212	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.235294
7	55455279	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.230769
7	55458036	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.142857
7	55736061	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	56052927	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.416667
7	56053633	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.125
7	56074916	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.3
7	56103525	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.0869565
7	56103569	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.0540541
7	56105573	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.115385
7	63913126	A->G	+	ENSG00000226581	AC092634.3	lincRNA	Intergenic	.	.	Alu	0.363636
7	64560609	A->G	-	ENSG00000173041	ZNF680	protein_coding	Intergenic	.	.	Alu	0.125
7	64560729	A->G	-	ENSG00000173041	ZNF680	protein_coding	Intergenic	.	.	Alu	0.333333
7	64560730	A->G	-	ENSG00000173041	ZNF680	protein_coding	Intergenic	.	.	Alu	0.111111
7	64669720	A->G	+	ENSG00000196247	ZNF107	protein_coding	Intergenic	.	.	Alu	0.210526
7	64669737	A->G	+	ENSG00000196247	ZNF107	protein_coding	Intergenic	.	.	Alu	0.166667
7	65002378	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.272727
7	65375672	A->G	+	ENSG00000146757	ZNF92	protein_coding	Intergenic	.	.	Alu	0.2
7	65376042	A->G	+	ENSG00000146757	ZNF92	protein_coding	Intergenic	.	.	Alu	0.125
7	65376078	A->G	+	ENSG00000146757	ZNF92	protein_coding	Intergenic	.	.	Alu	0.214286
7	65392676	A->G	+	ENSG00000146757	ZNF92	protein_coding	Intergenic	.	.	Alu	0.166667
7	65741007	A->G	-	ENSG00000272693	AC073107.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	65767789	A->G	-	ENSG00000275833	AC073107.2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	65767825	A->G	-	ENSG00000275833	AC073107.2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	66154696	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.153846
7	66154716	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.384615
7	66154721	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.461538
7	66154797	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	1
7	66155646	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.3
7	66156158	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.222222
7	66156159	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.222222
7	66156185	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.3125
7	66156194	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.176471
7	66156255	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.181818
7	66156617	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.142857
7	66157052	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.3
7	66157099	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.142857
7	66157112	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.133333
7	66157700	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.181818
7	66157703	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.272727
7	66157735	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.153846
7	66157894	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.5
7	66157896	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.2
7	66157924	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.272727
7	66589977	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	66590099	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	66590101	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	66590145	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	66590150	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	66590154	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	66590596	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	66590623	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.384615
7	66590645	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
7	66590658	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	66656700	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.416667
7	66683794	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66683853	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3125
7	66683925	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.136364
7	66684324	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.25
7	66684333	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66684337	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
7	66684350	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66684511	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1
7	66684516	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66684764	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66684842	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
7	66685231	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.130435
7	66685421	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0740741
7	66686054	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66688933	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66690655	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66715831	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.307692
7	66741729	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.272727
7	66741731	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.583333
7	66741754	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66744116	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
7	66744153	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.08
7	66744278	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66746919	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0645161
7	66753948	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0588235
7	66754209	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.266667
7	66785815	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66786462	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
7	66845261	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
7	66932936	A->G	+	ENSG00000106609	TMEM248	protein_coding	Intergenic	.	.	Alu	0.285714
7	66932998	A->G	+	ENSG00000106609	TMEM248	protein_coding	Intergenic	.	.	Alu	0.181818
7	67274163	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
7	67274164	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	67306303	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	67315943	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	67315948	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.545455
7	67315969	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	72982008	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	72995620	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	73514852	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.25
7	73514869	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.133333
7	73539154	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.181818
7	74178015	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.40625
7	74178020	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.09375
7	74178040	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0689655
7	74178067	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.1
7	74178162	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.09375
7	74178255	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.185185
7	74181013	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0740741
7	74182426	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.222222
7	74186300	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.133333
7	74186396	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0952381
7	74186415	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0769231
7	74186428	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0666667
7	74187210	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.133333
7	74187246	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.166667
7	74187287	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.2
7	74723665	A->G	+	ENSG00000263001	GTF2I	protein_coding	Intergenic	.	.	Alu	0.2
7	74880880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
7	74880907	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
7	74880940	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
7	74882054	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
7	75026065	A->G	+	.	.	.	Intergenic	.	.	Alu	1
7	75026452	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
7	75029578	A->G	+	ENSG00000274523	RCC1L	protein_coding	Intergenic	.	.	Alu	0.166667
7	75029583	A->G	+	ENSG00000274523	RCC1L	protein_coding	Intergenic	.	.	Alu	0.09375
7	75095550	A->G	+	ENSG00000174428	GTF2IRD2B	protein_coding	Intergenic	.	.	Alu	0.2
7	75368993	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	75368997	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	75526253	A->G	-	ENSG00000127957	PMS2P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	75526636	A->G	-	ENSG00000127957	PMS2P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
7	75526725	A->G	-	ENSG00000127957	PMS2P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
7	75526742	A->G	-	ENSG00000127957	PMS2P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	75882459	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.133333
7	75882461	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.133333
7	75882568	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.133333
7	75882587	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.214286
7	76340050	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.166667
7	76340059	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.142857
7	76340937	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.105263
7	76340977	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.117647
7	76345772	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.384615
7	76345813	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.181818
7	76345894	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.214286
7	76347346	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.125
7	76347504	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.08
7	76347510	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.115385
7	76347534	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.115385
7	76348720	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.214286
7	76353309	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.166667
7	76353310	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.142857
7	76353318	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.125
7	76353350	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.368421
7	76353351	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.157895
7	76353979	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.208333
7	76353991	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.172414
7	76353992	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.137931
7	77701990	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.181818
7	87162239	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intergenic	.	.	Alu	0.2
7	87162291	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intergenic	.	.	Alu	0.2
7	90614214	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.235294
7	90614225	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.125
7	90627265	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.0952381
7	90627310	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.166667
7	90627349	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.416667
7	90627351	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.181818
7	90627395	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
7	92768081	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.176471
7	92811909	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0810811
7	92811969	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.111111
7	92812649	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0967742
7	92812658	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0606061
7	92812698	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0666667
7	98108963	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.166667
7	98108966	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.230769
7	98109001	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.166667
7	99038949	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.2
7	99497453	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.166667
7	99497672	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0833333
7	99497810	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.65625
7	99497848	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.125
8	12595723	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.5
8	17500686	A->G	+	ENSG00000003989	SLC7A2	protein_coding	Intergenic	.	.	Alu	0.25
8	17931422	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.428571
8	17931428	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.181818
8	17973509	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.2
8	22106315	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
8	22631940	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.25
8	22633225	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.181818
8	22633226	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.272727
8	23062256	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.133333
8	23062449	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.2
8	23066708	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.0833333
8	23066775	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.103448
8	23067013	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.117647
8	23067116	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.285714
8	23067245	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.153846
8	23187475	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
8	23187530	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
8	23187531	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
8	23188272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
8	23188321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.26087
8	23188324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.318182
8	23188325	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
8	23188444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.538462
8	23188454	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
8	23188500	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
8	23188508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.470588
8	23188512	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4375
8	23188805	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
8	23188806	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
8	23188810	A->G	-	.	.	.	Intergenic	.	.	Alu	0.727273
8	23188886	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
8	23188892	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16129
8	23188960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.52
8	23188987	A->G	-	.	.	.	Intergenic	.	.	Alu	0.185185
8	23189005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
8	23189019	A->G	-	.	.	.	Intergenic	.	.	Alu	0.52381
8	23189046	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
8	23189062	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
8	23189109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.275862
8	25186477	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	25186478	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	25186536	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.3
8	25186599	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.1
8	25186613	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.142857
8	25186971	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.0952381
8	25187115	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.25
8	25192522	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.285714
8	25192523	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.285714
8	25192529	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.230769
8	25192606	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.08
8	25197637	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.4
8	25197640	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.333333
8	25197663	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.25
8	25197701	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.166667
8	25198333	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.25
8	25198385	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.117647
8	25198386	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.176471
8	25198438	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.181818
8	25198451	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.166667
8	25198452	A->G	+	ENSG00000147459	DOCK5	protein_coding	Intergenic	.	.	Alu	0.166667
8	25452973	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.363636
8	26386519	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.0833333
8	26386534	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.0833333
8	26386568	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.111111
8	27806758	A->G	+	ENSG00000171320	ESCO2	protein_coding	Intergenic	.	.	Alu	0.166667
8	27806778	A->G	+	ENSG00000171320	ESCO2	protein_coding	Intergenic	.	.	Alu	0.230769
8	27806816	A->G	+	ENSG00000171320	ESCO2	protein_coding	Intergenic	.	.	Alu	0.111111
8	28897245	A->G	+	ENSG00000147421	HMBOX1	protein_coding	Intergenic	.	.	Alu	0.166667
8	28907944	A->G	+	ENSG00000147421	HMBOX1	protein_coding	Intergenic	.	.	Alu	0.2
8	28907945	A->G	+	ENSG00000147421	HMBOX1	protein_coding	Intergenic	.	.	Alu	0.3
8	30081530	A->G	-	ENSG00000133872	SARAF	protein_coding	Intergenic	.	.	Alu	1
8	30114377	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	30114408	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	30117279	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	30184222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
8	30184278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	37866091	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.230769
8	37876083	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.176471
8	37876085	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.111111
8	37879151	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.133333
8	37880214	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0789474
8	37883261	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0461538
8	37883275	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0350877
8	37883327	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0363636
8	37884622	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0363636
8	37887374	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	37887448	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.12
8	37887455	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.1
8	37887468	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	37888682	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0555556
8	37889851	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.133333
8	37889852	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.25
8	37889869	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.146341
8	37889880	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.08
8	37889889	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0555556
8	37889908	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0731707
8	37889916	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	37889948	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.107143
8	37890718	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.047619
8	37890723	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.302326
8	37890728	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	37890729	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.108108
8	37892543	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.111111
8	37892552	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.111111
8	37893268	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0566038
8	37893566	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.047619
8	37893594	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0357143
8	37893678	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0277778
8	37893690	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0289855
8	37893707	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0289855
8	37893708	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0422535
8	37893774	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.169811
8	37893782	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.157895
8	37896188	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	37898319	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	37898504	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	38141001	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.125
8	38142252	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.2
8	38142306	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.2
8	38216710	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	38216726	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
8	38217555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	38217572	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
8	38217588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.583333
8	38217594	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38217604	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38221378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38221391	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
8	38221400	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38221407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38377190	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.166667
8	38377217	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.166667
8	38377258	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.2
8	38815513	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	38907936	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.333333
8	38907956	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38911767	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.181818
8	38911777	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.181818
8	39021436	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.2
8	39021464	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.4
8	41583037	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.2
8	42047511	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.117647
8	42752478	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
8	42752487	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	42752520	A->G	-	.	.	.	Intergenic	.	.	Alu	0.555556
8	42752539	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	42752540	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
8	43062516	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.153846
8	43062517	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.153846
8	43125314	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0210526
8	47785639	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.3
8	47948289	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.2
8	51854684	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.583333
8	51891515	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.125
8	52696137	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.125
8	52696142	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.230769
8	52700307	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.133333
8	52700459	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	52702682	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.3
8	52706527	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	52706543	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.529412
8	52706551	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.357143
8	52708865	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.8
8	52708910	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.384615
8	52708991	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.318182
8	52710031	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.1875
8	52710077	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.5625
8	54080168	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.181818
8	54099769	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.166667
8	55826724	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
8	55826745	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	55826750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
8	55889111	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55889455	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55890827	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.12
8	55891197	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55895526	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0952381
8	55902107	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55903866	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55903869	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55903873	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55907702	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55907710	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55907711	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55907719	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	56069463	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.166667
8	56069563	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.3
8	56070629	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.08
8	56965069	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.2
8	56965237	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.166667
8	58655042	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.3
8	58657906	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.45
8	58657921	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.555556
8	58658582	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.1875
8	60525362	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.307692
8	60527183	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.115385
8	60527200	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	60532663	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.117647
8	60532668	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.133333
8	60532730	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.210526
8	60532744	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0909091
8	60532745	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
8	60533729	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.125
8	60533769	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.214286
8	60541475	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	60542435	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.133333
8	60543823	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.3
8	60557695	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.3
8	65715486	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.4
8	65715515	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.545455
8	65715516	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.181818
8	65730836	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.2
8	65730840	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.7
8	65730841	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.8
8	65730909	A->G	-	ENSG00000066855	MTFR1	protein_coding	Intergenic	.	.	Alu	0.666667
8	65820310	A->G	-	ENSG00000205268	PDE7A	protein_coding	Intergenic	.	.	Alu	0.153846
8	65820334	A->G	-	ENSG00000205268	PDE7A	protein_coding	Intergenic	.	.	Alu	0.117647
8	65820339	A->G	-	ENSG00000205268	PDE7A	protein_coding	Intergenic	.	.	Alu	0.133333
8	65820382	A->G	-	ENSG00000205268	PDE7A	protein_coding	Intergenic	.	.	Alu	0.285714
8	66717797	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.272727
8	66717804	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.272727
8	66718178	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.181818
8	66718629	A->G	+	ENSG00000104205	SGK3	protein_coding	Intergenic	.	.	Alu	0.153846
8	67069745	A->G	+	ENSG00000121022	COPS5	protein_coding	Intergenic	.	.	Alu	0.153846
8	67069759	A->G	+	ENSG00000121022	COPS5	protein_coding	Intergenic	.	.	Alu	0.133333
8	67070828	A->G	+	ENSG00000121022	COPS5	protein_coding	Intergenic	.	.	Alu	0.4
8	67070893	A->G	+	ENSG00000121022	COPS5	protein_coding	Intergenic	.	.	Alu	0.2
8	67084714	A->G	+	ENSG00000104218	CSPP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	67324263	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.25
8	67324279	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.538462
8	67326104	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
8	70576632	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.6
8	70576635	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.125
8	70578238	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.214286
8	70578303	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
8	70578307	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.592593
8	70578327	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
8	70578438	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.181818
8	70578455	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.214286
8	70578508	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.136364
8	70578521	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	70587279	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.2
8	73814754	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.3
8	73815133	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.5
8	73815159	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.142857
8	73815227	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.666667
8	73815263	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.357143
8	73815280	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.105263
8	73815360	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.5
8	73815368	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.125
8	73862179	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.2
8	73873510	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.153846
8	73873561	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.35
8	73873580	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.0869565
8	73873625	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.318182
8	73970201	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.0606061
8	73970234	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.08
8	73978180	A->G	+	ENSG00000175606	TMEM70	protein_coding	Intergenic	.	.	Alu	0.142857
8	80507790	A->G	+	ENSG00000205189	ZBTB10	protein_coding	Intergenic	.	.	Alu	0.2
8	81657343	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
8	81657352	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
8	81657369	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	81676912	A->G	-	ENSG00000133731	IMPA1	protein_coding	Intergenic	.	.	Alu	0.166667
8	89781436	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.125
8	89781466	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.15
8	89781467	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.210526
8	89782004	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.111111
8	89782009	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.294118
8	89782060	A->G	+	ENSG00000104312	RIPK2	protein_coding	Intergenic	.	.	Alu	0.15
8	94532768	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.3
8	94549975	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.214286
8	94550045	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.294118
8	97648581	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.0833333
8	97654844	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.181818
8	97654858	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.230769
8	97654890	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.111111
8	97654914	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.111111
8	97654949	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.117647
8	97654971	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.2
8	97655012	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.107143
8	97656374	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.3
8	97656404	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.2
8	97674885	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.166667
8	97674928	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.2
8	97674984	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.111111
8	97675071	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.272727
8	97694712	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.3
8	97709004	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.6
8	97709143	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.545455
8	97709144	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.363636
8	97728927	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	97728935	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
8	97729116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
8	97729680	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
8	97729682	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
9	15498316	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.130435
9	15498334	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	15498382	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.210526
9	15503948	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.3
9	15504018	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.2
9	15504650	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.2
9	19240913	A->G	+	ENSG00000137145	DENND4C	protein_coding	Intergenic	.	.	Alu	0.181818
9	33027735	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0416667
9	33027782	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0357143
9	33035156	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.103448
9	33035196	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.16129
9	33035225	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0714286
9	33035227	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.107143
9	33035307	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.136364
9	33035650	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0606061
9	33035669	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.111111
9	33035731	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0645161
9	33074966	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.181818
9	33074969	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.181818
9	33074976	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.153846
9	33074977	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.153846
9	33821246	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.176471
9	34043304	A->G	-	ENSG00000137073	UBAP2	protein_coding	Intergenic	.	.	Alu	0.2
9	34180329	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	34182394	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	34182447	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	34183827	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.25
9	34183883	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.368421
9	34183910	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.25
9	34183970	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.388889
9	34193087	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.0909091
9	34201043	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.307692
9	34201066	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	34205941	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	35494419	A->G	+	ENSG00000198853	RUSC2	protein_coding	Intergenic	.	.	Alu	0.4
9	36485057	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.181818
9	36678643	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
9	37504590	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	37505575	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
9	37505576	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
9	37505605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	37505639	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	37505654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	37885550	A->G	-	ENSG00000122696	SLC25A51	protein_coding	Intergenic	.	.	Alu	0.117647
9	37886974	A->G	-	ENSG00000122696	SLC25A51	protein_coding	Intergenic	.	.	Alu	0.181818
9	70269417	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0666667
9	70269473	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.214286
9	70304189	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.117647
9	70304299	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.15
9	70304314	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.176471
9	70304328	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.125
9	70304467	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.315789
9	70304540	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.2
9	70304580	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.1875
9	70304673	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.166667
9	71905964	A->G	-	ENSG00000107362	ABHD17B	protein_coding	Intergenic	.	.	Alu	0.1
9	71906008	A->G	-	ENSG00000107362	ABHD17B	protein_coding	Intergenic	.	.	Alu	0.125
9	73154661	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.021097
9	73154678	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0286885
9	73157556	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.0714286
9	76461390	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.125
9	76464297	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.181818
9	76464329	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.181818
9	76465216	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.153846
9	77775863	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.272727
9	77881615	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.727273
9	77881881	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.454545
9	77882016	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.4
9	77882026	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.454545
9	77882030	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	77895076	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.545455
9	77895086	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.272727
9	77895090	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.333333
9	77985250	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.166667
9	77985261	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.5
9	77994071	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.307692
9	77995723	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.363636
9	78014506	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	78014520	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	78014524	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	83673462	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.166667
9	83673940	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0666667
9	83684703	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.2
9	83684758	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.166667
9	83704576	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.16
9	83704582	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	83704653	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.333333
9	83704710	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	83704743	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0869565
9	83704769	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.117647
9	83705319	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	83705337	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.24
9	83705338	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.192308
9	83705394	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.153846
9	83705429	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.133333
9	83705507	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.166667
9	85543995	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
9	85544066	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
9	85544538	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
9	86266788	A->G	-	ENSG00000135070	ISCA1	protein_coding	Intergenic	.	.	Alu	0.125
9	91294382	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.357143
9	91294399	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.142857
9	91350635	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.3
9	91353224	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.25
9	91353287	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.2
9	91353291	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.133333
9	91353292	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.133333
9	91353314	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.2
9	91353320	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.2
9	91354046	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.125
9	91354056	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.0952381
9	91354085	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.1875
9	97631732	A->G	-	ENSG00000136925	TSTD2	protein_coding	Intergenic	.	.	Alu	0.214286
9	97631757	A->G	-	ENSG00000136925	TSTD2	protein_coding	Intergenic	.	.	Alu	0.166667
9	97631762	A->G	-	ENSG00000136925	TSTD2	protein_coding	Intergenic	.	.	Alu	0.4
9	98063681	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.2
9	98065391	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.166667
9	98065458	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.181818
9	98068362	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.153846
9	98068765	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.166667
10	11177205	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.176471
10	11239859	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.105263
10	11239889	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.111111
10	11239911	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.117647
10	11239954	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.4375
10	11239973	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.117647
10	11240031	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.133333
10	11241239	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.384615
10	11241300	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.307692
10	11241317	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.5
10	11241383	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.2
10	11241389	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.571429
10	11241391	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.153846
10	11241397	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.333333
10	11281623	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.2
10	12025388	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.2
10	12025427	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.2
10	12025429	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.266667
10	12025435	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.272727
10	12025439	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.181818
10	12025868	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.235294
10	12025884	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.153846
10	12137018	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.166667
10	12152535	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.2
10	12152550	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.454545
10	12199892	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.25
10	12200830	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.166667
10	12200858	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.2
10	12217995	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.3
10	12352354	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.142857
10	12352423	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.1
10	12352876	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.416667
10	12352944	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.5
10	14552619	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.133333
10	14566962	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.181818
10	14575426	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.111111
10	14575430	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.111111
10	14576322	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.181818
10	14576432	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.461538
10	14576443	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.285714
10	14582649	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.2
10	14599559	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0434783
10	14599585	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0638298
10	14600742	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.117647
10	14600754	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.15
10	14601039	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0512821
10	14601056	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0625
10	17318226	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0205479
10	17318746	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.196078
10	17318756	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0833333
10	17318764	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.118644
10	17318794	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0625
10	17318820	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.136364
10	17318822	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.181818
10	17318823	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.136364
10	17319174	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0731707
10	17319195	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0617284
10	17319243	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0857143
10	17319244	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.144928
10	17319254	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.227273
10	17319256	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.0655738
10	17319272	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.671429
10	17319294	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.774194
10	17319297	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.111111
10	17319306	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.238806
10	17446812	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.153846
10	17446828	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.153846
10	17446962	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.133333
10	17447128	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.153846
10	17447169	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.133333
10	17447196	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.117647
10	17447197	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.133333
10	17447222	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.2
10	17447294	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.2
10	17447354	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.2
10	17447380	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.166667
10	17447928	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.3125
10	17447938	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.142857
10	17448076	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.294118
10	17448080	A->G	-	ENSG00000148488	ST8SIA6	protein_coding	Intergenic	.	.	Alu	0.368421
10	17491690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
10	17492439	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
10	17492448	A->G	-	.	.	.	Intergenic	.	.	Alu	0.411765
10	17492762	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
10	17492889	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
10	17492922	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
10	17517331	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	17520454	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
10	17520466	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
10	17520476	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
10	17520746	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
10	17520785	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
10	17520786	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	17521936	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
10	17521950	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
10	17522016	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
10	17522025	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
10	17534507	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
10	17534511	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
10	17534513	A->G	-	.	.	.	Intergenic	.	.	Alu	0.615385
10	17534570	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	17534575	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
10	17535709	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
10	17535731	A->G	-	.	.	.	Intergenic	.	.	Alu	0.259259
10	17536920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.434783
10	17536934	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
10	17536939	A->G	-	.	.	.	Intergenic	.	.	Alu	0.647059
10	17536973	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
10	17537063	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
10	17598009	A->G	-	ENSG00000165996	HACD1	protein_coding	Intergenic	.	.	Alu	0.2
10	17598043	A->G	-	ENSG00000165996	HACD1	protein_coding	Intergenic	.	.	Alu	0.133333
10	17686420	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0625
10	17686446	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.645161
10	17686454	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0857143
10	17686476	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.181818
10	17686477	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0882353
10	17686516	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.666667
10	17686551	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.125
10	17686557	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.227273
10	17686574	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.352941
10	17686594	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.2
10	17686638	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0909091
10	17686651	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.73913
10	17688521	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.272727
10	17688567	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.166667
10	21671099	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.3
10	21671112	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.166667
10	21671119	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.454545
10	21671136	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.5
10	21671160	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.181818
10	21671184	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.272727
10	21671938	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.153846
10	21872302	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	21875248	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21875777	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.153846
10	21875781	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	21875785	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.4
10	21875801	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.133333
10	21875842	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.153846
10	21875849	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.461538
10	21875884	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21877149	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.214286
10	21877152	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.214286
10	21882102	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	21952828	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	21959235	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.266667
10	21959262	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.375
10	21959525	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.105263
10	21959614	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.153846
10	21959710	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.117647
10	21968675	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.214286
10	21969041	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.666667
10	21969061	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	21969137	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.375
10	21969141	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.4
10	21983306	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.307692
10	21983468	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.117647
10	21986214	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.307692
10	21988726	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.272727
10	26570740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
10	26760627	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.153846
10	26760724	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.7
10	26760727	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.25
10	26760766	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.3
10	26821040	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26821063	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.2
10	26847490	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26847529	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.133333
10	27115404	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.153846
10	27126265	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.153846
10	27126277	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.2
10	27126325	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.142857
10	27140575	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.105263
10	27140678	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.111111
10	27142916	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.166667
10	27142920	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.333333
10	27143125	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.25
10	27143213	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.0869565
10	27143247	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.105263
10	27143252	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.333333
10	27143269	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.388889
10	27143286	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.1
10	27143309	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.0869565
10	28235034	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.307692
10	28267833	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.333333
10	28267941	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.3
10	28273000	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.2
10	28289176	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.153846
10	28294051	A->G	-	ENSG00000150054	MPP7	protein_coding	Intergenic	.	.	Alu	0.166667
10	28525125	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.111111
10	28525236	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.222222
10	28525238	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.263158
10	28525259	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0909091
10	28525277	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.310345
10	28525278	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.133333
10	28525313	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.12
10	28539557	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.222222
10	28544135	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.157895
10	28564184	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.5
10	28564185	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.307692
10	28564207	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.5
10	29460041	A->G	+	ENSG00000224597	SVIL-AS1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
10	30343301	A->G	-	ENSG00000107951	MTPAP	protein_coding	Intergenic	.	.	Alu	0.176471
10	30343319	A->G	-	ENSG00000107951	MTPAP	protein_coding	Intergenic	.	.	Alu	0.466667
10	30343369	A->G	-	ENSG00000107951	MTPAP	protein_coding	Intergenic	.	.	Alu	0.214286
10	30446154	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.272727
10	31357863	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.4
10	32012353	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.166667
10	32012363	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.142857
10	32012390	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.153846
10	32015995	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.2
10	32015996	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.6
10	32360706	A->G	-	ENSG00000229327	AL391839.1	antisense	Intergenic	.	.	Alu	0.142857
10	35354419	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.133333
10	35354420	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.3125
10	43149334	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.153846
10	43149882	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.181818
10	43149912	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.3
10	43171492	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.166667
10	43173831	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.166667
10	43173850	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.166667
10	43403268	A->G	-	ENSG00000169813	HNRNPF	protein_coding	Intergenic	.	.	Alu	0.0952381
10	43403269	A->G	-	ENSG00000169813	HNRNPF	protein_coding	Intergenic	.	.	Alu	0.105263
10	45728306	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.117647
10	45728477	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.818182
10	45728483	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.3
10	45728484	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.5
10	45869132	A->G	-	ENSG00000239883	PARGP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
10	45869144	A->G	-	ENSG00000239883	PARGP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
10	45975860	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.333333
10	45975901	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.1875
10	45979390	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.181818
10	45993302	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.2
10	49957069	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.4
10	49963809	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.2
10	50069165	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.428571
10	50069171	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.545455
10	50069172	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.545455
10	58345414	A->G	+	ENSG00000072401	UBE2D1	protein_coding	Intergenic	.	.	Alu	0.2
10	63179570	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.3
10	63179585	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63179721	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63180105	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.111111
10	63191337	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63220999	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63231549	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.105263
10	63231576	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0769231
10	63231631	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0689655
10	63231935	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63249829	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.272727
10	63260820	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.363636
10	63261325	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0465116
10	63261328	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0681818
10	63261335	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0714286
10	63261389	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0526316
10	63261437	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0689655
10	63261468	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	63261498	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0606061
10	63261529	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.2
10	67886411	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.666667
10	67890156	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	67890239	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.153846
10	67890258	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.142857
10	67890612	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.214286
10	67890626	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.3125
10	67892446	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67892702	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67894958	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67895348	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.214286
10	67896977	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67897494	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.230769
10	67897504	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67897544	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.111111
10	67897561	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.176471
10	67903594	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	68752721	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.25
10	68758875	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.307692
10	68758919	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.133333
10	68758924	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.142857
10	68959373	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.384615
10	68974935	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.117647
10	69094644	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.111111
10	69094645	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.108696
10	69094692	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0869565
10	69094693	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0487805
10	69095210	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0625
10	69099375	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.163265
10	69099426	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.05
10	69099514	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0512821
10	69099567	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0666667
10	69100045	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.08
10	69100056	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0740741
10	69100098	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.193548
10	69100099	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.125
10	69100331	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0697674
10	69100339	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0851064
10	69103137	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.142857
10	69103213	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.181818
10	70168509	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.0769231
10	70168532	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.075
10	70203472	A->G	-	ENSG00000180817	PPA1	protein_coding	Intergenic	.	.	Alu	0.2
10	70207561	A->G	-	ENSG00000180817	PPA1	protein_coding	Intergenic	.	.	Alu	0.166667
10	70222091	A->G	-	ENSG00000180817	PPA1	protein_coding	Intergenic	.	.	Alu	0.117647
10	70222106	A->G	-	ENSG00000180817	PPA1	protein_coding	Intergenic	.	.	Alu	0.111111
10	70222115	A->G	-	ENSG00000180817	PPA1	protein_coding	Intergenic	.	.	Alu	0.142857
10	70230030	A->G	-	ENSG00000180817	PPA1	protein_coding	Intergenic	.	.	Alu	0.142857
10	70416499	A->G	+	ENSG00000148730	EIF4EBP2	protein_coding	Intergenic	.	.	Alu	0.181818
10	71758091	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.1
10	71758108	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.1
10	71758117	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.117647
10	71758771	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.272727
10	72719972	A->G	+	ENSG00000156026	MCU	protein_coding	Intergenic	.	.	Alu	0.2
10	73157126	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.125
10	73158533	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.2
10	73158653	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.153846
10	73487110	A->G	-	ENSG00000107758	PPP3CB	protein_coding	Intergenic	.	.	Alu	0.2
10	73670980	A->G	-	ENSG00000271848	AC073389.2	antisense	Intergenic	.	.	Alu	0.3
10	73776354	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.103448
10	73776414	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0909091
10	73776420	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0869565
10	73776436	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.695652
10	73776437	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0909091
10	73776442	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.08
10	73776478	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0666667
10	73776525	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0952381
10	73776526	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.227273
10	73776527	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.333333
10	73776534	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.736842
10	73776537	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.111111
10	73776554	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.125
10	73776560	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.12
10	73776577	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.117647
10	73776596	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.222222
10	73776730	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.08
10	73776744	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.103448
10	73776780	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.322581
10	73776797	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.444444
10	73776809	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.190476
10	73776819	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.5
10	73776821	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.107143
10	73776825	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.138889
10	73776939	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0625
10	73776940	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.15625
10	73776953	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0833333
10	73777619	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0689655
10	73777624	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.193548
10	73777684	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0833333
10	73777735	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.1
10	73777738	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.1
10	73777891	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.176471
10	73777908	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.125
10	73777934	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0857143
10	73778343	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.428571
10	73778345	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.25
10	73778350	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.5625
10	74711871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
10	74711873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
10	74713381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
10	75116949	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.166667
10	75116994	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.2
10	75117008	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.153846
10	75119227	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.153846
10	75119811	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.230769
10	75121012	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.153846
10	75121020	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.25
10	75122545	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.3
10	75123889	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.2
10	75212511	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.166667
10	75213280	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.272727
10	75213348	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.2
10	75217074	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.166667
10	75217422	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.117647
10	75217426	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.117647
10	75217478	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	75217519	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intergenic	.	.	Alu	0.173913
10	75444942	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.3
10	75444955	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.230769
10	75444975	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.4
10	75445022	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.235294
10	75445030	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.235294
10	75445041	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.25
10	75445046	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.133333
10	75445058	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.105263
10	75445070	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75463801	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.25
10	75467802	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75483221	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.3
10	75526151	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.6
10	75526165	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75526597	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.214286
10	75526620	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75526627	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
10	75526643	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.384615
10	75526652	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.153846
10	75526671	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.214286
10	75526706	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
10	75526709	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.6
10	75526725	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.25
10	75526760	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.6
10	75526762	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
10	75526787	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.5
10	75526800	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.2
10	75526804	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.272727
10	75527882	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75527883	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.181818
10	75589497	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.153846
10	75589498	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.153846
10	75590885	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.4
10	75690874	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.166667
10	75690898	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.230769
10	75691978	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.153846
10	75748163	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.272727
10	75808579	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.25
10	75808610	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.230769
10	75808614	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.125
10	75849499	A->G	+	ENSG00000148655	LRMDA	protein_coding	Intergenic	.	.	Alu	0.333333
10	79093386	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.3
10	79093444	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.153846
10	79110828	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.545455
10	79110829	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.545455
10	86515586	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.307692
10	87871551	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.214286
10	87871595	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.111111
10	87871598	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0454545
10	87871660	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.25
10	87871666	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.235294
10	87873062	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.181818
10	87873095	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0714286
10	87873115	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.047619
10	87873118	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.121951
10	87873159	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0714286
10	87873173	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0444444
10	87873197	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0625
10	87873199	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0392157
10	87890815	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0769231
10	87890844	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0909091
10	87890845	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0869565
10	87890890	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0952381
10	87890959	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0740741
10	87908484	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.133333
10	87908520	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.285714
10	87908526	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.166667
10	89721470	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.166667
10	89721580	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.266667
10	90904691	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.2
10	92293115	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.384615
10	92293175	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.2
10	92293199	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.1
10	92293205	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.1
10	92293218	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.105263
10	92293245	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.235294
10	92293248	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.1875
10	92293542	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
10	92293662	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.769231
10	92293669	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.214286
10	92293702	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.277778
10	92293703	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.611111
10	92297988	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.1875
10	92298027	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.2
10	92307684	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.357143
10	92571207	A->G	-	ENSG00000119912	IDE	protein_coding	Intergenic	.	.	Alu	0.2
10	92571215	A->G	-	ENSG00000119912	IDE	protein_coding	Intergenic	.	.	Alu	0.181818
10	92571233	A->G	-	ENSG00000119912	IDE	protein_coding	Intergenic	.	.	Alu	0.307692
10	92571251	A->G	-	ENSG00000119912	IDE	protein_coding	Intergenic	.	.	Alu	0.230769
10	94605317	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.0487805
10	94605345	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.0645161
10	94605357	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	Intergenic	.	.	Alu	0.0833333
10	95691281	A->G	-	ENSG00000119977	TCTN3	protein_coding	Intergenic	.	.	Alu	0.2
10	95691290	A->G	-	ENSG00000119977	TCTN3	protein_coding	Intergenic	.	.	Alu	0.363636
10	95691304	A->G	-	ENSG00000119977	TCTN3	protein_coding	Intergenic	.	.	Alu	0.181818
10	96165187	A->G	+	ENSG00000177853	ZNF518A	protein_coding	Intergenic	.	.	Alu	0.3
10	96165198	A->G	+	ENSG00000177853	ZNF518A	protein_coding	Intergenic	.	.	Alu	0.272727
10	96165203	A->G	+	ENSG00000177853	ZNF518A	protein_coding	Intergenic	.	.	Alu	0.181818
10	96165369	A->G	+	ENSG00000177853	ZNF518A	protein_coding	Intergenic	.	.	Alu	0.2
10	96166724	A->G	+	ENSG00000177853	ZNF518A	protein_coding	Intergenic	.	.	Alu	0.461538
10	96166742	A->G	+	ENSG00000177853	ZNF518A	protein_coding	Intergenic	.	.	Alu	0.545455
10	96563130	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.111111
10	96579008	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.166667
10	96839825	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.142857
10	96846028	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.153846
10	96846086	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.214286
10	96846087	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.214286
10	96846466	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.153846
10	96847066	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.272727
10	96847067	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.272727
10	96847185	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.181818
10	97374204	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	97374212	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.521739
10	97374267	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.111111
10	97374306	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.52381
10	97374334	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.133333
10	97374338	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.5
10	97374339	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.5
10	97374340	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	97374380	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97374385	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.363636
10	97375186	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.111111
10	97375330	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.214286
10	97375350	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.307692
10	97375376	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.4
10	97375377	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.266667
10	97376076	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.217391
10	97376097	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97376462	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	97377254	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.142857
10	97378774	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.230769
10	99716131	A->G	+	ENSG00000014919	COX15	protein_coding	Intergenic	.	.	Alu	0.181818
10	99716203	A->G	+	ENSG00000014919	COX15	protein_coding	Intergenic	.	.	Alu	0.384615
10	99716208	A->G	+	ENSG00000014919	COX15	protein_coding	Intergenic	.	.	Alu	0.307692
11	11859926	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
11	11861194	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
11	11887618	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.8
11	13673299	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.461538
11	13683299	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.176471
11	13683314	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.117647
11	13703213	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
11	13703219	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.1875
11	13703258	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
11	14478725	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.0869565
11	14478731	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.318182
11	14516025	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.153846
11	14516085	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.3125
11	14516328	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.3
11	14516329	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.4
11	16756369	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.290323
11	16756370	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.225806
11	16756543	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0666667
11	16756695	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0392157
11	16756732	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0882353
11	16756761	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.235294
11	17076645	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.08
11	17192584	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.3
11	17334630	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	17334631	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0909091
11	17334639	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.1
11	17334648	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.9
11	17334652	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.15
11	17334702	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.130435
11	17334709	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	17334724	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.16
11	17334725	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.12
11	17334726	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	17334727	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.148148
11	17334739	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0740741
11	17334831	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0857143
11	17334852	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.05
11	17334862	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0606061
11	17334866	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0625
11	17335521	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.137931
11	17335533	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.26087
11	17335550	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.703704
11	17335560	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.606061
11	17335576	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0606061
11	17335602	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0645161
11	17335699	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.1875
11	17335702	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.111111
11	17335704	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.473684
11	17335760	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.08
11	17335774	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.28
11	17335783	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.15
11	17336204	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0487805
11	17336217	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0408163
11	17336603	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17336639	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.103448
11	17336958	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	17337668	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0769231
11	17337734	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.05
11	17337760	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0365854
11	17337763	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0348837
11	17337800	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0289855
11	17337809	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0273973
11	17337815	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0441176
11	17337818	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0363636
11	17337912	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0462963
11	17337915	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.0208333
11	18404011	A->G	+	ENSG00000134333	LDHA	protein_coding	Intergenic	.	.	Alu	0.0833333
11	18404244	A->G	+	ENSG00000134333	LDHA	protein_coding	Intergenic	.	.	Alu	0.208333
11	18404343	A->G	+	ENSG00000134333	LDHA	protein_coding	Intergenic	.	.	Alu	0.0740741
11	18406805	A->G	+	ENSG00000134333	LDHA	protein_coding	Intergenic	.	.	Alu	0.0714286
11	18525128	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.181818
11	18614314	A->G	-	ENSG00000179119	SPTY2D1	protein_coding	Intergenic	.	.	Alu	0.153846
11	18632077	A->G	-	ENSG00000179119	SPTY2D1	protein_coding	Intergenic	.	.	Alu	0.0833333
11	18632089	A->G	-	ENSG00000179119	SPTY2D1	protein_coding	Intergenic	.	.	Alu	0.0869565
11	33074672	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.190476
11	33074728	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.142857
11	33074739	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.5
11	33074744	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.142857
11	33074748	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.642857
11	33074770	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.1875
11	33074786	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.2
11	33074883	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.2
11	33075229	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	33075291	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.125
11	33075310	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.307692
11	33075311	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.714286
11	33075391	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.363636
11	33075420	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	33075484	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.0689655
11	33266627	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0571429
11	33266652	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.309524
11	33267223	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	33267252	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	33267576	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.3
11	33267589	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.583333
11	33267678	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	33267681	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	33267683	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	33267970	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.25
11	33268132	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	33268150	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.15
11	33270022	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33270409	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33271412	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1
11	33271419	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	33271458	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.4
11	33271475	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33275139	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33275157	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.3
11	33282129	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33283749	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	33283808	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33285836	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.3
11	33342600	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.384615
11	33342605	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	33342650	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	33342651	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.266667
11	33342695	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	33342729	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.222222
11	33342735	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.4375
11	33342789	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.533333
11	33342820	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.176471
11	33866541	A->G	-	ENSG00000135363	LMO2	protein_coding	Intergenic	.	.	Alu	0.4
11	34061263	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
11	34061270	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.125
11	34061276	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.210526
11	34061287	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.136364
11	34061324	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.115385
11	34061333	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.129032
11	34061391	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
11	34061470	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.157895
11	34061795	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
11	34061806	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.461538
11	34071471	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.181818
11	34071477	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.181818
11	34076792	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
11	34076810	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.285714
11	34076874	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.588235
11	34076880	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.181818
11	34079249	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	34079279	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.130435
11	34079280	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.08
11	34079332	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.178571
11	34079341	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0740741
11	34079355	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.137931
11	34084137	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.272727
11	34084139	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.333333
11	34095009	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.2
11	35187137	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.107143
11	35187887	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.102041
11	35187939	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0769231
11	35187940	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.101266
11	35187943	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.038961
11	35187944	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0769231
11	35187973	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0454545
11	35212453	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.0540541
11	35212863	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.117647
11	35212877	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.35
11	35212924	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.153846
11	35213021	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.181818
11	35213545	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.142857
11	35213553	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.375
11	35213562	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.294118
11	35213577	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.208333
11	35216806	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.220339
11	35218723	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.225806
11	35226802	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.235294
11	36486227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	36486844	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
11	36486904	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
11	36486991	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
11	36487008	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
11	36487009	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
11	43324201	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.2
11	43324232	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.166667
11	43324256	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.333333
11	43424193	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.2
11	43682871	A->G	+	ENSG00000283341	AC068205.2	processed_transcript	Intergenic	.	.	Alu	0.384615
11	43857047	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.1
11	43860257	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.214286
11	43860780	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.230769
11	43860783	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.166667
11	43860827	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.416667
11	43860891	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.153846
11	43866182	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.142857
11	43866236	A->G	+	ENSG00000246250	AC087521.2	antisense	Intergenic	.	.	Alu	0.142857
11	44247526	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
11	44249017	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
11	44249020	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
11	44249815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
11	44249816	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
11	44249839	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
11	44249923	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
11	44249949	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
11	44250033	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
11	45864682	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.25
11	45864980	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.272727
11	46584947	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.3
11	46619589	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.909091
11	46619662	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.166667
11	47168659	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47168697	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47168705	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.117647
11	47168750	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.111111
11	47168787	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47169709	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.117647
11	47169743	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.136364
11	47169774	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.1
11	47170077	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.105263
11	47170145	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47170159	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47481986	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.363636
11	47482011	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.333333
11	47482023	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47482037	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.4
11	47482046	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47516668	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47516729	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47516739	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47521973	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.315789
11	47521978	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.105263
11	47522106	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.4
11	47522468	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47525567	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.461538
11	47533401	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47536283	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47536514	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.230769
11	47543397	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47550217	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47550223	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47550280	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47550365	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.333333
11	47550419	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.444444
11	47550448	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.285714
11	47551935	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47568896	A->G	+	ENSG00000110536	PTPMT1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47741224	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.181818
11	47741262	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47741267	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47741310	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.111111
11	47748499	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47759460	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.181818
11	47761360	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.142857
11	47761373	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.25
11	47762009	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.142857
11	47762193	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.133333
11	47762308	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47762328	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.315789
11	47762353	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.125
11	47763219	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.190476
11	47763281	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.230769
11	47763350	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.25
11	47763772	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.3
11	47763773	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.454545
11	47764306	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.142857
11	47765713	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.153846
11	47765731	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.125
11	57714829	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.125
11	57720501	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.142857
11	57721087	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.117647
11	57721088	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.117647
11	57721120	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.3125
11	60211654	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.105263
11	60211656	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.111111
11	60211669	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.176471
11	60211687	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.357143
11	60211813	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.142857
11	60211830	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.384615
11	60211849	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.230769
11	60211850	A->G	-	ENSG00000214787	MS4A4E	protein_coding	Intergenic	.	.	Alu	0.153846
11	60387786	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.307692
11	60387791	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.272727
11	61364973	A->G	+	ENSG00000149483	TMEM138	protein_coding	Intergenic	.	.	Alu	0.2
11	61413569	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.2
11	61428321	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.272727
11	62738871	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.0833333
11	62738889	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.125
11	62738901	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.0869565
11	62738905	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.12
11	62738913	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.0689655
11	62793190	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.666667
11	62793518	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.357143
11	62802589	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.5
11	62803134	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	62814655	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62814656	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62814680	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.133333
11	62817200	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.117647
11	62819895	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.181818
11	62819903	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.230769
11	62819926	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.153846
11	62821272	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.153846
11	62821277	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.285714
11	62828217	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.111111
11	62828229	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.178571
11	62828274	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.08
11	62828281	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.103448
11	62828289	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0869565
11	62828309	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.307692
11	62828312	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.681818
11	62828377	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.181818
11	62828545	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62828562	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.1875
11	62828626	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.176471
11	62828664	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.238095
11	62828981	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0666667
11	62829001	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0967742
11	62840072	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.153846
11	62886221	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.125
11	62886696	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.181818
11	64198983	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.181818
11	64488843	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	64488872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
11	64488873	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
11	65102118	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.272727
11	65660915	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.181818
11	65660976	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.307692
11	65661195	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.3
11	65661199	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.166667
11	65661200	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.166667
11	65661245	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.3
11	65772803	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
11	65772804	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
11	65772805	A->G	-	.	.	.	Intergenic	.	.	Alu	0.151515
11	65772830	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
11	65772868	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0697674
11	65772880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.219512
11	65772882	A->G	-	.	.	.	Intergenic	.	.	Alu	0.463415
11	65772962	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0294118
11	65772999	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0307692
11	65773638	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	65774483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.02
11	66629893	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.1
11	66629977	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66630420	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66630497	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0869565
11	66630518	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0425532
11	66631239	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66631365	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0869565
11	66631414	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.1875
11	66631454	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.12
11	66631462	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.173913
11	66631493	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66631741	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66631752	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.172414
11	66631764	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66631801	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66631837	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.210526
11	66631908	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.117647
11	66632894	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66633292	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0833333
11	66633330	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.15
11	66633343	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.130435
11	66633344	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.130435
11	66633357	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.333333
11	66633400	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66633403	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0769231
11	66633409	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.08
11	66633466	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66633484	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66633558	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.172414
11	66633563	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.28125
11	66633593	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0625
11	66633627	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.269231
11	66633665	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.210526
11	66633691	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66633692	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66633701	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66633705	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66633718	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.214286
11	66634012	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66634013	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.1875
11	66634042	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66648296	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.117647
11	66648663	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.186047
11	66648667	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.190476
11	66648734	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66648757	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.230769
11	66649172	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66649173	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0833333
11	66649214	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.242424
11	66649224	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66649238	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0769231
11	66649239	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0540541
11	66649424	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66649447	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.137931
11	66649470	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.175
11	66649489	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0512821
11	66650345	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66650424	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66650450	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0952381
11	66650451	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0952381
11	66650492	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.1
11	66654044	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66654051	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66654402	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66654899	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.117647
11	66654902	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.277778
11	66654958	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.176471
11	66654964	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66655517	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.117647
11	66656761	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66658849	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.3
11	66842002	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.272727
11	68085335	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.2
11	68085340	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.2
11	68096278	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.181818
11	68096309	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.2
11	68118341	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.1
11	68118346	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.157895
11	68790168	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.3
11	68832374	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.272727
11	68832381	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.166667
11	71453903	A->G	+	ENSG00000172890	NADSYN1	protein_coding	Intergenic	.	.	Alu	0.181818
11	71453904	A->G	+	ENSG00000172890	NADSYN1	protein_coding	Intergenic	.	.	Alu	0.272727
11	73134880	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.2
11	73872599	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	76365078	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.3
11	77614485	A->G	-	ENSG00000074201	CLNS1A	protein_coding	Intergenic	.	.	Alu	0.4
11	77617285	A->G	-	ENSG00000074201	CLNS1A	protein_coding	Intergenic	.	.	Alu	0.25
11	78331491	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.384615
11	78331518	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.214286
11	78351105	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.571429
11	78388534	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.08
11	78390368	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.153846
11	78390383	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.181818
11	78390467	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.269231
11	78390473	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.296296
11	78390477	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.16
11	78390542	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.333333
11	78391996	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.0740741
11	78414006	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.105263
11	83172663	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.181818
11	83172668	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.2
11	83175634	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.2
11	85954755	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
11	85954756	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	85954792	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	85971479	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.181818
11	85971624	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.636364
11	85971879	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.25
11	85971958	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.357143
11	85971959	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.285714
11	85971984	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.272727
11	86046881	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.153846
11	86054874	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.125
11	86055230	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.166667
11	93790921	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.0740741
11	93791049	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	93799276	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.142857
11	93799315	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.111111
11	93799318	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.235294
11	93799655	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.2
11	93799696	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.470588
12	10216161	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.133333
12	10715463	A->G	-	ENSG00000060138	YBX3	protein_coding	Intergenic	.	.	Alu	0.121212
12	10715464	A->G	-	ENSG00000060138	YBX3	protein_coding	Intergenic	.	.	Alu	0.0625
12	11658255	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.142857
12	11658259	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0909091
12	11658305	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.210526
12	11658336	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.111111
12	11658455	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0869565
12	11661090	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.105263
12	11661119	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11661123	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.105263
12	11661228	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.1
12	11690639	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.181818
12	11703056	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0869565
12	11703057	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.0869565
12	11704398	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.3
12	11704416	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.363636
12	11704499	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.125
12	11704544	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.230769
12	11704561	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.181818
12	11717920	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.333333
12	11784836	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11784839	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.2
12	11823531	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.642857
12	19443226	A->G	+	ENSG00000139154	AEBP2	protein_coding	Intergenic	.	.	Alu	0.166667
12	19443227	A->G	+	ENSG00000139154	AEBP2	protein_coding	Intergenic	.	.	Alu	0.333333
12	19443236	A->G	+	ENSG00000139154	AEBP2	protein_coding	Intergenic	.	.	Alu	0.125
12	19443662	A->G	+	ENSG00000139154	AEBP2	protein_coding	Intergenic	.	.	Alu	0.25
12	25060882	A->G	+	ENSG00000118308	LRMP	protein_coding	Intergenic	.	.	Alu	0.181818
12	25061275	A->G	+	ENSG00000118308	LRMP	protein_coding	Intergenic	.	.	Alu	0.454545
12	25081945	A->G	+	ENSG00000118308	LRMP	protein_coding	Intergenic	.	.	Alu	0.133333
12	25081959	A->G	+	ENSG00000118308	LRMP	protein_coding	Intergenic	.	.	Alu	0.4
12	25082520	A->G	+	ENSG00000118308	LRMP	protein_coding	Intergenic	.	.	Alu	0.214286
12	25248226	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.181818
12	27034965	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.142857
12	27035125	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.133333
12	31296254	A->G	-	ENSG00000139146	SINHCAF	protein_coding	Intergenic	.	.	Alu	0.166667
12	31296326	A->G	-	ENSG00000139146	SINHCAF	protein_coding	Intergenic	.	.	Alu	0.166667
12	31965090	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.333333
12	31965096	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.214286
12	31994326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
12	31996587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
12	31996621	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
12	31996657	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31996866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
12	31997254	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
12	31997916	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31998291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31998442	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
12	31998479	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
12	31998569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.533333
12	31998599	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31998605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
12	31998611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
12	31998615	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
12	31999769	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
12	31999770	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
12	31999774	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31999787	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
12	32714804	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.272727
12	32714805	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.181818
12	42352701	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.230769
12	42360552	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.153846
12	42360621	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.2
12	42360624	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.1875
12	42360660	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42360723	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.190476
12	42360754	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.125
12	42360755	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.125
12	42542567	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.153846
12	42542612	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42562100	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42562106	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.230769
12	42562137	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.125
12	42562141	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.375
12	42562160	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.272727
12	42563147	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.3
12	42563456	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.153846
12	42567711	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.117647
12	42567744	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.133333
12	42568351	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.125
12	42568355	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.125
12	42568358	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.1875
12	42568372	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.133333
12	42568384	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.3125
12	42568403	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.272727
12	42570720	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.181818
12	42575658	A->G	-	ENSG00000139174	PRICKLE1	protein_coding	Intergenic	.	.	Alu	0.166667
12	43800915	A->G	-	ENSG00000151239	TWF1	protein_coding	Intergenic	.	.	Alu	0.142857
12	45765287	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.153846
12	48657685	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.214286
12	48657732	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.266667
12	48657765	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.111111
12	48657810	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.230769
12	48665526	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	48665555	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.2
12	48665560	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	48665562	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	48665962	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.142857
12	48666130	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.111111
12	48676283	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.416667
12	48676284	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	48676285	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	48676574	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	48934755	A->G	-	ENSG00000272822	AC073610.3	protein_coding	Intergenic	.	.	Alu	0.142857
12	48934757	A->G	-	ENSG00000272822	AC073610.3	protein_coding	Intergenic	.	.	Alu	0.285714
12	48934763	A->G	-	ENSG00000272822	AC073610.3	protein_coding	Intergenic	.	.	Alu	0.307692
12	48934769	A->G	-	ENSG00000272822	AC073610.3	protein_coding	Intergenic	.	.	Alu	0.166667
12	48934797	A->G	-	ENSG00000272822	AC073610.3	protein_coding	Intergenic	.	.	Alu	0.1875
12	48934929	A->G	-	ENSG00000272822	AC073610.3	protein_coding	Intergenic	.	.	Alu	0.181818
12	49268228	A->G	+	ENSG00000167553	TUBA1C	protein_coding	Intergenic	.	.	Alu	0.153846
12	53023041	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.1875
12	53023069	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.266667
12	53028434	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.230769
12	53028476	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.3
12	53029636	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.2
12	53469466	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.153846
12	53469842	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.1875
12	53470135	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.125
12	53470257	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	53470258	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.45
12	53470270	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.142857
12	53470505	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.4
12	53470507	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.214286
12	54288528	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.2
12	54288534	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.166667
12	54289587	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.7
12	54289823	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.111111
12	54289833	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.157895
12	54289844	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.210526
12	54289886	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.666667
12	54289912	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.181818
12	54289947	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.2
12	54289964	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.461538
12	54290378	A->G	-	ENSG00000258344	AC078778.2	sense_overlapping	Intergenic	.	.	Alu	0.142857
12	55731617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
12	55782679	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.545455
12	55782684	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.3
12	55785713	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55785716	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.333333
12	55787056	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.125
12	55787108	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	55787110	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55810237	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55810332	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.4
12	55810350	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.2
12	55810540	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55810549	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	55810550	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.272727
12	55810567	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.2
12	55922541	A->G	-	ENSG00000170473	PYM1	protein_coding	Intergenic	.	.	Alu	0.2
12	56284816	A->G	-	ENSG00000062485	CS	protein_coding	Intergenic	.	.	Alu	0.181818
12	56285030	A->G	-	ENSG00000062485	CS	protein_coding	Intergenic	.	.	Alu	0.181818
12	56297559	A->G	-	ENSG00000062485	CS	protein_coding	Intergenic	.	.	Alu	0.181818
12	56682414	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.111111
12	56685098	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.153846
12	56730547	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0833333
12	56730643	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.0555556
12	56730718	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.583333
12	56730770	A->G	-	ENSG00000196531	NACA	protein_coding	Intergenic	.	.	Alu	0.222222
12	57398143	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	57398159	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.7
12	62282267	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.133333
12	62476889	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.2
12	62477027	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.153846
12	62574451	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.142857
12	62574476	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.2
12	62574489	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.166667
12	63587749	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.181818
12	63587751	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.363636
12	63587800	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.133333
12	63590042	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.166667
12	63590045	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.285714
12	63590046	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.142857
12	63590081	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.636364
12	63590082	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.181818
12	63590084	A->G	-	ENSG00000177990	DPY19L2	protein_coding	Intergenic	.	.	Alu	0.130435
12	64407221	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.230769
12	64407223	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.307692
12	64408857	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.25
12	64408876	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.142857
12	64421890	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.153846
12	64421913	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.142857
12	65287390	A->G	+	ENSG00000174099	MSRB3	protein_coding	Intergenic	.	.	Alu	0.181818
12	66166208	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.153846
12	66193959	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0588235
12	66194142	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.111111
12	67283322	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.2
12	67283355	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.2
12	67290450	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.2
12	68615437	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.25
12	68615438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1
12	68615452	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68615469	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68615539	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.107143
12	68616038	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.047619
12	68616354	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0333333
12	68616385	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0434783
12	68616516	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0714286
12	68617795	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.137931
12	68617828	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0512821
12	68619025	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0727273
12	68620680	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0540541
12	68622963	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.130435
12	68627850	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68629050	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0714286
12	68629056	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.115385
12	68629178	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.08
12	68638760	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68638761	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68638800	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68638842	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.363636
12	68638845	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68638896	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68646425	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68646435	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.222222
12	68817530	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.3
12	68817655	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.416667
12	68817897	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.363636
12	68817898	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.363636
12	68817927	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.352941
12	68817937	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.111111
12	68817979	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.176471
12	68817991	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.388889
12	68817994	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.111111
12	68818023	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.142857
12	68818032	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.478261
12	68818033	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.227273
12	68821148	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.391304
12	68821152	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68821177	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.117647
12	68821213	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.4
12	68821245	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.25
12	68821306	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.142857
12	68821308	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68821445	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.333333
12	68821468	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	68821656	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.125
12	68821956	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.157895
12	68821980	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.444444
12	68821981	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68822020	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	68822042	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.181818
12	69244036	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.111111
12	69244335	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.0512821
12	69245876	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.0588235
12	69246007	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.15
12	69246042	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.133333
12	69255187	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.583333
12	69256052	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.307692
12	69256102	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.454545
12	69256139	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.148148
12	71616102	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.5
12	71657744	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0869565
12	71657745	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0869565
12	71657771	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.111111
12	71657786	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.133333
12	71657823	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.1875
12	71657867	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.12
12	71657906	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.136364
12	71657907	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	71661181	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.2
12	71847536	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.111111
12	76079902	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.125
12	76549508	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0512821
12	76556694	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0681818
12	76556756	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.147059
12	76556760	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.257143
12	76556764	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.181818
12	76556801	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0857143
12	76556802	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0645161
12	76556815	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0833333
12	76557372	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.08
12	76557397	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76557449	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.583333
12	76557503	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76557532	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.428571
12	79923961	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.0952381
12	79924013	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.105263
12	79924521	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.111111
12	79924553	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.125
12	79924611	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.153846
12	79926952	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.2
12	79926967	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.2
12	79926979	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.333333
12	89642769	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.166667
12	89642783	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.181818
12	89642784	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.181818
12	89643917	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.153846
12	89643939	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.105263
12	89643956	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.133333
12	89644029	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.266667
12	92090528	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.2
12	92098454	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.3
12	92098484	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.4
12	92105078	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.133333
12	92105109	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.2
12	92109732	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.166667
12	92128052	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.166667
12	92129237	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.105263
12	92129363	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0625
12	93382048	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.333333
12	93382757	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.2
12	93382827	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.230769
12	93382860	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.25
12	93382868	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.636364
12	93384333	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.181818
12	93384349	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.2
12	93386055	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.1875
12	93386069	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.473684
12	93386105	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.5
12	93386115	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.538462
12	93386121	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.1875
12	93386160	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.727273
12	93386377	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.133333
12	93386393	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.125
12	93386453	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.125
12	93386460	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.357143
12	93386501	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.642857
12	93386505	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.538462
12	93390636	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.2
12	93390679	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.25
12	93390790	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.307692
12	93391237	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.105263
12	93391266	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.117647
12	93391388	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.153846
12	93391480	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.214286
12	93393350	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.142857
12	93397664	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.133333
12	93397699	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.2
12	93398179	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.272727
12	93398184	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.181818
12	93429126	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.181818
12	93429138	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.105263
12	93436303	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.166667
12	93436376	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.125
12	93437045	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.125
12	93437046	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.117647
12	93437579	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0689655
12	93437580	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0666667
12	93437634	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0869565
12	93437672	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.117647
12	95230030	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.2
12	95230511	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.25
12	95245928	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.142857
12	95481272	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.363636
12	95481274	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.454545
12	95481304	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.235294
12	95481339	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.111111
12	95482238	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.3125
12	95482241	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.285714
12	95482261	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.416667
12	96357218	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96357219	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96386431	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.230769
12	96389954	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96391027	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.333333
12	96391035	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.384615
12	96391040	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.25
12	96395102	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.333333
12	96395146	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.166667
12	96395147	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.166667
12	98524413	A->G	+	ENSG00000120802	TMPO	protein_coding	Intergenic	.	.	Alu	0.166667
12	98524425	A->G	+	ENSG00000120802	TMPO	protein_coding	Intergenic	.	.	Alu	0.3
12	98596863	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0689655
13	19710875	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.133333
13	19710940	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.391304
13	19710958	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.125
13	19711551	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.363636
13	19711552	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.25
13	19744009	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.133333
13	19756702	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.2
13	19757078	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.2
13	19848203	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.166667
13	19851061	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.1
13	19851087	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.111111
13	19964297	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.166667
13	19964485	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.4375
13	19964499	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.117647
13	19964500	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.411765
13	19964504	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.235294
13	19973151	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.117647
13	20835087	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.272727
13	20839155	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.307692
13	20839201	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.272727
13	20893670	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.181818
13	20897999	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.142857
13	20998277	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.181818
13	21003630	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.181818
13	21020914	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.25
13	21020937	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.285714
13	21031648	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.1
13	21031667	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.125
13	21041244	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.4
13	21041245	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.3
13	21041251	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.4
13	21042508	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.125
13	21042799	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.153846
13	21044821	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.142857
13	21044955	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.0909091
13	21052393	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.111111
13	21052560	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.105263
13	21141731	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.15
13	21141767	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.0952381
13	21145699	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.0769231
13	21145700	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.08
13	21145753	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.0882353
13	21145758	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.0645161
13	21145795	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.0909091
13	21145811	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.166667
13	21400808	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.2
13	21400822	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.181818
13	21451953	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.142857
13	21451955	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.0952381
13	21453952	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.142857
13	21454163	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.285714
13	21454243	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.210526
13	21454244	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.111111
13	24508620	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
13	24508674	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
13	24508696	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
13	24508747	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
13	24508751	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
13	24509923	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.130435
13	24509937	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0869565
13	24509942	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.130435
13	25314434	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.333333
13	25314486	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.375
13	25314495	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.125
13	25314512	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.105263
13	27254669	A->G	+	ENSG00000122026	RPL21	protein_coding	Intergenic	.	.	Alu	0.0285714
13	27256879	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
13	27257773	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
13	27651832	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.214286
13	27652669	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.25
13	27652671	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.272727
13	27652705	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.157895
13	27652759	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.142857
13	27652763	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.416667
13	27652806	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.4
13	27653038	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.4
13	27653083	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.375
13	27653140	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.105263
13	27653161	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.210526
13	27653588	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.333333
13	27999442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
13	27999448	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
13	27999673	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
13	27999676	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
13	28000229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
13	28002967	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
13	28002979	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
13	28002989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
13	28003100	A->G	-	.	.	.	Intergenic	.	.	Alu	0.538462
13	28005267	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.3
13	28007349	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.636364
13	28007446	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28007484	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28014186	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28020472	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28020565	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.0769231
13	28020566	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.12
13	28021172	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28021281	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.3
13	28028588	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28028658	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28028854	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28029006	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.157895
13	28046724	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.259259
13	28046728	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.12
13	28046734	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.75
13	28046742	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.5
13	28046791	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.6875
13	28046792	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.3125
13	28046855	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28047539	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.15
13	28047554	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.0869565
13	28047593	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.178571
13	28047600	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.833333
13	28047603	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.37931
13	28047629	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.0625
13	28047636	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28047665	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.470588
13	28047674	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28096110	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28096134	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28096227	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.1
13	28096254	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28096259	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28096574	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28096630	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28097133	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.2
13	28140070	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28140077	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1
13	28140129	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.08
13	28140170	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0434783
13	28141568	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0555556
13	28141607	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1
13	28141689	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0454545
13	28145356	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28145466	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0689655
13	28145491	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0689655
13	28145595	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.05
13	28145896	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28145900	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.227273
13	28145939	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28149093	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28149130	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28149173	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28149190	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.225806
13	28149193	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0625
13	28149195	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0588235
13	28149196	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0625
13	28149233	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.09375
13	28149667	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.08
13	28149716	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.28
13	28149733	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28149749	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.285714
13	28149789	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1875
13	28149790	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28151427	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28151460	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28151490	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28152329	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28152346	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.368421
13	28154595	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.272727
13	28154656	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1875
13	28154676	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.285714
13	28154701	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28155380	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28155414	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28155429	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28156783	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28160071	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28160125	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28160142	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28160216	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28186976	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.176471
13	28186986	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28187065	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28187071	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1
13	28187072	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1
13	28187107	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28187150	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1875
13	28187176	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28187860	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28187891	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28189441	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.384615
13	28189526	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28189966	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28190000	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28190007	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.636364
13	28190008	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.5
13	28190044	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28194545	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1875
13	28194585	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28194607	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.277778
13	28194609	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28194650	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28194653	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28194667	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28194738	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.5
13	28194744	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28195146	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.461538
13	28195282	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28195323	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.153846
13	28195389	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28195636	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0869565
13	28195653	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28195665	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1875
13	28198096	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28203018	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28251941	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28251962	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28272370	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28272830	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28272831	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	32525622	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.3125
13	32525623	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.5
13	32525638	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.65
13	32525667	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.117647
13	36347343	A->G	+	ENSG00000120664	SPART-AS1	antisense	Intergenic	.	.	Alu	0.2
13	36347487	A->G	+	ENSG00000120664	SPART-AS1	antisense	Intergenic	.	.	Alu	0.153846
13	36347488	A->G	+	ENSG00000120664	SPART-AS1	antisense	Intergenic	.	.	Alu	0.333333
13	36348058	A->G	+	ENSG00000120664	SPART-AS1	antisense	Intergenic	.	.	Alu	0.230769
13	36348071	A->G	+	ENSG00000120664	SPART-AS1	antisense	Intergenic	.	.	Alu	0.142857
13	36348139	A->G	+	ENSG00000120664	SPART-AS1	antisense	Intergenic	.	.	Alu	0.2
13	36348165	A->G	+	ENSG00000120664	SPART-AS1	antisense	Intergenic	.	.	Alu	0.333333
13	40937664	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.133333
13	40937954	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.08
13	40938083	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.214286
13	40946879	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.105263
13	40951853	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40953100	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.16
13	40978269	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0740741
13	40987499	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.3
13	40991527	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40991528	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40998095	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1875
13	40998111	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.176471
13	40998139	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40998899	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0909091
13	40998900	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.130435
13	41001344	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.272727
13	41009007	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.125
13	41009008	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0606061
13	41009965	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.277778
13	41011478	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	41011546	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0512821
13	41011552	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.05
13	41011582	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.103448
13	41011591	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	41011609	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0512821
13	41011623	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0444444
13	41011637	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.05
13	41011650	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0363636
13	41011695	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0754717
13	41012072	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.176471
13	41012077	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.115385
13	41012085	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0526316
13	41012089	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.047619
13	41012196	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
13	41012201	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.157895
13	41053294	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.08
13	41058890	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
13	46135254	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.631579
13	48239439	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0930233
13	48239449	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0666667
13	48239453	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.125
13	48239485	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0869565
13	48240257	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0666667
13	48240332	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.129032
13	48240345	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0645161
13	48240347	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.137931
13	48240351	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.12
13	49994981	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	1
13	50113399	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.272727
13	50113833	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.333333
13	50117352	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.4
13	51631285	A->G	+	ENSG00000139668	WDFY2	protein_coding	Intergenic	.	.	Alu	0.692308
13	52629834	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.117647
13	52629848	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.352941
13	52629910	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.153846
13	52629994	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.2
13	52630455	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.111111
13	52630464	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.176471
13	52630532	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.2
13	52630545	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.214286
13	71616619	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.363636
13	71616620	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.363636
13	71616652	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.214286
13	71616683	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	71723346	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	71723357	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	71764314	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.363636
13	71791577	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.153846
13	71804101	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.166667
13	71809261	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.1
13	71809272	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.0909091
13	71818077	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.272727
13	71818080	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	71821828	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.4
13	71822051	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.272727
13	71822056	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.25
13	71842353	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.133333
13	71842383	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	71842509	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.181818
13	71843425	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.25
13	71843444	A->G	-	ENSG00000276644	DACH1	protein_coding	Intergenic	.	.	Alu	0.142857
13	72779186	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.2
13	72779188	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.214286
13	72779194	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.454545
13	72779206	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.2
13	72779248	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.181818
13	72779268	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.4
13	72779284	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	72779314	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.12
13	72780214	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.0952381
13	72780243	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.176471
13	72780269	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.1
13	79395477	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.2
13	95710706	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.1875
13	95710710	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.25
13	95711314	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.133333
13	95711322	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.111111
13	95711377	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.176471
13	95715653	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.214286
13	95715685	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.142857
13	95716078	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.142857
13	95716103	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.117647
13	95750609	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.2
13	97979788	A->G	+	ENSG00000065150	IPO5	protein_coding	Intergenic	.	.	Alu	0.307692
13	97979800	A->G	+	ENSG00000065150	IPO5	protein_coding	Intergenic	.	.	Alu	0.166667
13	97985881	A->G	+	ENSG00000065150	IPO5	protein_coding	Intergenic	.	.	Alu	0.5
13	97985993	A->G	+	ENSG00000065150	IPO5	protein_coding	Intergenic	.	.	Alu	0.25
13	98568175	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.2
13	98568176	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.3
14	20478130	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
14	20478131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
14	20478149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
14	20478184	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
14	20478206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
14	20478216	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
14	20478219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
14	20478238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
14	20478272	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
14	20478285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.146341
14	20478301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.225
14	20478315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
14	20480336	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0857143
14	20480337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
14	20480405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
14	20480406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
14	20480502	A->G	+	.	.	.	Intergenic	.	.	Alu	0.113208
14	20480856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
14	20480946	A->G	+	.	.	.	Intergenic	.	.	Alu	0.147059
14	20480963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
14	20481007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	20481047	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
14	21245917	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1875
14	21245990	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.181818
14	21246047	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.214286
14	21246370	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.3
14	21252419	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.136364
14	21252448	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21252585	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.272727
14	21252586	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21253074	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.117647
14	21256743	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0444444
14	21256747	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0434783
14	21256752	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0454545
14	21256940	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.125
14	21257723	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0689655
14	21261071	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.12
14	21265566	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0689655
14	21265737	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.179487
14	21265756	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0952381
14	21265764	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.275862
14	21266199	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.277778
14	21266328	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.230769
14	21480956	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.357143
14	21481025	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.272727
14	21481259	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.222222
14	23032384	A->G	-	ENSG00000100804	PSMB5	protein_coding	Intergenic	.	.	Alu	0.3
14	23032392	A->G	-	ENSG00000100804	PSMB5	protein_coding	Intergenic	.	.	Alu	0.4
14	23091104	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.2
14	23091369	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.133333
14	23091407	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.125
14	23091513	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.272727
14	23091819	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.210526
14	23091820	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.105263
14	31017039	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.2
14	31137658	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.181818
14	31157744	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.166667
14	31196086	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.4
14	34457160	A->G	-	ENSG00000165389	SPTSSA	protein_coding	Intergenic	.	.	Alu	0.181818
14	34532241	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.117647
14	34532347	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.2
14	34787669	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.2
14	34787670	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.2
14	34791000	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.272727
14	34855778	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.166667
14	34872352	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.0769231
14	39178473	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.0545455
14	39183805	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0555556
14	39183896	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
14	39184769	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
14	39184805	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
14	39184842	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0512821
14	39184852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
14	39185027	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
14	39188984	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
14	39189610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
14	39427938	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.125
14	44943891	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.181818
14	44965987	A->G	+	ENSG00000198718	TOGARAM1	protein_coding	Intergenic	.	.	Alu	0.266667
14	44965992	A->G	+	ENSG00000198718	TOGARAM1	protein_coding	Intergenic	.	.	Alu	0.25
14	44966058	A->G	+	ENSG00000198718	TOGARAM1	protein_coding	Intergenic	.	.	Alu	0.25
14	44966064	A->G	+	ENSG00000198718	TOGARAM1	protein_coding	Intergenic	.	.	Alu	0.230769
14	44966072	A->G	+	ENSG00000198718	TOGARAM1	protein_coding	Intergenic	.	.	Alu	0.166667
14	44966075	A->G	+	ENSG00000198718	TOGARAM1	protein_coding	Intergenic	.	.	Alu	0.166667
14	45206504	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.3
14	45207459	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.214286
14	45207529	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.25
14	45207565	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.153846
14	45217396	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.125
14	45217422	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.153846
14	45229418	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.272727
14	45240140	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.3125
14	45240167	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.25
14	45240502	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.357143
14	45240539	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.461538
14	45240540	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.285714
14	45247643	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.307692
14	45249265	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.142857
14	45249795	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.133333
14	49584256	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.111111
14	49584258	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.0357143
14	49584664	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.05
14	49584736	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.137931
14	49817357	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.214286
14	49819641	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.166667
14	50114741	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.166667
14	50193883	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50193885	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50198999	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.166667
14	50199070	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.117647
14	50199071	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.111111
14	50216165	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.3
14	50216315	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.125
14	50216316	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.125
14	50216683	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.25
14	50224682	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.181818
14	50461242	A->G	-	ENSG00000012983	MAP4K5	protein_coding	Intergenic	.	.	Alu	0.2
14	52712674	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.0909091
14	52712692	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.545455
14	52712817	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.652174
14	52712826	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.0689655
14	52712879	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.222222
14	52712892	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.238095
14	52712977	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.545455
14	52713031	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.25
14	52713069	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.230769
14	52713071	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.307692
14	52713072	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.153846
14	52717881	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.181818
14	55055810	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0714286
14	55056574	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0731707
14	55056639	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0689655
14	55057705	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.111111
14	55057892	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0769231
14	55061070	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.136364
14	55281199	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.08
14	55281206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.08
14	55284099	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55284132	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.545455
14	55284294	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55284299	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55284356	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55284358	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55284361	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55284691	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.210526
14	55284777	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.333333
14	55284790	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.1875
14	55284825	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.105263
14	55284855	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0909091
14	55289605	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0952381
14	55289635	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0740741
14	55289673	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0689655
14	55289677	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0714286
14	55289757	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55289762	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.117647
14	55290137	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.117647
14	55290263	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55290298	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0952381
14	55290881	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55290884	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55290889	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.333333
14	55290920	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55290949	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.363636
14	55291008	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55291715	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0769231
14	55291716	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55291780	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.318182
14	55291886	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.16
14	55291891	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55291905	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.130435
14	55291907	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55292453	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.115385
14	55292499	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55292501	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55293344	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55294382	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.214286
14	55294406	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.294118
14	55294462	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.0909091
14	55301181	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.25
14	55393606	A->G	-	ENSG00000126775	ATG14	protein_coding	Intergenic	.	.	Alu	0.2
14	55584397	A->G	+	ENSG00000126777	KTN1	protein_coding	Intergenic	.	.	Alu	0.333333
14	58249027	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.214286
14	58249030	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.153846
14	58249040	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.4
14	58249046	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.375
14	58255959	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intergenic	.	.	Alu	0.153846
14	58278050	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.2
14	58278060	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.133333
14	58278096	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.166667
14	58289877	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.272727
14	58290845	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.8
14	58290850	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.272727
14	58291502	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.117647
14	58309174	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.0714286
14	58314559	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.294118
14	58314565	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.25
14	58314568	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.176471
14	58314697	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.428571
14	58314869	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.230769
14	58314924	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.115385
14	58314932	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.103448
14	58314933	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.0689655
14	58315004	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.15
14	58316644	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.142857
14	60099914	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.2
14	60100373	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.25
14	60100376	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.181818
14	60100392	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.272727
14	60100398	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.181818
14	60100399	A->G	+	ENSG00000126773	PCNX4	protein_coding	Intergenic	.	.	Alu	0.333333
14	60275733	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.181818
14	61710988	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.2
14	61769659	A->G	+	ENSG00000023608	SNAPC1	protein_coding	Intergenic	.	.	Alu	0.2
14	64519248	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.157895
14	71175311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
14	73070187	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.166667
14	73080430	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
14	73082480	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.166667
14	73086317	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.125
14	73086331	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.133333
14	73086349	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.133333
14	73086350	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
14	73086370	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.142857
14	73091360	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.45
14	73091466	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.176471
14	73098339	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.08
14	73098340	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.36
14	73098407	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.190476
14	73143758	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.25
14	73737987	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.142857
14	73751123	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.142857
14	73889871	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.2
14	73890799	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.272727
14	73890881	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.2
14	73903697	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.2
14	74088352	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.125
14	74088353	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.125
14	74088359	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.125
14	74093752	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.2
14	74895032	A->G	+	ENSG00000119689	DLST	protein_coding	Intergenic	.	.	Alu	0.416667
14	77525225	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.133333
14	77534034	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.166667
14	77534046	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.333333
14	77534072	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.133333
14	77534144	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.272727
14	77535065	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.181818
14	77535066	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.181818
14	77539565	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.125
14	77539952	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.3
14	77539953	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.0952381
14	77540029	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.142857
14	77540034	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.1875
14	77540084	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.105263
14	77540120	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.357143
14	77540577	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.363636
14	77540674	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.176471
14	77540702	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.133333
14	77541126	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.3
14	77551150	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.153846
14	77553609	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.2
14	77553877	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.142857
14	77553961	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.461538
14	77553982	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.272727
14	88574956	A->G	+	ENSG00000100722	ZC3H14	protein_coding	Intergenic	.	.	Alu	0.363636
14	88575147	A->G	+	ENSG00000100722	ZC3H14	protein_coding	Intergenic	.	.	Alu	0.133333
14	88575172	A->G	+	ENSG00000100722	ZC3H14	protein_coding	Intergenic	.	.	Alu	0.133333
14	90995835	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.181818
14	91050257	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.153846
14	91050265	A->G	-	ENSG00000100784	RPS6KA5	protein_coding	Intergenic	.	.	Alu	0.538462
14	91479147	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.333333
14	91481248	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91500920	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.166667
14	91502350	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.166667
14	91502374	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.3
14	91502417	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.266667
14	91503098	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.1875
14	91505331	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.214286
14	91506653	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0769231
14	91506738	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.121212
14	91506743	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0625
14	91506825	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.171429
14	91507068	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0714286
14	91507156	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.075
14	91507235	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0740741
14	91507282	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.190476
14	92173188	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
14	92661470	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.5
14	92661471	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.5
14	92662985	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92662995	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.25
14	92663011	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.230769
14	93321336	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.105263
14	93322318	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.357143
14	93323007	A->G	-	ENSG00000011114	BTBD7	protein_coding	Intergenic	.	.	Alu	0.181818
15	22843227	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.142857
15	22843241	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.285714
15	22843263	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.133333
15	24964516	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.2
15	25429631	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.133333
15	25429770	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.133333
15	25429801	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.133333
15	25429802	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.357143
15	25433353	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.117647
15	25433943	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.526316
15	25433945	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.1
15	25433948	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.318182
15	25434010	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.125
15	25436668	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.454545
15	25437321	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.190476
15	25437369	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.375
15	25437385	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.285714
15	25437415	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.15
15	25437479	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.2
15	31354450	A->G	+	ENSG00000169926	KLF13	protein_coding	Intergenic	.	.	Alu	0.2
15	34100258	A->G	-	ENSG00000134153	EMC7	protein_coding	Intergenic	.	.	Alu	0.153846
15	34100259	A->G	-	ENSG00000134153	EMC7	protein_coding	Intergenic	.	.	Alu	0.142857
15	34143230	A->G	-	ENSG00000134152	KATNBL1	protein_coding	Intergenic	.	.	Alu	0.214286
15	34143249	A->G	-	ENSG00000134152	KATNBL1	protein_coding	Intergenic	.	.	Alu	0.25
15	41088228	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.117647
15	41110717	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.3
15	41240982	A->G	+	ENSG00000187446	CHP1	protein_coding	Intergenic	.	.	Alu	0.5
15	41297673	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
15	41297745	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.75
15	41297752	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.117647
15	41297832	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.166667
15	41297835	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.210526
15	41297852	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.105263
15	41430637	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.272727
15	41439926	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.111111
15	41442307	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.2
15	42259251	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.307692
15	42259287	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.142857
15	43749569	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.142857
15	43749628	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.263158
15	43749632	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.0869565
15	43749635	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.0833333
15	43757783	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.3
15	43763284	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.461538
15	43765282	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.166667
15	43765283	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.166667
15	43765296	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.181818
15	44505230	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.4
15	44505319	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.4
15	44506635	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.4
15	44509257	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.3
15	44509302	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.4
15	44553149	A->G	+	ENSG00000104131	EIF3J	protein_coding	Intergenic	.	.	Alu	0.3
15	44583382	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.363636
15	44583406	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.363636
15	44601052	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.2
15	44601069	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.3
15	44601092	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.363636
15	45596704	A->G	+	ENSG00000104164	BLOC1S6	protein_coding	Intergenic	.	.	Alu	0.142857
15	49033791	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.25
15	49891402	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.230769
15	49891431	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	49891525	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.4
15	49891529	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	49891530	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.3
15	49891598	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.136364
15	49891859	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.1875
15	49891870	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.129032
15	49891926	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.913043
15	49891931	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	49891934	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.294118
15	49891942	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.6
15	49891948	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.142857
15	49892040	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.181818
15	49892053	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.181818
15	49912925	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0833333
15	49954463	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.357143
15	49960100	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.315789
15	49960124	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.4
15	49960125	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.1875
15	49960166	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.6
15	49961086	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.5
15	50000054	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.097561
15	50000172	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.454545
15	50034367	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.05
15	50062261	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.139535
15	50062312	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0882353
15	50062448	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	1
15	50064761	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0681818
15	50064781	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0909091
15	50064789	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.097561
15	50064881	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.163636
15	50064882	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.107143
15	50064991	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.235294
15	50064994	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0740741
15	50065005	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.0612245
15	50065032	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.111111
15	50080705	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	50080706	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	50080857	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.166667
15	50080932	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	50095672	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.08
15	50099436	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.214286
15	50099527	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.2
15	50099794	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.266667
15	50099795	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.285714
15	50099873	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.230769
15	50099926	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.142857
15	50099952	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.263158
15	50099959	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.222222
15	50116085	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.107143
15	50116088	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.178571
15	50345546	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.238095
15	50345554	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.210526
15	50347838	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.0606061
15	50348477	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.272727
15	50348650	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.166667
15	50348693	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50348818	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.157895
15	50348828	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.130435
15	50348847	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.466667
15	51835518	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.181818
15	51926607	A->G	+	ENSG00000259556	AC090971.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
15	52022360	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.125
15	52031630	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.142857
15	52034115	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.166667
15	52037095	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.117647
15	52037115	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.125
15	52048496	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.230769
15	52048497	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.153846
15	52562581	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.111111
15	55258895	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.166667
15	55259091	A->G	-	ENSG00000069974	RAB27A	protein_coding	Intergenic	.	.	Alu	0.272727
15	55388164	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.181818
15	58919026	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	58919039	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.25
15	58919050	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58919146	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	58919377	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.214286
15	58921968	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.153846
15	58922204	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.181818
15	58922210	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.25
15	58922333	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58922760	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.111111
15	58922880	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.235294
15	58922886	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.315789
15	58922895	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.117647
15	58922988	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.4
15	58923161	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.314286
15	58923164	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.0882353
15	58923263	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.107143
15	58923324	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.25
15	58925565	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.0769231
15	58929336	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	58929365	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.111111
15	58929366	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.105263
15	58930662	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.0952381
15	58991272	A->G	+	ENSG00000157450	RNF111	protein_coding	Intergenic	.	.	Alu	0.166667
15	58991277	A->G	+	ENSG00000157450	RNF111	protein_coding	Intergenic	.	.	Alu	0.181818
15	59671920	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.454545
15	59671967	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0909091
15	59671993	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.125
15	59672029	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.142857
15	59672062	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.0909091
15	59672345	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.2
15	59672356	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.416667
15	59672371	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.1875
15	59673309	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.2
15	59673315	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.363636
15	59673828	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.166667
15	59673897	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.2
15	59680465	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.105263
15	59682084	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.166667
15	59682085	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.166667
15	59682142	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.181818
15	59686851	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.097561
15	59686895	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.0363636
15	63126356	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.153846
15	63128365	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63128441	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.133333
15	63546830	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.105263
15	63805856	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.153846
15	63805867	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.25
15	63808426	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.363636
15	64358692	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.105263
15	64358704	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	64358705	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.411765
15	64358706	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64358723	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64358732	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.307692
15	64359651	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64359861	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	64359865	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	64359948	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64359955	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.583333
15	64360769	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.3
15	64360782	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.363636
15	64360819	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.214286
15	64360835	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64360860	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64360874	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64360876	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.363636
15	64360880	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64361547	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64361951	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0740741
15	64361969	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	64361970	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.238095
15	64361979	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	64361984	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.347826
15	64361988	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	64361997	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.25
15	64362064	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64362065	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.428571
15	64362070	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.25
15	64362085	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.210526
15	64362089	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.111111
15	64362091	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64362101	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.266667
15	64362130	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.3
15	64362174	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.357143
15	64362297	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.153846
15	64362299	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64362320	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64362430	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64362431	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64362470	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.214286
15	64362534	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.583333
15	64363158	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.3
15	64363182	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.25
15	64363293	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.3
15	64363294	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.210526
15	64363336	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64363837	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.533333
15	64363840	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.277778
15	64363846	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64363907	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64363908	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.545455
15	64363943	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.214286
15	64363944	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64363972	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	64364001	A->G	-	ENSG00000259316	AC087632.1	protein_coding	Intergenic	.	.	Alu	0.315789
15	64465456	A->G	+	ENSG00000180357	ZNF609	protein_coding	Intergenic	.	.	Alu	0.142857
15	65668373	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65668382	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65668391	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3
15	65668737	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.6
15	65727341	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65734871	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.307692
15	65734899	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.230769
15	65734916	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65735121	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65735148	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65735160	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65735161	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.136364
15	65735206	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65735212	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.266667
15	65735256	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65737136	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65737151	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65737179	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.214286
15	65737247	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65737258	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.333333
15	65755569	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65768118	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65768133	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.157895
15	65774592	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65777530	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65779199	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65779293	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65779380	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.157895
15	65779582	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0666667
15	65779626	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.222222
15	65779742	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65779845	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65779846	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65779939	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
15	65779941	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65788241	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65788253	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0869565
15	65788370	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65788675	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.608696
15	65788690	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0714286
15	65789298	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.157895
15	65789302	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
15	65789303	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0645161
15	65789324	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65789333	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0606061
15	65789899	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.075
15	65789938	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.195652
15	65789939	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0869565
15	65789988	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0714286
15	66334610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
15	66334615	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
15	68059134	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.416667
15	68059269	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	68059590	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.117647
15	68059591	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.111111
15	68066220	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.333333
15	68066224	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.142857
15	68068197	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	72480149	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0540541
15	72481499	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0425532
15	72481565	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.127273
15	72481606	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0666667
15	72481627	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.047619
15	72481640	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0888889
15	72481901	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	72481954	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	72482953	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.103448
15	72499159	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72499173	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.7
15	72499176	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.25
15	72529441	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.272727
15	72561826	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72561853	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.7
15	72762738	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
15	72776222	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.142857
15	72778137	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.1875
15	72778140	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.333333
15	72779442	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.153846
15	72780613	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.157895
15	72780684	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.0909091
15	72780687	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.166667
15	73613879	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.454545
15	73627052	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.3
15	73627066	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.166667
15	74927741	A->G	-	ENSG00000178741	COX5A	protein_coding	Intergenic	.	.	Alu	0.4
15	75366011	A->G	-	ENSG00000140400	MAN2C1	protein_coding	Intergenic	.	.	Alu	0.142857
15	75424613	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	75438605	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	75885257	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.133333
15	75886740	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.583333
15	75999818	A->G	-	ENSG00000169752	NRG4	protein_coding	Intergenic	.	.	Alu	0.6
15	75999819	A->G	-	ENSG00000169752	NRG4	protein_coding	Intergenic	.	.	Alu	0.4
15	78887797	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0714286
15	78887803	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.230769
15	78887878	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.117647
15	78887879	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.264706
15	78887883	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.176471
15	78887896	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.1
15	78887959	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.178571
15	78888007	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0625
15	78888242	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0540541
15	78890013	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0857143
15	78890024	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0606061
15	78890097	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.075
15	78890582	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	78890585	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.1
15	78901405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
15	78901622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
15	78903480	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
15	78903518	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
15	78903536	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
15	78903655	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
15	78903656	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
15	78905700	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
15	78905701	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	78905736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	80065734	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80083729	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.117647
15	80088334	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.333333
15	80088335	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80089439	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80089508	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.176471
15	80097079	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
15	80097099	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.130435
15	80097100	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.347826
15	80097183	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.3
15	80097252	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.285714
15	80097261	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.25
15	80097262	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.5
15	80097410	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80097414	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80097483	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.5
15	80097487	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80097488	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.444444
15	80097505	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.176471
15	80103918	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.307692
15	80103928	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.384615
15	80103978	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80104267	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.230769
15	80104380	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.3
15	80111998	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.6
15	82824227	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.2
15	82824937	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0869565
15	82824941	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.130435
15	82825002	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.25
15	82825004	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.25
15	82825019	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0909091
15	82825074	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0952381
15	83054136	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.142857
15	83054146	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.375
15	83054156	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.461538
15	83054213	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.5
15	83190085	A->G	-	ENSG00000166503	HDGFL3	protein_coding	Intergenic	.	.	Alu	0.181818
15	83190093	A->G	-	ENSG00000166503	HDGFL3	protein_coding	Intergenic	.	.	Alu	0.181818
15	85586336	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.272727
15	85586439	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.181818
15	85586456	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.2
15	89097952	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.117647
15	89097984	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.230769
15	89098100	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	90077890	A->G	-	ENSG00000259291	ZNF710-AS1	antisense	Intergenic	.	.	Alu	0.133333
15	90078124	A->G	-	ENSG00000259291	ZNF710-AS1	antisense	Intergenic	.	.	Alu	0.181818
15	90389553	A->G	+	ENSG00000140575	IQGAP1	protein_coding	Intergenic	.	.	Alu	0.142857
15	92894674	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0645161
15	92894769	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0769231
15	92894771	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.166667
15	92911617	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	92911676	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.1
15	92913600	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	92916826	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	92950594	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	92987373	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.25
15	92987414	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.333333
15	92987480	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.3
15	92987486	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.2
16	10748027	A->G	+	ENSG00000103274	NUBP1	protein_coding	Intergenic	.	.	Alu	0.230769
16	11707825	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.2
16	11707830	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.4
16	11707891	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.363636
16	11720813	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.153846
16	11720814	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.214286
16	11720815	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.714286
16	11720874	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.181818
16	11724090	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.117647
16	11724200	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.214286
16	11726168	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.2
16	11726844	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.0952381
16	11792046	A->G	-	ENSG00000122299	ZC3H7A	protein_coding	Intergenic	.	.	Alu	0.166667
16	11848915	A->G	-	ENSG00000171490	RSL1D1	protein_coding	Intergenic	.	.	Alu	0.2
16	11848916	A->G	-	ENSG00000171490	RSL1D1	protein_coding	Intergenic	.	.	Alu	0.266667
16	11895719	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.2
16	11901884	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.214286
16	11902680	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.333333
16	11903604	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	14978597	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.125
16	14979390	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	14979492	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.285714
16	14979496	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	14980741	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15083290	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15085060	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.230769
16	15684084	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intergenic	.	.	Alu	0.363636
16	15701021	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.125
16	15733643	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.2
16	15956599	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	18922835	A->G	-	ENSG00000157106	SMG1	protein_coding	Intergenic	.	.	Alu	0.176471
16	18922836	A->G	-	ENSG00000157106	SMG1	protein_coding	Intergenic	.	.	Alu	0.176471
16	20686750	A->G	+	ENSG00000166743	ACSM1	protein_coding	Intergenic	.	.	Alu	0.111111
16	20699458	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.230769
16	20702419	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.2
16	20710580	A->G	+	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.4
16	20715443	A->G	+	ENSG00000283399	AC004381.2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	20715444	A->G	+	ENSG00000283399	AC004381.2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	20739243	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.3
16	20739395	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.166667
16	20739450	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.166667
16	20739709	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.25
16	20739764	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.2
16	20740284	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.111111
16	21504329	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
16	21504392	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.176471
16	21506194	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.136364
16	21506213	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0666667
16	21506885	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.238095
16	21506900	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.15
16	21516577	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.210526
16	21517382	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
16	21868346	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.277778
16	21868384	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.137931
16	21868439	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.35
16	21868455	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.142857
16	21868461	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.272727
16	21956059	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.3
16	21956072	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.166667
16	21956087	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.2
16	22477938	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
16	23448381	A->G	-	ENSG00000168434	COG7	protein_coding	Intergenic	.	.	Alu	0.272727
16	23448405	A->G	-	ENSG00000168434	COG7	protein_coding	Intergenic	.	.	Alu	0.2
16	23508244	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.230769
16	23508245	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23508285	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.363636
16	27528189	A->G	-	ENSG00000077235	GTF3C1	protein_coding	Intergenic	.	.	Alu	0.307692
16	27528192	A->G	-	ENSG00000077235	GTF3C1	protein_coding	Intergenic	.	.	Alu	0.214286
16	27528193	A->G	-	ENSG00000077235	GTF3C1	protein_coding	Intergenic	.	.	Alu	0.166667
16	28168474	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28828416	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.214286
16	28828439	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.153846
16	28828466	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.142857
16	28828536	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.3
16	28828539	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.3
16	28828825	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.111111
16	28828855	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0869565
16	28828856	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.166667
16	28828909	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.117647
16	28828923	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.625
16	28828926	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.571429
16	28828993	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.173913
16	28829011	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.36
16	28829136	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.172414
16	28829237	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.105263
16	28831381	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0789474
16	28831428	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.166667
16	28831504	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.08
16	28831527	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.190476
16	28831686	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.210526
16	28831722	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.210526
16	28831724	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.142857
16	28955126	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.833333
16	28955143	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.461538
16	28955146	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.142857
16	28955851	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	29124655	A->G	-	ENSG00000284649	AC009093.8	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	29557241	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
16	29561357	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
16	29591618	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
16	29591682	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
16	29591793	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
16	30245105	A->G	-	ENSG00000198064	NPIPB13	protein_coding	Intergenic	.	.	Alu	0.5
16	30550318	A->G	-	ENSG00000260869	AC002310.4	protein_coding	Intergenic	.	.	Alu	0.4
16	30550319	A->G	-	ENSG00000260869	AC002310.4	protein_coding	Intergenic	.	.	Alu	0.2
16	30550339	A->G	-	ENSG00000260869	AC002310.4	protein_coding	Intergenic	.	.	Alu	0.181818
16	30654008	A->G	+	ENSG00000156858	PRR14	protein_coding	Intergenic	.	.	Alu	0.235294
16	31063406	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.181818
16	31121891	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0909091
16	31121925	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0416667
16	31122616	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.142857
16	31123063	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.4
16	31123076	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.727273
16	31454139	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
16	31454160	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
16	31454205	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
16	31454219	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	31454750	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
16	31454777	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
16	31454850	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
16	31456213	A->G	-	.	.	.	Intergenic	.	.	Alu	0.291667
16	31456220	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
16	31456229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
16	31456247	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
16	46921277	A->G	+	ENSG00000166123	GPT2	protein_coding	Intergenic	.	.	Alu	0.2
16	46921278	A->G	+	ENSG00000166123	GPT2	protein_coding	Intergenic	.	.	Alu	0.2
16	50164868	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.181818
16	50746258	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0909091
16	50749108	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.3
16	53440633	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.166667
16	56418745	A->G	-	ENSG00000159461	AMFR	protein_coding	Intergenic	.	.	Alu	0.2
16	56940406	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.357143
16	56940446	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.1
16	56940472	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.156863
16	56940479	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.345455
16	56940490	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0540541
16	56940516	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0697674
16	56940810	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0810811
16	56940812	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0571429
16	56940859	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.1875
16	56940860	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0606061
16	58605883	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.142857
16	58612019	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.238095
16	58612071	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.117647
16	58622816	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.230769
16	66607991	A->G	+	ENSG00000140931	CMTM3	protein_coding	Intergenic	.	.	Alu	0.166667
16	66828286	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	67072948	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.2
16	67072949	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.2
16	67476779	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.166667
16	67476785	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.181818
16	67477801	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.181818
16	67553982	A->G	-	ENSG00000261386	AC027682.4	lincRNA	Intergenic	.	.	Alu	0.2
16	67559173	A->G	-	ENSG00000261386	AC027682.4	lincRNA	Intergenic	.	.	Alu	0.133333
16	67565105	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.5
16	67565254	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67590701	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67590747	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67851069	A->G	+	ENSG00000102898	NUTF2	protein_coding	Intergenic	.	.	Alu	0.181818
16	68276880	A->G	+	ENSG00000103064	SLC7A6	protein_coding	Intergenic	.	.	Alu	0.4
16	69379940	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.133333
16	69380536	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.333333
16	69380571	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.2
16	69380594	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.1875
16	69380595	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.117647
16	69380600	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.125
16	69380862	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.125
16	69580773	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69581116	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69584024	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69584650	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	70116778	A->G	+	ENSG00000090857	PDPR	protein_coding	Intergenic	.	.	Alu	0.2
16	70429838	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	Intergenic	.	.	Alu	0.333333
16	70429839	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	Intergenic	.	.	Alu	0.454545
16	70429862	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	Intergenic	.	.	Alu	0.166667
16	70429870	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	Intergenic	.	.	Alu	0.272727
16	74298661	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.15
16	74298662	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.15
16	74298715	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.266667
16	74298731	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.25
16	74298777	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.15
16	74299515	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.25
16	74324640	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.2
16	74324702	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.142857
16	74324707	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.357143
16	74328647	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.2
16	74328658	A->G	-	ENSG00000259972	AC009120.2	processed_transcript	Intergenic	.	.	Alu	0.2
16	74363483	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	74364237	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	74364506	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
16	74365721	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
16	74630295	A->G	-	ENSG00000168411	RFWD3	protein_coding	Intergenic	.	.	Alu	0.181818
16	74641248	A->G	-	ENSG00000168411	RFWD3	protein_coding	Intergenic	.	.	Alu	0.166667
16	74641255	A->G	-	ENSG00000168411	RFWD3	protein_coding	Intergenic	.	.	Alu	0.181818
16	74641301	A->G	-	ENSG00000168411	RFWD3	protein_coding	Intergenic	.	.	Alu	0.1875
16	75592832	A->G	-	ENSG00000259992	AC025287.1	processed_transcript	Intergenic	.	.	Alu	0.25
16	75592840	A->G	-	ENSG00000259992	AC025287.1	processed_transcript	Intergenic	.	.	Alu	0.142857
16	75648882	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.190476
16	75650697	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.3
16	78121772	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.0952381
16	78121779	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.111111
16	78121791	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.352941
16	78121913	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.357143
16	78122815	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.16
16	78122873	A->G	+	ENSG00000186153	WWOX	protein_coding	Intergenic	.	.	Alu	0.25
16	81029474	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.3
16	81029493	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.5
16	81029512	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.166667
16	81029714	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.181818
16	81029741	A->G	+	ENSG00000166451	CENPN	protein_coding	Intergenic	.	.	Alu	0.153846
16	81930588	A->G	+	ENSG00000197943	PLCG2	protein_coding	Intergenic	.	.	Alu	0.3
16	85558958	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.0645161
16	85560236	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.125
16	85560265	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	85560334	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.272727
16	85560873	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.25
16	85560943	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.111111
16	85560951	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.0833333
16	85560985	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.08
16	85561025	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.115385
16	85561047	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.363636
16	85561057	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.25
16	85567797	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.578947
16	85797296	A->G	-	ENSG00000131148	EMC8	protein_coding	Intergenic	.	.	Alu	0.166667
16	87379225	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.2
16	87396462	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.153846
16	87396957	A->G	+	ENSG00000261592	AC010531.3	antisense	Intergenic	.	.	Alu	0.25
16	87400947	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.181818
16	87401602	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.16129
16	87401730	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.0444444
16	88591408	A->G	+	ENSG00000158545	ZC3H18	protein_coding	Intergenic	.	.	Alu	0.636364
16	88675613	A->G	+	ENSG00000260630	SNAI3-AS1	antisense	Intergenic	.	.	Alu	0.3
16	88794246	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
16	88794854	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
16	88794865	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
16	88795091	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
16	89467325	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.5
16	89467436	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.153846
16	89467442	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.454545
16	89467495	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.272727
16	89467501	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.272727
16	89469405	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89471673	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89471677	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.166667
16	89724465	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.2
16	89737439	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.2
16	89737458	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.142857
16	89737469	A->G	-	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.181818
16	89878099	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.2
16	89891884	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.3
17	10129300	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.2
17	10141205	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.181818
17	10175045	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.25
17	10175118	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.166667
17	10186243	A->G	-	ENSG00000007237	GAS7	protein_coding	Intergenic	.	.	Alu	0.2
17	16051709	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.2
17	16471253	A->G	+	ENSG00000175061	LRRC75A-AS1	processed_transcript	Intergenic	.	.	Alu	0.277778
17	17273703	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.153846
17	17275176	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.235294
17	17277480	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.142857
17	17277556	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.25
17	17277899	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.176471
17	17277962	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.125
17	18271803	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.0689655
17	18271880	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.125
17	18272225	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.214286
17	18272248	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.428571
17	18272715	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.0952381
17	18273692	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.15
17	18273703	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.157895
17	18651641	A->G	+	ENSG00000189375	TBC1D28	protein_coding	Intergenic	.	.	Alu	0.5
17	21026195	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.25
17	21032815	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.230769
17	21039321	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.181818
17	21039333	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.153846
17	21039455	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.0408163
17	21039504	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.0465116
17	21292359	A->G	+	ENSG00000034152	MAP2K3	protein_coding	Intergenic	.	.	Alu	0.466667
17	28060506	A->G	+	ENSG00000087095	NLK	protein_coding	Intergenic	.	.	Alu	0.2
17	28080325	A->G	+	ENSG00000087095	NLK	protein_coding	Intergenic	.	.	Alu	0.2
17	28666691	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.8
17	28931047	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.25
17	28931055	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.166667
17	28932754	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.2
17	28932859	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.3
17	28947046	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.142857
17	28947069	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.153846
17	28947095	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.181818
17	29271990	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.272727
17	29275116	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	29277901	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29279625	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.222222
17	29279631	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	29279857	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.153846
17	29279957	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.210526
17	29279979	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	29279983	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	29281576	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.125
17	29283441	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	29288208	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
17	29288250	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.3
17	29289057	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0555556
17	29289115	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0571429
17	29289124	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0714286
17	29290102	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0588235
17	29290112	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0789474
17	29290122	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0967742
17	29290127	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.137931
17	29290429	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	29290452	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.24
17	29672739	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.181818
17	29672776	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.3
17	29672871	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.466667
17	29672899	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.117647
17	29672900	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.176471
17	29672903	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	29672920	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.125
17	29673518	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.363636
17	29749851	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29751363	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.142857
17	29751368	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.153846
17	29753198	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.3
17	29753199	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29758025	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.153846
17	29758041	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.142857
17	29923797	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29923844	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.3
17	29923849	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	30387279	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.0740741
17	30390146	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.15
17	30390191	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.0909091
17	30390217	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.0952381
17	30391320	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.0952381
17	30444663	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.5
17	30445377	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.230769
17	30445390	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.166667
17	30445406	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.153846
17	30450231	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.181818
17	30457766	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.25
17	30457769	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.272727
17	30457778	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.0909091
17	30458100	A->G	+	ENSG00000108582	CPD	protein_coding	Intergenic	.	.	Alu	0.24
17	30736992	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	30745789	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	30745799	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
17	30896677	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
17	30896715	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
17	30896716	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	30896745	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	30896755	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	30896781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	30896824	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	30896880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
17	30897770	A->G	+	ENSG00000172171	TEFM	protein_coding	Intergenic	.	.	Alu	0.133333
17	30897799	A->G	+	ENSG00000172171	TEFM	protein_coding	Intergenic	.	.	Alu	0.133333
17	30898485	A->G	+	ENSG00000172171	TEFM	protein_coding	Intergenic	.	.	Alu	0.8
17	32357102	A->G	+	ENSG00000265794	AC005899.4	processed_transcript	Intergenic	.	.	Alu	0.166667
17	32447981	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.166667
17	32451770	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.0952381
17	32451839	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.130435
17	32451842	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.0869565
17	32465718	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.166667
17	32465719	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.166667
17	32465724	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.166667
17	32465749	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.142857
17	32465783	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.230769
17	32466231	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.2
17	32466262	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.153846
17	35078814	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35078832	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35085532	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	36551284	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36551287	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.5
17	36568953	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.230769
17	36569250	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.2
17	36569291	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	36569361	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36587802	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36995623	A->G	+	ENSG00000275700	AATF	protein_coding	Intergenic	.	.	Alu	0.4
17	36995637	A->G	+	ENSG00000275700	AATF	protein_coding	Intergenic	.	.	Alu	0.9
17	39472096	A->G	+	ENSG00000167258	CDK12	protein_coding	Intergenic	.	.	Alu	0.3
17	39472167	A->G	+	ENSG00000167258	CDK12	protein_coding	Intergenic	.	.	Alu	0.210526
17	39472231	A->G	+	ENSG00000167258	CDK12	protein_coding	Intergenic	.	.	Alu	0.181818
17	39472445	A->G	+	ENSG00000167258	CDK12	protein_coding	Intergenic	.	.	Alu	0.3
17	39991058	A->G	+	ENSG00000108344	PSMD3	protein_coding	Intergenic	.	.	Alu	0.2
17	41851655	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	41852185	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
17	41852213	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
17	41852216	A->G	-	.	.	.	Intergenic	.	.	Alu	0.233333
17	41852218	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
17	41852221	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
17	41852243	A->G	-	.	.	.	Intergenic	.	.	Alu	0.21875
17	41852249	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
17	41852290	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	41852534	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
17	41852556	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
17	41852608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.521739
17	41852611	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
17	41852628	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
17	41852642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.32
17	41852643	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	41983217	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.6
17	41983262	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.272727
17	42004930	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.153846
17	42004978	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.25
17	42005806	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.2
17	42006250	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.2
17	42006612	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.166667
17	42008130	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.454545
17	42151247	A->G	-	ENSG00000267261	AC099811.2	protein_coding	Intergenic	.	.	Alu	0.176471
17	42371926	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.133333
17	42371936	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.142857
17	42377304	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42377356	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.222222
17	42378528	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.181818
17	42384671	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.0869565
17	42384715	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42385317	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.153846
17	42386100	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.181818
17	43000929	A->G	+	ENSG00000131469	RPL27	protein_coding	Intergenic	.	.	Alu	0.25
17	43220191	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.333333
17	43220192	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.666667
17	43220222	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.125
17	43220267	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.166667
17	43221847	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.9
17	43221854	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.3
17	43222197	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.461538
17	43222252	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.142857
17	43222265	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.5
17	43222266	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.769231
17	43222283	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.363636
17	43222293	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.166667
17	43222305	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.2
17	43222447	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.636364
17	43226489	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.3
17	43226508	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.444444
17	43226525	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.333333
17	43226535	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.111111
17	43226562	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.117647
17	43226595	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.285714
17	43226614	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.230769
17	43226667	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.2
17	45505924	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
17	45506011	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	45564885	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	45564907	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
17	45573674	A->G	-	.	.	.	Intergenic	.	.	Alu	0.642857
17	45574198	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
17	45574260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0810811
17	45574263	A->G	-	.	.	.	Intergenic	.	.	Alu	0.162162
17	45574321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.148148
17	45574803	A->G	-	.	.	.	Intergenic	.	.	Alu	0.75
17	45576039	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
17	45576072	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
17	45576073	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	45576107	A->G	-	.	.	.	Intergenic	.	.	Alu	0.291667
17	45576110	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
17	45577381	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
17	45577431	A->G	-	.	.	.	Intergenic	.	.	Alu	0.575
17	45577480	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	45579743	A->G	-	.	.	.	Intergenic	.	.	Alu	0.790698
17	45580923	A->G	-	.	.	.	Intergenic	.	.	Alu	0.72
17	45581534	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
17	45581561	A->G	-	.	.	.	Intergenic	.	.	Alu	0.793103
17	45582922	A->G	-	.	.	.	Intergenic	.	.	Alu	0.740741
17	45583394	A->G	-	.	.	.	Intergenic	.	.	Alu	0.9375
17	45583824	A->G	-	.	.	.	Intergenic	.	.	Alu	0.714286
17	46047996	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.3
17	46048005	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.4
17	46158783	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.125
17	46158787	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.125
17	46160460	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.4
17	46185854	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.1
17	46186301	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0714286
17	46186331	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0714286
17	46186789	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0833333
17	46489539	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
17	46489550	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
17	46489585	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
17	46489586	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
17	46489589	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
17	46489603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	46489615	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
17	46500924	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	46500925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
17	46500994	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	46501355	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
17	46501404	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
17	46501410	A->G	+	.	.	.	Intergenic	.	.	Alu	0.24
17	46501411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
17	46502313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.526316
17	46502359	A->G	+	.	.	.	Intergenic	.	.	Alu	0.62963
17	46502367	A->G	+	.	.	.	Intergenic	.	.	Alu	0.321429
17	46502428	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
17	46502431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
17	46502467	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
17	48871116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
17	48871144	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
17	48871145	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
17	48871165	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
17	48871177	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	48872975	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	48872980	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	48872981	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
17	48872999	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	48873017	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	48943513	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.384615
17	48943514	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.142857
17	49802546	A->G	+	ENSG00000136504	KAT7	protein_coding	Intergenic	.	.	Alu	0.5
17	49802551	A->G	+	ENSG00000136504	KAT7	protein_coding	Intergenic	.	.	Alu	0.2
17	50384315	A->G	-	ENSG00000108829	LRRC59	protein_coding	Intergenic	.	.	Alu	0.230769
17	50384325	A->G	-	ENSG00000108829	LRRC59	protein_coding	Intergenic	.	.	Alu	0.142857
17	50384328	A->G	-	ENSG00000108829	LRRC59	protein_coding	Intergenic	.	.	Alu	0.153846
17	50384332	A->G	-	ENSG00000108829	LRRC59	protein_coding	Intergenic	.	.	Alu	0.333333
17	50384616	A->G	-	ENSG00000108829	LRRC59	protein_coding	Intergenic	.	.	Alu	0.133333
17	50735977	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.166667
17	50741933	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.133333
17	50741995	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.7
17	51032701	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.363636
17	51066861	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.357143
17	51079363	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.3
17	51086862	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51090373	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.133333
17	51098630	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51098631	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.272727
17	51100881	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.117647
17	51100884	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.111111
17	51106187	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.272727
17	51108152	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51108340	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.214286
17	51109852	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.3
17	51111705	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51111776	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.117647
17	51113598	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.117647
17	51113912	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51115286	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.263158
17	51115287	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.4375
17	51116183	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51116184	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51116244	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.272727
17	51116718	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51117662	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51190998	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.214286
17	51191025	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.272727
17	51251958	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.272727
17	51252469	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.272727
17	51252475	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.4
17	51274498	A->G	+	ENSG00000011260	UTP18	protein_coding	Intergenic	.	.	Alu	0.2
17	58274576	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.136364
17	58274584	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0909091
17	58274617	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0359712
17	58274637	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0661157
17	58274654	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0438596
17	58274663	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.390244
17	58274672	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.037037
17	58274696	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0804598
17	58274720	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.285714
17	58274725	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.703704
17	58274733	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0416667
17	58274737	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.376812
17	58274738	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.101449
17	58274751	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0694444
17	58274758	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.028169
17	58274763	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.057971
17	58274787	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0697674
17	58274937	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.153846
17	58274950	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0909091
17	58274961	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.4
17	58274962	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.64
17	58274976	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.151515
17	58274980	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0909091
17	58275029	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0555556
17	58275038	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0526316
17	58275040	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.146341
17	58275041	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.195122
17	58275042	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.219512
17	58275043	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.131579
17	58275044	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.216216
17	58275047	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.828571
17	58275053	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.105263
17	58275069	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.05
17	58275078	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0454545
17	58275083	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0289855
17	58275084	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0724638
17	58275136	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.0793651
17	58275144	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.162791
17	58342828	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	59203198	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.148148
17	59203288	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.555556
17	59203289	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.611111
17	59203299	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.352941
17	59203305	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.266667
17	59203311	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.307692
17	59203318	A->G	+	ENSG00000265415	AC099850.3	antisense	Intergenic	.	.	Alu	0.166667
17	59206133	A->G	+	ENSG00000265303	AC099850.2	protein_coding	Intergenic	.	.	Alu	0.153846
17	59829034	A->G	-	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.166667
17	59842499	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
17	59842598	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0289855
17	59842599	A->G	+	.	.	.	Intergenic	.	.	Alu	0.028169
17	59842610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0609756
17	59842898	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
17	59842906	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0338983
17	59842950	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0327869
17	59843007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
17	59843112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	59844512	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	60217380	A->G	-	ENSG00000170832	USP32	protein_coding	Intergenic	.	.	Alu	0.4
17	60217384	A->G	-	ENSG00000170832	USP32	protein_coding	Intergenic	.	.	Alu	0.2
17	60217387	A->G	-	ENSG00000170832	USP32	protein_coding	Intergenic	.	.	Alu	0.4
17	60218195	A->G	-	ENSG00000170832	USP32	protein_coding	Intergenic	.	.	Alu	0.214286
17	61998812	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62060520	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.153846
17	62060525	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62451628	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	62451651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	62475454	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.153846
17	62492842	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.181818
17	62492910	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.416667
17	62582001	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.272727
17	62589826	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.3
17	62589830	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.545455
17	63835988	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.214286
17	63836001	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.142857
17	63836008	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.307692
17	63840042	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.25
17	63840053	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.272727
17	63840066	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.7
17	64469660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
17	64469661	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
17	64470274	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	64471694	A->G	+	.	.	.	Intergenic	.	.	Alu	0.916667
17	64471696	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	64471719	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	64522053	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.4
17	64645471	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.142857
17	64648617	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
17	64655812	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.142857
17	64817543	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
17	65038160	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.181818
17	65038291	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.2
17	65038653	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.333333
17	65042507	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.1
17	65043514	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0952381
17	65052318	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.181818
17	67237083	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.1875
17	67348856	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.227273
17	67348872	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.421053
17	67348873	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.315789
17	67348874	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.380952
17	67348884	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.142857
17	67348982	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.6
17	67349127	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67349157	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.35
17	67349158	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.15
17	67349184	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1
17	67349198	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.681818
17	67352237	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1875
17	67352241	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.117647
17	67354197	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.193548
17	67354243	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67354283	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67354287	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0740741
17	67354324	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.153846
17	67354327	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67354358	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.315789
17	67354772	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0869565
17	67355262	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0645161
17	67358018	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.16
17	67358021	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.666667
17	67358060	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.428571
17	67358086	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0526316
17	67358105	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0363636
17	67358142	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0806452
17	67358195	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0540541
17	67358196	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.138889
17	67358311	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.272727
17	67358322	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.259259
17	67358323	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0740741
17	67358350	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0526316
17	67358376	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.333333
17	67358381	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.46875
17	67358424	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.151515
17	67358521	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.363636
17	67358537	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.454545
17	67884555	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.25
17	67884651	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.230769
17	67908390	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.181818
17	67973775	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.384615
17	68040363	A->G	+	ENSG00000182481	KPNA2	protein_coding	Intergenic	.	.	Alu	0.227273
17	68126158	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0434783
17	74782320	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.25
17	74782336	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.4375
17	74782874	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.25
17	74782945	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.2
17	75104552	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.125
17	75104581	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.2
17	75104630	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.166667
17	75104650	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.277778
17	75106855	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	75179757	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	75179839	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75179840	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75180674	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.125
17	75366692	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.1
17	75367376	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75367395	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.117647
17	75367396	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.117647
17	75373891	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75374352	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.473684
17	75374881	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.666667
17	75375044	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.230769
17	75375181	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.142857
17	75375187	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75386322	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.176471
17	75387109	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75387309	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.272727
17	75387317	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.272727
17	75388282	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.133333
17	75388285	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.133333
17	75400553	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.117647
17	75787329	A->G	+	ENSG00000132478	UNK	protein_coding	Intergenic	.	.	Alu	0.153846
17	75796420	A->G	+	ENSG00000132478	UNK	protein_coding	Intergenic	.	.	Alu	0.2
17	75902506	A->G	-	ENSG00000204316	MRPL38	protein_coding	Intergenic	.	.	Alu	0.4
17	76719385	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.1
17	76719391	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0909091
17	76719453	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.111111
17	76719471	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.142857
17	76719516	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.133333
17	76719531	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.3125
17	76719887	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0952381
17	76719896	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.176471
17	76720082	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0625
17	76720106	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.172414
17	76722595	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0869565
17	76722629	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.08
17	76723713	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.111111
17	76724183	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0740741
17	76724282	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.268293
17	76724286	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.146341
17	76724402	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0833333
17	76725296	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0689655
17	76725323	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0666667
17	76725324	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0714286
17	76728322	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.2
17	78378084	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	78378085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	78379931	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	78379953	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.117647
17	78379960	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.105263
17	78410659	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.2
17	78689474	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.3
17	78810520	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.2
17	78810522	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.5
17	78818071	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.25
17	78834137	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.133333
17	78834138	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.142857
17	78834139	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.142857
17	78890478	A->G	-	ENSG00000178404	CEP295NL	protein_coding	Intergenic	.	.	Alu	0.2
17	81634946	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.5
17	81634954	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
17	81837220	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	81837249	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	81837255	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
17	81849244	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.2
17	81857413	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.0909091
17	81857416	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.0625
17	81858025	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.137931
17	81858124	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.125
17	81858172	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.3
17	81881229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.480769
17	81881230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.185185
17	81881282	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0487805
17	81881291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0731707
17	81881294	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
17	81881341	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0888889
17	81881351	A->G	-	.	.	.	Intergenic	.	.	Alu	0.564103
17	81881354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
17	81881378	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	81881389	A->G	-	.	.	.	Intergenic	.	.	Alu	0.146341
17	81881420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
17	81881425	A->G	-	.	.	.	Intergenic	.	.	Alu	0.21875
17	81881441	A->G	-	.	.	.	Intergenic	.	.	Alu	0.361111
17	81881465	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
17	81881703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.857143
17	81881729	A->G	-	.	.	.	Intergenic	.	.	Alu	0.227273
17	81881732	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
17	81881733	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
17	81881769	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	81881779	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
17	81881782	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
17	81881797	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
17	81881836	A->G	-	.	.	.	Intergenic	.	.	Alu	0.695652
17	81881837	A->G	-	.	.	.	Intergenic	.	.	Alu	0.619048
17	81881853	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	81882166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	81882178	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81882249	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	81882264	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	81882273	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	81882375	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
17	81882933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
17	81882945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	81882946	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	81883000	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
17	81883008	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	81883022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
17	81883041	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
17	81883324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81883467	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
17	81883509	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
17	81883539	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
17	81883598	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	81883599	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
17	81883661	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	81883721	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	81883780	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
17	81883790	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0810811
17	81883796	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
17	81883907	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	81883962	A->G	-	.	.	.	Intergenic	.	.	Alu	0.241379
17	81883970	A->G	-	.	.	.	Intergenic	.	.	Alu	0.423077
17	81883987	A->G	-	.	.	.	Intergenic	.	.	Alu	0.257143
17	81883993	A->G	-	.	.	.	Intergenic	.	.	Alu	0.184211
17	81884003	A->G	-	.	.	.	Intergenic	.	.	Alu	0.515152
17	81884029	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
17	81884039	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
17	81884069	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
17	81884088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.106061
17	81884099	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0701754
17	81884107	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
17	81884969	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	81885005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
17	81885014	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	81886709	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
17	81886728	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0289855
17	81886760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
17	81886785	A->G	-	.	.	.	Intergenic	.	.	Alu	0.121951
17	81886831	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	81886836	A->G	-	.	.	.	Intergenic	.	.	Alu	0.114286
17	81886838	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	81886839	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
17	81886840	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
17	81886858	A->G	-	.	.	.	Intergenic	.	.	Alu	0.264706
17	81886859	A->G	-	.	.	.	Intergenic	.	.	Alu	0.371429
17	81886866	A->G	-	.	.	.	Intergenic	.	.	Alu	0.27027
17	81886871	A->G	-	.	.	.	Intergenic	.	.	Alu	0.195122
17	81886890	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
17	81886906	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0638298
17	81886935	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
17	81886936	A->G	-	.	.	.	Intergenic	.	.	Alu	0.170732
17	81886942	A->G	-	.	.	.	Intergenic	.	.	Alu	0.418605
17	81887017	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
17	81887022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
17	81887046	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	81887078	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	81887087	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81887088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
17	82256430	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.2
17	82256431	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.181818
17	82271213	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.2
17	82271214	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.3
17	82527522	A->G	+	ENSG00000141568	FOXK2	protein_coding	Intergenic	.	.	Alu	0.181818
17	82527550	A->G	+	ENSG00000141568	FOXK2	protein_coding	Intergenic	.	.	Alu	0.166667
17	82542930	A->G	+	ENSG00000141568	FOXK2	protein_coding	Intergenic	.	.	Alu	0.2
17	82626423	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.307692
17	82626447	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.142857
17	82626450	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.357143
17	82626451	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.166667
17	82628026	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.2
17	82628060	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.142857
18	12310376	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0465116
18	12310550	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.176471
18	12310605	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0833333
18	12310609	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.32
18	12310741	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0666667
18	12316934	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.153846
18	12317428	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.1
18	12318858	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.111111
18	12319916	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12322136	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.217391
18	12322139	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.291667
18	12322180	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.1
18	12322181	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12322223	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0833333
18	12322413	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.157895
18	12322429	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.08
18	12322448	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.103448
18	12322472	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0909091
18	12323108	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12323109	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.285714
18	12323118	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.117647
18	12323620	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.3
18	12723557	A->G	+	ENSG00000128789	PSMG2	protein_coding	Intergenic	.	.	Alu	0.181818
18	12723564	A->G	+	ENSG00000128789	PSMG2	protein_coding	Intergenic	.	.	Alu	0.153846
18	21019227	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.2
18	21019292	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.230769
18	21019343	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.266667
18	21019350	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.153846
18	21019358	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.272727
18	21019374	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.142857
18	21102717	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	21584629	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.4
18	21596144	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.1
18	21596159	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.0909091
18	21612938	A->G	+	ENSG00000167088	SNRPD1	protein_coding	Intergenic	.	.	Alu	0.105263
18	23461865	A->G	+	ENSG00000101782	RIOK3	protein_coding	Intergenic	.	.	Alu	0.2
18	23480832	A->G	+	ENSG00000101782	RIOK3	protein_coding	Intergenic	.	.	Alu	0.181818
18	26081392	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.125
18	26081878	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.1875
18	26081886	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.466667
18	26081936	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.333333
18	26081963	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.214286
18	35605391	A->G	+	ENSG00000141429	GALNT1	protein_coding	Intergenic	.	.	Alu	0.181818
18	36131027	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.333333
18	36131053	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.230769
18	36165976	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.181818
18	45953631	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.461538
18	46059909	A->G	-	ENSG00000152229	PSTPIP2	protein_coding	Intergenic	.	.	Alu	0.153846
18	46059944	A->G	-	ENSG00000152229	PSTPIP2	protein_coding	Intergenic	.	.	Alu	0.2
18	46096116	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.428571
18	46096944	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.153846
18	46184619	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.153846
18	46185912	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.153846
18	46192660	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.8
18	46192666	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.2
18	46192667	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.181818
18	49388110	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.166667
18	49389568	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.166667
18	49389608	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.4375
18	49390164	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.214286
18	62547691	A->G	+	ENSG00000141664	ZCCHC2	protein_coding	Intergenic	.	.	Alu	0.2
18	63401954	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.181818
18	76807710	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.181818
18	76807716	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.181818
18	76826360	A->G	+	ENSG00000130856	ZNF236	protein_coding	Intergenic	.	.	Alu	0.181818
18	79685038	A->G	+	ENSG00000060069	CTDP1	protein_coding	Intergenic	.	.	Alu	0.5
18	79793446	A->G	+	ENSG00000267780	AC021594.2	lincRNA	Intergenic	.	.	Alu	0.133333
18	79793471	A->G	+	ENSG00000267780	AC021594.2	lincRNA	Intergenic	.	.	Alu	0.2
18	79948479	A->G	-	ENSG00000122490	PQLC1	protein_coding	Intergenic	.	.	Alu	0.0714286
18	79950264	A->G	-	ENSG00000122490	PQLC1	protein_coding	Intergenic	.	.	Alu	0.0645161
18	79974156	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.117647
18	79974178	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.176471
18	79984391	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.142857
18	79984408	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.2
18	79984507	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.1
18	79984533	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.277778
18	79984689	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.285714
18	79985454	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.107143
18	80122085	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.153846
18	80122086	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.142857
18	80122148	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.181818
19	10168952	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.2
19	10179429	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.181818
19	10179430	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.181818
19	10179437	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.2
19	10325718	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.2
19	10326064	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.176471
19	10326161	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.125
19	10326863	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.2
19	10326963	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.2
19	10326988	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.363636
19	10326989	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.181818
19	10326996	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.25
19	10327532	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.214286
19	10328346	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.142857
19	10328451	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.1875
19	10328469	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.2
19	10328500	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.181818
19	10328544	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.272727
19	10330981	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.142857
19	10332092	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.181818
19	10332097	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.3
19	10332271	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.2
19	10656945	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.181818
19	10656949	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.153846
19	10658002	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.0833333
19	10658063	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.190476
19	10658064	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.136364
19	10658088	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.333333
19	10659137	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.125
19	10659155	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.0952381
19	10659305	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.103448
19	10660735	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.1
19	10661171	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.103448
19	10661219	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.0666667
19	10661222	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.0666667
19	10661238	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.12
19	10661711	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.259259
19	10661756	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.0909091
19	10663284	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.133333
19	10663747	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.214286
19	10663756	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.230769
19	10664563	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.2
19	10665106	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.307692
19	10665176	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.2
19	10666815	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.133333
19	10667028	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.294118
19	10667070	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.105263
19	10669168	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.2
19	10720693	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.307692
19	10723877	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.272727
19	10930374	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.125
19	10930629	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.130435
19	10930770	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.15
19	10930771	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.105263
19	10930803	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.105263
19	10930940	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.130435
19	10931032	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.153846
19	10931048	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.25
19	10931266	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.2
19	10931881	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.285714
19	10931890	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.142857
19	10931891	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.285714
19	11093125	A->G	+	ENSG00000130164	LDLR	protein_coding	Intergenic	.	.	Alu	0.2
19	11988375	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.0487805
19	11992910	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.0909091
19	11992915	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.08
19	11996252	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
19	12172178	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.181818
19	12177420	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.25
19	12177429	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.416667
19	12289821	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.117647
19	12626065	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.142857
19	12941318	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0384615
19	12941365	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0298507
19	12941396	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0327869
19	12941527	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.190476
19	12941536	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.333333
19	12941570	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.125
19	12941881	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0517241
19	12941978	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0307692
19	12942142	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.2
19	12942148	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.4
19	12942270	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.347826
19	12942315	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.375
19	12942318	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0952381
19	12942694	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0540541
19	12942850	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0266667
19	13837494	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0377358
19	13838364	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0229885
19	13838382	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0344828
19	14382591	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0625
19	14390490	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.2
19	14392332	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.2
19	14392641	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14392792	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.173913
19	14392831	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.111111
19	14398554	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.291667
19	14398596	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14398862	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14398866	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.76
19	14398935	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0555556
19	14398954	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0689655
19	14398959	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.08
19	14398983	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.103448
19	14399354	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.285714
19	14399879	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0967742
19	14399909	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0769231
19	14399939	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.27027
19	14399940	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.324324
19	14399943	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14399944	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.257143
19	14400227	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.3
19	14400263	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.105263
19	14400267	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.166667
19	14400282	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.166667
19	14400365	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.119048
19	14400388	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.047619
19	14400389	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.190476
19	14400536	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0769231
19	14400537	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.111111
19	14400590	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.075
19	14400591	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.075
19	14400645	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.12
19	14400741	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.166667
19	15329493	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.133333
19	15333184	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	15333187	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	15333287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
19	15333288	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
19	15334403	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	15334744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	15334798	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	15337856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	15340718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	15349302	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	16080750	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16081561	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16082308	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.15
19	16082418	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.272727
19	16082836	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16083351	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16083391	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0740741
19	16083908	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.3
19	16083996	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16084004	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.333333
19	16084052	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.105263
19	16084066	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16084103	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0952381
19	16084134	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.5
19	16120720	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.166667
19	16120790	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.384615
19	16123485	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.153846
19	16123495	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.166667
19	16123507	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.25
19	16123524	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.181818
19	16123531	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.3
19	16123544	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.4
19	16123545	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.2
19	16123550	A->G	-	ENSG00000167461	RAB8A	protein_coding	Intergenic	.	.	Alu	0.2
19	16398934	A->G	-	ENSG00000127527	EPS15L1	protein_coding	Intergenic	.	.	Alu	0.285714
19	16569666	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.363636
19	16636735	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.2
19	16636786	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.4
19	16636831	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.25
19	16636858	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.214286
19	16636909	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.3
19	16637273	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.2
19	16640876	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.3
19	16642313	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.142857
19	16642332	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.153846
19	16642340	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.142857
19	16642386	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.363636
19	16642410	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.2
19	16642457	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.2
19	16642467	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.142857
19	16642488	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.133333
19	16642540	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.181818
19	16642728	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.272727
19	16643017	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.5
19	16643018	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.461538
19	16643493	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.1875
19	16643494	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.1875
19	16643508	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.176471
19	17080808	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.153846
19	17084154	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.545455
19	17095979	A->G	+	ENSG00000269066	AC020908.3	antisense	Intergenic	.	.	Alu	0.2
19	18275361	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
19	18275362	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	18275538	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
19	18276214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
19	18276231	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0526316
19	18276232	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0526316
19	18277508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0408163
19	18277755	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0384615
19	18277779	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0851064
19	18908876	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.214286
19	18908915	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.25
19	18908941	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.307692
19	18908952	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.2
19	18908954	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.2
19	18912275	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.133333
19	18915086	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.2
19	18917516	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	19322127	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.272727
19	19322132	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.2
19	19322134	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.2
19	19322205	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.545455
19	19322343	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.4
19	19322344	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.2
19	19322417	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.666667
19	19322437	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.117647
19	19322478	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.5
19	19322493	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.166667
19	19326291	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.181818
19	19326304	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.166667
19	19329762	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.272727
19	19393183	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.2
19	19435323	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.2
19	19435349	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.6
19	19670650	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.8
19	19821079	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.3
19	19901880	A->G	+	ENSG00000184635	ZNF93	protein_coding	Intergenic	.	.	Alu	0.3
19	19901908	A->G	+	ENSG00000184635	ZNF93	protein_coding	Intergenic	.	.	Alu	0.363636
19	20225222	A->G	-	ENSG00000267383	AC011447.3	antisense	Intergenic	.	.	Alu	0.117647
19	20225234	A->G	-	ENSG00000267383	AC011447.3	antisense	Intergenic	.	.	Alu	0.166667
19	20225295	A->G	-	ENSG00000267383	AC011447.3	antisense	Intergenic	.	.	Alu	0.142857
19	20225331	A->G	-	ENSG00000267383	AC011447.3	antisense	Intergenic	.	.	Alu	0.133333
19	20225355	A->G	-	ENSG00000267383	AC011447.3	antisense	Intergenic	.	.	Alu	0.166667
19	20225956	A->G	-	ENSG00000267383	AC011447.3	antisense	Intergenic	.	.	Alu	0.125
19	20227235	A->G	-	ENSG00000267383	AC011447.3	antisense	Intergenic	.	.	Alu	0.166667
19	20542296	A->G	-	ENSG00000237440	ZNF737	protein_coding	Intergenic	.	.	Alu	0.357143
19	21021317	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.133333
19	21021898	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.230769
19	21022021	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.153846
19	21123403	A->G	+	ENSG00000160352	ZNF714	protein_coding	Intergenic	.	.	Alu	0.272727
19	21123408	A->G	+	ENSG00000160352	ZNF714	protein_coding	Intergenic	.	.	Alu	0.4
19	21123562	A->G	+	ENSG00000160352	ZNF714	protein_coding	Intergenic	.	.	Alu	0.8125
19	21123577	A->G	+	ENSG00000160352	ZNF714	protein_coding	Intergenic	.	.	Alu	0.2
19	21144292	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.117647
19	21147237	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.2
19	21147258	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.2
19	21147342	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.25
19	21319514	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.3
19	21320060	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.294118
19	21320076	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.166667
19	21320094	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.105263
19	21320129	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.153846
19	21320132	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.466667
19	21321370	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.181818
19	21376609	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.125
19	21376610	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.4375
19	21409002	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.166667
19	21409026	A->G	+	ENSG00000196268	ZNF493	protein_coding	Intergenic	.	.	Alu	0.25
19	21833825	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.2
19	21841813	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.7
19	21842166	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.181818
19	23220779	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	23220816	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
19	23220820	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	23220845	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	23370731	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.2
19	23370732	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.4
19	23371289	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.3
19	23924632	A->G	+	ENSG00000213967	ZNF726	protein_coding	Intergenic	.	.	Alu	0.181818
19	24058450	A->G	+	ENSG00000268362	AC092279.1	lincRNA	Intergenic	.	.	Alu	0.2
19	24090566	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.25
19	24090576	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.25
19	27807826	A->G	+	ENSG00000267575	AC006504.5	lincRNA	Intergenic	.	.	Alu	0.5
19	27807858	A->G	+	ENSG00000267575	AC006504.5	lincRNA	Intergenic	.	.	Alu	0.545455
19	27807863	A->G	+	ENSG00000267575	AC006504.5	lincRNA	Intergenic	.	.	Alu	0.6
19	27810333	A->G	+	ENSG00000267575	AC006504.5	lincRNA	Intergenic	.	.	Alu	1
19	29943871	A->G	+	ENSG00000105176	URI1	protein_coding	Intergenic	.	.	Alu	0.133333
19	29943920	A->G	+	ENSG00000105176	URI1	protein_coding	Intergenic	.	.	Alu	0.142857
19	34180037	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34180049	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34180056	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34187420	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34187551	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34187552	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34369149	A->G	+	ENSG00000105220	GPI	protein_coding	Intergenic	.	.	Alu	0.307692
19	34369161	A->G	+	ENSG00000105220	GPI	protein_coding	Intergenic	.	.	Alu	0.4
19	34369496	A->G	+	ENSG00000105220	GPI	protein_coding	Intergenic	.	.	Alu	0.153846
19	34369497	A->G	+	ENSG00000105220	GPI	protein_coding	Intergenic	.	.	Alu	0.230769
19	34369508	A->G	+	ENSG00000105220	GPI	protein_coding	Intergenic	.	.	Alu	0.2
19	34433860	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.166667
19	34444746	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.3
19	34471489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	34471972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
19	34471975	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	34472038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	34472146	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	35770676	A->G	+	ENSG00000267049	AC002398.1	antisense	Intergenic	.	.	Alu	0.727273
19	35770677	A->G	+	ENSG00000267049	AC002398.1	antisense	Intergenic	.	.	Alu	0.181818
19	35892468	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.181818
19	37325648	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.111111
19	37326903	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.166667
19	37326920	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.363636
19	37327650	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.3
19	37327671	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.166667
19	37327686	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.25
19	37328008	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.181818
19	37328180	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.133333
19	37328228	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.133333
19	39977638	A->G	+	ENSG00000013275	PSMC4	protein_coding	Intergenic	.	.	Alu	0.166667
19	41359086	A->G	-	ENSG00000123810	B9D2	protein_coding	Intergenic	.	.	Alu	0.181818
19	41866962	A->G	+	ENSG00000105372	RPS19	protein_coding	Intergenic	.	.	Alu	0.105263
19	41867724	A->G	+	ENSG00000105372	RPS19	protein_coding	Intergenic	.	.	Alu	0.166667
19	43662422	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.3
19	43663705	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.2
19	44750704	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.125
19	45004672	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.4
19	45019916	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45693897	A->G	+	ENSG00000011478	QPCTL	protein_coding	Intergenic	.	.	Alu	0.166667
19	45693914	A->G	+	ENSG00000011478	QPCTL	protein_coding	Intergenic	.	.	Alu	0.166667
19	45855841	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.25
19	47612341	A->G	+	ENSG00000063169	BICRA	protein_coding	Intergenic	.	.	Alu	0.166667
19	47759092	A->G	+	ENSG00000269656	NOP53-AS1	antisense	Intergenic	.	.	Alu	0.2
19	48328912	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.214286
19	48458546	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.133333
19	48459935	A->G	+	ENSG00000182324	KCNJ14	protein_coding	Intergenic	.	.	Alu	0.3
19	49087991	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.153846
19	49087992	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.142857
19	49088009	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.166667
19	49089257	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.363636
19	49089278	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.307692
19	49090039	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.3
19	49093015	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.111111
19	49093784	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.153846
19	49094454	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.3
19	49096151	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.15
19	49096187	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.4
19	49096580	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.2
19	49096584	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.5
19	49096590	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.181818
19	49096647	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.214286
19	49488800	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.0769231
19	49488908	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.08
19	49489294	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.103448
19	49489297	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.193548
19	49489305	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.466667
19	50803458	A->G	-	ENSG00000167747	C19orf48	protein_coding	Intergenic	.	.	Alu	0.125
19	50803461	A->G	-	ENSG00000167747	C19orf48	protein_coding	Intergenic	.	.	Alu	0.25
19	50803509	A->G	-	ENSG00000167747	C19orf48	protein_coding	Intergenic	.	.	Alu	0.176471
19	52193590	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.2
19	52544435	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52557110	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.153846
19	52557143	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.214286
19	52557154	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.181818
19	52557180	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.111111
19	52557341	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.125
19	52557396	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.166667
19	52557406	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.142857
19	52557448	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.1
19	52557478	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.444444
19	52559866	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.214286
19	52560233	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.272727
19	52560246	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.692308
19	52560258	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.416667
19	52560308	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52561604	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.105263
19	52561611	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.117647
19	52561641	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.1875
19	52561648	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.266667
19	52561673	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52561730	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52561752	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.636364
19	52561781	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.3
19	52562158	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.133333
19	52562168	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.529412
19	52562192	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.105263
19	52562213	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.166667
19	52562225	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.125
19	52562257	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.105263
19	52562258	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52562287	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.238095
19	52562293	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.1
19	52562298	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.15
19	52562327	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52562328	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.190476
19	52562348	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.117647
19	52562363	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.111111
19	52562813	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.4
19	52562874	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.117647
19	52562875	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.117647
19	52562913	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52562956	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.272727
19	52562959	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.7
19	52562973	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.181818
19	52562985	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.1875
19	52644768	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52644888	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.3
19	52644901	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.272727
19	52644902	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.181818
19	52644927	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52645706	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.125
19	52645724	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.117647
19	52646016	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.166667
19	52646025	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52646063	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.3
19	52646294	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.272727
19	52646297	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.583333
19	52646300	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.666667
19	52646301	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.25
19	52646363	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.4
19	52650342	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.3
19	52650359	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52699995	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	52700553	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
19	52700554	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	52700557	A->G	-	.	.	.	Intergenic	.	.	Alu	0.727273
19	52700558	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
19	52702388	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
19	52702406	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
19	52702626	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	53215226	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	53215253	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	53215258	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	53215259	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	53215296	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
19	53215305	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	53215340	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
19	53215359	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	53215376	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	53215384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.923077
19	53215698	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
19	53215699	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
19	53215720	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
19	53215775	A->G	+	.	.	.	Intergenic	.	.	Alu	0.35
19	53215823	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	53215847	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	53215867	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
19	53215893	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	53872443	A->G	+	ENSG00000179820	MYADM	protein_coding	Intergenic	.	.	Alu	0.125
19	54202249	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.02
19	54202933	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0423729
19	54204160	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0229885
19	54204457	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0208333
19	54205848	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.057971
19	54451802	A->G	+	ENSG00000167615	LENG8	protein_coding	Intergenic	.	.	Alu	1
19	55404802	A->G	-	ENSG00000108106	UBE2S	protein_coding	Intergenic	.	.	Alu	0.2
19	57282788	A->G	+	ENSG00000197714	ZNF460	protein_coding	Intergenic	.	.	Alu	0.0833333
19	57282813	A->G	+	ENSG00000197714	ZNF460	protein_coding	Intergenic	.	.	Alu	0.115385
19	57282909	A->G	+	ENSG00000197714	ZNF460	protein_coding	Intergenic	.	.	Alu	0.133333
19	57283741	A->G	+	ENSG00000197714	ZNF460	protein_coding	Intergenic	.	.	Alu	0.125
19	57287909	A->G	+	ENSG00000197714	ZNF460	protein_coding	Intergenic	.	.	Alu	0.0869565
19	57288272	A->G	+	ENSG00000197714	ZNF460	protein_coding	Intergenic	.	.	Alu	0.2
19	57298654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
19	57298707	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
19	57298720	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
19	57300520	A->G	+	.	.	.	Intergenic	.	.	Alu	0.025641
19	57300521	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0253165
19	57300527	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0365854
19	57300533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0243902
19	57301107	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
19	57301110	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
19	57303986	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0888889
19	57303994	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
19	57304017	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0338983
19	57843065	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.176471
19	57843070	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.111111
19	57843812	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.4
19	57865466	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
19	57865528	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.583333
19	57865559	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.454545
19	57865568	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.363636
19	57865569	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.545455
19	57865591	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.153846
19	57865986	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.3
19	57866010	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.307692
19	57866011	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.785714
19	57866018	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.75
19	57866063	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.217391
19	57866075	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.0952381
19	57866080	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.416667
19	57866149	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.111111
19	57866160	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.4
19	57866180	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
19	57866500	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.416667
19	57866568	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
19	57866633	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.2
19	57866643	A->G	+	ENSG00000204514	ZNF814	protein_coding	Intergenic	.	.	Alu	0.3
19	57906544	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.375
19	58458365	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
20	17575042	A->G	+	ENSG00000125868	DSTN	protein_coding	Intergenic	.	.	Alu	0.2
20	17676837	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.115385
20	17676862	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.09375
20	17676872	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	17676908	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0588235
20	17676941	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	17676943	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0540541
20	17677731	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0666667
20	17677756	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.206897
20	17677757	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0689655
20	17677832	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0967742
20	17677833	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.333333
20	17677834	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0882353
20	17962476	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.307692
20	17962478	A->G	-	ENSG00000125850	OVOL2	protein_coding	Intergenic	.	.	Alu	0.428571
20	20661353	A->G	-	ENSG00000188559	RALGAPA2	protein_coding	Intergenic	.	.	Alu	0.2
20	21312144	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.142857
20	21312182	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.133333
20	21312217	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.125
20	21315668	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.307692
20	25374040	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.2
20	25386759	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.2
20	25387317	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.125
20	31525950	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.153846
20	31529270	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.125
20	32199666	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.25
20	32199724	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.166667
20	32200375	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.333333
20	32201468	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.222222
20	32201522	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.125
20	32201551	A->G	-	ENSG00000126003	PLAGL2	protein_coding	Intergenic	.	.	Alu	0.214286
20	32832568	A->G	+	ENSG00000101367	MAPRE1	protein_coding	Intergenic	.	.	Alu	0.111111
20	32835104	A->G	+	ENSG00000101367	MAPRE1	protein_coding	Intergenic	.	.	Alu	0.117647
20	32851296	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.0810811
20	32851334	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.129032
20	32851349	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.0769231
20	32853170	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.0571429
20	32853171	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.147059
20	32854010	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.0714286
20	32854012	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.258065
20	32854017	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.233333
20	33491939	A->G	+	ENSG00000078699	CBFA2T2	protein_coding	Intergenic	.	.	Alu	0.3
20	33491944	A->G	+	ENSG00000078699	CBFA2T2	protein_coding	Intergenic	.	.	Alu	0.2
20	33491945	A->G	+	ENSG00000078699	CBFA2T2	protein_coding	Intergenic	.	.	Alu	0.2
20	34073913	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.3
20	34200636	A->G	+	ENSG00000101440	ASIP	protein_coding	Intergenic	.	.	Alu	1
20	35089324	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.2
20	35268964	A->G	-	ENSG00000261582	AL121753.1	protein_coding	Intergenic	.	.	Alu	0.125
20	35281725	A->G	-	ENSG00000242372	EIF6	protein_coding	Intergenic	.	.	Alu	0.153846
20	35630035	A->G	-	ENSG00000214078	CPNE1	protein_coding	Intergenic	.	.	Alu	0.272727
20	35630077	A->G	-	ENSG00000214078	CPNE1	protein_coding	Intergenic	.	.	Alu	1
20	35712272	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0277778
20	35717843	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.8
20	35717997	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.117647
20	35719264	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0384615
20	35719269	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0392157
20	35719457	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.109091
20	35719485	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0689655
20	35719497	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.06
20	35719601	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.2
20	35720577	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.208333
20	35720598	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.181818
20	35720647	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.129032
20	35720725	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.047619
20	35720764	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0416667
20	35721034	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.125
20	35722218	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35723535	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.142857
20	35723537	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.733333
20	35723576	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35723984	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35724135	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0444444
20	35724166	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.133333
20	35724169	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.09375
20	35736685	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0704225
20	35736736	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0909091
20	35736740	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0740741
20	35736748	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0833333
20	35736756	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0833333
20	35736762	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35736791	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0769231
20	35736817	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.6
20	35736820	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0909091
20	35736846	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.111111
20	35736880	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.25
20	35737014	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.148936
20	35737015	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0638298
20	35737085	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0540541
20	35737108	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0434783
20	35737133	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.047619
20	35737135	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35737148	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0454545
20	35737303	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0357143
20	35737307	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.101449
20	35737308	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0298507
20	35737448	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.105263
20	35737478	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0952381
20	35737555	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.108108
20	35737618	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0384615
20	35738073	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.075
20	35738109	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0625
20	36576764	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.6
20	36576804	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.230769
20	36576805	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.230769
20	36576834	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
20	36610234	A->G	+	ENSG00000101084	RAB5IF	protein_coding	Intergenic	.	.	Alu	0.153846
20	36610636	A->G	+	ENSG00000101084	RAB5IF	protein_coding	Intergenic	.	.	Alu	0.111111
20	36914457	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36914762	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.3
20	36914789	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.545455
20	36914917	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36930489	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36934263	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.157895
20	38433194	A->G	-	ENSG00000196756	SNHG17	processed_transcript	Intergenic	.	.	Alu	0.3125
20	41035029	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.1
20	41038728	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41044921	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.1
20	41044927	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.105263
20	41052815	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.142857
20	41056504	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	41056531	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.1
20	41056622	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41056672	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41056691	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.153846
20	41056717	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.235294
20	43464692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
20	49185953	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.538462
20	49185974	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.142857
20	49690449	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.2
20	49690473	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.166667
20	49707690	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.09375
20	49707722	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.0909091
20	49707813	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.461538
20	49708162	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.333333
20	49708182	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.266667
20	49710971	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.2
20	49942703	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.111111
20	49942749	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.153846
20	50907794	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.142857
20	50907825	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0869565
20	50913059	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.235294
20	58314303	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.266667
20	60291074	A->G	+	ENSG00000228340	MIR646HG	lincRNA	Intergenic	.	.	Alu	0.454545
20	60291075	A->G	+	ENSG00000228340	MIR646HG	lincRNA	Intergenic	.	.	Alu	0.272727
20	62931140	A->G	-	ENSG00000101191	DIDO1	protein_coding	Intergenic	.	.	Alu	0.153846
21	14544189	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0740741
21	29028575	A->G	+	ENSG00000156256	USP16	protein_coding	Intergenic	.	.	Alu	0.181818
21	29055489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
21	29055568	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
21	29055600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
21	29055601	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
21	31726539	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.2
21	31726540	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.423077
21	31726541	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.115385
21	31726553	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.08
21	31726621	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.214286
21	31727150	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.142857
21	31727217	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.0952381
21	31727739	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.5
21	31727744	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.3
21	33231822	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33231876	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33360354	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
21	33406017	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0869565
21	33406883	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0869565
21	33407647	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.142857
21	33416972	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.133333
21	34794857	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.3
21	34794878	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.277778
21	34797939	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.2
21	34798000	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.166667
21	34854473	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.136364
21	34854502	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.1
21	34854509	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.368421
21	34854538	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.7
21	34867315	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.133333
21	34867383	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.166667
21	34871941	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0952381
21	34872103	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0444444
21	34874447	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.117647
21	35022650	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.1
21	35022660	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.444444
21	35022678	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.37037
21	35022712	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.125
21	35022715	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.384615
21	35023007	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.264706
21	35023010	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.636364
21	35023011	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.151515
21	35023081	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.4375
21	35023139	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.121212
21	35023140	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.272727
21	35023145	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0555556
21	35023157	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0588235
21	35023195	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.233333
21	35023216	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.148148
21	35023217	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0740741
21	35023239	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.133333
21	37375587	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.133333
21	37375589	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.5
21	37375643	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.6
21	37375690	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.3125
21	37375691	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.25
21	37375710	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.153846
21	37376255	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.08
21	37376388	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.166667
21	37376430	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.1875
21	37377232	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.117647
21	37377569	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0769231
21	39305938	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.2
21	39308238	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.2
21	39309111	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.111111
21	39311306	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.230769
21	43724580	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.181818
21	43724600	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.333333
21	43725759	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.181818
21	44019156	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.222222
21	44870297	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.2
21	44870329	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.2
21	46268922	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.833333
21	46268955	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.117647
21	46268975	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.8125
21	46322273	A->G	-	ENSG00000160298	C21orf58	protein_coding	Intergenic	.	.	Alu	0.0952381
22	17089694	A->G	+	ENSG00000177663	IL17RA	protein_coding	Intergenic	.	.	Alu	0.181818
22	17090233	A->G	+	ENSG00000177663	IL17RA	protein_coding	Intergenic	.	.	Alu	0.363636
22	17090238	A->G	+	ENSG00000177663	IL17RA	protein_coding	Intergenic	.	.	Alu	0.3
22	17662971	A->G	+	ENSG00000099968	BCL2L13	protein_coding	Intergenic	.	.	Alu	0.2
22	17662972	A->G	+	ENSG00000099968	BCL2L13	protein_coding	Intergenic	.	.	Alu	0.2
22	17662975	A->G	+	ENSG00000099968	BCL2L13	protein_coding	Intergenic	.	.	Alu	0.2
22	20513957	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.181818
22	20572663	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.4
22	20572681	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20573108	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.333333
22	20573177	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.25
22	20573230	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.117647
22	20573242	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.5
22	21575876	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.181818
22	21575881	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.166667
22	21579650	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.25
22	21617330	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.2
22	21617535	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.538462
22	21617544	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.214286
22	21618727	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.3
22	21801415	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.454545
22	21801420	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.545455
22	21842349	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.272727
22	21842350	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.272727
22	21845373	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.166667
22	21849836	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.181818
22	21853796	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	21853868	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	24042045	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.2
22	24042052	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.3
22	24042053	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.7
22	24173737	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.133333
22	24174228	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.105263
22	24174241	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.466667
22	24371959	A->G	+	ENSG00000100014	SPECC1L	protein_coding	Intergenic	.	.	Alu	0.3
22	25381066	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.2
22	25397514	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.25
22	25398024	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.4
22	26495031	A->G	+	ENSG00000100109	TFIP11	protein_coding	Intergenic	.	.	Alu	0.166667
22	26495062	A->G	+	ENSG00000100109	TFIP11	protein_coding	Intergenic	.	.	Alu	0.2
22	29281277	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.166667
22	29286101	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.181818
22	29287897	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.157895
22	29295130	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.133333
22	29297178	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0714286
22	29297186	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0714286
22	29499470	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
22	29501368	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
22	29501409	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
22	29501423	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
22	29501468	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
22	29502497	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
22	29502881	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
22	29502884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
22	29502889	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
22	29502894	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
22	29503621	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
22	29503642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
22	29503675	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
22	29505060	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
22	29505086	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
22	29505091	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
22	29505104	A->G	-	.	.	.	Intergenic	.	.	Alu	0.642857
22	29505105	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
22	29505443	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
22	29505444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
22	29505471	A->G	-	.	.	.	Intergenic	.	.	Alu	0.352941
22	29903533	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.4
22	30655211	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.2
22	30658955	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	1
22	31283699	A->G	+	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.166667
22	31331900	A->G	-	ENSG00000228839	PIK3IP1-AS1	antisense	Intergenic	.	.	Alu	0.181818
22	31435095	A->G	+	ENSG00000185721	DRG1	protein_coding	Intergenic	.	.	Alu	0.2
22	36345892	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.157895
22	36346705	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.2
22	36366025	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.181818
22	36371674	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36371675	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.153846
22	36372367	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.235294
22	36372406	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.15
22	36517778	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.357143
22	36517926	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.133333
22	36517927	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.2
22	36517930	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.214286
22	36518406	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.153846
22	37290715	A->G	+	ENSG00000100055	CYTH4	protein_coding	Intergenic	.	.	Alu	0.166667
22	37856589	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37856625	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.2
22	37872217	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.363636
22	37872218	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.333333
22	38210939	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.142857
22	38211002	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.1875
22	38502193	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.105263
22	38502362	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.1
22	38505025	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0952381
22	38505037	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.111111
22	38505047	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.153846
22	38711981	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.363636
22	39054296	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
22	39054332	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
22	39054361	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
22	40592779	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.3
22	40609048	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.25
22	40625656	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.230769
22	40630826	A->G	-	ENSG00000196588	MKL1	protein_coding	Intergenic	.	.	Alu	0.1875
22	40956580	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.272727
22	40962228	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.4
22	40962231	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.2
22	41100212	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.315789
22	41108378	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.25
22	41108484	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.214286
22	41141789	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.4
22	41463818	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.125
22	41463834	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.1
22	41476947	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.25
22	41623800	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.181818
22	41623801	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.363636
22	41624320	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.2
22	42516509	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.2
22	42517057	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.166667
22	42517169	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.2
22	42517196	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.272727
22	42579015	A->G	-	ENSG00000182841	RRP7BP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
22	42588793	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.2
22	42590456	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.2
22	42611271	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.25
22	42989398	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.181818
22	42989422	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.153846
22	43007415	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.166667
22	43013034	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.181818
22	49813417	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.181818
22	49819458	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.125
22	49860107	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.4
22	49861563	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.181818
22	49871339	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.2
22	49871375	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.4
1	100041804	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.25
1	100042720	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.125
1	100042790	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.142857
1	100042793	A->G	+	ENSG00000156875	MFSD14A	protein_coding	Intergenic	.	.	Alu	0.166667
1	100394392	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.181818
1	107854248	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.307692
1	107854253	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.272727
1	107855472	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.166667
1	107855473	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.166667
1	107891512	A->G	-	ENSG00000134215	VAV3	protein_coding	Intergenic	.	.	Alu	0.5
1	108755391	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.214286
1	109063550	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0444444
1	109063551	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0681818
1	109063993	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.1875
1	109063999	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0952381
1	109064033	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.107143
1	109064035	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.28
1	109064046	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.09375
1	109064089	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.25
1	110357546	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	110359999	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	112648763	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112648842	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.230769
1	112648843	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.214286
1	112655356	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112655392	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.4375
1	112655397	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.4375
1	112655588	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.1875
1	112655611	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	112655637	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112655663	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.117647
1	112655666	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.5
1	112655667	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.272727
1	112655692	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.266667
1	112655702	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.214286
1	112662235	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.2
1	112663606	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	112663895	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.461538
1	113938013	A->G	+	ENSG00000163349	HIPK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	113938717	A->G	+	ENSG00000163349	HIPK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	114566945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
1	114566955	A->G	-	.	.	.	Intergenic	.	.	Alu	0.529412
1	114567043	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
1	114567070	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	114578114	A->G	-	ENSG00000116752	BCAS2	protein_coding	Intergenic	.	.	Alu	0.2
1	114743294	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0857143
1	114744562	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0588235
1	114753804	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.1875
1	114754117	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0444444
1	114754194	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0714286
1	114754265	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.148148
1	114754266	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.12
1	115985693	A->G	+	ENSG00000163393	SLC22A15	protein_coding	Intergenic	.	.	Alu	0.181818
1	120955417	A->G	+	ENSG00000226067	LINC00623	lincRNA	Intergenic	.	.	Alu	0.571429
1	148426177	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.9
1	148427267	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.727273
1	148427321	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
1	148427322	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.9
1	149470403	A->G	+	ENSG00000271383	NBPF19	protein_coding	Intergenic	.	.	Alu	0.5
1	149887412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0619048
1	150570269	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.028169
1	150571326	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0588235
1	150571407	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
1	150571412	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0465116
1	150612592	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.037037
1	150613062	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0909091
1	150613116	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0833333
1	150613214	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0731707
1	150613222	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0465116
1	150618563	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.125
1	150618577	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150619099	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.230769
1	150619110	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.266667
1	150619119	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150619215	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150620953	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.428571
1	150621021	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.117647
1	150753858	A->G	-	ENSG00000163131	CTSS	protein_coding	Intergenic	.	.	Alu	0.181818
1	150753859	A->G	-	ENSG00000163131	CTSS	protein_coding	Intergenic	.	.	Alu	0.2
1	150930695	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	150930699	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	150930703	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	150993473	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.125
1	150994837	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.4
1	150994849	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.333333
1	150994850	A->G	-	ENSG00000143412	ANXA9	protein_coding	Intergenic	.	.	Alu	0.25
1	150996444	A->G	-	ENSG00000143409	MINDY1	protein_coding	Intergenic	.	.	Alu	0.214286
1	151434091	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151446568	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151447206	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.3
1	151452644	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.153846
1	151452701	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.3
1	151454884	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	153639831	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.107143
1	153639861	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0869565
1	153639866	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0869565
1	153639892	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0869565
1	153639913	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0869565
1	153639915	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.130435
1	153639931	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.133333
1	153639954	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.157895
1	153639957	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.190476
1	153639983	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.192308
1	153640035	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.15
1	153640241	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.142857
1	153640242	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.2
1	153640289	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.173913
1	153640297	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.142857
1	153640299	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.142857
1	153640317	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.222222
1	153640323	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.176471
1	153640380	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.166667
1	153640381	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.166667
1	153640518	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0909091
1	153640651	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.111111
1	153640683	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.166667
1	153640699	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.166667
1	153640720	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.153846
1	153640721	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.153846
1	153669613	A->G	-	ENSG00000143621	ILF2	protein_coding	Intergenic	.	.	Alu	0.0714286
1	153902579	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
1	153905254	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.363636
1	154161501	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.153846
1	154161503	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.153846
1	154162171	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.166667
1	154163055	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.133333
1	154165219	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.166667
1	154165299	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.105263
1	154173897	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.133333
1	154173898	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.142857
1	154174272	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.133333
1	154174291	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.2
1	154175992	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.2
1	155556289	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155556786	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.3
1	155556796	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155556886	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.555556
1	155556928	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.214286
1	155556929	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.357143
1	155556932	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.333333
1	155556933	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.285714
1	155559364	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.3
1	155559452	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.230769
1	155559453	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.153846
1	155559483	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155665598	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	155669809	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155669973	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155673682	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155680664	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.117647
1	155681583	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155682829	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155683404	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.25
1	155683414	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.214286
1	155683555	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0571429
1	155683612	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	155683622	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155684003	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.157895
1	155684004	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.157895
1	155684037	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.25
1	155900918	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.214286
1	155903829	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155904137	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155907325	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.2
1	155907336	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.2
1	155907360	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155907431	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.2
1	155907439	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155909186	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155973554	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.2
1	156116658	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.111111
1	156119463	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0740741
1	156119464	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.107143
1	156119482	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.09375
1	156120547	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.166667
1	156121980	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0833333
1	156125869	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.2
1	156214718	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.214286
1	156469325	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.15
1	156469422	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.181818
1	156471327	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.125
1	156474266	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.25
1	156474277	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.142857
1	156474337	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.166667
1	160258225	A->G	-	ENSG00000132716	DCAF8	protein_coding	Intergenic	.	.	Alu	0.2
1	161106973	A->G	-	ENSG00000143256	PFDN2	protein_coding	Intergenic	.	.	Alu	0.4
1	161106982	A->G	-	ENSG00000143256	PFDN2	protein_coding	Intergenic	.	.	Alu	0.2
1	162574162	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.2
1	162574167	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.230769
1	162574259	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	165830029	A->G	+	ENSG00000143179	UCK2	protein_coding	Intergenic	.	.	Alu	0.157895
1	165831150	A->G	+	ENSG00000143179	UCK2	protein_coding	Intergenic	.	.	Alu	0.166667
1	165914934	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	165914944	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	167243301	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.454545
1	167243302	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.7
1	167251265	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.153846
1	167251269	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.153846
1	167251292	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.3
1	167929196	A->G	-	ENSG00000143158	MPC2	protein_coding	Intergenic	.	.	Alu	0.153846
1	167929236	A->G	-	ENSG00000143158	MPC2	protein_coding	Intergenic	.	.	Alu	0.125
1	171487140	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.230769
1	171493713	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.176471
1	171500536	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.136364
1	171502823	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0833333
1	171502824	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.08
1	171502895	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.285714
1	171502897	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.15
1	171502903	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.15
1	171503282	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.416667
1	171503359	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
1	171547026	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.416667
1	173858655	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
1	173858712	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	173858742	A->G	+	.	.	.	Intergenic	.	.	Alu	1
1	173858743	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
1	173859124	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	173859744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	173859819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
1	173859825	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
1	173861970	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
1	173861972	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
1	173861973	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
1	173862351	A->G	-	.	.	.	Intergenic	.	.	Alu	0.388889
1	173862392	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	173862695	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	173863138	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
1	173863142	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
1	174009775	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.125
1	174012087	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
1	174012169	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.142857
1	176020462	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	179889758	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	180828112	A->G	+	ENSG00000143324	XPR1	protein_coding	Intergenic	.	.	Alu	0.2
1	182863970	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.133333
1	182863971	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.133333
1	182863987	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.166667
1	182863996	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.153846
1	182864281	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.142857
1	182872067	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.117647
1	184958888	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.294118
1	184958893	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.35
1	184969804	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.15
1	184969811	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.409091
1	184969903	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.0689655
1	184969969	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.151515
1	184969974	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.129032
1	193095423	A->G	-	ENSG00000023572	GLRX2	protein_coding	Intergenic	.	.	Alu	0.2
1	193095426	A->G	-	ENSG00000023572	GLRX2	protein_coding	Intergenic	.	.	Alu	0.153846
1	193095843	A->G	-	ENSG00000023572	GLRX2	protein_coding	Intergenic	.	.	Alu	0.133333
1	193095911	A->G	-	ENSG00000023572	GLRX2	protein_coding	Intergenic	.	.	Alu	0.142857
1	197759032	A->G	-	ENSG00000224901	AL365258.1	antisense	Intergenic	.	.	Alu	0.153846
1	197759037	A->G	-	ENSG00000224901	AL365258.1	antisense	Intergenic	.	.	Alu	0.153846
1	198679336	A->G	+	ENSG00000236278	PEBP1P3	processed_pseudogene	Intergenic	.	.	Alu	0.3
1	198680267	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.25
1	201961140	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.153846
1	201961590	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.3
1	202769647	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.363636
1	202876817	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
1	202876854	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
1	202876869	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	202876870	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
1	202877538	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	202877563	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	202877567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	202877631	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
1	202877687	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
1	203009568	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.25
1	203009594	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203022168	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203022169	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.142857
1	203022234	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.347826
1	203022238	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.217391
1	203022580	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.181818
1	203022628	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.142857
1	203810489	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.333333
1	203810586	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.266667
1	203810682	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.166667
1	203811020	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.181818
1	203811021	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.181818
1	203830646	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.285714
1	203830750	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.363636
1	203830761	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.363636
1	203832128	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.166667
1	204402621	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.181818
1	204518804	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.2
1	204526670	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.384615
1	204526685	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.142857
1	204526725	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.222222
1	204526737	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0869565
1	204534513	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.25
1	204534536	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.136364
1	204534588	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0967742
1	204534600	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.347826
1	204534605	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	204534617	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.125
1	204534653	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.230769
1	204535633	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.2
1	204535650	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.363636
1	204535698	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.416667
1	204535716	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.181818
1	204536006	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.133333
1	204536007	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.333333
1	204536012	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.357143
1	204536042	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.5
1	204536204	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.142857
1	205174938	A->G	-	ENSG00000133059	DSTYK	protein_coding	Intergenic	.	.	Alu	0.142857
1	205174940	A->G	-	ENSG00000133059	DSTYK	protein_coding	Intergenic	.	.	Alu	0.125
1	205736169	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.2
1	205736566	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.2
1	205736568	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.5
1	205736632	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.4
1	211264037	A->G	+	ENSG00000117625	RCOR3	protein_coding	Intergenic	.	.	Alu	0.411765
1	211264085	A->G	+	ENSG00000117625	RCOR3	protein_coding	Intergenic	.	.	Alu	0.105263
1	211264099	A->G	+	ENSG00000117625	RCOR3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	217603842	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.166667
1	217603850	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.25
1	217603869	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.2
1	217603898	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.2
1	217604121	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.176471
1	217604185	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.666667
1	217604187	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.583333
1	217604269	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.375
1	217604304	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.166667
1	217604815	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.181818
1	222714794	A->G	+	ENSG00000162819	BROX	protein_coding	Intergenic	.	.	Alu	0.4
1	223790109	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.2
1	223790410	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	223790436	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	223790442	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.411765
1	223790449	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	223790471	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.235294
1	223790742	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.6
1	223790886	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.2
1	223790887	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.2
1	223791182	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.2
1	223843309	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	223843335	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.153846
1	224117307	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.272727
1	224118185	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.230769
1	224118186	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.153846
1	224136017	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.2
1	224136881	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.25
1	224184790	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.125
1	224399889	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.181818
1	224413921	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.181818
1	224414729	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.166667
1	225787033	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.272727
1	225788288	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.2
1	225788331	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.363636
1	225788349	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.7
1	225982463	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	225982511	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	225982519	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	225986136	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.111111
1	225987246	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.133333
1	225993867	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.153846
1	225997527	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.111111
1	225997578	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.075
1	225997590	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.0555556
1	225997594	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.2
1	225997673	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.206897
1	225997691	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.0967742
1	225997697	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.08
1	225997896	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.15
1	225997964	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.2
1	225997970	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.142857
1	225997992	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.277778
1	225998044	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.176471
1	225998089	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.15
1	226067661	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.08
1	226173160	A->G	-	ENSG00000182827	ACBD3	protein_coding	Intergenic	.	.	Alu	0.181818
1	234953094	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	234953122	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
1	234953186	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	234953190	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
1	234953945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
1	234953946	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	234953951	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
1	234956377	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
1	234956453	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	234956454	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
1	234956488	A->G	-	.	.	.	Intergenic	.	.	Alu	0.411765
1	235115076	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.142857
1	235115385	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.1
1	235116238	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.136364
1	235116417	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.125
1	235118771	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.0645161
1	235124231	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.166667
1	235125959	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.111111
1	235126350	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.333333
1	235126403	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.111111
1	235126548	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.166667
1	235126570	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.0740741
1	235126623	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.1
1	235126640	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.233333
1	235153629	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.2
1	235284313	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1875
1	235306339	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.285714
1	235306355	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.214286
1	235306381	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235306776	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.272727
1	235311691	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1
1	235313197	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235313198	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235313205	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235313206	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.08
1	235313257	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.222222
1	235684689	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.166667
1	235684711	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.181818
1	235684721	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.166667
1	235754311	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.153846
1	235754325	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.181818
1	235754354	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.166667
1	235754408	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.133333
1	235754856	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.2
1	235754910	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.181818
1	235755222	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.7
1	235755225	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.615385
1	235755313	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.181818
1	235826797	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0246914
1	235826806	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0344828
1	235826877	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.02
1	235826901	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0526316
1	235827257	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.12963
1	235827331	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0377358
1	235827355	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0740741
1	235861748	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.318182
1	235861787	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.384615
1	235862578	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.2
1	235862633	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.166667
1	235863203	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.105263
1	235863280	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.153846
1	235863347	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.105263
1	236527836	A->G	+	ENSG00000116977	LGALS8	protein_coding	Intergenic	.	.	Alu	0.2
1	236527933	A->G	+	ENSG00000116977	LGALS8	protein_coding	Intergenic	.	.	Alu	0.157895
1	236527950	A->G	+	ENSG00000116977	LGALS8	protein_coding	Intergenic	.	.	Alu	0.294118
1	236528686	A->G	+	ENSG00000116977	LGALS8	protein_coding	Intergenic	.	.	Alu	0.2
1	236529400	A->G	+	ENSG00000116977	LGALS8	protein_coding	Intergenic	.	.	Alu	0.3
1	236529461	A->G	+	ENSG00000116977	LGALS8	protein_coding	Intergenic	.	.	Alu	0.214286
1	236529462	A->G	+	ENSG00000116977	LGALS8	protein_coding	Intergenic	.	.	Alu	0.142857
1	243240866	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.181818
1	243240872	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.272727
1	243240911	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.133333
1	243240912	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.133333
1	243243596	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.2
1	243243620	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.3
1	243243635	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.166667
1	243244576	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.307692
1	243244689	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.125
1	243245631	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.0869565
1	243249163	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.08
1	243249169	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.0833333
1	243249293	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.296296
1	243249296	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.259259
1	243249306	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.1
1	243249318	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.2
1	243249356	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.142857
1	244421891	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.5
1	244421898	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.2
1	244421917	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.3
1	244974772	A->G	+	ENSG00000203666	EFCAB2	protein_coding	Intergenic	.	.	Alu	0.142857
1	246551664	A->G	-	ENSG00000162851	TFB2M	protein_coding	Intergenic	.	.	Alu	0.166667
1	246559497	A->G	-	ENSG00000162851	TFB2M	protein_coding	Intergenic	.	.	Alu	0.214286
1	246559502	A->G	-	ENSG00000162851	TFB2M	protein_coding	Intergenic	.	.	Alu	0.153846
1	246571248	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.2
1	246571249	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.181818
1	246922260	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	246922576	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	246930702	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	247155657	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.0869565
1	247155672	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.571429
1	247296476	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
1	247296482	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
1	247305188	A->G	-	ENSG00000162714	ZNF496	protein_coding	Intergenic	.	.	Alu	0.3
1	247427581	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.434783
1	247430792	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.7
1	247430836	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	247430860	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.272727
1	248741442	A->G	+	ENSG00000259823	LYPD8	protein_coding	Intergenic	.	.	Alu	0.2
2	101275215	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.125
2	101280912	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.176471
2	101280917	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.166667
2	101281028	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.333333
2	101284469	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.142857
2	101284498	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.533333
2	101287239	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.2
2	101297562	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.181818
2	101307406	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.142857
2	101472975	A->G	-	ENSG00000196460	RFX8	protein_coding	Intergenic	.	.	Alu	0.2
2	101713003	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.153846
2	101713033	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.357143
2	101713125	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.25
2	105748443	A->G	+	ENSG00000071051	NCK2	protein_coding	Intergenic	.	.	Alu	0.2
2	108455284	A->G	+	ENSG00000135968	GCC2	protein_coding	Intergenic	.	.	Alu	0.2
2	108544595	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
2	108723457	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108737612	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.454545
2	108738728	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	108738729	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0540541
2	108738732	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0555556
2	108738768	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0588235
2	108738795	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
2	108738830	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.176471
2	108739246	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.1875
2	108742443	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.172414
2	108742486	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
2	108742511	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.354839
2	108742547	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0882353
2	108742566	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0588235
2	108742850	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.148148
2	108742869	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
2	108742906	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	108742918	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.107143
2	108742996	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.173913
2	108744257	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.105263
2	108744345	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	112409538	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.166667
2	112410588	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.117647
2	112654718	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	112654719	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	112654724	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	112654734	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	112654811	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	112654846	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.307692
2	112655134	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	112655135	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	112655149	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.136364
2	112655221	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.173913
2	113707568	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.117647
2	113707575	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.157895
2	113707576	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.105263
2	113707632	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.538462
2	113707656	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.133333
2	113707657	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.4
2	113707724	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.35
2	113707729	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0952381
2	113708548	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.117647
2	113708562	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.176471
2	113708578	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0714286
2	113708582	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0666667
2	113708594	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0625
2	113708606	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.151515
2	113708623	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0625
2	113708687	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0740741
2	113708692	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.647059
2	113708698	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.6875
2	113708721	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.625
2	113710015	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0882353
2	113710053	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0882353
2	113710062	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.375
2	113710467	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	113710508	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.166667
2	113710509	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.416667
2	113710538	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.117647
2	113710547	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113710564	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0833333
2	113710567	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.16129
2	113710591	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.129032
2	113710608	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.105263
2	113710617	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.102564
2	113710654	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.15625
2	113710681	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.233333
2	113710693	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.125
2	113710694	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0625
2	113710699	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0606061
2	113710726	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.230769
2	113710732	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.125
2	113710748	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.285714
2	113712428	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.210526
2	113712588	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.263158
2	113749257	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113749284	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.176471
2	113749328	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.5
2	113749414	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.294118
2	113749417	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.352941
2	113751033	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	120220722	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0344828
2	127334037	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.416667
2	127334066	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.25
2	127368239	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.142857
2	127375588	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127377042	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.266667
2	127802886	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.214286
2	130158008	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.272727
2	130158024	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.583333
2	130158058	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.181818
2	130159035	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.4
2	130159093	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.181818
2	130159123	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.25
2	130159127	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.375
2	130159165	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.125
2	130159167	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.125
2	130159176	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.214286
2	130159219	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.2
2	130169696	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.25
2	131080496	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131080505	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131089104	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.214286
2	131089159	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.266667
2	131089169	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.142857
2	131090910	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131090911	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131090949	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.1875
2	131090951	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.1875
2	131090959	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.4375
2	131090964	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.125
2	131109860	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.153846
2	131110475	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.133333
2	131110476	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.3125
2	131110488	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.333333
2	131110571	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.181818
2	131110595	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.111111
2	131113195	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	131113287	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.111111
2	131113293	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.107143
2	131115557	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.125
2	131501801	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	1
2	131503946	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.153846
2	131505928	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
2	131513514	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.363636
2	131513528	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3
2	131513592	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131513593	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131513824	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
2	131513862	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.214286
2	131513866	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.5
2	131513870	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.142857
2	131513896	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.117647
2	131513897	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.176471
2	131513929	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3125
2	131513940	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.428571
2	131513959	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
2	131514936	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131514970	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.7
2	134928176	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.153846
2	135068633	A->G	+	ENSG00000115839	RAB3GAP1	protein_coding	Intergenic	.	.	Alu	0.2
2	135751326	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	135751370	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	135760197	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.2
2	135760271	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.727273
2	135760272	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.454545
2	135760275	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.181818
2	135760323	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.181818
2	138584188	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	138584234	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
2	143301084	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.235294
2	143301095	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.2
2	143318213	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.181818
2	143318268	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.0909091
2	143502218	A->G	+	ENSG00000257640	AC096558.2	antisense	Intergenic	.	.	Alu	0.4
2	143502289	A->G	+	ENSG00000257640	AC096558.2	antisense	Intergenic	.	.	Alu	0.4
2	143502680	A->G	+	ENSG00000257640	AC096558.2	antisense	Intergenic	.	.	Alu	0.133333
2	143502815	A->G	+	ENSG00000257640	AC096558.2	antisense	Intergenic	.	.	Alu	0.2
2	143502832	A->G	+	ENSG00000257640	AC096558.2	antisense	Intergenic	.	.	Alu	0.181818
2	143604930	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.5
2	143605042	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.272727
2	144328163	A->G	-	ENSG00000121964	GTDC1	protein_coding	Intergenic	.	.	Alu	0.4
2	144409855	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.230769
2	144420264	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.111111
2	144420308	A->G	-	ENSG00000169554	ZEB2	protein_coding	Intergenic	.	.	Alu	0.08
2	148647407	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.1
2	148654527	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.1
2	148654531	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.1
2	148654551	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	151418271	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.153846
2	151418274	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.153846
2	151418291	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.454545
2	151418298	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.583333
2	151418394	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.333333
2	151418807	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	151418827	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	151421612	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.25
2	151421615	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.190476
2	151421648	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.111111
2	151421684	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.133333
2	151422580	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.125
2	151422600	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.230769
2	151422632	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.181818
2	152709853	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.3
2	152709917	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.266667
2	156516608	A->G	+	ENSG00000115159	GPD2	protein_coding	Intergenic	.	.	Alu	0.454545
2	159715531	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.3
2	159716503	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.117647
2	159730089	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
2	159730983	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.142857
2	159731026	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.133333
2	159731103	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.272727
2	159731107	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
2	161166778	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0833333
2	161167762	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.121212
2	161167765	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0645161
2	161167815	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.333333
2	161167898	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.176471
2	161167901	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.176471
2	161168575	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.1875
2	161168578	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.266667
2	161168583	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.176471
2	161168646	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0869565
2	161168671	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.2
2	161168672	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.24
2	161168677	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.173913
2	161168713	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.166667
2	161168775	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.4
2	161323476	A->G	+	ENSG00000115233	PSMD14	protein_coding	Intergenic	.	.	Alu	0.3
2	168479665	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.181818
2	168479673	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.166667
2	168479869	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.153846
2	168479870	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.230769
2	168481160	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.363636
2	168481161	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.272727
2	168481167	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.181818
2	168481204	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.384615
2	168481228	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.142857
2	168481294	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.692308
2	168675078	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.7
2	168675378	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.181818
2	168675383	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.181818
2	168675384	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.181818
2	168675386	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.25
2	168675435	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.142857
2	168675455	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.461538
2	168675465	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.428571
2	168675471	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.181818
2	168675506	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.272727
2	168675535	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.307692
2	168675870	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.181818
2	168714752	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.272727
2	168728567	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.2
2	168728951	A->G	+	ENSG00000172292	CERS6	protein_coding	Intergenic	.	.	Alu	0.454545
2	169803339	A->G	+	ENSG00000138385	SSB	protein_coding	Intergenic	.	.	Alu	0.214286
2	169803342	A->G	+	ENSG00000138385	SSB	protein_coding	Intergenic	.	.	Alu	0.214286
2	169835541	A->G	+	ENSG00000144357	UBR3	protein_coding	Intergenic	.	.	Alu	0.2
2	170946091	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.166667
2	170946220	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.2
2	170946279	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	170952745	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.388889
2	170952755	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.333333
2	170953194	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	171005623	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	171749374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
2	171928948	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.454545
2	171928955	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.363636
2	171930231	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.25
2	171930284	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.153846
2	171930359	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.166667
2	171930668	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.3
2	172575989	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	172576005	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.333333
2	172576032	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	173921478	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.230769
2	173932825	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.166667
2	173932892	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.153846
2	174375919	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.166667
2	174376059	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.4
2	175158323	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.272727
2	175158341	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.181818
2	175944995	A->G	-	ENSG00000144320	LNPK	protein_coding	Intergenic	.	.	Alu	0.5
2	175944996	A->G	-	ENSG00000144320	LNPK	protein_coding	Intergenic	.	.	Alu	0.428571
2	175945020	A->G	-	ENSG00000144320	LNPK	protein_coding	Intergenic	.	.	Alu	0.214286
2	175945027	A->G	-	ENSG00000144320	LNPK	protein_coding	Intergenic	.	.	Alu	0.214286
2	177248999	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.181818
2	177249049	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.142857
2	177249051	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.285714
2	177249098	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.230769
2	177249108	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.1875
2	178434134	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.192308
2	178434210	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.0740741
2	178434211	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.142857
2	178434223	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.52
2	178434240	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.235294
2	178434250	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.222222
2	178434277	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.2
2	178434291	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.263158
2	178434294	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.166667
2	178434300	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.421053
2	178434308	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.2
2	178434385	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.1875
2	178434504	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.0769231
2	178434557	A->G	-	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.2
2	178435021	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.142857
2	178435095	A->G	-	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.125
2	178435119	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.0526316
2	178435151	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.0454545
2	178437941	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.111111
2	178437950	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.130435
2	178438733	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.12
2	178438778	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.1
2	179247639	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.2
2	179259267	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.08
2	179259342	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.2
2	179259412	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.181818
2	179260502	A->G	-	ENSG00000187231	SESTD1	protein_coding	Intergenic	.	.	Alu	0.142857
2	186501816	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.0952381
2	186501829	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.3125
2	186502159	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.0909091
2	186502168	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.541667
2	186502169	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.272727
2	186502185	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.0909091
2	186502195	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.181818
2	186502208	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.0952381
2	186502252	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.181818
2	186502316	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.363636
2	186502327	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.25
2	186502335	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.166667
2	186502348	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.133333
2	191011516	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.333333
2	191011527	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	191011557	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.238095
2	191011978	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.142857
2	191012168	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0526316
2	191012196	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.138889
2	191012221	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.384615
2	191012329	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.178571
2	191012333	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.172414
2	191012334	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.172414
2	191012353	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.233333
2	191012408	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.214286
2	195664967	A->G	+	ENSG00000196950	SLC39A10	protein_coding	Intergenic	.	.	Alu	0.181818
2	196141471	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.461538
2	196141537	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.285714
2	196141547	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.272727
2	196141576	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.227273
2	196141577	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.136364
2	196141643	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.411765
2	196141649	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.368421
2	196141651	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.47619
2	196142150	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.25
2	196142151	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.105263
2	196142187	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.117647
2	196142197	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.162162
2	196142223	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0606061
2	196142246	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0789474
2	196142289	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0967742
2	196142308	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0689655
2	196142309	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0689655
2	196158817	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0483871
2	196158822	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0727273
2	196158863	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.1
2	196159378	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.031746
2	196159408	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.116667
2	196161745	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.025974
2	197414835	A->G	-	ENSG00000115524	SF3B1	protein_coding	Intergenic	.	.	Alu	0.142857
2	197414882	A->G	-	ENSG00000115524	SF3B1	protein_coding	Intergenic	.	.	Alu	0.130435
2	197471217	A->G	+	ENSG00000115520	COQ10B	protein_coding	Intergenic	.	.	Alu	0.181818
2	197491921	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.153846
2	197491946	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.153846
2	197492001	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.1
2	197492075	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.172414
2	197492465	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.142857
2	197492862	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.153846
2	197492888	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.176471
2	199801404	A->G	-	ENSG00000226124	FTCDNL1	protein_coding	Intergenic	.	.	Alu	0.153846
2	199801435	A->G	-	ENSG00000226124	FTCDNL1	protein_coding	Intergenic	.	.	Alu	0.181818
2	199801464	A->G	-	ENSG00000226124	FTCDNL1	protein_coding	Intergenic	.	.	Alu	0.2
2	199801592	A->G	-	ENSG00000226124	FTCDNL1	protein_coding	Intergenic	.	.	Alu	0.166667
2	199803548	A->G	-	ENSG00000226124	FTCDNL1	protein_coding	Intergenic	.	.	Alu	0.5
2	199803549	A->G	-	ENSG00000226124	FTCDNL1	protein_coding	Intergenic	.	.	Alu	0.272727
2	200819163	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	200819207	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.212121
2	200819719	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0789474
2	200819738	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0731707
2	200819798	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0555556
2	200852043	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
2	200852089	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
2	200856305	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0666667
2	200856312	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.103448
2	200856321	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.09375
2	201188951	A->G	+	ENSG00000003400	CASP10	protein_coding	Intergenic	.	.	Alu	0.363636
2	201189349	A->G	+	ENSG00000003400	CASP10	protein_coding	Intergenic	.	.	Alu	0.181818
2	201189500	A->G	+	ENSG00000003400	CASP10	protein_coding	Intergenic	.	.	Alu	0.2
2	201189849	A->G	+	ENSG00000003400	CASP10	protein_coding	Intergenic	.	.	Alu	0.214286
2	202234745	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.214286
2	202270574	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.08
2	202275733	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0666667
2	202275769	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0571429
2	202275786	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0833333
2	202275843	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.111111
2	202275931	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.25
2	202279726	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.25
2	202281239	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.08
2	202282997	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0952381
2	202284106	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
2	202284134	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.176471
2	202284941	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.117647
2	202290013	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.181818
2	202291696	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.3
2	202292136	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.117647
2	202292203	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.125
2	202296827	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0909091
2	202299021	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.210526
2	202299034	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0952381
2	202299140	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.3
2	203298331	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0625
2	203299017	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	203299620	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203299823	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	203299824	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	203300670	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.380952
2	203300703	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203300713	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.08
2	203300729	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0625
2	203300730	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0625
2	203300732	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0645161
2	203300995	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203301301	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203301324	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	203301326	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.46
2	203301366	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.04
2	203301371	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203301383	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.175
2	203301393	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.135135
2	203301505	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203301506	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.454545
2	203301510	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203301518	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203301532	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.416667
2	203301533	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.833333
2	203301540	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203302006	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203302019	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203302026	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.363636
2	203302051	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.363636
2	203302068	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203302091	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203302106	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203302109	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203302123	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203302162	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203302259	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203302273	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.764706
2	203302275	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203302276	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.176471
2	203302284	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203302316	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.294118
2	203302719	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203302721	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3125
2	203302733	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	203302744	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.461538
2	203302773	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203302786	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203302793	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203302822	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.363636
2	203302823	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203302850	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203302854	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203302867	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203302873	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.294118
2	203302876	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.352941
2	203302890	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	203302951	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203302965	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.157895
2	203302968	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203303062	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.5
2	203303094	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303100	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303101	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.230769
2	203303130	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203303135	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203303140	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303188	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.428571
2	203303194	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.285714
2	203303202	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203303540	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	203304033	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.454545
2	203304034	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203304297	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	203304315	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.12
2	203304344	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	203304363	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.227273
2	203304364	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203304379	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.538462
2	203304382	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.208333
2	203304404	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.925926
2	203304486	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0857143
2	203304745	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.192308
2	203304774	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0645161
2	203304776	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0666667
2	203304822	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	203304829	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203304856	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.434783
2	203304868	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.08
2	203304911	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	203305270	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.416667
2	203305281	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203305330	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203305402	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.08
2	206052679	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.272727
2	206061231	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206073981	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.272727
2	206073982	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.181818
2	206076139	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.181818
2	206078748	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.272727
2	206078820	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.142857
2	206078844	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.105263
2	206078857	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.235294
2	206078910	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.181818
2	206079188	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.230769
2	206079197	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.181818
2	206079250	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.142857
2	206079252	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.583333
2	206079275	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.166667
2	210155330	A->G	-	ENSG00000144445	KANSL1L	protein_coding	Intergenic	.	.	Alu	0.15
2	216207949	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
2	216207957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	216208004	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
2	216208017	A->G	+	.	.	.	Intergenic	.	.	Alu	0.291667
2	216208018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
2	216208045	A->G	+	.	.	.	Intergenic	.	.	Alu	0.28
2	216208057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
2	216208098	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	216208101	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
2	216208890	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
2	216208972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
2	216209040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
2	216209045	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
2	218227455	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.153846
2	218227526	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.115385
2	218227527	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0714286
2	218232783	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.363636
2	218563837	A->G	-	ENSG00000135913	USP37	protein_coding	Intergenic	.	.	Alu	0.272727
2	218571641	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.166667
2	218572236	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.181818
2	218572606	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.2
2	223753981	A->G	-	ENSG00000152056	AP1S3	protein_coding	Intergenic	.	.	Alu	0.142857
2	223754008	A->G	-	ENSG00000152056	AP1S3	protein_coding	Intergenic	.	.	Alu	0.214286
2	223754020	A->G	-	ENSG00000152056	AP1S3	protein_coding	Intergenic	.	.	Alu	0.117647
2	223754021	A->G	-	ENSG00000152056	AP1S3	protein_coding	Intergenic	.	.	Alu	0.111111
2	224521634	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224521635	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224531173	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224531258	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224531264	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.181818
2	224531265	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.181818
2	224535311	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224580536	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	224580562	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224580575	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	224580640	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.157895
2	224581153	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.238095
2	224581247	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.157895
2	224581273	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224581352	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.125
2	224581605	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.444444
2	224581671	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.08
2	224581673	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224581685	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.08
2	224581705	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0714286
2	224581706	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0689655
2	224581728	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.227273
2	224582085	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224582102	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.3
2	229915061	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	229917860	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.130435
2	230715777	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.047619
2	230715881	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.0909091
2	230715883	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.111111
2	230716793	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.0789474
2	230716820	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.0666667
2	230720492	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.2
2	233205859	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233256841	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.166667
2	237704354	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	237705407	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.2
2	237705507	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	237706651	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	237706667	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.136364
2	237706705	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.272727
2	237706721	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.363636
2	237710033	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	237710034	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	237710129	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	237710963	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	238191028	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.25
2	238192510	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.142857
2	238196506	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.3
2	238196513	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.3
2	241623088	A->G	-	ENSG00000176946	THAP4	protein_coding	Intergenic	.	.	Alu	0.3
2	241623094	A->G	-	ENSG00000176946	THAP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	101584645	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.166667
3	101659200	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.181818
3	101663298	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.2
3	101668505	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.125
3	101680683	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
3	101680733	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
3	101684696	A->G	-	ENSG00000114391	RPL24	protein_coding	Intergenic	.	.	Alu	0.0740741
3	105849578	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.454545
3	113714369	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
3	113714402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
3	113714405	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
3	121833205	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.538462
3	121833226	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.357143
3	121833890	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.363636
3	125513132	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.25
3	125513177	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.285714
3	125514082	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.727273
3	125515788	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.181818
3	126458322	A->G	-	ENSG00000070476	ZXDC	protein_coding	Intergenic	.	.	Alu	0.142857
3	126465839	A->G	-	ENSG00000070476	ZXDC	protein_coding	Intergenic	.	.	Alu	0.133333
3	128057792	A->G	+	ENSG00000058262	SEC61A1	protein_coding	Intergenic	.	.	Alu	0.166667
3	128058632	A->G	+	ENSG00000058262	SEC61A1	protein_coding	Intergenic	.	.	Alu	0.153846
3	128730488	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128732683	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128737124	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.153846
3	128737598	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.133333
3	128739445	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.3
3	128739463	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128741857	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128741867	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.1
3	128741934	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.1
3	128744023	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.272727
3	128744025	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128744051	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.125
3	128744060	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128744063	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.111111
3	129155843	A->G	-	ENSG00000240682	ISY1	protein_coding	Intergenic	.	.	Alu	0.142857
3	129155859	A->G	-	ENSG00000240682	ISY1	protein_coding	Intergenic	.	.	Alu	0.5
3	129155860	A->G	-	ENSG00000240682	ISY1	protein_coding	Intergenic	.	.	Alu	0.166667
3	129155873	A->G	-	ENSG00000240682	ISY1	protein_coding	Intergenic	.	.	Alu	0.142857
3	129155924	A->G	-	ENSG00000240682	ISY1	protein_coding	Intergenic	.	.	Alu	0.5
3	129155925	A->G	-	ENSG00000240682	ISY1	protein_coding	Intergenic	.	.	Alu	0.5625
3	130872685	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	130872689	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.1
3	130872724	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.153846
3	131008411	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.2
3	132368777	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	132368815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	132368974	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5625
3	132368981	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	132369007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	132369015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	132369020	A->G	+	.	.	.	Intergenic	.	.	Alu	0.470588
3	132370574	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	132370706	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	132370732	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
3	132370749	A->G	+	.	.	.	Intergenic	.	.	Alu	0.75
3	132370750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.466667
3	132370811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	132678893	A->G	+	ENSG00000274810	NPHP3-ACAD11	protein_coding	Intergenic	.	.	Alu	0.2
3	132710756	A->G	-	ENSG00000113971	NPHP3	protein_coding	Intergenic	.	.	Alu	0.3
3	133579657	A->G	+	ENSG00000091527	CDV3	protein_coding	Intergenic	.	.	Alu	0.08
3	133579732	A->G	+	ENSG00000091527	CDV3	protein_coding	Intergenic	.	.	Alu	0.117647
3	133581233	A->G	+	ENSG00000091527	CDV3	protein_coding	Intergenic	.	.	Alu	0.08
3	133654980	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	134227785	A->G	-	ENSG00000163785	RYK	protein_coding	Intergenic	.	.	Alu	0.2
3	134227791	A->G	-	ENSG00000163785	RYK	protein_coding	Intergenic	.	.	Alu	0.3
3	134228208	A->G	-	ENSG00000163785	RYK	protein_coding	Intergenic	.	.	Alu	0.181818
3	134228209	A->G	-	ENSG00000163785	RYK	protein_coding	Intergenic	.	.	Alu	0.2
3	136170731	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.5
3	136331942	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.25
3	136331946	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.285714
3	136331961	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.227273
3	136331964	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.363636
3	136331978	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.409091
3	136733289	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136740535	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.153846
3	136744093	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.615385
3	136744126	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.545455
3	138643535	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
3	138643573	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
3	138643618	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
3	138643708	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
3	138643744	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
3	138643745	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
3	138643755	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
3	138643776	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
3	138643995	A->G	-	ENSG00000174715	PPIAP72	processed_pseudogene	Intergenic	.	.	Alu	0.181818
3	138643999	A->G	-	ENSG00000174715	PPIAP72	processed_pseudogene	Intergenic	.	.	Alu	0.166667
3	138832500	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.133333
3	138832705	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.363636
3	138832707	A->G	-	ENSG00000051382	PIK3CB	protein_coding	Intergenic	.	.	Alu	0.363636
3	140957532	A->G	+	ENSG00000114120	SLC25A36	protein_coding	Intergenic	.	.	Alu	0.2
3	140959225	A->G	+	ENSG00000114120	SLC25A36	protein_coding	Intergenic	.	.	Alu	0.166667
3	140959291	A->G	+	ENSG00000114120	SLC25A36	protein_coding	Intergenic	.	.	Alu	0.0588235
3	141490447	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.230769
3	141747734	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	141749050	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	141749112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
3	141749126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	141749152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.545455
3	141749158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
3	141882684	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.4
3	141882709	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.181818
3	141882745	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.181818
3	141883285	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.153846
3	141883288	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.153846
3	141883433	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.2
3	141885505	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.125
3	141885529	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.111111
3	141888702	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.318182
3	141888742	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.434783
3	141895375	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.181818
3	141897735	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.133333
3	141900886	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.2
3	141911548	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.181818
3	141911569	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.142857
3	143017833	A->G	+	ENSG00000163714	U2SURP	protein_coding	Intergenic	.	.	Alu	0.0952381
3	146543116	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.268293
3	148898389	A->G	+	ENSG00000240521	AC092979.1	antisense	Intergenic	.	.	Alu	0.318182
3	148898412	A->G	+	ENSG00000240521	AC092979.1	antisense	Intergenic	.	.	Alu	0.115385
3	148898443	A->G	+	ENSG00000240521	AC092979.1	antisense	Intergenic	.	.	Alu	0.24
3	148898447	A->G	+	ENSG00000240521	AC092979.1	antisense	Intergenic	.	.	Alu	0.307692
3	148900210	A->G	+	ENSG00000240521	AC092979.1	antisense	Intergenic	.	.	Alu	0.909091
3	148900263	A->G	+	ENSG00000240521	AC092979.1	antisense	Intergenic	.	.	Alu	0.230769
3	149002856	A->G	+	ENSG00000163754	GYG1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	150433860	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.153846
3	150433922	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.142857
3	150433939	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.272727
3	150434032	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.111111
3	150617343	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.5
3	150617346	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.2
3	150751181	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.363636
3	150751197	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.2
3	152285690	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.157895
3	152287107	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.111111
3	152287111	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.166667
3	152287165	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.230769
3	152307129	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.030303
3	152375547	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.153846
3	152378004	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.166667
3	152378054	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.55
3	152378099	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.206897
3	152378112	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.461538
3	152378127	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	152378773	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.333333
3	152378816	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.263158
3	152378817	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.421053
3	152378820	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.263158
3	152378899	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.315789
3	152378901	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.105263
3	152378913	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.111111
3	152378951	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.1
3	152378990	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.190476
3	152418411	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.2
3	152418463	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.315789
3	152418515	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.153846
3	152418539	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.111111
3	152418599	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.272727
3	152418797	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	152418923	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.3
3	155849783	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.2
3	155850288	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.2
3	155851158	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.166667
3	155881879	A->G	+	ENSG00000163655	GMPS	protein_coding	Intergenic	.	.	Alu	0.416667
3	155881884	A->G	+	ENSG00000163655	GMPS	protein_coding	Intergenic	.	.	Alu	0.2
3	155881988	A->G	+	ENSG00000163655	GMPS	protein_coding	Intergenic	.	.	Alu	0.363636
3	155882009	A->G	+	ENSG00000163655	GMPS	protein_coding	Intergenic	.	.	Alu	0.272727
3	155883103	A->G	+	ENSG00000163655	GMPS	protein_coding	Intergenic	.	.	Alu	0.3
3	158692895	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
3	158692913	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	158815037	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.230769
3	158815072	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	160218242	A->G	-	ENSG00000244040	IL12A-AS1	antisense	Intergenic	.	.	Alu	0.153846
3	160218299	A->G	-	ENSG00000244040	IL12A-AS1	antisense	Intergenic	.	.	Alu	0.230769
3	160218346	A->G	-	ENSG00000244040	IL12A-AS1	antisense	Intergenic	.	.	Alu	0.230769
3	160218376	A->G	-	ENSG00000244040	IL12A-AS1	antisense	Intergenic	.	.	Alu	0.181818
3	160413167	A->G	+	ENSG00000248710	AC079594.2	protein_coding	Intergenic	.	.	Alu	0.153846
3	160502650	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	169972662	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.117647
3	169986826	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.384615
3	170236242	A->G	+	ENSG00000163558	PRKCI	protein_coding	Intergenic	.	.	Alu	0.181818
3	170242812	A->G	+	ENSG00000163558	PRKCI	protein_coding	Intergenic	.	.	Alu	0.153846
3	171800402	A->G	-	ENSG00000075651	PLD1	protein_coding	Intergenic	.	.	Alu	0.181818
3	171800433	A->G	-	ENSG00000075651	PLD1	protein_coding	Intergenic	.	.	Alu	0.166667
3	171807281	A->G	-	ENSG00000075651	PLD1	protein_coding	Intergenic	.	.	Alu	0.142857
3	172051114	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172051183	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.037037
3	172051184	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0701754
3	172051223	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0625
3	172052184	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0882353
3	172052185	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.114286
3	172052312	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0571429
3	172052313	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0555556
3	172052325	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0625
3	172053543	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0606061
3	172053651	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0740741
3	172053652	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0769231
3	172053693	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.173913
3	172132523	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.166667
3	172136799	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0882353
3	172136800	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.25
3	172136820	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0882353
3	172136836	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0769231
3	172136837	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.230769
3	172136867	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.1
3	172136902	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
3	172136905	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172136927	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	172137453	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0689655
3	172137454	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0689655
3	172137509	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0689655
3	172137527	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0967742
3	172137535	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0666667
3	172137551	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0571429
3	172137552	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0540541
3	172137558	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0645161
3	172137571	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0967742
3	172145913	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.384615
3	172145914	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.307692
3	172145943	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.583333
3	172145953	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.416667
3	172145979	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.133333
3	172146022	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.26087
3	172146047	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.705882
3	172146087	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172147030	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.105263
3	172147044	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
3	172147052	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	172147056	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	172147130	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.25
3	172159027	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.15
3	172162057	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	172162070	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	172162188	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0909091
3	172162213	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0769231
3	172162222	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	172162226	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0869565
3	172163150	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.111111
3	172165118	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.105263
3	172165143	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.125
3	172165244	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0571429
3	172165245	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0571429
3	172165248	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0967742
3	172165272	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0625
3	172165278	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.193548
3	172165284	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0625
3	172166656	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	172252543	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.272727
3	172278871	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	172338811	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.173913
3	172338816	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.380952
3	172338817	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.3
3	172339398	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.272727
3	172339416	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.117647
3	172339443	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.588235
3	172339465	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.2
3	172339469	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.615385
3	172339504	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.0833333
3	172339508	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.26087
3	177165914	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	177167783	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	177167809	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.133333
3	177167835	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177167873	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	177170761	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	177173104	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	177188382	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.3
3	177190046	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.125
3	177190071	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.133333
3	177190456	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	177190590	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	179327028	A->G	+	ENSG00000121864	ZNF639	protein_coding	Intergenic	.	.	Alu	0.266667
3	179374182	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.363636
3	179374183	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.363636
3	179442771	A->G	-	ENSG00000114450	GNB4	protein_coding	Intergenic	.	.	Alu	0.3
3	180917019	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	180917800	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.117647
3	180917816	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.133333
3	180920677	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.1
3	180920678	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.105263
3	180920685	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.15
3	180920694	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.125
3	180920745	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0714286
3	180920779	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.0689655
3	180921114	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.105263
3	180921115	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	180921203	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.176471
3	180921206	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.105263
3	180921209	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.1
3	180947188	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	180949487	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.157895
3	180951126	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.4
3	180951148	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.3
3	182799947	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.111111
3	182800031	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.133333
3	182814116	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.454545
3	182814127	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.153846
3	182814327	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182871242	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	184318401	A->G	+	ENSG00000114867	EIF4G1	protein_coding	Intergenic	.	.	Alu	0.117647
3	185596474	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.2
3	185596478	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.2
3	185596514	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185596536	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.363636
3	185686165	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.272727
3	185756851	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.363636
3	185756853	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.272727
3	185757698	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.428571
3	185757741	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.3
3	185808368	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.25
3	185808420	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.5
3	190529310	A->G	+	ENSG00000196083	IL1RAP	protein_coding	Intergenic	.	.	Alu	0.363636
3	190529367	A->G	+	ENSG00000196083	IL1RAP	protein_coding	Intergenic	.	.	Alu	0.166667
3	190529368	A->G	+	ENSG00000196083	IL1RAP	protein_coding	Intergenic	.	.	Alu	0.25
3	193629014	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.157895
3	193629018	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.15
3	193629043	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.142857
3	194408293	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.5
3	194408294	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.2
3	195428585	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.391304
3	195428615	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.25
3	195428617	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.1875
3	195439017	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195520102	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.272727
3	195520107	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195520530	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.2
3	195520535	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.176471
3	195521203	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.272727
3	195983275	A->G	-	ENSG00000185485	SDHAP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
3	196052853	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.190476
3	196052856	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.1
3	196052902	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0833333
3	196052925	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.266667
3	196052933	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.133333
3	196056472	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.105263
3	196056532	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.166667
3	196057709	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.352941
3	196057743	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.1875
3	196057759	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.133333
3	196069082	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.2
3	196069083	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.05
3	196070503	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.125
3	196070504	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.5
3	196070525	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.125
3	196070695	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.4
3	196070713	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0833333
3	196070931	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.204082
3	196076056	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.235294
3	196077517	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0740741
3	196077747	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.153846
3	196079415	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.117647
3	196079490	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0869565
3	196079492	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.173913
3	196079502	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0833333
3	196079611	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.153846
3	196080376	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0909091
3	196080377	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.1
3	196080403	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.105263
3	196427569	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.25
3	196430292	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.153846
3	196430569	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.142857
3	196430586	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.2
3	196430632	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.125
3	196430661	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.117647
3	196477854	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.181818
3	196742193	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.142857
3	196742206	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.230769
3	196888041	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.25
3	196891890	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.3
3	196891891	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.272727
3	197538598	A->G	-	ENSG00000161267	BDH1	protein_coding	Intergenic	.	.	Alu	0.3
3	197613020	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
3	197951757	A->G	+	ENSG00000182899	RPL35A	protein_coding	Intergenic	.	.	Alu	0.103448
4	102342377	A->G	-	ENSG00000138821	SLC39A8	protein_coding	Intergenic	.	.	Alu	0.133333
4	102511403	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.115385
4	102511493	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.105263
4	102511529	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.117647
4	102512413	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0454545
4	102512453	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.166667
4	102512461	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0789474
4	102512475	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0606061
4	102512478	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0540541
4	102754624	A->G	-	ENSG00000109323	MANBA	protein_coding	Intergenic	.	.	Alu	0.2
4	102754780	A->G	-	ENSG00000109323	MANBA	protein_coding	Intergenic	.	.	Alu	0.230769
4	102791706	A->G	-	.	.	.	Intergenic	.	.	Alu	0.09375
4	102791771	A->G	-	.	.	.	Intergenic	.	.	Alu	0.121212
4	105152736	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.15
4	105154793	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0909091
4	105154945	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0909091
4	105157776	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.105263
4	105157938	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0869565
4	105157939	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.0869565
4	105161026	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.142857
4	105165165	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.2
4	105165193	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.2
4	105186217	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.142857
4	105421895	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.181818
4	105421921	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.307692
4	105421967	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.5
4	105421980	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.142857
4	105421991	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.133333
4	105470429	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.0769231
4	107712772	A->G	-	ENSG00000138801	PAPSS1	protein_coding	Intergenic	.	.	Alu	0.363636
4	107712773	A->G	-	ENSG00000138801	PAPSS1	protein_coding	Intergenic	.	.	Alu	0.181818
4	108623537	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.263158
4	108623539	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.35
4	108623567	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.125
4	108623616	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.130435
4	108626235	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.142857
4	108626398	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.166667
4	108626596	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.307692
4	108626604	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.153846
4	108626605	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.153846
4	108626984	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.294118
4	108626985	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.3125
4	108627062	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.166667
4	108627092	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.153846
4	108627146	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.2
4	108627171	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.384615
4	108627183	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.153846
4	108627713	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.3
4	108627716	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.2
4	109565950	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.6
4	118612037	A->G	+	ENSG00000260404	AC110079.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.266667
4	118694902	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.2
4	119299838	A->G	-	ENSG00000164096	C4orf3	protein_coding	Intergenic	.	.	Alu	0.666667
4	139019195	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.0909091
4	139020802	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.0740741
4	139021019	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.166667
4	139021240	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.0606061
4	139023022	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.2
4	139023080	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.125
4	139023088	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.117647
4	139023698	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.181818
4	139024661	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.0833333
4	139025619	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.333333
4	139025654	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.25
4	139025736	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.142857
4	139026301	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.230769
4	139033597	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.2
4	139033600	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.2
4	139033828	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.15
4	139037538	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.105263
4	139042726	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.125
4	139046042	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0232558
4	139046049	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.025641
4	139046129	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0350877
4	139046593	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.208333
4	139046644	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.05
4	139046650	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0487805
4	139046699	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
4	139046709	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.363636
4	139046745	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139046754	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139047266	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0392157
4	139047403	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0714286
4	139079000	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139079037	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0952381
4	139079102	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.1
4	139079110	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0952381
4	139079129	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.470588
4	139079146	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.210526
4	139079194	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139079202	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	139079743	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.3
4	139079746	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.4
4	139079800	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.333333
4	139079803	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.25
4	139079804	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139097413	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139122565	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.636364
4	139122569	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.727273
4	139122573	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.545455
4	139142826	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
4	139149489	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139149552	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139157494	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0952381
4	139160222	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0689655
4	139168820	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0666667
4	139168840	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0606061
4	139169613	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139169668	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.125
4	139170408	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0769231
4	139170442	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0555556
4	139170443	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0882353
4	139170457	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0588235
4	139170843	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.352941
4	139170844	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.222222
4	139170870	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.12
4	139170924	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0740741
4	139170925	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139170942	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.178571
4	139170950	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0540541
4	139171143	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0666667
4	139171170	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0645161
4	139171171	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0689655
4	139171315	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.117647
4	139171318	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0909091
4	139171673	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0606061
4	139171743	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0588235
4	139171837	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.203704
4	139171841	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.296296
4	139171842	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0384615
4	139171877	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0769231
4	139171878	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0444444
4	139171883	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0465116
4	139303610	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0714286
4	139303632	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.192308
4	139303639	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.0625
4	139303706	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.133333
4	139303937	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.166667
4	139304103	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.133333
4	139304117	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.214286
4	139304125	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.35
4	139339293	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.133333
4	139339313	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.153846
4	139339406	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.133333
4	139339417	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.230769
4	139339436	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.25
4	139340215	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.181818
4	139340247	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.2
4	139365730	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.153846
4	139383522	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.3
4	139383550	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.153846
4	139383571	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.142857
4	139400186	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.181818
4	140125730	A->G	-	ENSG00000196782	MAML3	protein_coding	Intergenic	.	.	Alu	0.2
4	145096749	A->G	-	ENSG00000164162	ANAPC10	protein_coding	Intergenic	.	.	Alu	0.25
4	145096822	A->G	-	ENSG00000164162	ANAPC10	protein_coding	Intergenic	.	.	Alu	0.111111
4	145166629	A->G	-	ENSG00000164164	OTUD4	protein_coding	Intergenic	.	.	Alu	0.181818
4	151105351	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.105263
4	151105405	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.117647
4	151105468	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.392857
4	151105536	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151105720	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.173913
4	151105767	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.117647
4	151105904	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.1
4	151106086	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.133333
4	151106094	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.117647
4	151106095	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.176471
4	151108186	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151108253	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.181818
4	151109490	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.190476
4	151109495	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.272727
4	151109519	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.133333
4	151109723	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
4	151109752	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.538462
4	151110684	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.125
4	151130365	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	152475370	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.2
4	152507985	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.166667
4	152518126	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.181818
4	152519109	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.142857
4	152519176	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.2
4	152519186	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.1875
4	153476514	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.5
4	153483577	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.142857
4	153483579	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.153846
4	153491765	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.133333
4	153491811	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.230769
4	153508912	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.3
4	165234887	A->G	+	ENSG00000109466	KLHL2	protein_coding	Intergenic	.	.	Alu	0.2
4	173328676	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.125
4	173328692	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.133333
4	173328974	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.272727
4	173329020	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.111111
4	173329060	A->G	-	ENSG00000248774	AC097534.1	antisense	Intergenic	.	.	Alu	0.176471
4	176325843	A->G	+	ENSG00000129128	SPCS3	protein_coding	Intergenic	.	.	Alu	0.25
4	176325844	A->G	+	ENSG00000129128	SPCS3	protein_coding	Intergenic	.	.	Alu	0.666667
4	177363806	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
4	177363809	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
4	177363925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
4	184781055	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.166667
4	184781072	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.117647
4	184781078	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	184781086	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	184781169	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.142857
4	184781179	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.363636
4	184822487	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0238095
4	184822494	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0285714
4	184822552	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0689655
4	184822571	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0842105
4	184822595	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0306122
4	184822644	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.035461
4	184822657	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0396825
4	184822704	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.020202
4	184822733	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0679612
4	184822821	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0615385
4	184822847	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0842105
4	184822867	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0769231
4	184822894	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0842105
4	184822908	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.141304
4	184823734	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0608696
4	184823775	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0571429
4	184823781	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.223881
4	184823792	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0535714
4	184824286	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0454545
5	100849537	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.105263
5	100851179	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.111111
5	100854394	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.133333
5	115846229	A->G	+	ENSG00000177879	AP3S1	protein_coding	Intergenic	.	.	Alu	0.272727
5	119305474	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	Intergenic	.	.	Alu	0.2
5	119305510	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	Intergenic	.	.	Alu	0.181818
5	122031445	A->G	+	ENSG00000151304	SRFBP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	122803937	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.615385
5	122803938	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.769231
5	122803955	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122804008	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.125
5	122804019	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.3125
5	122804024	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.333333
5	122804048	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.153846
5	122804054	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.153846
5	122804067	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.7
5	122804466	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.166667
5	122804499	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.818182
5	122805717	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122805718	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122807030	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122807031	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.454545
5	122807104	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.230769
5	122829419	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.583333
5	122829439	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.166667
5	126781111	A->G	+	ENSG00000113368	LMNB1	protein_coding	Intergenic	.	.	Alu	0.1875
5	126781155	A->G	+	ENSG00000113368	LMNB1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131159919	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0465116
5	131159954	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.108108
5	131160120	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	131160142	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.153846
5	131161551	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	131161556	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	131269885	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.133333
5	131269950	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131273585	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3
5	131273831	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131273847	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131278049	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.111111
5	131283755	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.111111
5	131285213	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	131287604	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131287657	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.272727
5	131287702	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3125
5	131288058	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131288062	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3
5	131288143	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.333333
5	131288144	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131288163	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.357143
5	131288179	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131289893	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.333333
5	131321447	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131682589	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.133333
5	131687266	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.25
5	131687352	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.2
5	131687392	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.533333
5	131697774	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.181818
5	131793314	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.3
5	132473613	A->G	-	ENSG00000197536	C5orf56	processed_transcript	Intergenic	.	.	Alu	1
5	132913622	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132916126	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132916129	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132939056	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132940905	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.1875
5	132941895	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132953114	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132961017	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.08
5	132961273	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.454545
5	132961278	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.565217
5	132961282	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132961420	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132961449	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0740741
5	133018088	A->G	-	ENSG00000155329	ZCCHC10	protein_coding	Intergenic	.	.	Alu	0.153846
5	133018471	A->G	-	ENSG00000155329	ZCCHC10	protein_coding	Intergenic	.	.	Alu	0.230769
5	133022559	A->G	-	ENSG00000155329	ZCCHC10	protein_coding	Intergenic	.	.	Alu	0.153846
5	134162155	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	134162199	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.1
5	134162308	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.117647
5	134162358	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.15
5	134162659	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	134162816	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.117647
5	134162819	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.2
5	134162964	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.380952
5	134163027	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	134163665	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.222222
5	134163666	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	134163703	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0689655
5	134163708	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	134169696	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	134193006	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.181818
5	134207322	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.277778
5	134207328	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.263158
5	134211207	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.08
5	134211548	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.25
5	134211659	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.166667
5	134211867	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.363636
5	134211900	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.0666667
5	134212025	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.423077
5	134212062	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.130435
5	134215677	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.125
5	134217277	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.1
5	134220276	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.133333
5	134220287	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.125
5	134221744	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.214286
5	134378040	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.157895
5	134378054	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.133333
5	134378090	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.4
5	134378401	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134379964	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.1
5	134381462	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	134381500	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.176471
5	134381864	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134392931	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	134392940	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
5	134393401	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	134393406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.833333
5	134393449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
5	134393451	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
5	134393466	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	134393531	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
5	134647722	A->G	-	ENSG00000152700	SAR1B	protein_coding	Intergenic	.	.	Alu	0.2
5	134742825	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.1
5	134742839	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.0869565
5	134742868	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.176471
5	134847845	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.363636
5	134847881	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.181818
5	134848101	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.181818
5	134848148	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.142857
5	134848154	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.111111
5	134848200	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.214286
5	134848208	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.117647
5	138512105	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.1
5	138514342	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0540541
5	138514351	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	138514507	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138517959	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	138517972	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.148148
5	138517985	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	138518126	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.153846
5	138518326	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.125
5	138518379	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.232558
5	138518388	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.047619
5	138518391	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.128205
5	138518393	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.153846
5	138525869	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.142857
5	138526635	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138531857	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138533005	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.1875
5	138533016	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.411765
5	138533050	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	138533077	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.238095
5	138533143	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.2
5	138533573	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.1
5	138533610	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.047619
5	138535115	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.1
5	138565790	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.333333
5	138565811	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.181818
5	138570282	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.193548
5	138570292	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.103448
5	138572968	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.153846
5	138572992	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.363636
5	138572993	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.454545
5	138573034	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.105263
5	138573060	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.125
5	138573075	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0714286
5	138573157	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.125
5	138573182	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0833333
5	138573208	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0740741
5	138573211	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0689655
5	138573317	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.157895
5	138573394	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.1
5	138573404	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.111111
5	138573442	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.115385
5	138573460	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.117647
5	138573478	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.235294
5	138573484	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.210526
5	138573503	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0952381
5	138573564	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.4
5	138573565	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.263158
5	139277096	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.59375
5	139277157	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.666667
5	139277164	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.157895
5	139277183	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.133333
5	139277200	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.352941
5	139277219	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.925926
5	139277244	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.0810811
5	139277245	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.236842
5	139277263	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.0526316
5	139277264	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.194444
5	139277265	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.333333
5	139277279	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.05
5	139277283	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.102564
5	139277974	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.2
5	139278016	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.473684
5	139278050	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.111111
5	139278059	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.157895
5	139278068	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.2
5	139278070	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.142857
5	139278078	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.2
5	139278079	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.15
5	139278086	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.55
5	139278134	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.235294
5	139278171	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.105263
5	139295917	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0714286
5	139295927	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.189189
5	139295928	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0540541
5	139297021	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.111111
5	139297093	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0833333
5	139301459	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.2
5	139302148	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0740741
5	139302197	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.111111
5	139302201	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.269231
5	139302202	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.259259
5	139303176	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0714286
5	139303241	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0909091
5	139303342	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.25
5	139303592	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.5
5	139321227	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.157895
5	139321627	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.291667
5	139321632	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0833333
5	139323773	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.157895
5	139323840	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0909091
5	139324363	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.352941
5	139324368	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.235294
5	139324380	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.111111
5	139324394	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.166667
5	139324456	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.166667
5	139324477	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.214286
5	139324555	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.153846
5	139328733	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.125
5	139328858	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.1875
5	139328884	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.2
5	139328885	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.142857
5	139334603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
5	139334665	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	139347990	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139564254	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.105263
5	139564283	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.1875
5	139566096	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.421053
5	139566136	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.111111
5	139566158	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.117647
5	139566281	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.105263
5	139566293	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.105263
5	139566464	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.392857
5	139566467	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.178571
5	139566512	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0909091
5	139566621	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0769231
5	139567164	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139570120	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.25
5	139570160	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.454545
5	139570210	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139572453	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.142857
5	139572750	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139572763	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139575832	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139575840	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.166667
5	140300301	A->G	-	ENSG00000113068	PFDN1	protein_coding	Intergenic	.	.	Alu	0.25
5	140300302	A->G	-	ENSG00000113068	PFDN1	protein_coding	Intergenic	.	.	Alu	0.181818
5	140406644	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	141610038	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.181818
5	141610041	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.384615
5	141610087	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.3
5	146497234	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.2
5	149488304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
5	149532527	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149532530	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.214286
5	149534674	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.111111
5	149534735	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149535806	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149541348	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	149541855	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.2
5	149547944	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0576923
5	149547967	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.09375
5	149547968	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0625
5	149547985	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0681818
5	149548008	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.08
5	149548064	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	149548322	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0344828
5	149548332	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.05
5	149548401	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.112903
5	149548491	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0638298
5	149548727	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.111111
5	149548766	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0588235
5	150741573	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.2
5	151271865	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
5	154863504	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.15
5	154866210	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.0769231
5	154866266	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.28
5	154866287	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.222222
5	154866301	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.352941
5	154866888	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.133333
5	157841483	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.363636
5	157841484	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	157841745	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.363636
5	157841830	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.2
5	157843423	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.230769
5	157845105	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	157847253	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	157850427	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.133333
5	157851034	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.157895
5	160110620	A->G	-	ENSG00000170234	PWWP2A	protein_coding	Intergenic	.	.	Alu	0.166667
5	169708762	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.2
5	169708785	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.125
5	169708799	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.111111
5	169708800	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.111111
5	169708812	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.125
5	169708830	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.368421
5	169708861	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.2
5	169709515	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.181818
5	169851858	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.363636
5	171394159	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.153846
5	171394268	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.190476
5	171395018	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	171395019	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	171395021	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.047619
5	171395100	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0576923
5	171395101	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0576923
5	171395393	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	171395439	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	171398584	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.142857
5	171398613	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	171398618	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.166667
5	171398637	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.52381
5	171398650	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.444444
5	171398980	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.125
5	171398992	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.333333
5	171399016	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.538462
5	171399017	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.230769
5	171399054	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.1875
5	171399070	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	171399379	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.117647
5	171399505	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.1
5	171401138	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.133333
5	171401148	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.368421
5	171401204	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.142857
5	171401205	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.153846
5	171401566	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	171401611	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.291667
5	171401664	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.142857
5	171409331	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	171409446	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	171409894	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0625
5	172116786	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	172186179	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.153846
5	172186191	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.230769
5	172186506	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	173067078	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.125
5	173067743	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.181818
5	173069428	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.3
5	176981736	A->G	-	ENSG00000087206	UIMC1	protein_coding	Intergenic	.	.	Alu	0.636364
5	176990944	A->G	-	ENSG00000087206	UIMC1	protein_coding	Intergenic	.	.	Alu	0.166667
5	177069617	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.6
5	177069670	A->G	+	ENSG00000113761	ZNF346	protein_coding	Intergenic	.	.	Alu	0.6
5	177612696	A->G	+	ENSG00000247679	AC139795.2	antisense	Intergenic	.	.	Alu	0.166667
5	179711241	A->G	+	ENSG00000127022	CANX	protein_coding	Intergenic	.	.	Alu	0.166667
5	179826762	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.214286
5	180010171	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	180010184	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	180033480	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.133333
5	180033590	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	180497152	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.181818
5	180497247	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.2
5	180497259	A->G	+	ENSG00000113300	CNOT6	protein_coding	Intergenic	.	.	Alu	0.125
5	181240784	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	181240884	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.1
6	107918580	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.4
6	107921651	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.181818
6	107928265	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.363636
6	107928291	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.214286
6	107955300	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.0952381
6	107955301	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.285714
6	107955309	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.470588
6	107955381	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.1
6	107955642	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.0952381
6	107955668	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.5
6	107955669	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.210526
6	107955719	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.357143
6	107955764	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.166667
6	107955774	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.166667
6	108237975	A->G	-	ENSG00000112335	SNX3	protein_coding	Intergenic	.	.	Alu	0.2
6	108255467	A->G	-	ENSG00000112335	SNX3	protein_coding	Intergenic	.	.	Alu	0.2
6	108993859	A->G	-	ENSG00000080546	SESN1	protein_coding	Intergenic	.	.	Alu	0.470588
6	110477221	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
6	110477222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
6	110477223	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
6	110477291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	110477327	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
6	110477332	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
6	110477746	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	110477830	A->G	+	.	.	.	Intergenic	.	.	Alu	0.407407
6	110879248	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.130435
6	110880049	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.0909091
6	110880056	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.15625
6	110882909	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.0952381
6	110886135	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.166667
6	110896704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
6	110896723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
6	110896740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.204545
6	110896777	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
6	110896814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
6	110896849	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0338983
6	110896850	A->G	+	.	.	.	Intergenic	.	.	Alu	0.031746
6	110896875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
6	110896918	A->G	+	.	.	.	Intergenic	.	.	Alu	0.043956
6	110896958	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
6	110897045	A->G	+	.	.	.	Intergenic	.	.	Alu	0.027027
6	110897046	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0405405
6	110897053	A->G	+	.	.	.	Intergenic	.	.	Alu	0.027027
6	110897091	A->G	+	.	.	.	Intergenic	.	.	Alu	0.027027
6	110897544	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
6	110897561	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0697674
6	110897654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
6	110897967	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
6	110900600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110968241	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	110969690	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
6	110969856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
6	110969859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
6	110969860	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
6	110969868	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110969885	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	110969890	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	110969895	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
6	110969946	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
6	110970958	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	110971002	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
6	110971019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.909091
6	117685541	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.166667
6	118928364	A->G	-	ENSG00000111877	MCM9	protein_coding	Intergenic	.	.	Alu	0.5
6	122414682	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	122414725	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.117647
6	122414743	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.25
6	122414755	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.166667
6	122441267	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	122441268	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	122466509	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.181818
6	135204319	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.25
6	135204322	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.384615
6	135204363	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0869565
6	135204373	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.208333
6	135204378	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0740741
6	135204379	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0769231
6	135204392	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.608696
6	135204399	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.125
6	135204492	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.111111
6	135204493	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.176471
6	135204503	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.142857
6	135204512	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0869565
6	135204537	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.1
6	135204538	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.238095
6	135204542	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0952381
6	135204874	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.1
6	135204898	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.09375
6	135204937	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.176471
6	135204988	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0952381
6	135204992	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.608696
6	135204999	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.521739
6	135206085	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.125
6	135206337	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.111111
6	135206575	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.105263
6	135207988	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.2
6	135207989	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.133333
6	135208001	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.111111
6	135208284	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.166667
6	135208299	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.153846
6	135208480	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.142857
6	135209253	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.105263
6	135209320	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0714286
6	135209334	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.228571
6	135209351	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.121212
6	135209363	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.121951
6	135209373	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0731707
6	135209391	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.0769231
6	135493931	A->G	-	ENSG00000135541	AHI1	protein_coding	Intergenic	.	.	Alu	0.142857
6	136256073	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
6	136256251	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	136543568	A->G	-	ENSG00000135525	MAP7	protein_coding	Intergenic	.	.	Alu	0.2
6	136544860	A->G	-	ENSG00000135525	MAP7	protein_coding	Intergenic	.	.	Alu	0.363636
6	136634970	A->G	-	ENSG00000234263	AL024508.1	antisense	Intergenic	.	.	Alu	0.117647
6	136635794	A->G	-	ENSG00000234263	AL024508.1	antisense	Intergenic	.	.	Alu	0.153846
6	136635831	A->G	-	ENSG00000234263	AL024508.1	antisense	Intergenic	.	.	Alu	0.2
6	136635839	A->G	-	ENSG00000234263	AL024508.1	antisense	Intergenic	.	.	Alu	0.2
6	136636692	A->G	-	ENSG00000234263	AL024508.1	antisense	Intergenic	.	.	Alu	0.230769
6	136786285	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0425532
6	136786308	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0526316
6	136786863	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.633333
6	136786869	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0606061
6	136786874	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.351351
6	136786898	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.047619
6	136789069	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.142857
6	136789114	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.333333
6	136789195	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.333333
6	136789199	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.25
6	136789228	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.16
6	137217967	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.107143
6	138686303	A->G	-	ENSG00000135540	NHSL1	protein_coding	Intergenic	.	.	Alu	0.181818
6	138686304	A->G	-	ENSG00000135540	NHSL1	protein_coding	Intergenic	.	.	Alu	0.181818
6	138688556	A->G	-	ENSG00000135540	NHSL1	protein_coding	Intergenic	.	.	Alu	0.307692
6	138688560	A->G	-	ENSG00000135540	NHSL1	protein_coding	Intergenic	.	.	Alu	0.181818
6	138688586	A->G	-	ENSG00000135540	NHSL1	protein_coding	Intergenic	.	.	Alu	0.2
6	138789705	A->G	+	ENSG00000024862	CCDC28A	protein_coding	Intergenic	.	.	Alu	0.454545
6	138789714	A->G	+	ENSG00000024862	CCDC28A	protein_coding	Intergenic	.	.	Alu	0.181818
6	138789769	A->G	+	ENSG00000024862	CCDC28A	protein_coding	Intergenic	.	.	Alu	0.7
6	138949642	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.181818
6	138978402	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.2
6	139141853	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.153846
6	139156260	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.3
6	139156281	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.272727
6	139156400	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.181818
6	142935981	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.142857
6	142936074	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.333333
6	147211189	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.153846
6	147211622	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.421053
6	147211699	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.0909091
6	147211716	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.1875
6	147216241	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	149501998	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
6	149502014	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
6	149502019	A->G	-	.	.	.	Intergenic	.	.	Alu	0.185185
6	149502030	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
6	149502059	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
6	149539666	A->G	-	ENSG00000131013	PPIL4	protein_coding	Intergenic	.	.	Alu	0.230769
6	149572718	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.25
6	149572736	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.214286
6	149572742	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.272727
6	149572755	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.230769
6	149572862	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.5
6	149572909	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149572927	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.153846
6	149573137	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.153846
6	149573185	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.153846
6	149573217	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.142857
6	149573230	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.230769
6	149573260	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.307692
6	149592818	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	149592874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	149592978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	149592986	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	149592996	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	149592997	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
6	149715306	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.166667
6	149751583	A->G	+	ENSG00000120265	PCMT1	protein_coding	Intergenic	.	.	Alu	0.2
6	154735600	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.125
6	154770825	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.181818
6	154774279	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.181818
6	154774361	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.142857
6	156799570	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.214286
6	156799577	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.230769
6	156799594	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.416667
6	156799616	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.5
6	156799687	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.25
6	156799713	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.133333
6	156799730	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.166667
6	156799752	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	156814196	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	156835807	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.111111
6	156835816	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.111111
6	156835843	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.125
6	156835846	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.230769
6	156835854	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.25
6	156835881	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.117647
6	156858648	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.363636
6	156979719	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.636364
6	156979724	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.9
6	157003920	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.2
6	157052820	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.214286
6	157052995	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.153846
6	158653386	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.2
6	159735265	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.2
6	159735278	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.677419
6	159735280	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	159735324	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	159735326	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.333333
6	159735341	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.545455
6	159735350	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.1
6	159735495	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.333333
6	159735496	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.5
6	159735559	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.416667
6	159735573	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.25
6	159735618	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.294118
6	159735622	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.111111
6	159742794	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.1
6	159743256	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.166667
6	159752013	A->G	+	ENSG00000285441	SOD2	protein_coding	Intergenic	.	.	Alu	0.105263
6	163422494	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.2
6	163422495	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.111111
6	163424836	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.181818
6	163443447	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.125
6	163462730	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.529412
6	169717197	A->G	-	ENSG00000130024	PHF10	protein_coding	Intergenic	.	.	Alu	0.2
6	170359313	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.272727
6	170359343	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.363636
7	100319247	A->G	-	ENSG00000214300	SPDYE3	protein_coding	Intergenic	.	.	Alu	0.2
7	100343528	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
7	100343531	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.818182
7	100343607	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.315789
7	100343661	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.235294
7	100343662	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.294118
7	100343829	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	100343859	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	100343873	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	100343896	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
7	100343967	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	100344020	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.176471
7	100344031	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
7	100375476	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.3
7	100375477	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.3
7	101824151	A->G	+	ENSG00000259294	AC005096.1	antisense	Intergenic	.	.	Alu	0.125
7	101963926	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.3
7	102075111	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.545455
7	102075119	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.166667
7	102075133	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.153846
7	102173272	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.166667
7	102173281	A->G	+	ENSG00000257923	CUX1	protein_coding	Intergenic	.	.	Alu	0.181818
7	102648003	A->G	-	ENSG00000267645	AC105052.3	protein_coding	Intergenic	.	.	Alu	0.2
7	102648015	A->G	-	ENSG00000267645	AC105052.3	protein_coding	Intergenic	.	.	Alu	0.214286
7	102648024	A->G	-	ENSG00000267645	AC105052.3	protein_coding	Intergenic	.	.	Alu	0.1875
7	102648025	A->G	-	ENSG00000267645	AC105052.3	protein_coding	Intergenic	.	.	Alu	0.1875
7	102648043	A->G	-	ENSG00000267645	AC105052.3	protein_coding	Intergenic	.	.	Alu	0.153846
7	103328579	A->G	-	ENSG00000105819	PMPCB	protein_coding	Intergenic	.	.	Alu	0.166667
7	104942295	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0714286
7	104943253	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.111111
7	105008667	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.133333
7	105028566	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.25
7	105029113	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0740741
7	105042048	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0952381
7	105042056	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.263158
7	105048095	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.117647
7	105048115	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105048116	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105048178	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0869565
7	105048226	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105049264	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
7	105071388	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.5
7	105071428	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.4
7	105368721	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.2
7	105538259	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.272727
7	106877042	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.1
7	106877044	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.105263
7	106880715	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.153846
7	106880805	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.1875
7	106880812	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.333333
7	106880881	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.166667
7	107074652	A->G	+	ENSG00000005249	PRKAR2B	protein_coding	Intergenic	.	.	Alu	0.166667
7	107075203	A->G	+	ENSG00000005249	PRKAR2B	protein_coding	Intergenic	.	.	Alu	0.181818
7	107089048	A->G	+	ENSG00000005249	PRKAR2B	protein_coding	Intergenic	.	.	Alu	0.181818
7	107089049	A->G	+	ENSG00000005249	PRKAR2B	protein_coding	Intergenic	.	.	Alu	0.272727
7	112154088	A->G	-	ENSG00000128512	DOCK4	protein_coding	Intergenic	.	.	Alu	0.133333
7	112343767	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.0869565
7	112343803	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.0740741
7	112343805	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.0740741
7	112343829	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.0769231
7	112343851	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.0869565
7	112345559	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.2
7	112345676	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.5
7	112345679	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.3
7	112454966	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.184211
7	112455116	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.1
7	112455292	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0769231
7	112455365	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.056338
7	112455374	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0327869
7	112455378	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0555556
7	112455406	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.102041
7	112455424	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.145833
7	112455435	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.1
7	112477433	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.133333
7	116869901	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.16
7	116869931	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.130435
7	116869933	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	116869973	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	116874969	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.0909091
7	116875686	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.333333
7	116876068	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.166667
7	116876129	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.333333
7	116876175	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.142857
7	116891567	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.181818
7	116989718	A->G	+	ENSG00000004866	ST7	protein_coding	Intergenic	.	.	Alu	0.2
7	116990041	A->G	+	ENSG00000004866	ST7	protein_coding	Intergenic	.	.	Alu	0.230769
7	116990080	A->G	+	ENSG00000004866	ST7	protein_coding	Intergenic	.	.	Alu	0.117647
7	127909587	A->G	+	ENSG00000197157	SND1	protein_coding	Intergenic	.	.	Alu	0.2
7	127909588	A->G	+	ENSG00000197157	SND1	protein_coding	Intergenic	.	.	Alu	0.3
7	127909666	A->G	+	ENSG00000197157	SND1	protein_coding	Intergenic	.	.	Alu	0.230769
7	127909667	A->G	+	ENSG00000197157	SND1	protein_coding	Intergenic	.	.	Alu	0.461538
7	128545228	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
7	128632147	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
7	128632166	A->G	+	.	.	.	Intergenic	.	.	Alu	0.769231
7	128632171	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
7	128653262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
7	128659187	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
7	128659194	A->G	+	.	.	.	Intergenic	.	.	Alu	0.075
7	128659212	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
7	128659224	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
7	128659240	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
7	128659252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.352941
7	128659276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.116279
7	128659296	A->G	+	.	.	.	Intergenic	.	.	Alu	0.06
7	128659356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
7	128659357	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
7	128659358	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
7	128659359	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
7	128659566	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
7	128659581	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
7	128659589	A->G	+	.	.	.	Intergenic	.	.	Alu	0.32
7	128659597	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
7	128659607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
7	128659617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.322581
7	128659707	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
7	128661209	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
7	128661234	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
7	128661289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
7	128661361	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
7	128661369	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
7	129057570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	129631299	A->G	+	ENSG00000106459	NRF1	protein_coding	Intergenic	.	.	Alu	0.375
7	129632065	A->G	+	ENSG00000106459	NRF1	protein_coding	Intergenic	.	.	Alu	0.181818
7	129632199	A->G	+	ENSG00000106459	NRF1	protein_coding	Intergenic	.	.	Alu	0.214286
7	129938646	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.125
7	129941407	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.1875
7	129943819	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	130954669	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0487805
7	130957827	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.03125
7	139071194	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139073099	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.25
7	139073133	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.272727
7	139073670	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.333333
7	139073737	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0952381
7	139078192	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.2
7	139090125	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.2
7	139102674	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.111111
7	139367155	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.142857
7	139379964	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.166667
7	139390361	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139393644	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139395853	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.357143
7	139395882	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.466667
7	139419632	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0588235
7	140461521	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.3
7	140462144	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.3
7	140462228	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.25
7	140464583	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.363636
7	140464622	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.272727
7	140465442	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140469083	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	140469137	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	140470834	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.214286
7	140470841	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	140471716	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	140475595	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140475602	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	140729152	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.181818
7	140729213	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140917544	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140917545	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	143290154	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.1875
7	143290160	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.125
7	143290161	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.1875
7	143299053	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.4375
7	143299101	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.25
7	143299102	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.4375
7	148870491	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.466667
7	148870500	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.352941
7	151500859	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.333333
7	151500862	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.333333
7	151500937	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.133333
7	151510844	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.0740741
7	151510861	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.0740741
7	152310357	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152405835	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152405840	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.4
7	152405908	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1875
7	152406351	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.307692
7	152408244	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152409026	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152409137	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.259259
7	152409206	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152409226	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152409234	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0740741
7	152409279	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152409286	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152413253	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152414061	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152415662	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.272727
7	152415710	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.3
7	152415797	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.15
7	152415836	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152417279	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152417283	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152417301	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152423338	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152424246	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0909091
7	152424643	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.117647
7	152424691	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152425514	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0566038
7	152430095	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152430663	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0606061
7	152430670	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152431409	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152432964	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.148148
7	152433026	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.157895
7	152433036	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0833333
7	156845677	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.153846
7	156845692	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.416667
7	156868291	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.285714
7	156868305	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.125
7	156868314	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.117647
7	157343092	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.105263
7	157343260	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.136364
7	157343340	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.214286
7	157344079	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.153846
7	157344230	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.142857
7	157344261	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.125
7	157344262	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.125
7	157351512	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.214286
7	157373005	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.04
7	158738200	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.727273
7	158738203	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.363636
7	158738226	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.307692
7	158738522	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.666667
7	158738557	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.529412
7	158738580	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.153846
7	158738619	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.153846
7	158738646	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.538462
7	158738647	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.538462
7	158738654	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158770914	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.25
7	158789390	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158790773	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.6
7	158790828	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158790845	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.454545
7	158792445	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158792446	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158792509	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.3
7	158823036	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.117647
7	158823110	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158823598	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.294118
7	158823599	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1875
8	100300157	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.352941
8	100304053	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.4
8	100304095	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.272727
8	100713652	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	100713773	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	100714539	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	100714667	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0588235
8	100716159	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.129032
8	100716160	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	100716212	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0517241
8	100716230	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0576923
8	100716236	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.150943
8	100716279	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.267857
8	100716314	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0350877
8	100716393	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0526316
8	100717113	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.210526
8	100717117	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0555556
8	100717148	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.128205
8	100717149	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.102564
8	100717215	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.153846
8	100717221	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0714286
8	100927293	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0444444
8	100928090	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.107143
8	100928098	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.153846
8	100928180	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0952381
8	100928233	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0909091
8	100928266	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0909091
8	100928681	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0645161
8	100929304	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.181818
8	100929305	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0909091
8	100929324	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.1
8	100929337	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.15625
8	100929338	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0645161
8	100929356	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.137931
8	100929419	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.111111
8	100930237	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0952381
8	100934513	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0882353
8	102371985	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102399550	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102407195	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.266667
8	102407207	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102407294	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.545455
8	102407298	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.153846
8	102407299	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.307692
8	102407384	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.230769
8	102407519	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.25
8	102407548	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.192308
8	102407554	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.12
8	102407600	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.290323
8	102407614	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.125
8	102407615	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.217391
8	102407641	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.0869565
8	102407697	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.0666667
8	102830361	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.133333
8	102851463	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.176471
8	102851473	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.111111
8	102851643	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.157895
8	102853318	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.117647
8	102853380	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.117647
8	102853450	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.166667
8	102853471	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.105263
8	102854419	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.307692
8	119830999	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.181818
8	120055173	A->G	+	ENSG00000254343	AC091563.1	lincRNA	Intergenic	.	.	Alu	0.111111
8	123033631	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.3
8	123353171	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.2
8	123378619	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.214286
8	123378620	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.142857
8	123378964	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.166667
8	123378965	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.166667
8	124478853	A->G	+	ENSG00000170881	RNF139	protein_coding	Intergenic	.	.	Alu	0.3
8	124478869	A->G	+	ENSG00000170881	RNF139	protein_coding	Intergenic	.	.	Alu	0.181818
8	124492249	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	0.1875
8	129910840	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	130002392	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.133333
8	130353625	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.1
8	130353626	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0666667
8	130353667	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.107143
8	130353687	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.25
8	130353704	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.105263
8	130353746	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.105263
8	130353748	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.166667
8	130353776	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.119048
8	130353788	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0851064
8	130353795	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.272727
8	130353814	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.08
8	130353819	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0714286
8	130353867	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.107143
8	130353949	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.307692
8	130353992	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	130353998	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.107143
8	130354025	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.148148
8	130354070	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.157895
8	130354091	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	130354119	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.333333
8	130354124	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.176471
8	130354954	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.047619
8	130354964	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0731707
8	131909350	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.214286
8	131909466	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.3
8	133279006	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.181818
8	133280714	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.2
8	134827114	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
8	134827144	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
8	134827168	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
8	134827287	A->G	-	.	.	.	Intergenic	.	.	Alu	0.208333
8	134827551	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
8	134827668	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
8	140620808	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	140620809	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	141304483	A->G	-	ENSG00000022567	SLC45A4	protein_coding	Intergenic	.	.	Alu	0.2
8	143294422	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.3125
8	143294483	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.105263
8	143294504	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.1
8	143294549	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.133333
8	143294550	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.133333
8	143294638	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.5
8	143294639	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.470588
8	143294845	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.59375
8	143294846	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.375
8	143294847	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.09375
8	143294860	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.111111
8	143295002	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.0952381
8	143295006	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.68
8	143295007	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.64
8	143295063	A->G	-	ENSG00000185730	ZNF696	protein_coding	Intergenic	.	.	Alu	0.84375
8	143319869	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.125
8	143319883	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.1
8	143319891	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.105263
8	143319900	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.15
8	143319915	A->G	+	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.454545
8	143319919	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.130435
8	143319952	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.1875
8	143319961	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.1875
8	143319967	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.142857
8	143320037	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.166667
8	143320539	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.181818
8	143320540	A->G	-	ENSG00000184428	TOP1MT	protein_coding	Intergenic	.	.	Alu	0.2
9	100023952	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.363636
9	100023992	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.2
9	104756903	A->G	+	ENSG00000136783	NIPSNAP3A	protein_coding	Intergenic	.	.	Alu	0.2
9	110052109	A->G	+	ENSG00000157654	PALM2-AKAP2	protein_coding	Intergenic	.	.	Alu	0.153846
9	110245979	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0357143
9	110245983	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0416667
9	110246003	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0666667
9	110246027	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0526316
9	110252717	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.047619
9	110252723	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.15
9	110252730	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.125
9	110252747	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0666667
9	110252760	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0512821
9	110252782	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0833333
9	110252783	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.0857143
9	110252827	A->G	-	ENSG00000136810	TXN	protein_coding	Intergenic	.	.	Alu	0.08
9	111473775	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.2
9	111479746	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.3
9	111479774	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.272727
9	111480501	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.272727
9	112036510	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intergenic	.	.	Alu	0.25
9	112036524	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intergenic	.	.	Alu	0.3
9	112036599	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intergenic	.	.	Alu	0.142857
9	112036609	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intergenic	.	.	Alu	0.111111
9	112036614	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intergenic	.	.	Alu	0.235294
9	112036615	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intergenic	.	.	Alu	0.5
9	112038616	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
9	112038653	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
9	112038775	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
9	112039349	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
9	112039353	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
9	112039355	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
9	112039377	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
9	112039463	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
9	112040209	A->G	-	.	.	.	Intergenic	.	.	Alu	0.147059
9	112040263	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
9	112040302	A->G	-	.	.	.	Intergenic	.	.	Alu	0.45
9	112040304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
9	112040314	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
9	112040326	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
9	112040343	A->G	-	.	.	.	Intergenic	.	.	Alu	0.789474
9	112040344	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
9	112040388	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
9	112313315	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.2
9	112328707	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.136364
9	112329330	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.153846
9	112329356	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.142857
9	112387384	A->G	+	ENSG00000119471	HSDL2	protein_coding	Intergenic	.	.	Alu	0.142857
9	112387400	A->G	+	ENSG00000119471	HSDL2	protein_coding	Intergenic	.	.	Alu	0.333333
9	112387403	A->G	+	ENSG00000119471	HSDL2	protein_coding	Intergenic	.	.	Alu	0.166667
9	112621889	A->G	+	ENSG00000165185	KIAA1958	protein_coding	Intergenic	.	.	Alu	0.105263
9	112621892	A->G	+	ENSG00000165185	KIAA1958	protein_coding	Intergenic	.	.	Alu	0.111111
9	112625389	A->G	+	ENSG00000165185	KIAA1958	protein_coding	Intergenic	.	.	Alu	0.107143
9	113154103	A->G	+	ENSG00000136867	SLC31A2	protein_coding	Intergenic	.	.	Alu	0.0952381
9	113170395	A->G	+	ENSG00000119321	FKBP15	protein_coding	Intergenic	.	.	Alu	0.2
9	114385081	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.2
9	114593733	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.2
9	114593877	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.230769
9	114595574	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.142857
9	122817268	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.4
9	124387134	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.0289855
9	125772838	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.133333
9	125774089	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.157895
9	125774152	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	125774162	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.214286
9	125783523	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.25
9	125783526	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	125784137	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	125784182	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.214286
9	125788648	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.3
9	125788671	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.153846
9	125788691	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.181818
9	125791606	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	125793559	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.153846
9	125799258	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	125799259	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.125
9	125800840	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.111111
9	125800853	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.0666667
9	125800865	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.0689655
9	125800883	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.230769
9	125800892	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.12
9	125800933	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.0967742
9	125800950	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	125817986	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.181818
9	125818084	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	125819406	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.3
9	125833859	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.5
9	125838184	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.4
9	125838235	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.272727
9	125838241	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.166667
9	125839434	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.384615
9	125839453	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.214286
9	125858199	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.3
9	125858831	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.615385
9	125858894	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.363636
9	125860766	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.166667
9	125862516	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.1875
9	125862570	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.153846
9	125863457	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	125867386	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	125867975	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.1875
9	125867988	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.2
9	125868095	A->G	+	ENSG00000167081	PBX3	protein_coding	Intergenic	.	.	Alu	0.363636
9	126809992	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.166667
9	127791047	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
9	127791374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.209302
9	127791388	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
9	127791399	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
9	127791400	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127791587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
9	127791864	A->G	+	.	.	.	Intergenic	.	.	Alu	0.037037
9	128989215	A->G	+	ENSG00000095319	NUP188	protein_coding	Intergenic	.	.	Alu	0.3
9	129845660	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.454545
9	129917471	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129917473	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129952283	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129952308	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129952314	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.818182
9	129952316	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129952375	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129952376	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	129954885	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.105263
9	129954894	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129954981	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	130699793	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.357143
9	130699820	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.363636
9	130700100	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.454545
9	130700106	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.272727
9	130700148	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.272727
9	130705019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	130705196	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
9	130705222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
9	130705232	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	130705305	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
9	130705811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
9	130706059	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	130706156	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
9	130706157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	130706472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
9	130706521	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
9	130706578	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
9	130706915	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
9	130709104	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	131398745	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131401062	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0740741
9	131401551	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.142857
9	131401625	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131404049	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.1875
9	131411006	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131441008	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.133333
9	131441017	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.153846
9	136457097	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.142857
9	136479449	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.25
9	136479450	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.1875
9	136479477	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.157895
9	136479501	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.133333
9	136479907	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.133333
10	100166295	A->G	-	ENSG00000107566	ERLIN1	protein_coding	Intergenic	.	.	Alu	0.166667
10	100166298	A->G	-	ENSG00000107566	ERLIN1	protein_coding	Intergenic	.	.	Alu	0.142857
10	100166325	A->G	-	ENSG00000107566	ERLIN1	protein_coding	Intergenic	.	.	Alu	0.133333
10	101810885	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.3
10	101810886	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4
10	101810918	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.269231
10	101810923	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.37037
10	101810928	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0833333
10	101810937	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.08
10	101810963	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.08
10	101811172	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.363636
10	101811240	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.153846
10	101811264	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.461538
10	101811578	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.105263
10	101811616	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.111111
10	101811670	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.666667
10	101811678	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0909091
10	103163913	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103167674	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.266667
10	103167858	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103169495	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103169536	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103172086	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103172088	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.461538
10	103172098	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.272727
10	103172678	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103172735	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1875
10	103172742	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.15
10	103172828	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103176652	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103177590	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.111111
10	103177673	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103177686	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.272727
10	103178050	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.227273
10	103178336	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.105263
10	103178417	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.125
10	103178708	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.6
10	103178718	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.136364
10	103178730	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.210526
10	103178821	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.454545
10	103179214	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0740741
10	104325681	A->G	-	ENSG00000228261	AL162742.1	lincRNA	Intergenic	.	.	Alu	0.357143
10	110924919	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0714286
10	110925494	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0740741
10	110925557	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.37037
10	110925558	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.428571
10	110925587	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.111111
10	110925588	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0833333
10	110925598	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	110925622	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	110925623	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0625
10	110925647	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0833333
10	110925666	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0425532
10	110925693	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.18
10	114825119	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.105263
10	114830524	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.111111
10	114837381	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.2
10	114839159	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.3
10	114839228	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.3
10	114839237	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.2
10	117332604	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.176471
10	117332635	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.142857
10	117332655	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.105263
10	117332671	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.166667
10	117332701	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.176471
10	117350817	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.454545
10	117350828	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.384615
10	117367844	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.125
10	117371938	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.125
10	117373704	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.125
10	119045017	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119052513	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.285714
10	119052535	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.263158
10	119052570	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.266667
10	119054645	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.133333
10	119054680	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.363636
10	119054700	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119054992	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.25
10	119054993	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119064003	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.217391
10	119064010	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.125
10	119071925	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0952381
10	119071949	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.166667
10	119071978	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0740741
10	119072521	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.55
10	119072525	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.341463
10	119072529	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.1
10	119072545	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.103448
10	119072590	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0540541
10	119072599	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.135135
10	119072617	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0666667
10	119072658	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.230769
10	119074299	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.272727
10	119074353	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.111111
10	119076225	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.3
10	119076246	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.117647
10	119076286	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119077343	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.272727
10	119077375	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119077693	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.111111
10	119105763	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.2
10	119105807	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.266667
10	119106007	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.133333
10	119106011	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.153846
10	119106074	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119106100	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.153846
10	119106400	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.2
10	119106470	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.272727
10	119107503	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119107504	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.133333
10	119107521	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.4
10	119107533	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.153846
10	123002736	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.25
10	124777592	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.2
10	124779193	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.285714
10	124779941	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.214286
10	124781334	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.5
10	124781336	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.2
10	124783395	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.142857
10	124783743	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.111111
10	124786723	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.181818
10	124786727	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.363636
10	124787620	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.181818
10	124787689	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.153846
10	124922460	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.272727
10	124922632	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.181818
10	124923212	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.388889
10	124923265	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.117647
10	124930883	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.181818
10	124938806	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.142857
10	124955074	A->G	+	ENSG00000019995	ZRANB1	protein_coding	Intergenic	.	.	Alu	0.3
10	128051992	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.111111
10	128053108	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.08
10	128053166	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.176471
10	128053183	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0952381
10	128053226	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0689655
10	128053854	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.2
10	128053861	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.117647
10	128053886	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.117647
10	128054657	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.352941
10	131902768	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.117647
10	131902772	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.105263
10	132433579	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
10	133296629	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.272727
10	133296657	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.3125
10	133296658	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.3125
10	133296660	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.2
10	133296700	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.142857
10	133296767	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.454545
10	133296771	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.3
10	133404177	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.117647
10	133404178	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.117647
10	133406347	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.0952381
10	133406431	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.166667
10	133406804	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.166667
10	133406848	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.111111
10	133406862	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.136364
10	133406874	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.115385
10	133410077	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.0909091
10	133410101	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.227273
10	133410113	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.148148
10	133410115	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.555556
10	133410657	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.117647
10	133410665	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.111111
10	133410692	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.307692
10	133410697	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.592593
10	133410700	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.12
10	133410721	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.275862
10	133410724	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.344828
10	133410775	A->G	+	ENSG00000254536	AL360181.3	protein_coding	Intergenic	.	.	Alu	0.12
11	108016463	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.272727
11	108016468	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.230769
11	108016699	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.3
11	108074288	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.3
11	110435271	A->G	+	ENSG00000137714	FDX1	protein_coding	Intergenic	.	.	Alu	0.142857
11	110435272	A->G	+	ENSG00000137714	FDX1	protein_coding	Intergenic	.	.	Alu	0.181818
11	110435606	A->G	+	ENSG00000137714	FDX1	protein_coding	Intergenic	.	.	Alu	0.153846
11	110435638	A->G	+	ENSG00000137714	FDX1	protein_coding	Intergenic	.	.	Alu	0.133333
11	110435662	A->G	+	ENSG00000137714	FDX1	protein_coding	Intergenic	.	.	Alu	0.125
11	117019836	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	117019864	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117024801	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117024819	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117029046	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.454545
11	117029047	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.363636
11	117029122	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117029125	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117029127	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117029135	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.285714
11	117032596	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117038787	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.428571
11	117051631	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.235294
11	117051673	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	117051702	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.157895
11	117051711	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.176471
11	117052060	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	117052097	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.208333
11	117053157	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.307692
11	117053251	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117054736	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	117064959	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117065000	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117065001	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117072264	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117074751	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117074760	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117074805	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117074815	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117074840	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117074858	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	117074864	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117076908	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	117076984	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117077040	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	117077056	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	117077073	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0666667
11	117077088	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0645161
11	117077152	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.130435
11	117084403	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.176471
11	117084404	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117084430	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117085291	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0689655
11	117085764	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.210526
11	117085768	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.45
11	117085802	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.294118
11	117085863	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	117085873	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	117086879	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117088161	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	117088737	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0731707
11	117088792	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.08
11	117088801	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.173913
11	117089216	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	117089238	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117089307	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1
11	117146199	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.142857
11	117146539	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.181818
11	117146768	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.157895
11	117146781	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	117147107	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.142857
11	117147111	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.153846
11	117147113	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.153846
11	117148685	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.2
11	117148997	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.166667
11	117149946	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.2
11	117150241	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.166667
11	117153446	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.4
11	117154011	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.142857
11	117155098	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.142857
11	117171475	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.125
11	118754041	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.166667
11	118995987	A->G	-	ENSG00000255121	AP003392.4	lincRNA	Intergenic	.	.	Alu	0.272727
11	118996013	A->G	-	ENSG00000255121	AP003392.4	lincRNA	Intergenic	.	.	Alu	0.2
11	118999523	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	118999558	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.230769
11	118999559	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.230769
11	119016835	A->G	-	ENSG00000118181	RPS25	protein_coding	Intergenic	.	.	Alu	0.1
11	122672381	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122672420	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.176471
11	122672455	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.333333
11	122672465	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	125658130	A->G	+	ENSG00000149554	CHEK1	protein_coding	Intergenic	.	.	Alu	0.105263
11	126295135	A->G	+	ENSG00000150455	TIRAP	protein_coding	Intergenic	.	.	Alu	0.3
11	126295136	A->G	+	ENSG00000150455	TIRAP	protein_coding	Intergenic	.	.	Alu	0.3
11	126296718	A->G	+	ENSG00000150455	TIRAP	protein_coding	Intergenic	.	.	Alu	0.214286
11	126296727	A->G	+	ENSG00000150455	TIRAP	protein_coding	Intergenic	.	.	Alu	0.133333
11	126346524	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.148148
11	126346583	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.363636
11	126346590	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.4
11	126346700	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.545455
11	126346943	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.133333
11	126346969	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.25
11	126346993	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.285714
11	126347323	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.4375
11	126347324	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.6875
11	126349133	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.473684
11	126349141	A->G	+	ENSG00000280832	GSEC	antisense	Intergenic	.	.	Alu	0.470588
11	130074388	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.142857
11	130075183	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.166667
11	130138175	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.466667
11	130310857	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.190476
11	130310875	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.117647
12	100035561	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.2
12	100035640	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0833333
12	100035723	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0645161
12	100035755	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.142857
12	100035771	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.176471
12	100070884	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.3
12	100138592	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.238095
12	101824572	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101880117	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.272727
12	101880122	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.153846
12	101889702	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.142857
12	101889720	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.142857
12	101899474	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.153846
12	101901622	A->G	+	ENSG00000136048	DRAM1	protein_coding	Intergenic	.	.	Alu	0.181818
12	103794431	A->G	-	ENSG00000111696	NT5DC3	protein_coding	Intergenic	.	.	Alu	0.142857
12	103836029	A->G	-	ENSG00000111696	NT5DC3	protein_coding	Intergenic	.	.	Alu	0.214286
12	103836030	A->G	-	ENSG00000111696	NT5DC3	protein_coding	Intergenic	.	.	Alu	0.214286
12	104290537	A->G	+	ENSG00000198431	TXNRD1	protein_coding	Intergenic	.	.	Alu	0.166667
12	104291725	A->G	+	ENSG00000198431	TXNRD1	protein_coding	Intergenic	.	.	Alu	0.230769
12	104291729	A->G	+	ENSG00000198431	TXNRD1	protein_coding	Intergenic	.	.	Alu	0.153846
12	104294745	A->G	+	ENSG00000198431	TXNRD1	protein_coding	Intergenic	.	.	Alu	0.117647
12	104297071	A->G	+	ENSG00000198431	TXNRD1	protein_coding	Intergenic	.	.	Alu	0.166667
12	104297097	A->G	+	ENSG00000198431	TXNRD1	protein_coding	Intergenic	.	.	Alu	0.153846
12	104297617	A->G	+	ENSG00000198431	TXNRD1	protein_coding	Intergenic	.	.	Alu	0.75
12	104297648	A->G	+	ENSG00000198431	TXNRD1	protein_coding	Intergenic	.	.	Alu	0.142857
12	104464132	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0444444
12	104464197	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.047619
12	104465960	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0384615
12	104488834	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.210526
12	104488835	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.210526
12	104492227	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0740741
12	104492272	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0714286
12	104492303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.178571
12	104492779	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.176471
12	104492822	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.117647
12	104492845	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104492846	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104492867	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.25
12	104492880	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1875
12	104492894	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.117647
12	104492913	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.428571
12	104492922	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.15
12	104492926	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104492939	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0909091
12	104492953	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.269231
12	104492954	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104492990	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0689655
12	104493020	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0833333
12	104493923	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.075
12	104493924	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.047619
12	104493936	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.264706
12	104494005	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0454545
12	104494017	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0909091
12	104518036	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104518050	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104615713	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104615717	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104615743	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.3
12	104616605	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104616707	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104616726	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.235294
12	104616744	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104618444	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.181818
12	104642583	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.4
12	104642634	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.307692
12	104642668	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.230769
12	104643303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.25
12	107367607	A->G	+	ENSG00000151136	BTBD11	protein_coding	Intergenic	.	.	Alu	0.125
12	108711275	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.181818
12	110002566	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.3
12	110005175	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.4
12	110292666	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.307692
12	110292680	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.142857
12	110292707	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.272727
12	110292712	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.166667
12	110297229	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.133333
12	110441645	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.272727
12	110442496	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.181818
12	110447530	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.166667
12	110559871	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.357143
12	110578901	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.133333
12	110581025	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.272727
12	111433675	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.3
12	111585964	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.166667
12	112067092	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.3
12	112373439	A->G	-	ENSG00000173064	HECTD4	protein_coding	Intergenic	.	.	Alu	0.153846
12	112373440	A->G	-	ENSG00000173064	HECTD4	protein_coding	Intergenic	.	.	Alu	0.153846
12	112377688	A->G	-	ENSG00000173064	HECTD4	protein_coding	Intergenic	.	.	Alu	0.2
12	112427851	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.153846
12	112427881	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.153846
12	113178093	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.190476
12	113178175	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.1875
12	113178201	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.166667
12	113178215	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.153846
12	113178707	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.222222
12	113178710	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.166667
12	113178742	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.5
12	115978602	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.272727
12	115994388	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116076280	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116076420	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	116076425	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	116076454	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.307692
12	116076496	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116090928	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0869565
12	116119689	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.4
12	116155203	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116155390	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116166129	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116179407	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.153846
12	116179447	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.333333
12	116193216	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.3
12	116194264	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116195603	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116208207	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116218898	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116221211	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116224756	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.214286
12	116226703	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116226747	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116226783	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.3125
12	116233005	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	116234365	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.08
12	116234392	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.333333
12	116234412	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116234429	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.235294
12	116234502	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.125
12	116234881	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116241218	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116277424	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
12	118137518	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.166667
12	118137743	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.133333
12	118317080	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.6
12	118317115	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	118317123	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.3
12	118317151	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.384615
12	118317154	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.25
12	118317155	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.363636
12	118317176	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.363636
12	118335767	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.08
12	118335776	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0833333
12	118341164	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.15
12	118341209	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.105263
12	118352766	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	118352848	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	118352909	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118354507	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.115385
12	118356696	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.0740741
12	118356746	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.133333
12	118364805	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.1
12	118365481	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.4
12	118366164	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.136364
12	118369106	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.375
12	118369126	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.105263
12	118369971	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118369972	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.214286
12	118370013	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.08
12	120097652	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.363636
12	120114162	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.3
12	120570420	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.181818
12	121210570	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.3
12	121351632	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.3
12	121427398	A->G	-	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.7
12	121428285	A->G	-	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.25
12	122214868	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.4
12	122214869	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.2
12	122488123	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.538462
12	122488128	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.307692
12	122488714	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.214286
12	122488788	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.214286
12	122507788	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.130435
12	122509326	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0689655
12	122509962	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0606061
12	122509986	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0857143
12	122511944	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.153846
12	122511963	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.571429
12	122511984	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.111111
12	122512057	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0465116
12	122512079	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0769231
12	122512502	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.166667
12	122512535	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.125
12	122512574	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.2
12	122513932	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0714286
12	122513949	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0694444
12	122514024	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.114286
12	122514338	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.15
12	122514361	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.238095
12	122514362	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	122514403	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.25
12	122515500	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0882353
12	122515983	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.130435
12	122516912	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0540541
12	122574561	A->G	+	ENSG00000184445	KNTC1	protein_coding	Intergenic	.	.	Alu	0.230769
12	122574564	A->G	+	ENSG00000184445	KNTC1	protein_coding	Intergenic	.	.	Alu	0.230769
12	122574565	A->G	+	ENSG00000184445	KNTC1	protein_coding	Intergenic	.	.	Alu	0.153846
12	122574614	A->G	+	ENSG00000184445	KNTC1	protein_coding	Intergenic	.	.	Alu	0.666667
12	122574620	A->G	+	ENSG00000184445	KNTC1	protein_coding	Intergenic	.	.	Alu	0.75
12	122574624	A->G	+	ENSG00000184445	KNTC1	protein_coding	Intergenic	.	.	Alu	0.166667
12	122575109	A->G	+	ENSG00000184445	KNTC1	protein_coding	Intergenic	.	.	Alu	0.181818
12	122869776	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.153846
12	123356579	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.153846
12	123359467	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.2
12	123360167	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.166667
12	123360648	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.166667
12	123432380	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.375
12	123432396	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.117647
12	123432410	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.142857
12	123432492	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	123434175	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1
12	123434189	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.133333
12	123434318	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.136364
12	123435617	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.193548
12	123435627	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.0740741
12	123435679	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.125
12	123603902	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.166667
12	123603903	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.166667
12	123604074	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.2
12	125051896	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
12	125051903	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
12	125051958	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
12	125051969	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	130803545	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.0909091
12	130803555	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.590909
12	130803567	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.1
12	130803584	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.210526
12	131728756	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.3
12	131728765	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.272727
12	131728801	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.153846
12	131728933	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.133333
12	131728963	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.363636
12	131729288	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.166667
12	131729327	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	131985084	A->G	+	ENSG00000183495	EP400	protein_coding	Intergenic	.	.	Alu	0.2
12	132826198	A->G	+	ENSG00000090615	GOLGA3	protein_coding	Intergenic	.	.	Alu	1
12	133039944	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.142857
13	109388660	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
13	109628866	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
13	109628927	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
13	109676587	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
13	109711478	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
13	109773601	A->G	-	ENSG00000185950	IRS2	protein_coding	Intergenic	.	.	Alu	0.458333
13	110895478	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0666667
13	110895504	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0967742
13	113214588	A->G	+	ENSG00000139842	CUL4A	protein_coding	Intergenic	.	.	Alu	0.461538
13	113298931	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.176471
13	113302682	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.166667
14	100243611	A->G	+	ENSG00000100811	YY1	protein_coding	Intergenic	.	.	Alu	0.125
14	101814594	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.272727
14	101816093	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.25
14	101816120	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.136364
14	101862030	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.3
14	101967658	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.111111
14	101968637	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	101968762	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.142857
14	101968784	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.117647
14	101971257	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.285714
14	101971283	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.142857
14	101971321	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	101996734	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.307692
14	102003401	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102003762	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.272727
14	102018883	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.363636
14	102031374	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.363636
14	102346516	A->G	-	ENSG00000100865	CINP	protein_coding	Intergenic	.	.	Alu	0.166667
14	102595253	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.272727
14	102599897	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.214286
14	102601027	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.4
14	102602451	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102602463	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102602643	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102609539	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.454545
14	102611113	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.117647
14	102617683	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102624645	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.3
14	102625638	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102787952	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.166667
14	102787991	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.153846
14	102788001	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	103643719	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.181818
14	103682634	A->G	+	ENSG00000246451	AL049840.1	antisense	Intergenic	.	.	Alu	0.181818
14	103688275	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.142857
14	105224617	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.545455
14	105864670	A->G	-	.	.	.	Intergenic	.	.	Alu	1
15	101283444	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.153846
15	101721698	A->G	-	ENSG00000185418	TARSL2	protein_coding	Intergenic	.	.	Alu	0.214286
MT	10463	A->G	-	ENSG00000210174	MT-TR	Mt_tRNA	Intron	.	.	Alu	1
MT	1438	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
MT	750	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
X	131756684	A->G	-	ENSG00000213468	FIRRE	lincRNA	Intron	.	.	Alu	0.05
X	153795859	A->G	+	ENSG00000180879	SSR4	protein_coding	Intron	.	.	Alu	0.533333
X	2715212	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	0.411765
X	2715433	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	0.675676
X	2715566	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	1
X	74278715	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.272727
X	74278755	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.125
Y	7328388	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.307692
4	378090	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intron	.	.	Alu	0.3
4	780286	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.125
4	780327	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.133333
4	780328	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.133333
4	780350	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.142857
4	780465	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.166667
7	880934	A->G	+	ENSG00000164828	SUN1	protein_coding	Intron	.	.	Alu	0.272727
19	218884	A->G	-	ENSG00000282508	LINC01002	processed_transcript	Intron	.	.	Alu	0.0526316
19	221166	A->G	-	ENSG00000282508	LINC01002	processed_transcript	Intron	.	.	Alu	0.62069
1	1484346	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.2
1	1672296	A->G	-	ENSG00000269737	AL691432.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.111111
1	1736376	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.130435
1	2371655	A->G	-	ENSG00000116151	MORN1	protein_coding	Intron	.	.	Alu	0.2
1	2371695	A->G	-	ENSG00000116151	MORN1	protein_coding	Intron	.	.	Alu	0.285714
1	2371783	A->G	-	ENSG00000116151	MORN1	protein_coding	Intron	.	.	Alu	0.2
1	2371789	A->G	-	ENSG00000116151	MORN1	protein_coding	Intron	.	.	Alu	0.2
1	2371845	A->G	-	ENSG00000116151	MORN1	protein_coding	Intron	.	.	Alu	0.3
1	2371846	A->G	-	ENSG00000116151	MORN1	protein_coding	Intron	.	.	Alu	0.3
2	9852078	A->G	+	ENSG00000115750	TAF1B	protein_coding	Intron	.	.	Alu	0.285714
2	9936697	A->G	+	ENSG00000269973	AC010969.2	lincRNA	Intron	.	.	Alu	0.0952381
6	2269756	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intron	.	.	Alu	0.1875
6	2269782	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intron	.	.	Alu	0.318182
6	2269786	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intron	.	.	Alu	0.08
6	2269790	A->G	+	ENSG00000250903	GMDS-DT	lincRNA	Intron	.	.	Alu	0.32
7	2238880	A->G	-	ENSG00000122687	MRM2	protein_coding	Intron	.	.	Alu	0.142857
12	6944199	A->G	+	ENSG00000111678	C12orf57	protein_coding	Intron	.	.	Alu	1
12	6953228	A->G	+	ENSG00000111679	PTPN6	protein_coding	Intron	.	.	Alu	1
12	7923267	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.3
12	7932951	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	1
12	9648777	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intron	.	.	Alu	0.428571
12	9658610	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.285714
12	9658626	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.117647
12	9659666	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.0540541
12	9659679	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.25
17	9554258	A->G	-	ENSG00000271851	AC087501.4	sense_intronic	Intron	.	.	Alu	0.166667
18	9115671	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.181818
18	9115673	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.181818
1	20649582	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.857143
1	20649585	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.692308
1	20649681	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.363636
1	20649682	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.181818
1	23975231	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intron	.	.	Alu	1
1	31933671	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.117647
1	31933697	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.133333
1	36459299	A->G	-	ENSG00000116898	MRPS15	protein_coding	Intron	.	.	Alu	0.272727
1	44776867	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.111111
1	45609940	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.285714
1	45610795	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.1875
1	45610796	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.125
1	45610809	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.111111
1	45655861	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.181818
1	45655924	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.166667
1	46593744	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.461538
1	46593793	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.272727
1	46593809	A->G	-	ENSG00000079277	MKNK1	protein_coding	Intron	.	.	Alu	0.3
1	77677216	A->G	-	ENSG00000036549	AC118549.1	protein_coding	Intron	.	.	Alu	0.133333
1	93309721	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.545455
2	23968993	A->G	+	ENSG00000173960	UBXN2A	protein_coding	Intron	.	.	Alu	0.142857
2	23969010	A->G	+	ENSG00000173960	UBXN2A	protein_coding	Intron	.	.	Alu	0.2
2	33481369	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intron	.	.	Alu	0.307692
2	33482221	A->G	+	ENSG00000152689	RASGRP3	protein_coding	Intron	.	.	Alu	0.142857
2	61088614	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.285714
2	61088621	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.333333
2	61088638	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.3
2	61088660	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.8
2	61088704	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.363636
2	61088706	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.2
2	61088730	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.214286
2	61088784	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.2
2	61089590	A->G	+	ENSG00000162929	KIAA1841	protein_coding	Intron	.	.	Alu	0.2
2	61141886	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.0833333
2	61141936	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.181818
2	61142619	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.105263
2	61142746	A->G	-	ENSG00000212978	AC016747.1	processed_transcript	Intron	.	.	Alu	0.117647
2	86562241	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.285714
3	25734154	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intron	.	.	Alu	0.545455
3	37173003	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intron	.	.	Alu	0.0377358
3	50112949	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.384615
3	50113054	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.25
4	24530343	A->G	-	ENSG00000109606	DHX15	protein_coding	Intron	.	.	Alu	0.0869565
4	40209520	A->G	+	ENSG00000168421	RHOH	protein_coding	Intron	.	.	Alu	0.09375
4	40209545	A->G	+	ENSG00000168421	RHOH	protein_coding	Intron	.	.	Alu	0.0465116
4	40209558	A->G	+	ENSG00000168421	RHOH	protein_coding	Intron	.	.	Alu	0.0857143
4	40209629	A->G	+	ENSG00000168421	RHOH	protein_coding	Intron	.	.	Alu	0.0666667
4	40209643	A->G	+	ENSG00000168421	RHOH	protein_coding	Intron	.	.	Alu	0.0769231
4	48856617	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intron	.	.	Alu	0.25
4	48856622	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intron	.	.	Alu	0.2
4	48856645	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intron	.	.	Alu	0.3
4	55416129	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.0714286
4	98026084	A->G	+	ENSG00000242697	RPL5P12	processed_pseudogene	Intron	.	.	Alu	1
5	37051065	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intron	.	.	Alu	0.3
5	44816468	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.0819672
5	44816469	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.295082
5	44816481	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.25
5	70479075	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.214286
5	70479080	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
5	94704845	A->G	-	ENSG00000133302	SLF1	protein_coding	Intron	.	.	Alu	0.157895
5	94704850	A->G	-	ENSG00000133302	SLF1	protein_coding	Intron	.	.	Alu	0.210526
6	29943115	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intron	.	.	Alu	0.617284
6	30261457	A->G	+	ENSG00000270604	HCG17	lincRNA	Intron	.	.	Alu	0.976744
6	42881634	A->G	+	ENSG00000146223	RPL7L1	protein_coding	Intron	.	.	Alu	0.181818
6	42881671	A->G	+	ENSG00000146223	RPL7L1	protein_coding	Intron	.	.	Alu	0.153846
6	42881688	A->G	+	ENSG00000146223	RPL7L1	protein_coding	Intron	.	.	Alu	0.333333
6	42940416	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.08
6	42940436	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0625
6	57959039	A->G	-	ENSG00000215190	LINC00680	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.210526
6	57959063	A->G	-	ENSG00000215190	LINC00680	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.333333
7	38376880	A->G	+	ENSG00000281103	TRG-AS1	antisense	Intron	.	.	Alu	0.0769231
7	38378162	A->G	+	ENSG00000281103	TRG-AS1	antisense	Intron	.	.	Alu	0.08
7	65004268	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intron	.	.	Alu	0.142857
7	66493259	A->G	-	ENSG00000179406	LINC00174	processed_transcript	Intron	.	.	Alu	0.111111
7	72829753	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	1
7	72999529	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.636364
7	76549628	A->G	+	ENSG00000205485	AC004980.1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.148148
7	77002232	A->G	+	ENSG00000265479	DTX2P1-UPK3BP1-PMS2P11	processed_transcript	Intron	.	.	Alu	0.5
7	84939766	A->G	-	ENSG00000280325	AC074183.2	TEC	Intron	.	.	Alu	1
7	87186335	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.2
7	87186340	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.2
7	87186341	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.2
7	87186355	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.25
7	87187314	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.2
7	87187347	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.4
7	87187352	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.7
8	55893906	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.181818
9	15505116	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.0833333
9	34201398	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.136364
9	34201459	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.0714286
9	34201464	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.105263
9	34201465	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.0952381
9	34201476	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.230769
9	40992722	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.4
9	41008967	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.472222
9	41011651	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.275862
9	88416682	A->G	+	ENSG00000106723	SPIN1	protein_coding	Intron	.	.	Alu	0.166667
10	28523048	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0909091
10	42518049	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.454545
10	42518072	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.4
10	42518688	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.133333
10	42614292	A->G	-	ENSG00000196693	ZNF33B	protein_coding	Intron	.	.	Alu	0.157895
10	50626712	A->G	+	ENSG00000226200	SGMS1-AS1	antisense	Intron	.	.	Alu	0.181818
10	71365235	A->G	+	ENSG00000279406	AL359183.1	TEC	Intron	.	.	Alu	0.181818
10	73778943	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.107143
10	73779363	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.0869565
10	75217959	A->G	+	ENSG00000165637	VDAC2	protein_coding	Intron	.	.	Alu	0.0487805
11	16756339	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.689655
11	16756344	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.233333
11	16756363	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intron	.	.	Alu	0.3125
11	17332846	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intron	.	.	Alu	0.0230769
11	65442590	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0588235
11	65442619	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.255319
11	65442627	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.12069
11	65442701	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.122449
11	65442703	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.04
11	66269978	A->G	+	ENSG00000174903	RAB1B	protein_coding	Intron	.	.	Alu	0.2
11	93733708	A->G	-	ENSG00000284458	MIR1304	miRNA	Intron	.	.	Alu	0.647059
11	93793188	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.272727
11	93793193	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.166667
11	93793196	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.25
11	93793199	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.25
11	93793255	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.363636
11	93793281	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.133333
11	93800820	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.6
11	93806104	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.230769
11	93806159	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.153846
11	93806171	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.181818
12	47210682	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intron	.	.	Alu	0.3
12	69255041	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intron	.	.	Alu	0.53125
13	32524825	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.181818
13	32525013	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.4
13	32525553	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.176471
13	50952062	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	Intron	.	.	Alu	0.3
14	20451389	A->G	-	ENSG00000258515	AL355075.2	antisense	Intron	.	.	Alu	0.25
14	55285360	A->G	+	ENSG00000278818	RF00017	misc_RNA	Intron	.	.	Alu	0.117647
14	58293880	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0444444
14	58293922	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0377358
14	58294014	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0909091
14	58295221	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0606061
14	58295237	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0377358
14	58295265	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0298507
14	58295741	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.09375
15	22672802	A->G	+	ENSG00000276141	WHAMMP3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	1
15	24982618	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.833333
15	24982621	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.375
15	24982669	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.272727
15	24982690	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.1
15	24982691	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.3
15	24982702	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.125
15	24982719	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.307692
15	24982729	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.928571
15	24983035	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.214286
15	24983245	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.4
15	24983271	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.125
15	24983272	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.6875
15	24983278	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.133333
15	24983703	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.357143
15	24983708	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.416667
15	24983709	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.307692
15	24985469	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.192308
15	24985575	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.0909091
15	41296936	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.2
15	41297189	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.272727
15	41298895	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0204082
15	41302355	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.02
15	41305381	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.03125
15	41308840	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.166667
15	41308859	A->G	-	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.272727
15	50351359	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.0869565
15	50363484	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	51568039	A->G	-	ENSG00000104093	DMXL2	protein_coding	Intron	.	.	Alu	0.181818
15	78890672	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.5
15	78890716	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.0625
15	78890762	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.0540541
15	90075489	A->G	-	ENSG00000259291	ZNF710-AS1	antisense	Intron	.	.	Alu	0.0769231
15	92808965	A->G	-	ENSG00000274215	AC106028.4	lincRNA	Intron	.	.	Alu	0.2
16	21506066	A->G	-	ENSG00000265462	MIR3680-1	miRNA	Intron	.	.	Alu	0.363636
16	21520173	A->G	-	ENSG00000258186	SLC7A5P2	transcribed_processed_pseudogene	Intron	.	.	Alu	0.704918
16	30536880	A->G	+	ENSG00000235560	AC002310.1	antisense	Intron	.	.	Alu	0.153846
16	30919956	A->G	-	ENSG00000260852	FBXL19-AS1	antisense	Intron	.	.	Alu	0.153846
16	31182817	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.08
16	31457695	A->G	-	ENSG00000260267	AC026471.1	antisense	Intron	.	.	Alu	0.0769231
16	81030942	A->G	+	ENSG00000261061	AC092718.4	sense_intronic	Intron	.	.	Alu	0.166667
16	88717971	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.4
16	88718007	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.125
16	88718781	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.230769
16	88718996	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.2
17	16440617	A->G	+	ENSG00000266651	AC093484.4	lincRNA	Intron	.	.	Alu	0.0714286
17	29403774	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intron	.	.	Alu	0.133333
17	30636278	A->G	+	ENSG00000250462	LRRC37BP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.333333
17	30758213	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.307692
17	30758237	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
17	43224882	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intron	.	.	Alu	0.3
17	43226266	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intron	.	.	Alu	0.5
17	44176236	A->G	-	ENSG00000267080	ASB16-AS1	antisense	Intron	.	.	Alu	0.136364
17	45533492	A->G	-	ENSG00000266918	AC091132.4	TEC	Intron	.	.	Alu	0.714286
17	46156842	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.272727
17	46156847	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.333333
17	50723710	A->G	+	ENSG00000278963	AC005921.3	TEC	Intron	.	.	Alu	0.166667
17	58476736	A->G	-	ENSG00000266648	SETP3	processed_pseudogene	Intron	.	.	Alu	1
17	62004962	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.181818
17	62004983	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.166667
17	62005059	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.615385
17	62005484	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.166667
17	62005496	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.117647
17	62005505	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.2
17	62005506	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.214286
17	62005537	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.363636
17	62005543	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.153846
17	62007141	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.230769
17	62007194	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.1875
17	64783161	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.666667
17	67719483	A->G	+	ENSG00000130935	NOL11	protein_coding	Intron	.	.	Alu	0.266667
17	67719522	A->G	+	ENSG00000130935	NOL11	protein_coding	Intron	.	.	Alu	0.285714
17	67719533	A->G	+	ENSG00000130935	NOL11	protein_coding	Intron	.	.	Alu	0.153846
17	68115079	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.157895
17	68115091	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.363636
17	68115135	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.15
17	68115136	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
17	68115148	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.111111
17	74204882	A->G	+	ENSG00000172809	RPL38	protein_coding	Intron	.	.	Alu	0.142857
17	74204885	A->G	+	ENSG00000172809	RPL38	protein_coding	Intron	.	.	Alu	0.133333
17	75147939	A->G	-	ENSG00000189159	JPT1	protein_coding	Intron	.	.	Alu	0.166667
17	81247552	A->G	+	ENSG00000157637	SLC38A10	protein_coding	Intron	.	.	Alu	0.2
17	81247582	A->G	-	ENSG00000157637	SLC38A10	protein_coding	Intron	.	.	Alu	0.266667
17	81879787	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0441176
17	81879802	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0333333
17	81880199	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0789474
17	81880205	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.2
17	81880299	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.117647
17	81880335	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0952381
17	81880374	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.125
17	81880405	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.190476
17	81880901	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.075
17	81880905	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.1
17	81880912	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.0930233
17	82265406	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.153846
18	49390780	A->G	-	ENSG00000141627	DYM	protein_coding	Intron	.	.	Alu	0.266667
19	10932233	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intron	.	.	Alu	0.25
19	10932241	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intron	.	.	Alu	0.285714
19	12943291	A->G	+	ENSG00000179218	CALR	protein_coding	Intron	.	.	Alu	0.04
19	12943307	A->G	+	ENSG00000179218	CALR	protein_coding	Intron	.	.	Alu	0.0491803
19	16079985	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0769231
19	16634542	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.153846
19	16634547	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.25
19	16634574	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.642857
19	16634605	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.25
19	16634614	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.25
19	16634696	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.230769
19	16636388	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.142857
19	16636466	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.157895
19	16636481	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.210526
19	16636485	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.5
19	16636507	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.1875
19	18946131	A->G	+	ENSG00000269019	HOMER3-AS1	antisense	Intron	.	.	Alu	0.1
19	18946158	A->G	+	ENSG00000269019	HOMER3-AS1	antisense	Intron	.	.	Alu	0.1
19	19789796	A->G	-	ENSG00000267481	AC011477.2	sense_intronic	Intron	.	.	Alu	0.181818
19	23257598	A->G	-	ENSG00000269837	IPO5P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.166667
19	23257614	A->G	-	ENSG00000269837	IPO5P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.181818
19	36320668	A->G	-	ENSG00000232677	LINC00665	lincRNA	Intron	.	.	Alu	0.2
19	36320687	A->G	-	ENSG00000232677	LINC00665	lincRNA	Intron	.	.	Alu	0.5
19	37324960	A->G	+	ENSG00000181666	HKR1	protein_coding	Intron	.	.	Alu	0.15
19	37324963	A->G	+	ENSG00000181666	HKR1	protein_coding	Intron	.	.	Alu	0.3125
19	37324966	A->G	+	ENSG00000181666	HKR1	protein_coding	Intron	.	.	Alu	0.181818
19	37324977	A->G	+	ENSG00000181666	HKR1	protein_coding	Intron	.	.	Alu	0.2
19	37325030	A->G	+	ENSG00000181666	HKR1	protein_coding	Intron	.	.	Alu	0.5
19	37325039	A->G	+	ENSG00000181666	HKR1	protein_coding	Intron	.	.	Alu	0.166667
19	37325040	A->G	+	ENSG00000181666	HKR1	protein_coding	Intron	.	.	Alu	0.333333
19	39490924	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.2
19	39491791	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.2
19	52651844	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.142857
19	52651848	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.230769
19	52652176	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.0769231
19	52652194	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.210526
19	52652195	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.105263
19	52652196	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.111111
19	52652281	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.272727
19	52652311	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.75
19	52652312	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.384615
19	52652314	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.230769
19	52652324	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.214286
19	52652336	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.125
19	52652359	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.125
19	52652372	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.105263
19	52652378	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.3
19	52652421	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.578947
19	52927669	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.25
19	53213751	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
19	53213758	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
19	53213815	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.181818
19	53213830	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.153846
19	53213893	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.4
19	53213894	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.470588
19	53213955	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
19	53213969	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.133333
19	53214001	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.125
19	53214163	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.235294
19	53214200	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.105263
19	53214265	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.368421
19	53214282	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
19	53214287	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.769231
19	53214335	A->G	+	ENSG00000269001	AC092070.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.16129
19	57304919	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.589744
19	57304925	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.0526316
19	57304929	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.176471
19	57304946	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.047619
19	57304960	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.0571429
19	57305022	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.125
19	57305556	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.6
19	57305599	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.1
19	57305619	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.0571429
19	57305637	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.766667
19	57305645	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.258065
19	57305648	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.75
19	57305658	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.0625
19	57307412	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.2
19	57853856	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intron	.	.	Alu	0.133333
19	57853970	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intron	.	.	Alu	0.2
20	36934730	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.333333
20	36934751	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.166667
20	36934797	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.266667
20	36934803	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.666667
20	36934819	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intron	.	.	Alu	0.235294
21	34833237	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intron	.	.	Alu	0.0909091
21	34833243	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intron	.	.	Alu	0.1
1	121571348	A->G	+	ENSG00000231752	EMBP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	1
1	167640617	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0714286
1	167641563	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.125
1	167641568	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0952381
1	167641571	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.142857
1	201962486	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intron	.	.	Alu	0.2
1	207768998	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.5
1	207769007	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.181818
1	207769056	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.2
1	214530415	A->G	-	ENSG00000152104	PTPN14	protein_coding	Intron	.	.	Alu	0.181818
1	214530543	A->G	-	ENSG00000152104	PTPN14	protein_coding	Intron	.	.	Alu	0.166667
1	223994282	A->G	+	ENSG00000278467	AC138393.3	lincRNA	Intron	.	.	Alu	0.117647
1	223994287	A->G	+	ENSG00000278467	AC138393.3	lincRNA	Intron	.	.	Alu	0.117647
1	244857354	A->G	-	ENSG00000153187	HNRNPU	protein_coding	Intron	.	.	Alu	0.028169
2	131469918	A->G	-	ENSG00000173272	MZT2A	protein_coding	Intron	.	.	Alu	0.166667
2	135345408	A->G	-	ENSG00000121988	ZRANB3	protein_coding	Intron	.	.	Alu	0.142857
2	135345424	A->G	-	ENSG00000121988	ZRANB3	protein_coding	Intron	.	.	Alu	0.142857
2	148054025	A->G	+	ENSG00000204406	MBD5	protein_coding	Intron	.	.	Alu	0.0952381
2	178433678	A->G	+	ENSG00000223960	AC009948.1	antisense	Intron	.	.	Alu	0.0666667
2	178438868	A->G	+	ENSG00000223960	AC009948.1	antisense	Intron	.	.	Alu	0.181818
2	196153071	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.166667
2	196154106	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.133333
2	196154122	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.153846
2	218234046	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.25
2	218235276	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.117647
2	218235293	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.214286
2	218235316	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.133333
2	218235426	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.3
2	218256578	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.25
2	218256579	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.25
3	150585398	A->G	+	ENSG00000120742	SERP1	protein_coding	Intron	.	.	Alu	0.15
3	160412593	A->G	+	ENSG00000248710	AC079594.2	protein_coding	Intron	.	.	Alu	0.0731707
3	172337749	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intron	.	.	Alu	0.25
3	172337770	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intron	.	.	Alu	0.15
3	172337771	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intron	.	.	Alu	0.105263
3	172338070	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intron	.	.	Alu	0.5
3	196400672	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.111111
4	102811619	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0454545
4	102812171	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.151515
4	151103269	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.5
4	151103371	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0540541
4	151103652	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0307692
4	151103669	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0408163
5	180835080	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.647059
5	180835372	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.171429
5	180835373	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.235294
5	180835380	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.0967742
5	181313887	A->G	+	ENSG00000238035	AC138035.1	lincRNA	Intron	.	.	Alu	0.8
6	107040683	A->G	+	ENSG00000130349	C6orf203	protein_coding	Intron	.	.	Alu	0.181818
6	111278449	A->G	+	ENSG00000230177	AL080317.1	antisense	Intron	.	.	Alu	0.454545
7	100320274	A->G	-	ENSG00000214300	SPDYE3	protein_coding	Intron	.	.	Alu	0.153846
7	100356060	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.181818
7	100356089	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.166667
7	105104099	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.181818
7	116888616	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intron	.	.	Alu	0.2
7	128529021	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.157895
7	128529440	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.272727
7	128653235	A->G	+	ENSG00000230715	AC018638.2	processed_pseudogene	Intron	.	.	Alu	0.181818
7	130945478	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.230769
7	130959940	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.03125
7	143298531	A->G	+	ENSG00000240322	RN7SL481P	misc_RNA	Intron	.	.	Alu	0.214286
7	151502051	A->G	-	ENSG00000240132	ETF1P2	processed_pseudogene	Intron	.	.	Alu	0.2
7	157380034	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intron	.	.	Alu	0.0833333
7	157380049	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intron	.	.	Alu	0.0769231
8	129949034	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intron	.	.	Alu	0.266667
8	129949036	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intron	.	.	Alu	0.133333
8	144974352	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.125
8	144974933	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.1875
9	112035925	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.214286
9	112035931	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.266667
9	112036067	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.285714
9	112036076	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.166667
9	112036106	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.166667
9	112036137	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.333333
9	112036145	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.25
9	112036678	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.384615
9	112036697	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.0952381
9	112036700	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.272727
9	112036755	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.192308
9	112036771	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.0869565
9	112036800	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.2
9	112036801	A->G	-	ENSG00000259953	AL138756.1	sense_overlapping	Intron	.	.	Alu	0.105263
9	113151967	A->G	+	ENSG00000136867	SLC31A2	protein_coding	Intron	.	.	Alu	0.4
9	130699747	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intron	.	.	Alu	0.111111
9	130699768	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intron	.	.	Alu	0.111111
10	103169399	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intron	.	.	Alu	0.142857
10	103169429	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intron	.	.	Alu	0.333333
10	119105346	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intron	.	.	Alu	0.117647
10	119105374	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intron	.	.	Alu	0.111111
10	119105381	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intron	.	.	Alu	0.214286
10	119105389	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intron	.	.	Alu	0.142857
11	117159518	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intron	.	.	Alu	0.384615
11	119009913	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.166667
12	100033659	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.0606061
12	100033758	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.214286
12	100033773	A->G	-	ENSG00000280088	AC126474.2	TEC	Intron	.	.	Alu	0.230769
12	110325854	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intron	.	.	Alu	0.153846
12	118032521	A->G	+	ENSG00000111445	RFC5	protein_coding	Intron	.	.	Alu	0.176471
12	121213622	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.3
12	121213770	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.2
12	122221541	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.181818
12	122507181	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.433333
12	122507231	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.0882353
12	122508031	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.0967742
12	122508053	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.08
12	122886568	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.133333
12	122886589	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.142857
12	123459039	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.25
12	132758389	A->G	-	ENSG00000176915	ANKLE2	protein_coding	Intron	.	.	Alu	0.230769
13	102607640	A->G	+	ENSG00000134900	TPP2	protein_coding	Intron	.	.	Alu	0.117647
13	102607648	A->G	+	ENSG00000134900	TPP2	protein_coding	Intron	.	.	Alu	0.111111
13	102607732	A->G	+	ENSG00000134900	TPP2	protein_coding	Intron	.	.	Alu	0.111111
14	102347332	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.571429
14	102347388	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.142857
14	102347418	A->G	-	ENSG00000100865	CINP	protein_coding	Intron	.	.	Alu	0.153846
14	105668389	A->G	-	ENSG00000253755	IGHGP	IG_C_pseudogene	Intron	.	.	Alu	1
14	105668401	A->G	-	ENSG00000253755	IGHGP	IG_C_pseudogene	Intron	.	.	Alu	0.928571
X	101009607	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.545455
X	101009638	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.733333
X	101009647	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	119539374	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0512821
X	123909093	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	123909128	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	123909129	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.148148
X	123909214	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123909231	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123912440	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	123913419	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	1310013	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	134844159	A->G	+	ENSG00000156500	FAM122C	protein_coding	three_prime_utr	.	.	Alu	0.2
X	150767753	A->G	-	ENSG00000102181	CD99L2	protein_coding	three_prime_utr	.	.	Alu	0.121212
X	15782972	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	15783664	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.2
X	15783680	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	15783688	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	15783712	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	15783716	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.647059
X	15783797	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	15783798	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	15783799	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.571429
X	15783800	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.357143
X	15783801	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	15783968	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.192308
X	15783987	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	15783988	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.535714
X	15786076	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.1875
X	15786126	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.0588235
X	15786127	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.0882353
X	15786128	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.117647
X	16763059	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.15
X	16763063	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	16763106	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.241379
X	16763152	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.653846
X	16763175	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	16763188	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.08
X	16763192	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	16763206	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	16763230	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.533333
X	16763379	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.25
X	16763453	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.388889
X	16763465	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	16763564	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.615385
X	16763575	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.269231
X	16763629	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.129032
X	16763635	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	16763948	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16764542	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16764743	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.375
X	16764795	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	16764824	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.1
X	2220061	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	2487001	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.555556
X	2906240	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0338983
X	2906853	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.02
X	2906966	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.030303
X	2907054	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.0285714
X	2907073	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.180328
X	299582	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	299698	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0363636
X	299734	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.04
X	299766	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	300803	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
X	301220	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
X	301307	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.04
X	301317	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
X	301366	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0508475
X	302007	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	1
X	302463	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	46603757	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	46604505	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	46604516	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	46604625	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.108108
X	46604627	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	46605169	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	46606011	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	46606117	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	48578508	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.6
X	77827620	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0223881
X	78128291	A->G	+	ENSG00000102144	PGK1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	85089210	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	85089355	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0697674
X	85089377	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0392157
X	85090866	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.1
X	85090905	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	85090909	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	85091006	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.08
X	85091025	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	85091337	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.315789
X	85091339	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.388889
X	85091340	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	85091342	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	85091351	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	85091806	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.6
X	85091998	A->G	+	ENSG00000155008	APOOL	protein_coding	three_prime_utr	.	.	Alu	0.0384615
11	768345	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	768393	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	1635543	A->G	-	ENSG00000248333	CDK11B	protein_coding	three_prime_utr	.	.	Alu	1
1	1663038	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.681818
1	1663539	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.03125
1	1663595	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0441176
1	1664061	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.027027
1	1664145	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.08
1	1729416	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.181818
1	1729478	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.583333
1	1729597	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.230769
1	1729608	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.545455
1	1729613	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	1729614	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	1731108	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.25
1	1731121	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.142857
1	1731165	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.588235
1	1731171	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.444444
1	1731184	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.133333
1	1731188	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	1
1	1731290	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.363636
1	1731294	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.545455
1	1731295	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.272727
1	1731315	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.142857
1	1731325	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.571429
1	1731742	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.0571429
1	1731783	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	1732190	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.105263
1	3812753	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.125
1	3813293	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	3813347	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	3813356	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	3813358	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	3813362	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	3813763	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.818182
1	3813767	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.642857
1	3813768	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	3813787	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	6222527	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.0576923
1	6522116	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0882353
1	6522338	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	6522438	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.05
1	6522463	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	6522467	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0576923
1	6522976	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	6523006	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.125
1	6523533	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	9036288	A->G	-	ENSG00000142583	SLC2A5	protein_coding	three_prime_utr	.	.	Alu	0.12
1	9036401	A->G	-	ENSG00000142583	SLC2A5	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	9036433	A->G	-	ENSG00000142583	SLC2A5	protein_coding	three_prime_utr	.	.	Alu	0.25
1	9102303	A->G	-	ENSG00000180758	GPR157	protein_coding	three_prime_utr	.	.	Alu	0.3
1	9102984	A->G	-	ENSG00000180758	GPR157	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	9265684	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	9265728	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0428571
1	9265746	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.05
1	9265756	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0243902
1	9266900	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0285714
1	9267020	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	9267968	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	9271059	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0215054
1	9583047	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9583096	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9583097	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9583137	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	9583826	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9584740	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	9584789	A->G	+	ENSG00000171612	SLC25A33	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	9982852	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9982853	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	9982861	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9982879	A->G	+	ENSG00000173614	NMNAT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	1386797	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	1386818	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	1386857	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	1386859	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.107143
4	1389430	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	1389449	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.545455
4	1389451	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.25
4	1390330	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	2230219	A->G	-	ENSG00000214367	HAUS3	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2839793	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	3022234	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	7283182	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.0555556
6	7283345	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.190476
6	7283384	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.103448
6	7283677	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.0740741
6	7285557	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.0217391
6	7286811	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.0810811
6	7286826	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.0512821
6	7286829	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.09375
6	7286830	A->G	-	ENSG00000238221	AL139095.4	antisense	three_prime_utr	.	.	Alu	0.1
6	8014412	A->G	-	ENSG00000188428	BLOC1S5	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	2234582	A->G	-	ENSG00000122687	MRM2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	2442637	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	1782334	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	1782342	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.230769
8	6643358	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.45
8	6643394	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	9750162	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	9750194	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.04
12	6819852	A->G	+	ENSG00000010610	CD4	protein_coding	three_prime_utr	.	.	Alu	0.480519
12	7095183	A->G	-	ENSG00000139178	C1RL	protein_coding	three_prime_utr	.	.	Alu	0.031746
12	7919412	A->G	-	ENSG00000059804	SLC2A3	protein_coding	three_prime_utr	.	.	Alu	1
12	8053571	A->G	+	ENSG00000065970	FOXJ2	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	9696287	A->G	+	ENSG00000069493	CLEC2D	protein_coding	three_prime_utr	.	.	Alu	0.388889
12	9752880	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	1
12	9753471	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	0.535714
16	9104243	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	9106317	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.133333
16	9106409	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.034188
16	9106445	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0229008
16	9110805	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.125
16	9110990	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.025974
16	9111028	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0344828
17	1781148	A->G	-	ENSG00000186532	SMYD4	protein_coding	three_prime_utr	.	.	Alu	0.3
17	2322780	A->G	-	ENSG00000167720	SRR	protein_coding	three_prime_utr	.	.	Alu	0.1
17	2418533	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	8368856	A->G	-	ENSG00000265749	AC135178.3	antisense	three_prime_utr	.	.	Alu	0.3
19	1799397	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	1799402	A->G	-	ENSG00000130270	ATP8B3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	1925307	A->G	+	ENSG00000227500	SCAMP4	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	3542777	A->G	-	ENSG00000183397	C19orf71	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	7084369	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	7084382	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	7084420	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7084454	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	7084492	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7084567	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.125
19	7084588	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	7084627	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	7085302	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7085386	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.08
19	7085972	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.6
19	7085975	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7086029	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	7086111	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7086949	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.25
19	7086958	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	7086989	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.125
19	8509863	A->G	-	ENSG00000133250	ZNF414	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	8509881	A->G	-	ENSG00000133250	ZNF414	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	9524523	A->G	-	ENSG00000130818	ZNF426	protein_coding	three_prime_utr	.	.	Alu	0.1
19	9524537	A->G	-	ENSG00000130818	ZNF426	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	9524538	A->G	-	ENSG00000130818	ZNF426	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	9524546	A->G	-	ENSG00000130818	ZNF426	protein_coding	three_prime_utr	.	.	Alu	0.1
19	9561669	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0307692
19	9561707	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0344828
19	9561789	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0681818
19	9562329	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	9562332	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	9562398	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	9562795	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	9562834	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	9562931	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.2
19	9562996	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	9563697	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0307692
19	9564371	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.103448
19	9565425	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	9647300	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	9647308	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.5
19	9647650	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.25
19	9647661	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	9647685	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	9647729	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	9648399	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	9648405	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	9648417	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.1
19	9650792	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	9650801	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	9650809	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3108245	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.3
20	3108281	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.181818
20	3108287	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.181818
20	3108290	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.6
20	3108730	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.5
20	3108760	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.153846
20	3108838	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.153846
20	3108850	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.166667
20	3867385	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.138889
20	3868762	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3869060	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
20	3869066	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
20	3869071	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0789474
20	3869127	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	3869130	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.777778
20	3869355	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3869434	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3869435	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3869469	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3869552	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0731707
20	3869630	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3869636	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.193548
20	3869704	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.173913
20	3869705	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.458333
20	3869708	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.434783
20	3869709	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.217391
20	3869961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.106383
20	3871110	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0322581
20	3872238	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
20	3872240	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
20	3872373	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0588235
20	3928599	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0212766
20	3928635	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0340909
20	3929024	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0232558
20	3929028	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
20	3929041	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0258621
20	3929079	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0247934
20	3929114	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0241935
20	3929163	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.0636364
20	5194893	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.517241
20	5195159	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.225806
20	5996003	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	5996026	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.190476
20	5996152	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.2
20	5996213	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.454545
20	5996231	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.4
20	5996285	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	5997630	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	5997631	A->G	+	ENSG00000125885	MCM8	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	10457640	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	10457645	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	10460001	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10460060	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.3
1	15664087	A->G	+	ENSG00000197312	DDI2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	19216129	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.0555556
1	19217414	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.130435
1	19217508	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.1875
1	19217515	A->G	-	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.214286
1	19260011	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0238095
1	23961914	A->G	+	ENSG00000189266	PNRC2	protein_coding	three_prime_utr	.	.	Alu	0.460526
1	23966364	A->G	-	ENSG00000188529	SRSF10	protein_coding	three_prime_utr	.	.	Alu	0.583333
1	28335065	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.9375
1	28335145	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28335146	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	28335256	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.125
1	28498909	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	28499158	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	28499235	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	28499277	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	28499307	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.15
1	28499415	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	32632282	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32683029	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	32683124	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	32683659	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	32683665	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.483871
1	35602693	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.030303
1	35856666	A->G	+	ENSG00000134698	AGO4	protein_coding	three_prime_utr	.	.	Alu	0.0298507
1	35856711	A->G	+	ENSG00000134698	AGO4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	36057002	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36063818	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	36063848	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.25
1	36063861	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36063878	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36063888	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.555556
1	36063894	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	36063948	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	36063955	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	36063974	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	36063981	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	36063998	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	36064020	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	36064170	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.4
1	36064196	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36064259	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	36064260	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	36064269	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	36064286	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	36064896	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	36069135	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.45
1	36069157	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	36069162	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	36069173	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.6
1	36069181	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	36069205	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.25
1	36069221	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	36069229	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	36069243	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.461538
1	36069338	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	36069339	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	36069356	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.5
1	36069378	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	36069892	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	36069937	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.5
1	37861482	A->G	-	ENSG00000230955	AL929472.2	antisense	three_prime_utr	.	.	Alu	0.0615385
1	43412413	A->G	+	ENSG00000198198	SZT2	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	43412455	A->G	+	ENSG00000198198	SZT2	protein_coding	three_prime_utr	.	.	Alu	0.3
1	43412459	A->G	+	ENSG00000198198	SZT2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	43412460	A->G	+	ENSG00000198198	SZT2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	45509514	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	45509521	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.25
1	45509578	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.25
1	45509594	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	45509597	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	45509865	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	45509894	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	45509900	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	45509901	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	45509916	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	45509998	A->G	+	ENSG00000132763	MMACHC	protein_coding	three_prime_utr	.	.	Alu	0.5
1	52350831	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	52350883	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	52350884	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	52350919	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52351641	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	52409490	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	52409491	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	52823222	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	52823225	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.347826
1	52823244	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	52823247	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	52824039	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	52824078	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	52824518	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	52824519	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	52824524	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	52824627	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	54030539	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.25
1	85653529	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.0246914
1	85653636	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	92396849	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.3
1	92396874	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.3
1	92397125	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.4
1	92397127	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.4
1	92397151	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	92397156	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	92397207	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	92397237	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	92397331	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	92397339	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	92398060	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	92398099	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	92400347	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	92400397	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	92400405	A->G	+	ENSG00000122484	RPAP2	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	92509607	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	92509610	A->G	-	ENSG00000067208	EVI5	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	93364971	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	20251058	A->G	-	ENSG00000055917	PUM2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	23749430	A->G	-	ENSG00000119778	ATAD2B	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	24000294	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0333333
2	24000296	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	24000380	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0888889
2	24000389	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	24001092	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	24001143	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	24001164	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	24001187	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	24001199	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	24001252	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	24001840	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	24002258	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	24002459	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	1
2	24002461	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	24002467	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.529412
2	24002576	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	26779939	A->G	+	ENSG00000213699	SLC35F6	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	26780069	A->G	+	ENSG00000213699	SLC35F6	protein_coding	three_prime_utr	.	.	Alu	0.0298507
2	27315763	A->G	-	ENSG00000115204	MPV17	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	32307765	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	32308227	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	32308625	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	32309326	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.5
2	32309752	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.1
2	32309758	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	32309769	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.538462
2	32309792	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	32309806	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	32309828	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	32310249	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	32314512	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32314521	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37100446	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0819672
2	37100519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.851852
2	37100523	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4
2	37100559	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.694444
2	37100857	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.078125
2	37100865	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.102941
2	37100870	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.463768
2	37100873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37100899	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	37100932	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4375
2	37100939	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.47619
2	37100944	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.355556
2	37100954	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.304348
2	37101248	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	37101621	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.148936
2	37101657	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
2	37102091	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
2	37102177	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0520833
2	37102178	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0306122
2	37102240	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.04
2	37102241	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.06
2	37103369	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	37103375	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.114286
2	37103378	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.205882
2	37103391	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	37103399	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	37103964	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0350877
2	37103992	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
2	37104077	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	37104107	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	37104126	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37104132	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.138889
2	37104786	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.551724
2	37104790	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.16129
2	37104873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0655738
2	37104881	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.196078
2	37202367	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	37202480	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0508475
2	37202483	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.258065
2	37202484	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.254237
2	37202485	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	37202486	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0634921
2	37202492	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0447761
2	37202494	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0298507
2	37204452	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0350877
2	38784516	A->G	+	ENSG00000152147	GEMIN6	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	69459337	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0277778
2	69459441	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
2	69461621	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	69461622	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.162162
2	69461623	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.102564
2	69461663	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
2	69461717	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	69461720	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	69461724	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	69461736	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	69461769	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.346154
2	69461770	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	69461771	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	69461774	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	69461785	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	69461859	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	69461865	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	69462499	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	69462513	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	69462516	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.85
2	69462522	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	69462567	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.162791
2	69462570	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	69462579	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	69462593	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.134615
2	69462594	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
2	69462613	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	69462619	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	69462638	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	69463467	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	69463636	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	69463726	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	69463740	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.16
2	75663596	A->G	+	ENSG00000115364	MRPL19	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	75663644	A->G	+	ENSG00000115364	MRPL19	protein_coding	three_prime_utr	.	.	Alu	0.2
2	85547954	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	85548113	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.2
2	85549525	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	85549633	A->G	-	ENSG00000115486	GGCX	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	86022749	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	86022817	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	96249500	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	96249575	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	97163607	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.148148
2	97163615	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	97163705	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.35
2	97163712	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	97163715	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.5
2	97163717	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	10150949	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0367647
3	10151114	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	10151674	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0615385
3	15072187	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.2
3	15072229	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	15072270	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	15072309	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.125
3	15072786	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	15072897	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.3
3	15072914	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.3125
3	15072947	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	23921784	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	23921968	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	23922067	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	23922102	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	23922160	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.125
3	40462561	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.538462
3	40462583	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.590909
3	40463183	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	40536319	A->G	+	ENSG00000172888	ZNF621	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	40537352	A->G	+	ENSG00000172888	ZNF621	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	44438188	A->G	-	ENSG00000225873	LINC00694	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.181818
3	44749167	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0298507
3	44749356	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0851064
3	45680363	A->G	+	ENSG00000230530	LIMD1-AS1	bidirectional_promoter_lncRNA	three_prime_utr	.	.	Alu	0.142857
3	45680688	A->G	+	ENSG00000230530	LIMD1-AS1	bidirectional_promoter_lncRNA	three_prime_utr	.	.	Alu	0.166667
3	45680810	A->G	+	ENSG00000230530	LIMD1-AS1	bidirectional_promoter_lncRNA	three_prime_utr	.	.	Alu	0.105263
3	48749657	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0298507
3	48749677	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0307692
3	48749681	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	48749686	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0333333
3	48750063	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.125
3	48750196	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.04
3	48750285	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.028169
3	49359890	A->G	-	ENSG00000067560	RHOA	protein_coding	three_prime_utr	.	.	Alu	0.108614
3	49415405	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	57563271	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.25
3	57563272	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	57563273	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.545455
3	57563763	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.125
3	57563777	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	57564778	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	57564806	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	57626547	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	57626553	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	57627322	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	58318847	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.08
3	58321070	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.375
3	58321072	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.125
3	58321100	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	72976132	A->G	+	ENSG00000172986	GXYLT2	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	94128077	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	15850045	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.0322581
4	15850172	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.0588235
4	15850178	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.0333333
4	17626100	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.115385
4	17626122	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.0645161
4	17626148	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	17626149	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.1
4	17626924	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	17626925	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	17626928	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17627012	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	17627028	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17627352	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	17627816	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17632200	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	17632201	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17801914	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.829268
4	17801930	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	39549157	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.130435
4	39549161	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0833333
4	39549361	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0952381
4	39549411	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.238095
4	39549467	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0952381
4	39549547	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.2
4	39550402	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.117647
4	39551034	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.153846
4	67469376	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.461538
4	67469415	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	67469434	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.125
4	67469452	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	67469462	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.210526
4	67469470	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	67469474	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	67469502	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	67469572	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.15
4	67469594	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	67469624	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	67470326	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.590909
4	67470327	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	67470336	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.2
4	67470400	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.714286
4	67470406	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	67470409	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	67470450	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.590909
4	67470460	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.454545
4	67470485	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	67470489	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	70816579	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	70817307	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	70817324	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.5
4	70818154	A->G	-	ENSG00000132463	GRSF1	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	73057039	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	73057270	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.05
4	73057393	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.0465116
4	83460193	A->G	-	ENSG00000163319	MRPS18C	protein_coding	three_prime_utr	.	.	Alu	0.3
4	83460210	A->G	-	ENSG00000163319	MRPS18C	protein_coding	three_prime_utr	.	.	Alu	0.2
4	83460230	A->G	-	ENSG00000163319	MRPS18C	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	83460243	A->G	-	ENSG00000163319	MRPS18C	protein_coding	three_prime_utr	.	.	Alu	0.4
4	83460830	A->G	-	ENSG00000163319	MRPS18C	protein_coding	three_prime_utr	.	.	Alu	0.4
4	88258443	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	88258465	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	88260273	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.125
5	34906529	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	34908344	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	34908369	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.05
5	34908379	A->G	-	ENSG00000113456	RAD1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	37290286	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0727273
5	37290337	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	37291314	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0652174
5	37291318	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	37291439	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	40762088	A->G	-	ENSG00000132356	PRKAA1	protein_coding	three_prime_utr	.	.	Alu	0.047619
5	40825883	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0338983
5	40831037	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	40831062	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	40831076	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	43380597	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	43380679	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	43381641	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.125
5	69282051	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.931034
5	69282055	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.32
5	69282080	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	69282093	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.173913
5	69282155	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.172414
5	69282317	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.103448
5	69282344	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.548387
5	69282345	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	69282374	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.785714
5	69282414	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	69282418	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.26087
5	69282504	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.205128
5	75377895	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.2
5	75378296	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	75378333	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	75378337	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.266667
5	75378344	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	75378373	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.416667
5	75378374	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	75379143	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.384615
5	75599173	A->G	+	ENSG00000248881	AC010245.1	antisense	three_prime_utr	.	.	Alu	0.111111
5	78777635	A->G	-	ENSG00000113273	ARSB	protein_coding	three_prime_utr	.	.	Alu	0.031746
5	78777740	A->G	-	ENSG00000113273	ARSB	protein_coding	three_prime_utr	.	.	Alu	0.0333333
5	78777805	A->G	-	ENSG00000113273	ARSB	protein_coding	three_prime_utr	.	.	Alu	0.0606061
5	80876407	A->G	+	ENSG00000113318	MSH3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	81415723	A->G	-	ENSG00000145687	SSBP2	protein_coding	three_prime_utr	.	.	Alu	0.5
5	81415764	A->G	-	ENSG00000145687	SSBP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	96774840	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.084507
6	13288416	A->G	+	ENSG00000215022	AL008729.1	antisense	three_prime_utr	.	.	Alu	0.4375
6	13787979	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	13787980	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.136364
6	13787983	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	13788011	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
6	13788058	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.047619
6	13789279	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	13789289	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	13789318	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.461538
6	13789319	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	13789354	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	13790525	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	13790699	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	25984677	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	25986312	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	25988574	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.3
6	25988595	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.5
6	25988611	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.25
6	25988633	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	25988635	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	25988694	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	25988713	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.2
6	31510615	A->G	+	ENSG00000204516	MICB	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	32579004	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	three_prime_utr	.	.	Alu	0.411765
6	36490492	A->G	+	ENSG00000112078	KCTD20	protein_coding	three_prime_utr	.	.	Alu	0.021978
6	36605234	A->G	+	ENSG00000112081	SRSF3	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	42077807	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.217391
6	42077825	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	42077939	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	42078016	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42078151	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.05
6	42078152	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.05
6	42078164	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0444444
6	42079042	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42079662	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	42079816	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42080447	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0540541
6	42080472	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	42081576	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.2
6	42207354	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0454545
6	42207426	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0454545
6	42207448	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	42886841	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
6	42886883	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0291262
6	42887363	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0275229
6	42887387	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0595238
6	42887533	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42888592	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0842105
6	43615476	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	44450064	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0731707
6	73424992	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	73516437	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0420168
6	78899622	A->G	+	ENSG00000146243	IRAK1BP1	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	78899647	A->G	+	ENSG00000146243	IRAK1BP1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	78899678	A->G	+	ENSG00000146243	IRAK1BP1	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	89366335	A->G	-	ENSG00000025039	RRAGD	protein_coding	three_prime_utr	.	.	Alu	0.0434783
6	89634488	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.08
6	98873604	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	98873605	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	17344710	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0657895
7	17344756	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0483871
7	17344782	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0289855
7	17344804	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	21901493	A->G	-	ENSG00000164649	CDCA7L	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	25120188	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.456522
7	25120191	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.145833
7	25120192	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	25120194	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0434783
7	25120223	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	25120250	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.05
7	25120253	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	25120279	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	25120289	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.108696
7	25120290	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	25120313	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.155556
7	25120328	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.05
7	25120367	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
7	25121002	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.031746
7	25121012	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0847458
7	25121048	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0344828
7	25121085	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	25121116	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.236842
7	25121319	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.028169
7	25121360	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	25121730	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0238095
7	25121845	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0307692
7	38723682	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.176471
7	38724621	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0533333
7	38724696	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	38724754	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	38724838	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	44801788	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0514706
7	44801789	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.129496
7	44802500	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.252252
7	47963794	A->G	-	ENSG00000136273	HUS1	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	47964213	A->G	-	ENSG00000136273	HUS1	protein_coding	three_prime_utr	.	.	Alu	0.107143
7	55956200	A->G	+	ENSG00000239789	MRPS17	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	56011429	A->G	-	ENSG00000146733	PSPH	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	66153205	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	66153223	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	66153248	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	66154006	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	74231772	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	74231944	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
7	74231953	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.027027
7	77779903	A->G	+	ENSG00000187257	RSBN1L	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	77780092	A->G	+	ENSG00000187257	RSBN1L	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	90386002	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	90387082	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.0952381
7	92537222	A->G	+	ENSG00000127993	RBM48	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	99493499	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.0277778
8	11843060	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0645161
8	11843077	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	22253841	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	29063918	A->G	+	ENSG00000147421	HMBOX1	protein_coding	three_prime_utr	.	.	Alu	0.172414
8	37860404	A->G	-	ENSG00000280064	AC130304.1	TEC	three_prime_utr	.	.	Alu	0.0232558
8	38972226	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0357143
8	38972407	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0206186
8	38972969	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.030303
8	41929819	A->G	-	ENSG00000083168	KAT6A	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	43020544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43021570	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
8	43021876	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.785714
8	43027004	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	43027009	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43028273	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.5
8	43028274	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43123156	A->G	+	ENSG00000185900	POMK	protein_coding	three_prime_utr	.	.	Alu	0.0338983
8	43123157	A->G	+	ENSG00000185900	POMK	protein_coding	three_prime_utr	.	.	Alu	0.031746
8	43123169	A->G	+	ENSG00000185900	POMK	protein_coding	three_prime_utr	.	.	Alu	0.0517241
8	51817881	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	0.514286
8	51818304	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	1
8	55825112	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	56067586	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	94792422	A->G	+	ENSG00000254307	AP003692.1	antisense	three_prime_utr	.	.	Alu	0.115385
8	94792434	A->G	+	ENSG00000254307	AP003692.1	antisense	three_prime_utr	.	.	Alu	0.391304
8	94792448	A->G	+	ENSG00000254307	AP003692.1	antisense	three_prime_utr	.	.	Alu	0.791667
8	94792457	A->G	+	ENSG00000254307	AP003692.1	antisense	three_prime_utr	.	.	Alu	0.12
8	97726803	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0384615
8	97726828	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0333333
8	97727280	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0277778
8	97728472	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.057971
8	97728715	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0461538
8	97728723	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.031746
9	15460520	A->G	+	ENSG00000164975	SNAPC3	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	15461376	A->G	+	ENSG00000164975	SNAPC3	protein_coding	three_prime_utr	.	.	Alu	0.105263
9	15461397	A->G	+	ENSG00000164975	SNAPC3	protein_coding	three_prime_utr	.	.	Alu	0.222222
9	15461442	A->G	+	ENSG00000164975	SNAPC3	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	15461445	A->G	+	ENSG00000164975	SNAPC3	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	36215268	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	36216944	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.190476
9	37503463	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0416667
9	69075750	A->G	+	ENSG00000165060	FXN	protein_coding	three_prime_utr	.	.	Alu	0.2
9	69075794	A->G	+	ENSG00000165060	FXN	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	69075810	A->G	+	ENSG00000165060	FXN	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	69075940	A->G	+	ENSG00000165060	FXN	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	71973065	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	72353562	A->G	-	ENSG00000107372	ZFAND5	protein_coding	three_prime_utr	.	.	Alu	0.0465116
9	76506348	A->G	+	ENSG00000187210	GCNT1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
9	78271830	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.2
9	78272261	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.5
9	83898918	A->G	-	ENSG00000165115	KIF27	protein_coding	three_prime_utr	.	.	Alu	0.928571
9	86266970	A->G	-	ENSG00000135070	ISCA1	protein_coding	three_prime_utr	.	.	Alu	0.294118
9	96894904	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.0909091
9	96903076	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.1875
9	96903077	A->G	-	ENSG00000196312	MFSD14C	protein_coding	three_prime_utr	.	.	Alu	0.125
9	97673077	A->G	+	ENSG00000136937	NCBP1	protein_coding	three_prime_utr	.	.	Alu	0.08
9	97673078	A->G	+	ENSG00000136937	NCBP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	98085403	A->G	-	ENSG00000106785	TRIM14	protein_coding	three_prime_utr	.	.	Alu	0.0864198
10	20284492	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.111111
10	20284568	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.08
10	27111282	A->G	-	ENSG00000136758	YME1L1	protein_coding	three_prime_utr	.	.	Alu	0.0359281
10	30311803	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	30312053	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.08
10	30312078	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.137931
10	30312128	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	30312507	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	49973592	A->G	+	ENSG00000178440	LINC00843	lincRNA	three_prime_utr	.	.	Alu	0.166667
10	49973602	A->G	+	ENSG00000178440	LINC00843	lincRNA	three_prime_utr	.	.	Alu	0.272727
10	68479561	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	68479638	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	68479942	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	68481113	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	68481158	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	71365146	A->G	+	ENSG00000279406	AL359183.1	TEC	three_prime_utr	.	.	Alu	0.2
10	72234025	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.454545
10	72234089	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0909091
10	72234100	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	72234106	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	72234107	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	72235024	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0487805
10	73250068	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0232558
10	73250158	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0405405
10	92480849	A->G	-	ENSG00000119912	IDE	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	94330610	A->G	-	ENSG00000138193	PLCE1	protein_coding	three_prime_utr	.	.	Alu	0.2
10	94610363	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0869565
10	94610689	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0392157
10	94610700	A->G	+	ENSG00000244332	AL138759.1	sense_overlapping	three_prime_utr	.	.	Alu	0.037037
10	94612730	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	94612761	A->G	+	ENSG00000119969	HELLS	protein_coding	three_prime_utr	.	.	Alu	0.0526316
10	99713714	A->G	+	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	99713715	A->G	+	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.25
10	99713750	A->G	+	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	99713890	A->G	+	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	99713926	A->G	+	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.285714
10	99713935	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	31431024	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.357143
11	31431185	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	31431203	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.5
11	31431240	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.4
11	31431241	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.6
11	31431263	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	32603825	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	32603836	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.25
11	32603837	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.846154
11	32603838	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.461538
11	32603875	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.666667
11	32603917	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.263158
11	32603920	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.473684
11	32603928	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	32603976	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.1875
11	32603987	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.416667
11	32604008	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.307692
11	32604009	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.461538
11	32604022	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	32604346	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.233333
11	32856932	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
11	32857075	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	32857094	A->G	+	ENSG00000135378	PRRG4	protein_coding	three_prime_utr	.	.	Alu	0.25
11	36487083	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.3
11	62751144	A->G	-	ENSG00000185670	ZBTB3	protein_coding	three_prime_utr	.	.	Alu	0.125
11	62830471	A->G	-	ENSG00000162236	STX5	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	65776006	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0390625
11	65776028	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0916667
11	65776989	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0233645
11	65777038	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0281124
11	66649792	A->G	+	ENSG00000173933	RBM4	protein_coding	three_prime_utr	.	.	Alu	0.107143
11	72286640	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.5
11	72286645	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72286668	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.125
11	72286737	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	72286739	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.538462
11	72286752	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	72287378	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.1875
11	72287396	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.117647
11	72287409	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	72287473	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.125
11	72288262	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	72288270	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	72288285	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.428571
11	72288291	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.866667
11	72288408	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	72288409	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	72288420	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	72288442	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.9
11	72290700	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0810811
11	72290727	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0408163
11	72290832	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	72290861	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.0714286
11	72291343	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72291799	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.75
11	72291800	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.461538
11	72291921	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72291943	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	72291967	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	74456263	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.222222
11	74456324	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.272727
11	88322396	A->G	-	ENSG00000109861	CTSC	protein_coding	three_prime_utr	.	.	Alu	0.25
11	88322415	A->G	-	ENSG00000109861	CTSC	protein_coding	three_prime_utr	.	.	Alu	0.266667
11	93764700	A->G	+	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	93764722	A->G	+	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	94416601	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.291667
11	94416602	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.0416667
11	94416603	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.0416667
11	94416611	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.93617
11	94416652	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	94416656	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	1
11	94417003	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.125
11	94417004	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.533333
11	94417101	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.615385
11	94417105	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.923077
11	94417114	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	1
11	94417115	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.636364
11	94417133	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.25
11	94417288	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.269231
11	94417289	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	10191440	A->G	+	ENSG00000165685	TMEM52B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	14498895	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	14498926	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	27421321	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	27421344	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	27421359	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	27421384	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	27421394	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	27421494	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	27421500	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.461538
12	27423536	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.4
12	27423590	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.1
12	27423591	A->G	+	ENSG00000029153	ARNTL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	32744592	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.0363636
12	32744593	A->G	+	ENSG00000087470	DNM1L	protein_coding	three_prime_utr	.	.	Alu	0.037037
12	42233636	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	42233640	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	42233676	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	42233691	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	42233692	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.3
12	42233725	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	42233740	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.15
12	42233786	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	42233926	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
12	42233988	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.277778
12	42234005	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	42234071	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	42234135	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	42234905	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	42234944	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.148148
12	42234981	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	42234986	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	43720281	A->G	-	ENSG00000129317	PUS7L	protein_coding	three_prime_utr	.	.	Alu	0.2
12	43720318	A->G	-	ENSG00000129317	PUS7L	protein_coding	three_prime_utr	.	.	Alu	0.25
12	43720457	A->G	-	ENSG00000129317	PUS7L	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	43725513	A->G	-	ENSG00000129317	PUS7L	protein_coding	three_prime_utr	.	.	Alu	0.25
12	43726577	A->G	-	ENSG00000129317	PUS7L	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	43788723	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.416667
12	43788726	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	43788808	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	49273459	A->G	+	ENSG00000167553	TUBA1C	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	54233870	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0294118
12	54234096	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0277778
12	54234097	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0277778
12	54235425	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.177419
12	54238200	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	55821614	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	55821662	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.4
12	55821672	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	55821705	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	55821746	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	55821778	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	55821789	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	55821801	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	55821835	A->G	+	ENSG00000135392	DNAJC14	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	59783745	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	59783751	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	59783752	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.294118
12	64191856	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.136364
12	64192221	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	64192222	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	64192236	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	64192389	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.3
12	64192397	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.5
12	64192433	A->G	-	ENSG00000174206	C12orf66	protein_coding	three_prime_utr	.	.	Alu	0.25
12	64448943	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0333333
12	64449015	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0333333
12	64450332	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.0481928
12	66121379	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	66121380	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	66121388	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.2
12	66121727	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.7
12	66123323	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0350877
12	66338508	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.1
12	66339350	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	66339376	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	66339403	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	66339506	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.3
12	66339507	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.3
12	66339640	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.2
12	66339641	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.2
12	66342584	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	66342726	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.115385
12	66342821	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	66342824	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.125
12	66342879	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	66343331	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.178571
12	66343389	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	66343400	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	66343410	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	66343460	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	66343509	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	66344565	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0512821
12	66344571	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	66344615	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	68843233	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.25
12	68843234	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.102804
12	68843262	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	68843263	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.462185
12	68843273	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	68843276	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.113821
12	68843277	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0564516
12	68843293	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0630631
12	68843726	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0847458
12	68843729	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	68843730	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.128205
12	68843746	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0733945
12	68843749	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.297297
12	68843754	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.412844
12	68843772	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0825688
12	68843778	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.103093
12	68843847	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.120482
12	71702426	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.25
12	93503481	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	93503484	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.09375
12	93504185	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	93504192	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	93504197	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.2
12	93504220	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.136364
12	93504227	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	93504240	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	93504241	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	93504258	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	93504271	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.125
12	93504284	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	93504321	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	93504324	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	93504330	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	93504350	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.4
12	93504375	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	93504376	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.368421
12	93504383	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	93504402	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	93508003	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	93508024	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	93508047	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	93508064	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	93508081	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	93508086	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.428571
12	93508092	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	93508129	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.294118
12	93508919	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.714286
12	93508926	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.375
12	93508946	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.6875
12	93508997	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	93509026	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	93509038	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	93509041	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	93509526	A->G	+	ENSG00000243015	RN7SL737P	misc_RNA	three_prime_utr	.	.	Alu	0.454545
12	93509534	A->G	+	ENSG00000243015	RN7SL737P	misc_RNA	three_prime_utr	.	.	Alu	0.277778
12	93509548	A->G	+	ENSG00000243015	RN7SL737P	misc_RNA	three_prime_utr	.	.	Alu	0.409091
12	93512341	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.125
12	93512353	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	93512377	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.125
12	93512384	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.25
12	98548912	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0497238
12	98602258	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	98602290	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.125
12	98602291	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	98602294	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.352941
12	98604515	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	98604522	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	98604575	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	98604576	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	98604593	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	98604787	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.357143
12	98604855	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.409091
12	98604856	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.347826
12	98604862	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	98604889	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	98604891	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	98604892	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.3
12	98604904	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.2
12	98604972	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	98604977	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	98604992	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	98605164	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.3
12	98605165	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.5
12	98605171	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.2
12	98605178	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.923077
12	98605210	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	98605294	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.125
12	98605298	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	98605315	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.352941
12	98605585	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	98605709	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	98605726	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	98605770	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	98605880	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.137931
12	98605919	A->G	+	ENSG00000075415	SLC25A3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	98733631	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
12	98733673	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.04
13	19672244	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0425532
13	19672845	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0454545
13	21375096	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0224719
13	45030401	A->G	+	ENSG00000223732	AL359706.1	lincRNA	three_prime_utr	.	.	Alu	0.0952381
13	45030529	A->G	+	ENSG00000223732	AL359706.1	lincRNA	three_prime_utr	.	.	Alu	0.166667
13	49913179	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	49913217	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.176471
13	49913257	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.266667
13	49913298	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.214286
13	49913308	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	1
13	49913333	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.214286
13	49913337	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	49913344	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.5
13	49913595	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.384615
13	49913651	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.454545
13	49913687	A->G	-	ENSG00000123178	SPRYD7	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	50971657	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.111111
13	50972226	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	50972393	A->G	+	ENSG00000136104	RNASEH2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	52689700	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.6
13	52689713	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.1
13	52689719	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.238095
13	52689744	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.115385
13	52689754	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.148148
13	52689768	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.148148
13	52689770	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.344828
13	52689793	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52689819	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
13	52689832	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.352941
13	52689848	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.641026
13	52689891	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.176471
13	52689901	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
13	52689919	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.114286
13	52691122	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.028169
13	52691124	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.109589
13	52691128	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0307692
13	52691135	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.05
13	52691138	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0535714
13	52691168	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
13	52691181	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
13	52691192	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52691245	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	52694709	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
13	52694873	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
13	52694880	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
13	52694896	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	52698671	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
13	95580217	A->G	+	ENSG00000134874	DZIP1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	20366898	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	20366901	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	20366933	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	20366937	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.175
14	20366962	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.137931
14	20366980	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	20367007	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.130435
14	20367031	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.5
14	20367107	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	20367129	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.6
14	20367881	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	20367882	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	21460331	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.148148
14	21460342	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	21460419	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	21460499	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	21460522	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.3
14	21460523	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.190476
14	21460541	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	21460547	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.222222
14	21460786	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0540541
14	21460839	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.6
14	21460840	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	21460855	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.0625
14	31093530	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.08
14	31093531	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.217391
14	31093551	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.347826
14	31093586	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.5
14	31093588	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	31093596	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	31093627	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	31093630	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.6
14	31093680	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	31093698	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	31093916	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	31094032	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	31094036	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	31094054	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.294118
14	31094371	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.210526
14	31094385	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	31094390	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	31094398	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31094634	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	31095073	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	31095088	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31095135	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.148148
14	31095146	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.130435
14	31095165	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	31095444	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.470588
14	31095491	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	31095494	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.642857
14	31095516	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	31095543	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	31095546	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	31095556	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	31095608	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	31095616	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.222222
14	31095628	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	31095658	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	31095859	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	31095991	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.461538
14	31096000	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	31096005	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	31096006	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.571429
14	31447699	A->G	-	ENSG00000250365	AL139353.2	antisense	three_prime_utr	.	.	Alu	0.0769231
14	31447712	A->G	-	ENSG00000250365	AL139353.2	antisense	three_prime_utr	.	.	Alu	0.115385
14	31447738	A->G	-	ENSG00000250365	AL139353.2	antisense	three_prime_utr	.	.	Alu	0.0625
14	35274207	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	35274533	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.3
14	35277105	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	35277129	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	49576248	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.2
14	49576330	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.25
14	49577024	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50326891	A->G	+	ENSG00000259071	AL359397.2	lincRNA	three_prime_utr	.	.	Alu	0.111111
14	50327725	A->G	+	ENSG00000259071	AL359397.2	lincRNA	three_prime_utr	.	.	Alu	0.0714286
14	52643014	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.615385
14	55367700	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.235294
14	57201802	A->G	-	ENSG00000070367	EXOC5	protein_coding	three_prime_utr	.	.	Alu	0.2
14	61795894	A->G	+	ENSG00000023608	SNAPC1	protein_coding	three_prime_utr	.	.	Alu	0.5
14	70367413	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	70367510	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	70369289	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	73885182	A->G	+	ENSG00000140043	PTGR2	protein_coding	three_prime_utr	.	.	Alu	0.2
14	74058061	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
14	74058146	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	74058241	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.175
14	74200121	A->G	+	ENSG00000205659	LIN52	protein_coding	three_prime_utr	.	.	Alu	1
14	74735775	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
14	74738144	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.6
14	74738147	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	74738150	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	76205135	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	76205209	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	92163043	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	92163087	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.04
14	92163104	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.0298507
14	92163151	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.02
14	92163165	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.03
14	92163166	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
14	92163831	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.032967
14	92163860	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.0422535
14	92163870	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.0307692
14	92163910	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
14	92163992	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
14	92166446	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	92166447	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	92166533	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	92167195	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.3
14	92167264	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.461538
14	92167286	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.375
14	92168723	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	92168742	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	92168751	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.2
14	92168810	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.125
14	92169928	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	92171196	A->G	+	ENSG00000165934	CPSF2	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	31376805	A->G	+	ENSG00000169926	KLF13	protein_coding	three_prime_utr	.	.	Alu	0.525641
15	34231253	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0645161
15	34231275	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0434783
15	40662758	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.264706
15	40662773	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
15	40662782	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.075
15	40662866	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.121951
15	40662872	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.097561
15	40662904	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.84375
15	40662905	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.147059
15	40662910	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	40662942	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
15	40663129	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.7
15	40663241	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	40663247	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.5
15	40663258	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.266667
15	40663266	A->G	+	ENSG00000137812	KNL1	protein_coding	three_prime_utr	.	.	Alu	0.727273
15	42532232	A->G	+	ENSG00000261684	AC018362.1	antisense	three_prime_utr	.	.	Alu	0.0508475
15	42539057	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.3
15	42539589	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	42539951	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.363636
15	42541463	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.5
15	42543340	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0512821
15	42543378	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0540541
15	42567343	A->G	+	ENSG00000261822	AC018362.2	antisense	three_prime_utr	.	.	Alu	0.0555556
15	42567448	A->G	+	ENSG00000261822	AC018362.2	antisense	three_prime_utr	.	.	Alu	0.0377358
15	42567909	A->G	+	ENSG00000261822	AC018362.2	antisense	three_prime_utr	.	.	Alu	0.0645161
15	42568004	A->G	+	ENSG00000261822	AC018362.2	antisense	three_prime_utr	.	.	Alu	0.0465116
15	49126927	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.0888889
15	50558293	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.2
15	50558299	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.2
15	50558300	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.2
15	50558445	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.181818
15	50558490	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.210526
15	50558513	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.125
15	50558520	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.533333
15	50558521	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.25
15	50558527	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.125
15	50558806	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.2
15	50559223	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.230769
15	50559252	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.142857
15	50559280	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.142857
15	50559381	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.230769
15	50703097	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.125
15	50703163	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	50705258	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	50705259	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.210526
15	51912272	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	51912316	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.294118
15	51913043	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.296296
15	51913048	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.285714
15	51913067	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	51913073	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	51913074	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.652174
15	51913099	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.52
15	51913100	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.16
15	51913103	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.565217
15	51913155	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	51913156	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	51913158	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	51913233	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	51913234	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	51913246	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	51913793	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0576923
15	51914499	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0540541
15	51914544	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.08
15	51914597	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	51914600	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	51914788	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	51914897	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.192308
15	51914929	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	51914953	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.318182
15	51914954	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.65
15	51914968	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.173913
15	51914973	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.1
15	55317542	A->G	-	ENSG00000225973	PIGBOS1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	60422304	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	60422592	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	60422701	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	60422704	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.130435
15	63153613	A->G	-	ENSG00000185088	RPS27L	protein_coding	three_prime_utr	.	.	Alu	0.0465116
15	63153668	A->G	-	ENSG00000185088	RPS27L	protein_coding	three_prime_utr	.	.	Alu	0.0540541
15	64140684	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	64140687	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	64140701	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.125
15	64140819	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.1
15	64140837	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	64140847	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	64364798	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.0392157
15	64365301	A->G	-	ENSG00000166803	PCLAF	protein_coding	three_prime_utr	.	.	Alu	0.115385
15	65149353	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.05
15	65150156	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0454545
15	66333647	A->G	-	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.2
15	72590722	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.230769
15	75371181	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.09375
15	75936700	A->G	-	ENSG00000167196	FBXO22	protein_coding	three_prime_utr	.	.	Alu	0.2
15	75936753	A->G	-	ENSG00000167196	FBXO22	protein_coding	three_prime_utr	.	.	Alu	0.25
15	84641585	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.157895
15	84642266	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.0606061
15	84642302	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.105263
15	84642307	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.111111
15	84642543	A->G	-	ENSG00000277578	RF00017	misc_RNA	three_prime_utr	.	.	Alu	0.111111
15	90273792	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90273921	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.1875
15	90273942	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90273948	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.25
15	90274051	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	90274239	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90274603	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.3
15	90274636	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90276177	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90276841	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.277778
15	90276851	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	90276863	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	11849259	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.461538
16	11849274	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	11849275	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	11849283	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	14668793	A->G	+	ENSG00000103429	BFAR	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	15408702	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	15409221	A->G	+	ENSG00000156968	MPV17L	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	19702046	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	19702051	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.428571
16	19702736	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.461538
16	19702748	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	19702758	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.32
16	19702774	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.12
16	19702825	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	19704196	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	19704207	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	19704220	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.368421
16	19704266	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	19704288	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	19704336	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.08
16	19704508	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	19705657	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	19705707	A->G	-	ENSG00000103550	KNOP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	20703639	A->G	+	ENSG00000005187	ACSM3	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	20703661	A->G	+	ENSG00000005187	ACSM3	protein_coding	three_prime_utr	.	.	Alu	0.3
16	22285609	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	23463718	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	23463730	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	23463731	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	23465205	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	23672944	A->G	+	ENSG00000166847	DCTN5	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	23673329	A->G	+	ENSG00000166847	DCTN5	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29665276	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.020284
16	29668041	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0823864
16	29668111	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105
16	29668184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0614973
16	29669225	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29669232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29669305	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.020202
16	29669358	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	30531621	A->G	-	ENSG00000261459	AC002310.5	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	30531704	A->G	-	ENSG00000261459	AC002310.5	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	31090863	A->G	-	ENSG00000255439	AC135050.2	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	46797499	A->G	-	ENSG00000155330	C16orf87	protein_coding	three_prime_utr	.	.	Alu	0.2
16	46801251	A->G	-	ENSG00000155330	C16orf87	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	48352531	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.121212
16	48353356	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	48354398	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	48354406	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	48354445	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0888889
16	50673146	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.075
16	66889544	A->G	+	ENSG00000172840	PDP2	protein_coding	three_prime_utr	.	.	Alu	0.3
16	67681506	A->G	-	ENSG00000141098	GFOD2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	67681926	A->G	-	ENSG00000141098	GFOD2	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	67683053	A->G	-	ENSG00000141098	GFOD2	protein_coding	three_prime_utr	.	.	Alu	0.3
16	67684613	A->G	-	ENSG00000141098	GFOD2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	69322902	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	69323005	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	69323318	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.162162
16	69323422	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	69323469	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.12
16	69325479	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	69325554	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	69325570	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.2
16	69327463	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	69327791	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	69327832	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	69327852	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.115385
16	69328167	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	69342419	A->G	+	ENSG00000132603	NIP7	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	69356611	A->G	-	ENSG00000132604	TERF2	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	69702644	A->G	+	ENSG00000102908	NFAT5	protein_coding	three_prime_utr	.	.	Alu	0.06
16	70248711	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.046875
16	70249182	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0421053
16	70249316	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	70376815	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	70376839	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	70376840	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	70376848	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70377331	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70377380	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.545455
16	70377461	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.3
16	70378515	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70378580	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	70378590	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	70378751	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	70378752	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	70378867	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70379859	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	70575442	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	70575962	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	70576868	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70576915	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	70576952	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	70576973	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	70576982	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.3
16	70577043	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.3
16	72024890	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	72026816	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.2
16	72026860	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	72026890	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	72026891	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	72026895	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.454545
16	72027265	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	72027392	A->G	+	ENSG00000102967	DHODH	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	74299646	A->G	+	ENSG00000103035	PSMD7	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	75444055	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	75445561	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0333333
16	75446142	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0571429
16	75598175	A->G	-	ENSG00000259992	AC025287.1	processed_transcript	three_prime_utr	.	.	Alu	0.0909091
16	80980779	A->G	-	ENSG00000103121	CMC2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	81383515	A->G	+	ENSG00000261609	GAN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	81386722	A->G	+	ENSG00000272923	AC092139.1	lincRNA	three_prime_utr	.	.	Alu	0.125
16	81387614	A->G	+	ENSG00000261609	GAN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	87403158	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	three_prime_utr	.	.	Alu	1
17	10678962	A->G	-	ENSG00000133028	SCO1	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	17186608	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.102564
17	17189269	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	27312822	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
17	27314483	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	27314850	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	27314949	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	29263415	A->G	-	ENSG00000108256	NUFIP2	protein_coding	three_prime_utr	.	.	Alu	0.509434
17	29560779	A->G	-	ENSG00000168792	ABHD15	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	30186144	A->G	+	ENSG00000126653	NSRP1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
17	30186159	A->G	+	ENSG00000126653	NSRP1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
17	30783460	A->G	-	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.0327869
17	30783495	A->G	-	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.0289855
17	30783565	A->G	-	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.025
17	30895534	A->G	+	ENSG00000176208	ATAD5	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	30895668	A->G	+	ENSG00000176208	ATAD5	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	32373457	A->G	+	ENSG00000010244	ZNF207	protein_coding	three_prime_utr	.	.	Alu	0.4
17	35096262	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.25
17	35096267	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	35096597	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	35096603	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	35096644	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	35098570	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	35098941	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	37477592	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	37477594	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	37477998	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	37478007	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	37478101	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	37611651	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.2
17	37611904	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.333333
17	37611914	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.125
17	37612272	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.125
17	37612304	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.0869565
17	37612327	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.352941
17	37614091	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.0344828
17	39254140	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39254150	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39254175	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	39254188	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39254235	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	39254250	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.190476
17	39254251	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	39254274	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.1
17	39254314	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	39254319	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.352941
17	39254320	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	39254328	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	39255073	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39255609	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0434783
17	39255801	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	39256055	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.1
17	39256077	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	39256095	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	39256151	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	39256238	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.241379
17	39256239	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.107143
17	39256264	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	39256275	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39256277	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.25
17	39257081	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39257082	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39257203	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39259739	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.103448
17	39259792	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	39759377	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	39759378	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.25
17	39759380	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	39760294	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.4
17	39763870	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	39763914	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39763916	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.888889
17	39763952	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.8
17	39763961	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39763992	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39764049	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	39764382	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.7
17	39764408	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39764419	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.545455
17	40302432	A->G	+	ENSG00000094804	CDC6	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	42991953	A->G	+	ENSG00000198863	RUNDC1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	43218074	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	43218118	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0338983
17	43218119	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0327869
17	43218160	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.0877193
17	43218567	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	43218582	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	46941716	A->G	+	ENSG00000108433	GOSR2	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	46941821	A->G	+	ENSG00000108433	GOSR2	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	48864141	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.24
17	48864164	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.08
17	48864203	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	48864303	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.031746
17	48864324	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.037037
17	49295202	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.238095
17	49295203	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.190476
17	49296666	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	49296668	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	49296739	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	49296740	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.205882
17	49830294	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	49831126	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	49831197	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	49831211	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	49831842	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	50964371	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	50964385	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	50964403	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	50964405	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	50964425	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	57836186	A->G	-	ENSG00000181610	MRPS23	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	57972463	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.180328
17	59203508	A->G	+	ENSG00000265415	AC099850.3	antisense	three_prime_utr	.	.	Alu	0.111111
17	62449456	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.08
17	62450361	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	62450362	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	62450395	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.357143
17	62450763	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	62450767	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64322303	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	64322323	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	64468469	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	64468472	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	67338751	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	67338795	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.0697674
17	67339205	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.0882353
17	74746281	A->G	+	ENSG00000172794	RAB37	protein_coding	three_prime_utr	.	.	Alu	0.1
17	75166714	A->G	-	ENSG00000189159	JPT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	75166744	A->G	-	ENSG00000189159	JPT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	75943522	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.075
17	75943979	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.0465116
17	75944014	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.0645161
17	75944754	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.0909091
17	75944923	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.0666667
17	75944995	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.133333
17	75945014	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.0714286
17	80320928	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.666667
17	80320932	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	80320942	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.4
17	80320958	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.181818
18	21630498	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.461538
18	21630507	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	21630533	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.294118
18	21631210	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	21631291	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.08
18	21631541	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	21631554	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	21631566	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.25
18	21631576	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.277778
18	21631643	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.266667
18	21631689	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.0625
18	21631754	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	21632018	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
18	21632300	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	21632307	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
18	21632308	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.0638298
18	21632361	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
18	21632414	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.45
18	21632416	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.210526
18	21632955	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.4
18	21632980	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.2
18	21633057	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
18	21633081	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
18	21633110	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	21633111	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.307692
18	21633112	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.538462
18	32070166	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.115385
18	32070761	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.21875
18	32071301	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.030303
18	32071410	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0206186
18	32072146	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.06
18	36174790	A->G	+	ENSG00000134759	ELP2	protein_coding	three_prime_utr	.	.	Alu	0.217391
18	45984048	A->G	-	ENSG00000152229	PSTPIP2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
18	46080672	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	three_prime_utr	.	.	Alu	0.4
18	50948613	A->G	+	ENSG00000082212	ME2	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	50950741	A->G	+	ENSG00000082212	ME2	protein_coding	three_prime_utr	.	.	Alu	0.105263
18	50950751	A->G	+	ENSG00000082212	ME2	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	50950763	A->G	+	ENSG00000082212	ME2	protein_coding	three_prime_utr	.	.	Alu	0.1
18	58751245	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
18	58751246	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
18	58753226	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.3
18	58753467	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.181818
18	58753469	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.363636
19	10930132	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	11146598	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	11146607	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	11146993	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	11834244	A->G	+	ENSG00000171295	ZNF440	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11913571	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.3
19	12078218	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	12078219	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	12078307	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12079716	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.25
19	12079730	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12079735	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	12081016	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	12081018	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	12632169	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.3
19	12632596	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	12632710	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13773048	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	13773175	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.102564
19	14734248	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0638298
19	14734438	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	14734654	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	14734677	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	16641401	A->G	-	ENSG00000269427	AC024075.3	antisense	three_prime_utr	.	.	Alu	0.235294
19	18365366	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18365455	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.102564
19	18365624	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0327869
19	18366628	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.208333
19	18366731	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	18366733	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.172414
19	18366745	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	18366939	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0925926
19	19681536	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.3
19	19682268	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.538462
19	19682345	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	19682359	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	19682482	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	19682483	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	19683015	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	19792224	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.130435
19	19792245	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.1
19	19792366	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.25
19	19792376	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.538462
19	19792404	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.166667
19	20198243	A->G	+	ENSG00000267383	AC011447.3	antisense	three_prime_utr	.	.	Alu	0.142857
19	20198269	A->G	+	ENSG00000267383	AC011447.3	antisense	three_prime_utr	.	.	Alu	0.142857
19	20198286	A->G	+	ENSG00000267383	AC011447.3	antisense	three_prime_utr	.	.	Alu	0.3
19	20198377	A->G	+	ENSG00000267383	AC011447.3	antisense	three_prime_utr	.	.	Alu	0.416667
19	20199918	A->G	+	ENSG00000267383	AC011447.3	antisense	three_prime_utr	.	.	Alu	0.153846
19	20199935	A->G	+	ENSG00000267383	AC011447.3	antisense	three_prime_utr	.	.	Alu	0.181818
19	20544016	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.2
19	20544065	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	21120085	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	21120122	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	21120168	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	21120225	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21120263	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.125
19	21121057	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.125
19	21121081	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	21121198	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	21121213	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	21121238	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	21121332	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.08
19	21122530	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21122945	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21122968	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21123060	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	21185492	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.097561
19	21185522	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	21185671	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21190719	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.6
19	21190726	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	21190727	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	21190761	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21190762	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21190791	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	21190801	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	21190823	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21190863	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.615385
19	21191177	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21191183	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21191191	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	21192230	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.7
19	21192268	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	21194626	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21194641	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	21194649	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21291623	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21291668	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	21291782	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	21291818	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.833333
19	21292117	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	21292124	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21292139	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.3
19	21292228	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	21806279	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0540541
19	21806368	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	23221653	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	23221666	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.241379
19	23221677	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.178571
19	23221678	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	23221708	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.08
19	23221729	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.2
19	23221751	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.125
19	23221755	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	23221828	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	23221829	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	23359387	A->G	-	ENSG00000167232	ZNF91	protein_coding	three_prime_utr	.	.	Alu	0.030303
19	23923505	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	37246668	A->G	+	ENSG00000188283	ZNF383	protein_coding	three_prime_utr	.	.	Alu	0.4
19	37246669	A->G	+	ENSG00000188283	ZNF383	protein_coding	three_prime_utr	.	.	Alu	0.3
19	37246682	A->G	+	ENSG00000188283	ZNF383	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	38868177	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	39490600	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.2
19	39490610	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	39490868	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	39490871	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.615385
19	44662491	A->G	+	ENSG00000073008	PVR	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	44902261	A->G	+	ENSG00000130204	TOMM40	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	44902282	A->G	+	ENSG00000130204	TOMM40	protein_coding	three_prime_utr	.	.	Alu	0.25
19	44949465	A->G	+	ENSG00000224916	APOC4-APOC2	protein_coding	three_prime_utr	.	.	Alu	0.727273
19	45549546	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	45549937	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	45552336	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	52556182	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	52556196	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	52556375	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.291667
19	52556396	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	52556401	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	52556427	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	52563905	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.3
19	52584380	A->G	+	ENSG00000268886	AC022150.1	antisense	three_prime_utr	.	.	Alu	0.636364
19	53411531	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	53411553	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	54588495	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	54588499	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.727273
19	54588759	A->G	+	ENSG00000239998	LILRA2	protein_coding	three_prime_utr	.	.	Alu	0.5
19	57214430	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57845110	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57845156	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57845172	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57860381	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.391304
19	57860386	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	57860469	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.257143
19	57860489	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.135135
19	57860503	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	57860631	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57860673	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57860676	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	57860680	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.621622
19	57860701	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.527778
19	57860881	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	57860952	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	57860990	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	57860997	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1
19	57861352	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57861355	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	57861356	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.346154
19	57861379	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.368421
19	57861384	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.342105
19	57861394	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.139535
19	57861395	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	57861400	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	57861431	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0289855
19	57861443	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	57861448	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0882353
19	57861460	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0240964
19	57861468	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0238095
19	57861476	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	57861847	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.215385
19	57861853	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0727273
19	57861887	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	57861899	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57861909	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	57862008	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	57862009	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57862036	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	57862048	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	57862984	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	57863008	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	57863217	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	57863789	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.347826
19	57863790	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	57863833	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.08
19	57863842	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57863856	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1
19	57863885	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57863928	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57863932	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57863950	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	57863953	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.642857
19	57863978	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	57863992	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.315789
19	57864227	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57864234	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.25
19	57864260	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1
19	57864263	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.15
19	57864273	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57864295	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	57864299	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	57864339	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	57864368	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.421053
19	57864375	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.444444
19	57864392	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	57864406	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57907086	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	57907087	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.25
19	57907124	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	57907125	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.714286
19	57908328	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	57908390	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58296493	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	58296494	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	58296534	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58296540	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	58296556	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	58296647	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	58297036	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	58297054	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	58297055	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	58297084	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	58297089	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	58297110	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	58297135	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	58297179	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.4
19	58297183	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58297190	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	25447220	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	25447310	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
20	25447908	A->G	+	ENSG00000101003	GINS1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
20	32236438	A->G	+	ENSG00000101346	POFUT1	protein_coding	three_prime_utr	.	.	Alu	0.0229885
20	33705127	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	33705489	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.7
20	33706164	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	33706198	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.357143
20	33706199	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	33706975	A->G	-	ENSG00000101417	PXMP4	protein_coding	three_prime_utr	.	.	Alu	0.2
20	36781288	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	36781292	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	36781306	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.277778
20	36781310	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	36781319	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.304348
20	36781370	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.642857
20	36781373	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.692308
20	36781414	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.733333
20	36781423	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.529412
20	36781450	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.125
20	36781453	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	36781484	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.121951
20	36781534	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.121212
20	36781949	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.192308
20	36781953	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.08
20	36781959	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	36781966	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.4
20	36781976	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.176471
20	36781998	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.3
20	36782002	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.4
20	36782013	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	36782112	A->G	-	ENSG00000149639	SOGA1	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	45078286	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0681818
20	45079094	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.027027
20	45079117	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0222222
20	50118409	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	three_prime_utr	.	.	Alu	0.4
20	50119376	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	50119405	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	three_prime_utr	.	.	Alu	0.2
21	33263985	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.0606061
21	33264094	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.05
21	33355807	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.16129
21	33355829	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
21	33357663	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	33357665	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.307692
21	33357710	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	33357713	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	33357727	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.294118
21	33357789	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.235294
21	33357790	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.3125
21	33357802	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.291667
21	42909216	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
21	42909281	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.125
21	42909331	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.357143
21	42909342	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.222222
21	42909351	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.08
21	42909364	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.115385
21	42909376	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.133333
21	42909403	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0625
21	42909416	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
21	42909743	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.178571
21	42909744	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
21	42909759	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.1
21	42909760	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.5
21	42909779	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
21	42909780	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.147059
21	42909849	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.131579
21	42909867	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.097561
21	42909870	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.125
21	42909884	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.243902
21	42909887	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.340426
21	42909937	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.327273
21	42909947	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.04
21	42909948	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.134615
21	42910070	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	42910071	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.434783
21	42910141	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
21	42910143	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.913043
21	42910149	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	42910191	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.6
21	42910204	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
21	42910205	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.217391
21	42910222	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
21	42910231	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	42910237	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.411765
21	42910240	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.3
21	42910245	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	42910246	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.111111
21	42910253	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.15
21	42910274	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.173913
21	42910988	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.3
21	42911005	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.2
21	42911096	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.363636
21	42911149	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.428571
21	42911154	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	42911607	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.533333
21	42911608	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.375
21	42911665	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.157895
21	42912042	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	42912051	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.142857
21	42912065	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.153846
21	42912076	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.153846
21	42912093	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	42912119	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	17110248	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.025
22	17110419	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.028169
22	17110680	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0285714
22	17113215	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.294118
22	17113216	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0722892
22	17113247	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.404762
22	17113258	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	17113261	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.194805
22	17113268	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.207317
22	17113273	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0729167
22	17113311	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0266667
22	17113373	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0408163
22	17113380	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.487805
22	17113382	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.05
22	17113383	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	17113436	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0210526
22	17113471	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0206186
22	18088620	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.030303
22	18091588	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	18095867	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	18095909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	18095916	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	18095923	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.3125
22	18095952	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.294118
22	18096096	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.125
22	18097082	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	18097537	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	18097803	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.125
22	18939747	A->G	+	ENSG00000283809	AC007326.4	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	23739553	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	23739558	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.416667
22	23739559	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	23741986	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	23742005	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	23742006	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	23742084	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.125
22	23742090	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	23742126	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	23742136	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	23742165	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	23742214	A->G	-	ENSG00000187792	ZNF70	protein_coding	three_prime_utr	.	.	Alu	0.1875
22	25724914	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.363636
22	25724940	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.3125
22	25724961	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	25724965	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	25724973	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.470588
22	25724978	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	25724994	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.866667
22	25725026	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.210526
22	25725027	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	25725031	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	25725099	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
22	25725118	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.0882353
22	25725119	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	25725802	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.384615
22	26525382	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	29506422	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.222222
22	29506443	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.1875
22	29506454	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.307692
22	29506455	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.384615
22	29506456	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	29506524	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.2
22	29506525	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.8
22	29506538	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.307692
22	29506551	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.2
22	29506561	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.75
22	29506565	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	29506590	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.375
22	29506618	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.2
22	29506623	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	29506961	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	29506993	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.545455
22	29507007	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.636364
22	29507039	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	29507044	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	29507045	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	29507046	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	29507090	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	29507126	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.538462
22	29507430	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	29507435	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.538462
22	30662635	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	30662644	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	30662647	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	30662772	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	30662798	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.384615
22	35659793	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.564103
22	35659860	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	35659866	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.290323
22	35659869	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.46875
22	35659891	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.173913
22	35659932	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0606061
22	35659940	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0394737
22	35659956	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0263158
22	35660345	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0892857
22	35660362	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0746269
22	35660363	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.164179
22	35660444	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.612903
22	35660445	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.566667
22	35660446	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.15
22	35660551	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.708333
22	35660685	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	35661205	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.04
22	35661279	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.125
22	35661283	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	37775528	A->G	+	ENSG00000100106	TRIOBP	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	39018725	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.020202
22	39032998	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.0645161
22	39033064	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.1
22	39053026	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	39053087	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.565217
22	39053116	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.75
22	39053205	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	39053230	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.347826
22	39053256	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	39053257	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	39053258	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.24
22	39053499	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	39053535	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.1
22	39053543	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.2
22	39053570	A->G	+	ENSG00000128394	APOBEC3F	protein_coding	three_prime_utr	.	.	Alu	0.173913
22	40927272	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	40929402	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	40930403	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	40930669	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	40930696	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	40930699	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.692308
22	40930709	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	40930711	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	40930740	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	40930746	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	40930821	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.5
22	40931587	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.4
22	40931591	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	40931593	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	40931603	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.3
22	40931607	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.538462
22	40931639	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.25
22	40931647	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	40931688	A->G	+	ENSG00000196236	XPNPEP3	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	41599256	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.222222
22	44170262	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	45194408	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.310345
1	100024395	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	100024503	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	109594844	A->G	+	ENSG00000065135	GNAI3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	109596415	A->G	+	ENSG00000225113	AL355310.1	sense_overlapping	three_prime_utr	.	.	Alu	0.25
1	117105723	A->G	+	ENSG00000116830	TTF2	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	145745653	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.3
1	145923125	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	145925450	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.0375
1	145925523	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	145925524	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	149555674	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.6
1	150647231	A->G	-	ENSG00000143457	GOLPH3L	protein_coding	three_prime_utr	.	.	Alu	0.0408163
1	150732075	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.025974
1	150996150	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	150996182	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	150996185	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	150996206	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	150996745	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	150996781	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	150996810	A->G	-	ENSG00000143409	MINDY1	protein_coding	three_prime_utr	.	.	Alu	0.25
1	151118851	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.727273
1	151118856	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	151119185	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	151119201	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.3125
1	151119249	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	151119353	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	151119354	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	151119360	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	151119418	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	151119554	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	151123400	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151123589	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151123986	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151124241	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151124262	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	151124291	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	151124315	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	151124329	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	151124349	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	151124351	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	151124358	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151874490	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	155881854	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0322581
1	155881938	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	155882003	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.08
1	160026906	A->G	-	ENSG00000143315	PIGM	protein_coding	three_prime_utr	.	.	Alu	1
1	160026914	A->G	-	ENSG00000143315	PIGM	protein_coding	three_prime_utr	.	.	Alu	0.2
1	160995509	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	160995614	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	160996683	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0357143
1	160996942	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0727273
1	160998053	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	161366977	A->G	+	ENSG00000188931	CFAP126	protein_coding	three_prime_utr	.	.	Alu	0.25
1	161366995	A->G	+	ENSG00000188931	CFAP126	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	161367027	A->G	+	ENSG00000188931	CFAP126	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	168244258	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0206186
1	168244277	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0285714
1	168244278	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0280374
1	168244282	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.030303
1	168244368	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	168244376	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	168251040	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	168251089	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	168251102	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	168251236	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0405405
1	173891670	A->G	+	ENSG00000185278	ZBTB37	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	173895216	A->G	+	ENSG00000185278	ZBTB37	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179073340	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.0294118
1	179073347	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.206349
1	179073377	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	179073409	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179073415	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179073416	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.318182
1	179073433	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	179073488	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179073552	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.04
1	179073678	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.0724638
1	179073770	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.0659341
1	179356728	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.1
1	179356751	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179356822	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	179357303	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.08
1	179357320	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	179357332	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	179357712	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179859893	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	179860360	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179860374	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	179860449	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	179860460	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	three_prime_utr	.	.	Alu	0.3
1	201877291	A->G	+	ENSG00000198700	IPO9	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	204552584	A->G	+	ENSG00000198625	MDM4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	204552596	A->G	+	ENSG00000198625	MDM4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	214349313	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.179487
1	214349315	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0810811
1	214349358	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.170732
1	214350762	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.8
1	214350763	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.6
1	214350777	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.181818
1	214350786	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.181818
1	214350975	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.125
1	214351091	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.25
1	214351103	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0434783
1	214351142	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.15
1	214351153	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.15625
1	214351179	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.4
1	214351190	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0909091
1	214351213	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.25
1	214351223	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.117647
1	214351233	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.133333
1	214355764	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0909091
1	214355794	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.32
1	214355823	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0851064
1	214355827	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.38
1	214355891	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.7
1	214355904	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.173913
1	214355910	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.294118
1	214356348	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0689655
1	214356378	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0555556
1	214356382	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.740741
1	214356397	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.613636
1	214356399	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.166667
1	214356403	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.0769231
1	214356431	A->G	-	ENSG00000228470	AL929236.1	sense_overlapping	three_prime_utr	.	.	Alu	0.342857
1	220814472	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	220814473	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.2
1	220814546	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	220814547	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	220814624	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	220814704	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	220817198	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	220817199	A->G	+	ENSG00000186205	1-Mar	protein_coding	three_prime_utr	.	.	Alu	0.2
1	222669496	A->G	-	ENSG00000186063	AIDA	protein_coding	three_prime_utr	.	.	Alu	0.75
1	236602848	A->G	-	ENSG00000119285	HEATR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	245122138	A->G	+	ENSG00000203666	EFCAB2	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	245122737	A->G	+	ENSG00000203666	EFCAB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	112531049	A->G	+	ENSG00000114999	TTL	protein_coding	three_prime_utr	.	.	Alu	0.1
2	118109420	A->G	+	ENSG00000125629	INSIG2	protein_coding	three_prime_utr	.	.	Alu	0.25
2	127844765	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	127844881	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	127844927	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	127845552	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.08
2	127846145	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.12
2	127846242	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	127846258	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.2
2	127847623	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	128191655	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0212766
2	128193273	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	130159555	A->G	-	ENSG00000136699	SMPD4	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	130159569	A->G	-	ENSG00000136699	SMPD4	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	130159594	A->G	-	ENSG00000136699	SMPD4	protein_coding	three_prime_utr	.	.	Alu	0.4
2	151477765	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	151477779	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	151477809	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	151477835	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	151477875	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	151477907	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	151478308	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	151478309	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	171322478	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	171322480	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	171322492	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	171322493	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	171322687	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	171322692	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.3
2	171323394	A->G	-	ENSG00000123600	METTL8	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	175924750	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.541667
2	175924895	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	175926453	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.375
2	175926454	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.5
2	175926455	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.233333
2	200978650	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.105263
2	200978655	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.105263
2	200978656	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.444444
2	200978670	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.266667
2	201164032	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.135135
2	201164033	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	201164087	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0512821
2	201165410	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	201165445	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	201165451	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	201165534	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	201165546	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.1
2	201167242	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0625
2	201167352	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.027027
2	201167408	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0263158
2	201219041	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	201287275	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	201287277	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0465116
2	202875660	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	202875661	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	202876197	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	202876701	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	202876900	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	202877403	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.384615
2	202877404	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	202877405	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	202877601	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	202877617	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.526316
2	202877625	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.588235
2	202877647	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	202877650	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	202879213	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.125
2	202879510	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.1
2	202879639	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	202880356	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	202880365	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.0697674
2	202880447	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.5
2	202880448	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.4
2	202880472	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.590909
2	202880495	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	202880496	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	202880501	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	203297408	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	203297544	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	203297586	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	203297870	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	203297935	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	203298001	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	203305460	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	206116629	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0909091
2	206116857	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.181818
2	206116898	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.25
2	206116904	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.833333
2	206116922	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.166667
2	206116937	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.142857
2	206116967	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.3125
2	206116972	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.2
2	206116973	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.4
2	206116975	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.470588
2	206116981	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.375
2	206117005	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.5
2	206117017	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.133333
2	206117035	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.25
2	206117070	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0769231
2	206117072	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0740741
2	206117082	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0769231
2	206117094	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.166667
2	206117531	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.266667
2	206117532	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.166667
2	206117533	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.785714
2	206117599	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.133333
2	206117602	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.105263
2	206117612	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.105263
2	206117614	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.222222
2	206117617	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.352941
2	206117623	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.166667
2	206117628	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.111111
2	206117634	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.625
2	206117668	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.142857
2	206118391	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.25
2	206118438	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0909091
2	206118453	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.153846
2	206118477	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0740741
2	206118478	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0769231
2	206118486	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.25
2	206118708	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.214286
2	206118767	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.222222
2	206118779	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.166667
2	206118852	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.142857
2	206118853	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0666667
2	206118964	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0833333
2	206118988	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.285714
2	206119025	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0769231
2	206119026	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0512821
2	206119036	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.259259
2	206119041	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.148148
2	206119042	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.111111
2	206119073	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.111111
2	206119507	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.230769
2	206119508	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.5
2	206119551	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.133333
2	206119552	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.125
2	206119570	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.125
2	206119574	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.375
2	206119578	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.25
2	206119595	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.125
2	206121511	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0857143
2	206121564	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.133333
2	206121585	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0740741
2	206121613	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.214286
2	206121617	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.285714
2	206121626	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.142857
2	206121629	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.142857
2	206121630	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.214286
2	206121632	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.214286
2	206122174	A->G	-	ENSG00000231955	AC007383.3	antisense	three_prime_utr	.	.	Alu	0.0555556
2	206122403	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	206122517	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	206122542	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.031746
2	206122595	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
2	206122616	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.75
2	207754527	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	207754591	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	207754592	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	207754596	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	207754638	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	207754742	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	207754807	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.28125
2	207755010	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	207755276	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	216503494	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	216503495	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	223757354	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	223757427	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	223757561	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	223757567	A->G	-	ENSG00000152056	AP1S3	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	101766954	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101766955	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101768574	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.125
3	101768634	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.2
3	101768654	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	101824609	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0952381
3	101824627	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.105263
3	141945212	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	141945267	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141946980	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	141947517	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.583333
3	141947520	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.25
3	141948362	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	141948398	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	141948443	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.16
3	141948460	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.354839
3	141948461	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.354839
3	141948496	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141948497	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.241379
3	141950880	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	142162046	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.3
3	142162830	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	1
3	142162833	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.3
3	142163778	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	142163779	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	142163830	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.714286
3	155941216	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	155941345	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	155942057	A->G	+	ENSG00000163655	GMPS	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	160435223	A->G	+	ENSG00000213186	TRIM59	protein_coding	three_prime_utr	.	.	Alu	0.2
3	160435304	A->G	+	ENSG00000213186	TRIM59	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	160435314	A->G	+	ENSG00000213186	TRIM59	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	160435383	A->G	+	ENSG00000213186	TRIM59	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	170089091	A->G	-	ENSG00000268220	AC008040.5	antisense	three_prime_utr	.	.	Alu	0.0740741
3	170092242	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	172505926	A->G	-	ENSG00000121858	TNFSF10	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	172505967	A->G	-	ENSG00000121858	TNFSF10	protein_coding	three_prime_utr	.	.	Alu	0.0444444
3	179337206	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	179337224	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	179337392	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.9
3	179337401	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	179337441	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	179337503	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	179337520	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	179337559	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.380952
3	179337605	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.6875
3	179397623	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.0909091
3	179397906	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.185185
3	179397934	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.111111
3	179398393	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.285714
3	179398428	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.611111
3	179398497	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.666667
3	179398501	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.142857
3	179398517	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.285714
3	188879039	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	196735128	A->G	+	ENSG00000163964	PIGX	protein_coding	three_prime_utr	.	.	Alu	0.08
3	197787252	A->G	+	ENSG00000122068	FYTTD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	197884320	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	197884815	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	197885347	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	105846911	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.217391
4	105846920	A->G	+	ENSG00000138785	INTS12	protein_coding	three_prime_utr	.	.	Alu	0.16
4	108625439	A->G	+	ENSG00000109475	RPL34	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	108625442	A->G	+	ENSG00000109475	RPL34	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	109689097	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.047619
4	120058032	A->G	-	ENSG00000164109	MAD2L1	protein_coding	three_prime_utr	.	.	Alu	0.125
4	120058036	A->G	-	ENSG00000164109	MAD2L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	120058037	A->G	-	ENSG00000164109	MAD2L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	120058038	A->G	-	ENSG00000164109	MAD2L1	protein_coding	three_prime_utr	.	.	Alu	0.4
4	120058458	A->G	-	ENSG00000164109	MAD2L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	120058464	A->G	-	ENSG00000164109	MAD2L1	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	120058475	A->G	-	ENSG00000164109	MAD2L1	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	120058490	A->G	-	ENSG00000164109	MAD2L1	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	123314817	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	123314885	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.210526
4	123315829	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.238095
4	123315912	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	123315920	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	123316032	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	128036516	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.3125
4	128036529	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.3
4	128036530	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.2
4	128036549	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.25
4	128036569	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	128036609	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.25
4	128037518	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.25
4	128037521	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.444444
4	128037528	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.285714
4	128037548	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.541667
4	128037579	A->G	+	ENSG00000164074	ABHD18	protein_coding	three_prime_utr	.	.	Alu	0.103448
4	139045698	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0423729
4	140550905	A->G	+	ENSG00000179387	ELMOD2	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	152622904	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	152622919	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	152623024	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	152623029	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.7
4	152623054	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.25
4	152624428	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	152625597	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	165075373	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	165075667	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	165075919	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	165075988	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.1
4	165076020	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.222222
4	165076867	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	165077540	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	165077810	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	176331087	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0763889
5	115205840	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.4
5	115205841	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.5
5	115206621	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.2
5	115206632	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.384615
5	115206757	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.6
5	118839038	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.631579
5	118839040	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.722222
5	118839062	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.388889
5	118839565	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.2
5	118839575	A->G	-	ENSG00000169570	DTWD2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	119394707	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	119394733	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	119394746	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	119394781	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	119394804	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.0526316
5	119394816	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.236364
5	119394842	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.030303
5	119394868	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.0327869
5	119394869	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	119396807	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	119396831	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.375
5	119396832	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.375
5	119396833	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.3125
5	119396834	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	119396837	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	122027184	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
5	122027219	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
5	122027225	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
5	122028396	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	122028527	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.3
5	126625884	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0555556
5	126625934	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0512821
5	131201846	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
5	131202350	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0576923
5	131202418	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0408163
5	131203438	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0882353
5	131203508	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	131204123	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.457143
5	132694168	A->G	-	ENSG00000230612	AC004039.1	antisense	three_prime_utr	.	.	Alu	0.125
5	132694275	A->G	-	ENSG00000230612	AC004039.1	antisense	three_prime_utr	.	.	Alu	0.0833333
5	132694283	A->G	-	ENSG00000230612	AC004039.1	antisense	three_prime_utr	.	.	Alu	0.115385
5	134153475	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.125
5	134153476	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	134829773	A->G	+	ENSG00000145833	DDX46	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	134900516	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	134900604	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.0350877
5	134900628	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.0363636
5	143225353	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.454545
5	143225363	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	143225441	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.294118
5	149981852	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.107143
5	149981910	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.075
5	149983677	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
5	149984382	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.206897
5	149984504	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
5	149984530	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
5	149984581	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	149984582	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
5	151268178	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
5	151268256	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0538462
5	151268259	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.023622
5	151268282	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0357143
5	151268285	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
5	151806824	A->G	+	ENSG00000145907	G3BP1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
5	154054883	A->G	+	ENSG00000037749	MFAP3	protein_coding	three_prime_utr	.	.	Alu	0.538462
5	157758208	A->G	+	ENSG00000155858	LSM11	protein_coding	three_prime_utr	.	.	Alu	0.3
5	175529178	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.173913
6	106970278	A->G	-	ENSG00000272398	CD24	protein_coding	three_prime_utr	.	.	Alu	0.388889
6	108042172	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	108042214	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	108042239	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.4375
6	108042249	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.833333
6	108042260	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	108042264	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.2
6	108042685	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	109464684	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	111026979	A->G	+	ENSG00000197498	RPF2	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	111267700	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.545455
6	111267727	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.2
6	111267742	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	111267749	A->G	+	ENSG00000173214	MFSD4B	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	118813772	A->G	-	ENSG00000111877	MCM9	protein_coding	three_prime_utr	.	.	Alu	1
6	149724898	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.12
6	149725600	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.909091
6	149725605	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.25
6	149726214	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.0408163
6	158974979	A->G	-	ENSG00000130363	RSPH3	protein_coding	three_prime_utr	.	.	Alu	0.25
6	158975926	A->G	-	ENSG00000130363	RSPH3	protein_coding	three_prime_utr	.	.	Alu	0.25
6	158975932	A->G	-	ENSG00000130363	RSPH3	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	102448532	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	102448814	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
7	102565251	A->G	-	ENSG00000168255	POLR2J3	protein_coding	three_prime_utr	.	.	Alu	0.25
7	102565252	A->G	-	ENSG00000168255	POLR2J3	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	102566004	A->G	-	ENSG00000168255	POLR2J3	protein_coding	three_prime_utr	.	.	Alu	0.1
7	102637153	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
7	102637154	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.116279
7	102637155	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
7	103335976	A->G	-	ENSG00000105821	DNAJC2	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128305542	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	128305550	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	128305598	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.222222
7	128307852	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.227273
7	128308735	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	128308795	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.461538
7	128309376	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.129032
7	128309388	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.217391
7	128309389	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.130435
7	128309416	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	128502722	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.1
7	128502747	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.1
7	128503552	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0740741
7	128503883	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	134064695	A->G	+	ENSG00000131558	EXOC4	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	135676088	A->G	+	ENSG00000243317	STMP1	protein_coding	three_prime_utr	.	.	Alu	0.05
7	135676097	A->G	+	ENSG00000243317	STMP1	protein_coding	three_prime_utr	.	.	Alu	0.05
7	135676134	A->G	+	ENSG00000243317	STMP1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
7	140472204	A->G	-	ENSG00000133606	MKRN1	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	140731051	A->G	-	ENSG00000157764	BRAF	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	140731079	A->G	-	ENSG00000157764	BRAF	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	152646598	A->G	-	ENSG00000196584	XRCC2	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	152646615	A->G	-	ENSG00000196584	XRCC2	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	152646641	A->G	-	ENSG00000196584	XRCC2	protein_coding	three_prime_utr	.	.	Alu	0.4
7	156970122	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.235294
7	156970432	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	156970509	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.16129
7	156970545	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	156970572	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.238095
7	156970638	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.222222
7	156970643	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	156970678	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.2
7	156971457	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	156971504	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	156972629	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	156972750	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	143655437	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.0769231
8	143655493	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	143655580	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	143655812	A->G	+	ENSG00000183309	ZNF623	protein_coding	three_prime_utr	.	.	Alu	0.2
8	144293571	A->G	+	ENSG00000185122	HSF1	protein_coding	three_prime_utr	.	.	Alu	0.2
9	112684291	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0967742
9	112685257	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	112686665	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0789474
9	125235422	A->G	-	ENSG00000044574	HSPA5	protein_coding	three_prime_utr	.	.	Alu	0.0526316
9	128306545	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128306906	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
9	128306929	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.157895
9	128306935	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.894737
9	128306939	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.235294
9	128306954	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.25
9	128306955	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.25
9	128307054	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
9	128307213	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.3
9	128307548	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.1
9	128307565	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.190476
9	128307568	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.190476
9	128307582	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	128308067	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.1875
9	128308154	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.25
9	128308186	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.1
9	128308208	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.176471
9	128308344	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	128308412	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	128308483	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.545455
9	128309283	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
9	129827915	A->G	-	ENSG00000136819	C9orf78	protein_coding	three_prime_utr	.	.	Alu	0.025974
10	102738125	A->G	+	ENSG00000156398	SFXN2	protein_coding	three_prime_utr	.	.	Alu	0.137931
10	102738126	A->G	+	ENSG00000156398	SFXN2	protein_coding	three_prime_utr	.	.	Alu	0.206897
10	104125895	A->G	+	ENSG00000156384	SFR1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	117281346	A->G	-	ENSG00000165650	PDZD8	protein_coding	three_prime_utr	.	.	Alu	1
10	119572277	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.125
10	119572445	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
10	119572457	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	119572512	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	119572722	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.692308
10	119572723	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.583333
10	119572816	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.125
10	119573096	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.571429
10	119573099	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.3125
10	119573111	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.217391
10	119573121	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.192308
10	119573162	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.151515
10	119573171	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	119573174	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
10	119573189	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.485714
10	119573192	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.205128
10	119573208	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.175
10	119573248	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
10	119573281	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.204545
10	119573300	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	119573325	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	131912596	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	three_prime_utr	.	.	Alu	1
11	108365870	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	108365980	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	108367163	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.2
11	118750989	A->G	-	ENSG00000110367	DDX6	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	119001801	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.294118
11	119001824	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	108785188	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0377358
12	108785196	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	108785217	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
12	108785258	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	108785272	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.05
12	108786643	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.136364
12	110491112	A->G	-	ENSG00000111237	VPS29	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	110491142	A->G	-	ENSG00000111237	VPS29	protein_coding	three_prime_utr	.	.	Alu	0.692308
12	110491145	A->G	-	ENSG00000111237	VPS29	protein_coding	three_prime_utr	.	.	Alu	0.538462
12	110491152	A->G	-	ENSG00000111237	VPS29	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	110491156	A->G	-	ENSG00000111237	VPS29	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	110491163	A->G	-	ENSG00000111237	VPS29	protein_coding	three_prime_utr	.	.	Alu	0.2
12	111895733	A->G	+	ENSG00000089022	MAPKAPK5	protein_coding	three_prime_utr	.	.	Alu	0.2
12	111895751	A->G	+	ENSG00000089022	MAPKAPK5	protein_coding	three_prime_utr	.	.	Alu	0.125
12	111895776	A->G	+	ENSG00000089022	MAPKAPK5	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	113391119	A->G	+	ENSG00000151176	PLBD2	protein_coding	three_prime_utr	.	.	Alu	0.12
12	113391120	A->G	+	ENSG00000151176	PLBD2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	113391155	A->G	+	ENSG00000151176	PLBD2	protein_coding	three_prime_utr	.	.	Alu	0.266667
12	113391156	A->G	+	ENSG00000151176	PLBD2	protein_coding	three_prime_utr	.	.	Alu	0.3125
12	116714663	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0408163
12	116715165	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0363636
12	120460916	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.08
12	120460917	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	120460925	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	120460926	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	120461275	A->G	-	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.15
12	121777056	A->G	+	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.3
12	121778388	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	123411207	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	123411392	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.3
12	123412342	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	123413120	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.5
12	123662014	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0652174
12	125026793	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0222222
12	125026800	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0217391
12	125026802	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.032967
12	125026810	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.025
12	125026832	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0327869
12	125027431	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	125027518	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	125027633	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	125027762	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	125027768	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0512821
12	125027813	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	125027853	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	125027854	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	125027947	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.185714
12	125027988	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	125027994	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	132769976	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0425532
14	103590733	A->G	+	ENSG00000256053	APOPT1	protein_coding	three_prime_utr	.	.	Alu	0.08
15	101071470	A->G	+	ENSG00000154237	LRRK1	protein_coding	three_prime_utr	.	.	Alu	0.0952381