Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	effect	AA_change	Repeat	AD12_rel
MT	4917	A->G	+	ENSG00000198763	MT-ND2	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	1
MT	11251	A->G	+	ENSG00000198886	MT-ND4	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	1
MT	11812	A->G	+	ENSG00000198886	MT-ND4	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	1
MT	15326	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	1
MT	15607	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	synonymous_variant	p.Lys->Lys	Alu	1
4	59457	A->G	+	ENSG00000272602	ZNF595	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.92
X	315276	A->G	-	ENSG00000178605	GTPBP6	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.410256
11	651383	A->G	-	ENSG00000177030	DEAF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.3
16	2097936	A->G	-	ENSG00000008710	PKD1	protein_coding	exon	missense_variant	p.Ile->Val	Alu	0.8
X	2221159	A->G	-	ENSG00000169084	DHRSX	protein_coding	CDS	missense_variant	p.His->Arg	Alu	1
4	2938295	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.His->Arg	Alu	0.0740741
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.592593
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.222222
17	5418081	A->G	-	ENSG00000108559	NUP88	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.0625
7	6111820	A->G	+	ENSG00000106346	USP42	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
19	6784238	A->G	+	ENSG00000141968	VAV1	protein_coding	CDS	synonymous_variant	p.Lys->Lys	Alu	0.2
12	6856030	A->G	+	ENSG00000111667	USP5	protein_coding	CDS	synonymous_variant	p.Gly->Gly	Alu	0.368421
19	8492024	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	upstream_gene_variant	.	Alu	0.615385
6	12037770	A->G	+	ENSG00000095951	HIVEP1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.368421
Y	13323334	A->G	-	ENSG00000183878	UTY	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0909091
11	17076518	A->G	-	ENSG00000110700	RPS13	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.333333
20	17659159	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0983607
20	17659189	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.11828
20	17659219	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.110345
19	18071296	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.1875
19	18071320	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.142857
19	18071325	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.133333
16	18786282	A->G	-	ENSG00000134419	RPS15A	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0714286
16	18786283	A->G	-	ENSG00000134419	RPS15A	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.0740741
16	18786302	A->G	-	ENSG00000134419	RPS15A	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.1
16	18868647	A->G	-	ENSG00000157106	SMG1	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.941176
16	18896930	A->G	-	ENSG00000157106	SMG1	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.403846
1	19600811	A->G	+	ENSG00000173436	MINOS1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
1	19600869	A->G	+	ENSG00000173436	MINOS1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.166667
19	19791686	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	non_coding_transcript_exon_variant	.	Alu	0.111111
19	19792412	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.181818
19	19792444	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	exon	non_coding_transcript_exon_variant	.	Alu	0.333333
19	21098817	A->G	+	ENSG00000160352	ZNF714	protein_coding	CDS	missense_variant&splice_region_variant	p.Ile->Val	Alu	0.235294
22	22099077	A->G	+	ENSG00000211638	IGLV8-61	IG_V_gene	CDS	missense_variant	p.Asn->Ser	Alu	0.178571
22	22099132	A->G	+	ENSG00000211638	IGLV8-61	IG_V_gene	CDS	synonymous_variant	p.Lys->Lys	Alu	0.111111
22	22214977	A->G	+	ENSG00000211642	IGLV10-54	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.104089
22	22215209	A->G	+	ENSG00000211642	IGLV10-54	IG_V_gene	CDS	synonymous_variant	p.Gly->Gly	Alu	0.0560748
22	22358048	A->G	+	ENSG00000211648	IGLV1-47	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.125
22	22369842	A->G	+	ENSG00000211649	IGLV7-46	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.132075
22	22369925	A->G	+	ENSG00000211649	IGLV7-46	IG_V_gene	CDS	synonymous_variant	p.Gln->Gln	Alu	0.152941
22	22369950	A->G	+	ENSG00000211649	IGLV7-46	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.0535714
22	22369953	A->G	+	ENSG00000211649	IGLV7-46	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.0555556
22	22369960	A->G	+	ENSG00000211649	IGLV7-46	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.122449
22	22369963	A->G	+	ENSG00000211649	IGLV7-46	IG_V_gene	CDS	missense_variant	p.His->Arg	Alu	0.111111
22	22381142	A->G	+	ENSG00000211651	IGLV1-44	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.179487
22	22381155	A->G	+	ENSG00000211651	IGLV1-44	IG_V_gene	CDS	missense_variant	p.Asn->Ser	Alu	0.0833333
22	22686987	A->G	+	ENSG00000211659	IGLV3-25	IG_V_gene	CDS	missense_variant	p.Glu->Gly	Alu	0.0612245
22	22687080	A->G	+	ENSG00000211659	IGLV3-25	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.0833333
22	22698308	A->G	+	ENSG00000211660	IGLV2-23	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.0545455
22	22713143	A->G	+	ENSG00000211662	IGLV3-21	IG_V_gene	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0769231
22	22720962	A->G	+	ENSG00000211663	IGLV3-19	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.123711
22	22720975	A->G	+	ENSG00000211663	IGLV3-19	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.0978261
22	22721058	A->G	+	ENSG00000211663	IGLV3-19	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.0864198
22	22792917	A->G	+	ENSG00000211668	IGLV2-11	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.189873
22	22881336	A->G	+	ENSG00000211673	IGLV3-1	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.208333
22	22922782	A->G	+	ENSG00000211685	IGLC7	IG_C_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.272727
19	23359424	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.0212766
19	23359502	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.0212766
19	24091949	A->G	+	ENSG00000213096	ZNF254	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0714286
19	24091954	A->G	+	ENSG00000213096	ZNF254	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0714286
19	24091960	A->G	+	ENSG00000213096	ZNF254	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0714286
18	26081232	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.15
18	26081255	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0869565
18	26081302	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0689655
18	26081328	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.148148
12	27030182	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.125
12	27030183	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.146341
12	27030188	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0952381
12	27654771	A->G	+	ENSG00000110841	PPFIBP1	protein_coding	CDS	missense_variant	p.Asp->Gly	Alu	0.3
12	27654803	A->G	+	ENSG00000110841	PPFIBP1	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.263158
15	28146325	A->G	-	ENSG00000128731	HERC2	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.333333
6	31271074	A->G	-	ENSG00000204525	HLA-C	protein_coding	exon	splice_region_variant&synonymous_variant	p.Ala->Ala	Alu	1
1	32673502	A->G	+	ENSG00000162521	RBBP4	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.142857
1	32673542	A->G	+	ENSG00000162521	RBBP4	protein_coding	CDS	synonymous_variant	p.Arg->Arg	Alu	0.0869565
1	32673567	A->G	+	ENSG00000162521	RBBP4	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0869565
1	32673577	A->G	+	ENSG00000162521	RBBP4	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.190476
21	33551013	A->G	+	ENSG00000159140	SON	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.114583
20	35713770	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0505051
20	35713827	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0277778
19	36117866	A->G	+	ENSG00000105254	TBCB	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.2
5	38949393	A->G	-	ENSG00000164327	RICTOR	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0869565
7	39950745	A->G	+	ENSG00000065883	CDK13	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.266667
13	40951694	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.153846
13	40951700	A->G	-	ENSG00000120690	ELF1	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.307692
19	41362994	A->G	-	ENSG00000123810	B9D2	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.214286
17	43186278	A->G	+	ENSG00000188554	NBR1	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0545455
7	44468305	A->G	+	ENSG00000015676	NUDCD3	protein_coding	Intergenic	downstream_gene_variant	.	Alu	1
13	45516231	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0517241
13	45516235	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0754717
13	45516236	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.574074
22	46292235	A->G	+	ENSG00000075234	TTC38	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
X	47241326	A->G	+	ENSG00000102226	USP11	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.0588235
17	47579460	A->G	+	ENSG00000141279	NPEPPS	protein_coding	exon	synonymous_variant	p.Lys->Lys	Alu	0.285714
3	49008943	A->G	+	ENSG00000178252	WDR6	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.692308
3	49008982	A->G	+	ENSG00000178252	WDR6	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.230769
3	49011454	A->G	+	ENSG00000178252	WDR6	protein_coding	exon	missense_variant	p.Tyr->Cys	Alu	0.103448
3	49360949	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.344828
3	49360951	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.25
3	49360961	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.115385
3	49360990	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.147059
3	49360997	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0909091
10	49932105	A->G	-	ENSG00000227345	PARG	protein_coding	exon	missense_variant	p.Ile->Val	Alu	0.285714
10	49935104	A->G	-	ENSG00000227345	PARG	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.190476
10	49942262	A->G	+	ENSG00000204152	TIMM23B	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.117647
17	50723837	A->G	+	ENSG00000278963	AC005921.3	TEC	CDS	missense_variant	p.Ile->Val	Alu	0.142857
17	50723844	A->G	+	ENSG00000278963	AC005921.3	TEC	CDS	missense_variant	p.Gln->Arg	Alu	0.0571429
17	50723887	A->G	+	ENSG00000278963	AC005921.3	TEC	CDS	synonymous_variant	p.Ser->Ser	Alu	0.45
1	51356735	A->G	-	ENSG00000085832	EPS15	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.492308
12	53296435	A->G	+	ENSG00000123349	PFDN5	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.5
7	56078974	A->G	+	ENSG00000129103	SUMF2	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.153846
7	56078976	A->G	+	ENSG00000129103	SUMF2	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.153846
4	57110068	A->G	-	ENSG00000163453	IGFBP7	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.15873
19	57778775	A->G	+	ENSG00000083828	ZNF586	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.0517241
19	57844283	A->G	+	ENSG00000268750	AC010522.1	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.2
11	61438300	A->G	+	ENSG00000167985	SDHAF2	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.2
15	63530518	A->G	+	ENSG00000140455	USP3	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.166667
17	64350416	A->G	-	ENSG00000261371	PECAM1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	1
17	64520573	A->G	+	ENSG00000258890	CEP95	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.230769
17	64520575	A->G	+	ENSG00000258890	CEP95	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.153846
17	64520576	A->G	+	ENSG00000258890	CEP95	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.666667
17	64859478	A->G	-	ENSG00000176809	LRRC37A3	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.357143
5	65579575	A->G	+	ENSG00000113593	PPWD1	protein_coding	exon	missense_variant	p.Ile->Val	Alu	0.25
7	66773765	A->G	+	ENSG00000284461	AC027644.4	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.2
17	68256848	A->G	+	ENSG00000196704	AMZ2	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.6
10	72715198	A->G	+	ENSG00000156026	MCU	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.142857
14	73491067	A->G	+	ENSG00000170468	RIOX1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	1
16	74299629	A->G	+	ENSG00000103035	PSMD7	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0869565
4	77058527	A->G	-	ENSG00000118816	CCNI	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.13913
16	85672204	A->G	+	ENSG00000131149	GSE1	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.166667
6	88904727	A->G	-	ENSG00000111880	RNGTT	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.52381
1	89020153	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
1	89020182	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.153846
1	89020203	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.545455
2	89027307	A->G	-	ENSG00000241351	IGKV3-11	IG_V_gene	CDS	missense_variant	p.Asp->Gly	Alu	0.125
16	89889228	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	splice_region_variant&synonymous_variant	p.Arg->Arg	Alu	0.0606061
16	89889232	A->G	+	ENSG00000141002	TCF25	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.1875
2	90100538	A->G	+	ENSG00000241244	IGKV1D-16	IG_V_gene	CDS	missense_variant	p.Ile->Val	Alu	0.172414
1	93158861	A->G	-	ENSG00000117500	TMED5	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0740741
12	95482133	A->G	+	ENSG00000111142	METAP2	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.166667
12	95482149	A->G	+	ENSG00000111142	METAP2	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.142857
2	95899172	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Lys->Glu	Alu	0.191489
2	95899186	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.146667
2	95899211	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.292135
2	95904827	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.233766
2	95912299	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	synonymous_variant	p.Lys->Lys	Alu	0.05
2	96628593	A->G	-	ENSG00000114982	KANSL3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.153846
2	96628594	A->G	-	ENSG00000114982	KANSL3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.307692
2	96628604	A->G	-	ENSG00000114982	KANSL3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.615385
2	97208001	A->G	+	ENSG00000135976	ANKRD36	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.190476
4	98886511	A->G	-	ENSG00000151247	EIF4E	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.222222
7	99493532	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	synonymous_variant	p.Leu->Leu	Alu	0.0205479
1	99974997	A->G	+	ENSG00000117620	SLC35A3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.25
1	99975018	A->G	+	ENSG00000117620	SLC35A3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.384615
7	102545420	A->G	-	ENSG00000168255	POLR2J3	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.538462
8	102829408	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.361702
8	102829409	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0947368
14	105625360	A->G	-	ENSG00000211892	IGHG4	IG_C_gene	CDS	synonymous_variant	p.Pro->Pro	Alu	0.085034
14	105939817	A->G	-	ENSG00000211933	IGHV6-1	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.0697674
14	105940010	A->G	-	ENSG00000211933	IGHV6-1	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.0588235
14	106005497	A->G	-	ENSG00000211935	IGHV1-3	IG_V_gene	CDS	synonymous_variant	p.Ala->Ala	Alu	0.0833333
14	106062219	A->G	-	ENSG00000211938	IGHV3-7	IG_V_gene	CDS	missense_variant	p.Lys->Glu	Alu	0.0833333
14	106129586	A->G	-	ENSG00000211942	IGHV3-13	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.7
14	106129951	A->G	-	ENSG00000211942	IGHV3-13	IG_V_gene	CDS	synonymous_variant	p.Leu->Leu	Alu	0.321429
14	106185025	A->G	-	ENSG00000211945	IGHV1-18	IG_V_gene	CDS	missense_variant	p.Asn->Ser	Alu	0.117647
14	106185139	A->G	-	ENSG00000211945	IGHV1-18	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.15625
14	106235195	A->G	-	ENSG00000211947	IGHV3-21	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.104478
14	106276746	A->G	-	ENSG00000211950	IGHV1-24	IG_V_gene	CDS	synonymous_variant	p.Leu->Leu	Alu	0.357143
14	106360005	A->G	-	ENSG00000211955	IGHV3-33	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.230769
14	106421760	A->G	-	ENSG00000211959	IGHV4-39	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.157895
14	106511376	A->G	-	ENSG00000211962	IGHV1-46	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.0666667
14	106537890	A->G	-	ENSG00000211964	IGHV3-48	IG_V_gene	CDS	synonymous_variant	p.Arg->Arg	Alu	0.416667
14	106578778	A->G	-	ENSG00000211966	IGHV5-51	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.097561
2	108471576	A->G	+	ENSG00000135968	GCC2	protein_coding	exon	synonymous_variant	p.Gln->Gln	Alu	0.444444
11	112228656	A->G	+	ENSG00000150787	PTS	protein_coding	exon	missense_variant	p.His->Arg	Alu	0.45
10	112449659	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.210526
9	121161884	A->G	+	ENSG00000119397	CNTRL	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.0869565
12	122769636	A->G	+	ENSG00000139726	DENR	protein_coding	three_prime_utr	stop_lost	p.Ter->Trp	Alu	0.0350877
7	128502689	A->G	+	ENSG00000165055	METTL2B	protein_coding	exon	missense_variant	p.Arg->Gly	Alu	0.3
10	131911600	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	1
5	133019133	A->G	-	ENSG00000155329	ZCCHC10	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.153846
10	133297335	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.6
10	133297336	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.181818
10	133297389	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.25
10	133297396	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.181818
2	135747674	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.0689655
2	135747721	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.148148
2	135747729	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.111111
2	135747738	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.09375
2	135747739	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.0666667
2	135747760	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.12
5	138393219	A->G	+	ENSG00000120733	KDM3B	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.709091
3	142422642	A->G	-	ENSG00000114127	XRN1	protein_coding	exon	missense_variant	p.Asn->Asp	Alu	0.615385
7	142529491	A->G	+	ENSG00000278030	TRBV7-9	TR_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.653846
7	142715786	A->G	+	ENSG00000211752	TRBV27	TR_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.259259
7	142715788	A->G	+	ENSG00000211752	TRBV27	TR_V_gene	CDS	missense_variant	p.Arg->Gly	Alu	0.148148
7	142801067	A->G	+	ENSG00000211772	TRBC2	TR_C_gene	CDS	missense_variant	p.Lys->Glu	Alu	1
7	143293183	A->G	+	ENSG00000106144	CASP2	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0869565
5	144169846	A->G	-	ENSG00000145817	YIPF5	protein_coding	Intergenic	missense_variant&splice_region_variant	p.Lys->Arg	Alu	0.0851064
3	150618709	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.0363636
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	exon	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0614035
X	154351582	A->G	-	ENSG00000196924	FLNA	protein_coding	exon	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0675676
1	154964279	A->G	-	ENSG00000160691	SHC1	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.272727
1	156220687	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
1	160332454	A->G	-	ENSG00000122218	COPA	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.202532
4	189943229	A->G	+	ENSG00000109536	FRG1	protein_coding	exon	synonymous_variant	p.Lys->Lys	Alu	0.0720721
4	189952251	A->G	+	ENSG00000109536	FRG1	protein_coding	exon	missense_variant	p.Asn->Asp	Alu	0.166667
4	189957425	A->G	+	ENSG00000109536	FRG1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.825
3	197763561	A->G	+	ENSG00000122068	FYTTD1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.2
2	200885335	A->G	-	ENSG00000240344	PPIL3	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.285714
2	218574009	A->G	+	ENSG00000144580	CNOT9	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0952381
1	225786879	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.6
1	225786898	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.12
1	225786904	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.103448
1	225786912	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.382353
1	225786943	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.181818
2	230253388	A->G	+	ENSG00000079263	SP140	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.103448
2	241324457	A->G	+	ENSG00000168385	2-Sep	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.142857
2	241324488	A->G	+	ENSG00000168385	2-Sep	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0869565
2	241324571	A->G	+	ENSG00000168385	2-Sep	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.133333
19	57864892	A->G	+	ENSG00000204514	ZNF814	protein_coding	exon	.	.	Alu	0.222222
19	2291978	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.5
19	18560270	A->G	+	ENSG00000105700	KXD1	protein_coding	five_prime_utr	.	.	Alu	0.230769
19	18560276	A->G	+	ENSG00000105700	KXD1	protein_coding	five_prime_utr	.	.	Alu	0.428571
19	37324798	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.3
19	37324855	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.0833333
19	37324876	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.157895
21	37410605	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.571429
21	37410613	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.176471
21	37410645	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.136364
21	37410657	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.111111
7	66740097	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.1
7	66740100	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.0869565
10	72220101	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.153846
10	72220172	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0740741
10	72220182	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0666667
10	72220218	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0909091
10	72220232	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0810811
10	72220235	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0833333
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.457143
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.206897
8	143590731	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.235294
3	150618776	A->G	+	ENSG00000198843	SELENOT	protein_coding	five_prime_utr	.	.	Alu	0.0470588
3	179325122	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0746269
3	179325161	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0612245
3	179325235	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0945946
4	134988	A->G	+	ENSG00000250312	ZNF718	protein_coding	Intergenic	.	.	Alu	0.111111
16	213537	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.181818
16	216582	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	216617	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	216622	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.0869565
16	221248	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
18	237295	A->G	-	ENSG00000079134	THOC1	protein_coding	Intergenic	.	.	Alu	0.133333
9	277407	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.166667
X	304088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
17	397545	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
17	399238	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
17	399588	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
17	399596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
17	399613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
17	399662	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
17	399687	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	399694	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
4	466064	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
4	466065	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
16	587945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
16	587946	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
11	689344	A->G	-	ENSG00000177030	DEAF1	protein_coding	Intergenic	.	.	Alu	0.2
12	764919	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.277778
12	764938	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.133333
12	764939	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.235294
12	764965	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.181818
12	764975	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.2
18	787628	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.285714
18	787629	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.428571
18	787634	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.142857
11	927606	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.8
11	927609	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.181818
11	927752	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.3
11	927753	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.2
19	1033398	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.181818
19	1033450	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.3
X	1383515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1383524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.466667
X	1384034	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	1384085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6875
X	1385005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	1385006	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	1385022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	1385218	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
17	1388203	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.4
1	1483156	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intergenic	.	.	Alu	0.461538
1	1836468	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1871419	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.636364
1	1872064	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1875
1	1872153	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.133333
1	1872176	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.233333
1	1872179	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	1872220	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1881506	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.258065
1	1881672	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.461538
1	1881673	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1884204	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1884238	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.277778
1	1884302	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1
1	1884304	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1
1	1884350	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.133333
1	1884415	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.107143
1	1886061	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.272727
1	1886190	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3125
1	1886196	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.235294
1	1886235	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1886261	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.130435
1	1886300	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.318182
1	1886304	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.304348
1	1886312	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.28
17	2038218	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.6
17	2038245	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.454545
17	2038307	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.333333
19	2292113	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2292283	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.117647
19	2292291	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.357143
19	2292300	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1875
19	2292318	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2292323	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	2293104	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.208333
19	2293145	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.208333
19	2293182	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2293906	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.4
19	2293942	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.411765
19	2293948	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.375
19	2294034	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	2499953	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2499984	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.151515
4	2502578	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2502899	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.153846
4	2502930	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.4
4	2540916	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
17	2600319	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2600360	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.230769
17	2636017	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.3
X	2707075	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.272727
X	2717335	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2725323	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.142857
X	2744183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	2744186	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	2744192	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
X	2744198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
X	2744201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	2744215	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	2744216	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
X	2744227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	2744230	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0731707
X	2744255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.403846
X	2744263	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0980392
X	2744277	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	2744279	A->G	+	.	.	.	Intergenic	.	.	Alu	0.22
X	2744287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.145833
X	2744292	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
X	2744299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	2744736	A->G	+	.	.	.	Intergenic	.	.	Alu	0.7
X	2744737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	2745760	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	2745761	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
X	2745779	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
6	2837321	A->G	-	ENSG00000021355	SERPINB1	protein_coding	Intergenic	.	.	Alu	0.125
4	2848100	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.2
Y	2937336	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.181818
Y	2949770	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.181818
19	3181274	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
16	3463683	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.181818
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.142857
2	3541909	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.111111
2	3541910	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0714286
2	3541931	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.125
2	3541948	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0769231
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.285714
2	3541981	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.178571
2	3541987	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.133333
2	3543851	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.111111
11	3698462	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.642857
11	3698471	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.647059
11	3698483	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.666667
11	3743073	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1
11	3743108	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.285714
19	3759207	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.363636
11	3789608	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0869565
11	3789978	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3794677	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.15
20	3912727	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.2
20	3912906	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.2
6	4036363	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.230769
6	4036427	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.153846
6	4036442	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.285714
6	4036805	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.5
17	4290612	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.142857
17	4339339	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.125
17	4339357	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.307692
17	4339373	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.272727
17	4339381	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.2
17	4339483	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.2
7	4787401	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.529412
20	4793752	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.3
16	4816311	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4816738	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.5
16	4816740	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.4
17	5487196	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.266667
19	5655379	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.4
19	5655380	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.2
19	5659185	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.166667
19	5659255	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.0869565
9	5701466	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.4
7	6397826	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.117647
9	6488054	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.1875
9	6488122	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.2
9	6488132	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.230769
7	6751877	A->G	+	ENSG00000187953	PMS2CL	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.08
1	6844549	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.25
1	6851893	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.142857
12	7923493	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.222222
12	7923563	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.454545
12	7923600	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.1875
12	7923842	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.304348
12	7923975	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.310345
12	7923986	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0909091
19	8472024	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.2
19	8472077	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.272727
19	8472683	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.363636
19	8472744	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.181818
19	8472748	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.4
19	8477476	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.1
19	8477567	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.105263
19	8497356	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.25
19	8497359	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.333333
19	8497488	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.125
19	8497493	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.333333
19	8497510	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.142857
18	8616877	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.133333
18	8616911	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.3
18	8616913	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.6
11	9172883	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.1
11	9238907	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9289125	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.833333
11	9289135	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.115385
11	9289173	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0666667
11	9289176	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.148148
11	9289216	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.588235
11	9289221	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.1
11	9289224	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0952381
11	9289263	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.125
11	9289270	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.157895
11	9289276	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.555556
11	9290136	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.310345
11	9291656	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0909091
11	9291672	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0967742
11	9291673	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0645161
11	9293782	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.3
2	9507851	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.25
2	9523944	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.0909091
2	9523999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.5
2	9532537	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.272727
2	9532544	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
4	9538619	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
4	9538637	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
4	9538655	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
1	9564849	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.133333
2	9618787	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.153846
2	9618789	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.153846
12	9659639	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.205882
1	9927378	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.25
1	9927518	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.181818
1	9928632	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.263158
1	9928633	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.263158
1	9928634	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.315789
1	9928660	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0952381
1	9928691	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.272727
1	9928708	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.153846
1	9928776	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.142857
1	9928793	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	10152248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	10152284	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0652174
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.320755
3	10152297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.183333
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.145161
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
3	10152351	A->G	+	.	.	.	Intergenic	.	.	Alu	0.028169
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.246377
3	10152374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.06
3	10152557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10152567	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
3	10152592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.171429
3	10152610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
3	10152634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	10152658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
3	10152659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
3	10152689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.380952
3	10152692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	10152721	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	10152737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
3	10152742	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
3	10152751	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
3	10152752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
3	10152764	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
3	10152866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.483871
3	10152887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	10152888	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.258065
3	10152910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10152933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	10152957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.208333
3	10152965	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
3	10152992	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	10152993	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.347826
3	10153022	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
3	10153044	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.242424
3	10153060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15625
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
3	10153069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	10153089	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
3	10153119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.306122
3	10153128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.102041
3	10153131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	10153167	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
3	10153198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.26087
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148936
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.306122
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0517241
3	10153223	A->G	+	.	.	.	Intergenic	.	.	Alu	0.03125
3	10153238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0338983
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
3	10153266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0877193
3	10153294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0294118
3	10153295	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0294118
3	10153299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
3	10153301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0491803
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0862069
3	10153349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0576923
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.22
3	10153381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.14
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.106383
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.191489
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.152174
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.466667
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
19	10363287	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.2
5	10368423	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
5	10368447	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.133333
5	10368557	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.3
5	10368563	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.583333
5	10368673	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.5
5	10368679	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.125
5	10368680	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.176471
5	10368782	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.133333
5	10368793	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.230769
5	10368835	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.176471
19	10930619	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.352941
19	10930632	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.25
19	10930765	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.148148
19	10930855	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.125
19	10930964	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.111111
19	10930979	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.294118
19	10930981	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.214286
19	10932938	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.769231
19	10933092	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.2
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.636364
19	11450427	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.272727
10	11606887	A->G	-	ENSG00000148429	USP6NL	protein_coding	Intergenic	.	.	Alu	0.4
16	11707573	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.363636
16	11709355	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.2
11	11860000	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.307692
11	11860006	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.272727
16	11889074	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	11911478	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0833333
16	11911483	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	11911501	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.117647
19	11932269	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.272727
19	12001958	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.363636
19	12020752	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.307692
19	12020756	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.2
19	12020757	A->G	+	ENSG00000197647	ZNF433	protein_coding	Intergenic	.	.	Alu	0.2
10	12026801	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.2
1	12256057	A->G	+	ENSG00000048707	VPS13D	protein_coding	Intergenic	.	.	Alu	0.3
19	12289712	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.2
19	12289773	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.5
19	12289796	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.375
19	12289903	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.352941
19	12289904	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.2
10	12358188	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.111111
19	12625547	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.3
19	12731878	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.291667
19	12731897	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.105263
19	12731919	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.117647
19	12732809	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.357143
19	12732996	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.08
19	12733175	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.0877193
18	12850240	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.357143
19	12941191	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0967742
19	12941216	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0740741
19	12941352	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.047619
Y	13395391	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.368421
Y	13395556	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.416667
Y	13395563	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.5
Y	13396013	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.2
Y	13396031	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.4
Y	13396104	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.142857
Y	13396106	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.153846
6	13648271	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.105263
6	13648286	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.15
6	13648308	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.166667
6	13648351	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.153846
6	13650869	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.227273
11	13672341	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.133333
11	13703789	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.333333
11	13703868	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.157895
11	13703915	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.230769
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.352941
11	13703964	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.142857
11	13703989	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.176471
11	13703994	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.176471
11	13703999	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.1875
1	13755823	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	13755997	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.4
19	13759732	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.133333
19	13837925	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	13838162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
19	13838188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
19	13838303	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
19	13838380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
19	13838386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
6	14121360	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.434783
6	14121399	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.137931
6	14121438	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.333333
6	14121439	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.259259
6	14121445	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0740741
6	14121570	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.08
19	14389570	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.12
19	14389573	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.125
19	14389655	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14389724	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0714286
19	14390485	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.272727
19	14398414	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14398568	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0740741
19	14399623	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.117647
19	14399664	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.103448
19	14414884	A->G	+	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.272727
11	14478698	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.25
10	14595522	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.222222
11	14890807	A->G	-	ENSG00000186104	CYP2R1	protein_coding	Intergenic	.	.	Alu	0.133333
10	14905728	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.272727
3	15018271	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.25
3	15019210	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.153846
3	15248846	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.133333
6	15254853	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15254854	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15254921	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	15254931	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.125
19	15357830	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.2
9	15497359	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.117647
9	15497415	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.235294
9	15497423	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.117647
9	15497432	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15700516	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.2
12	15901740	A->G	+	ENSG00000023734	STRAP	protein_coding	Intergenic	.	.	Alu	0.166667
16	15952929	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15952932	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15953126	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15953135	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15953216	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.1
16	15953274	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15953288	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.266667
16	15973900	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.133333
17	16050907	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.111111
17	16050961	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
19	16080601	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0724638
19	16080625	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0784314
19	16080628	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1875
19	16080691	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.333333
19	16080692	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.346939
19	16080705	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0638298
19	16080741	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.266667
19	16080744	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0625
19	16080753	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16080759	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0408163
19	16080764	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.14
19	16082834	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.129032
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16083257	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.235294
19	16083258	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.222222
19	16083297	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16083323	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0869565
19	16083324	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.391304
19	16083395	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16083428	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.222222
19	16085168	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.444444
19	16085194	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16085208	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.611111
19	16085318	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.266667
19	16085354	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16150464	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.272727
19	16155837	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.181818
19	16155845	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.2
19	16156176	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.2
19	16156420	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.166667
19	16156436	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.2
19	16156445	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.363636
19	16156733	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.384615
1	16377465	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.3
19	16636701	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.115385
19	16636731	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16636741	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.3125
19	16636797	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.133333
19	16636891	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16637381	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16637391	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.25
19	16637410	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16637422	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.421053
19	16637429	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.190476
19	16637449	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.157895
19	16639394	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16640280	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.285714
19	16642301	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16642314	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
11	16740482	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.230769
11	16740489	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.285714
11	16740502	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.166667
11	16740521	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.107143
11	16740560	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0487805
11	16740562	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.121951
11	16740578	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.318182
11	16740586	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0851064
11	16740602	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0869565
11	16740696	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.333333
11	16740927	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0740741
11	16740941	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.08
11	16740949	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.125
11	16740962	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.214286
11	16756436	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.388889
11	16756454	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.105263
11	16756468	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.117647
11	16756476	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.764706
11	16756530	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.482759
11	16756531	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.62069
11	16756722	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.666667
11	16756723	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.631579
1	17042721	A->G	-	ENSG00000117118	SDHB	protein_coding	Intergenic	.	.	Alu	0.2
11	17076686	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.315789
19	17095092	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.272727
19	17097271	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17097278	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.363636
19	17098674	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.1875
19	17098747	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.214286
19	17105436	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.230769
19	17105477	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
11	17131507	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.4
19	17178403	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.3
11	17298523	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.181818
11	17298533	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	17337176	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17337193	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.428571
11	17337887	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.294118
11	17337897	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
6	17645386	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.142857
6	17645408	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.105263
6	17645432	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.117647
10	17687201	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.111111
10	17687219	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.833333
10	17687220	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.68
10	17687228	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.3125
10	17687296	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.307692
10	17687315	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.222222
10	17687322	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.136364
10	17687336	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.181818
10	17687354	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.222222
10	17687367	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0645161
10	17687378	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.704545
10	17687404	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.1875
10	17687471	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.04
8	17973598	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.1875
17	18022542	A->G	-	ENSG00000171953	ATPAF2	protein_coding	Intergenic	.	.	Alu	0.2
17	18273851	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.133333
17	18273875	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.125
17	18273884	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.133333
19	18276129	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
11	18333720	A->G	+	ENSG00000110768	GTF2H1	protein_coding	Intergenic	.	.	Alu	0.222222
11	18333987	A->G	+	ENSG00000110768	GTF2H1	protein_coding	Intergenic	.	.	Alu	0.157895
11	18520782	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.222222
11	18521774	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.1875
11	18523121	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.105263
19	18908173	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.192308
19	18908187	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.4
19	18908188	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.181818
19	18908211	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.24
19	18908318	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.263158
19	18908319	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	18908327	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.615385
19	18908370	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.285714
19	18908681	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.357143
19	18909595	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.296296
19	18909604	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.153846
19	18909608	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0740741
19	18909615	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
19	18909616	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.428571
19	18909624	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.103448
19	18909630	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.2
19	18909714	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0606061
19	18909729	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0833333
19	18909750	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.37037
19	18909786	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.315789
19	18912244	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0909091
19	18914458	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.470588
19	18914459	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.176471
19	18914502	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.222222
19	18914849	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.466667
19	18917532	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	18917543	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.125
19	19329776	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.125
19	19444680	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.181818
12	19446461	A->G	+	ENSG00000139154	AEBP2	protein_coding	Intergenic	.	.	Alu	0.166667
13	19714558	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0425532
13	19714580	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0487805
13	19714635	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0512821
13	19714648	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	19714691	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.263158
13	19714732	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	19714741	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.075
3	19952093	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.26087
13	19986082	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.166667
13	19986095	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.166667
22	20067636	A->G	+	ENSG00000236540	AC006547.1	antisense	Intergenic	.	.	Alu	0.3
22	20067646	A->G	+	ENSG00000236540	AC006547.1	antisense	Intergenic	.	.	Alu	0.3
22	20067678	A->G	+	ENSG00000236540	AC006547.1	antisense	Intergenic	.	.	Alu	0.3
X	20129393	A->G	-	ENSG00000173674	EIF1AX	protein_coding	Intergenic	.	.	Alu	0.0769231
2	20292589	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.4
2	20345135	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.3
2	20345192	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.421053
2	20345286	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20345287	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20345342	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.133333
6	20552147	A->G	+	ENSG00000145996	CDKAL1	protein_coding	Intergenic	.	.	Alu	0.272727
22	20559057	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.153846
22	20562148	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.1
19	20641805	A->G	-	ENSG00000188171	ZNF626	protein_coding	Intergenic	.	.	Alu	0.153846
19	20641822	A->G	-	ENSG00000188171	ZNF626	protein_coding	Intergenic	.	.	Alu	0.25
19	20642413	A->G	-	ENSG00000188171	ZNF626	protein_coding	Intergenic	.	.	Alu	0.25
1	20647924	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.153846
1	20647950	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	20751092	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.272727
1	20755311	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.217391
1	20755463	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.157895
1	20755465	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.294118
1	20755489	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.176471
1	20755544	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	20755569	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.533333
1	20756487	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0952381
1	20756494	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.130435
1	20756758	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.444444
1	20756783	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.333333
1	20756784	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0909091
1	20756812	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.111111
1	20756818	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.172414
1	20756844	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.26087
1	20756847	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.434783
1	20756912	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.421053
1	20756961	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.176471
1	20756977	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.444444
1	20756982	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	20756983	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.421053
1	20758547	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.3
1	20758549	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20760115	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.214286
13	20837544	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.181818
13	21003378	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.142857
19	21315948	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.181818
19	21315958	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.3
1	21330510	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.2
1	21330517	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.538462
13	21442630	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.294118
13	21442643	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.375
13	21442698	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.464286
22	21833994	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.3
16	21954782	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.1
1	22062629	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.0869565
14	22916154	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.25
14	22916178	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.153846
14	22916354	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.1875
14	22916408	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.25
8	23062493	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.272727
14	23074039	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.615385
14	23074048	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.714286
14	23082956	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.142857
1	23152758	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.25
1	23152798	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.384615
1	23154464	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.5
7	23183294	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.2
8	23187433	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
8	23187501	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
7	23189651	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.133333
22	23199967	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.166667
1	23326698	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.2
1	23326699	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.157895
1	23326763	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.25
1	23333944	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.25
13	23370932	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.153846
7	23518963	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.08
7	23518969	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0869565
2	23781602	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	23782044	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.285714
2	23782096	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
3	23816691	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.25
3	23832793	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0882353
3	23832954	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.136364
3	23832959	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.25
2	23841004	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	23845762	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
3	23848282	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.176471
3	23848283	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.117647
3	23848349	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.538462
3	23848350	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.5
19	24055324	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.176471
19	24055349	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.384615
19	24055379	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.272727
X	24076350	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.5
X	24076387	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.1
X	24076413	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.333333
X	24076443	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.130435
X	24076445	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.0869565
X	24076446	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.318182
X	24078287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0263158
19	24089935	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.117647
19	24089975	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.1875
2	24090904	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.272727
19	24091129	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
19	24091219	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.166667
14	24170152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.35
14	24170153	A->G	+	.	.	.	Intergenic	.	.	Alu	0.45
14	24170182	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
14	24170938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
14	24170976	A->G	+	.	.	.	Intergenic	.	.	Alu	0.315789
14	24170977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
14	24171039	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
14	24171040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
14	24171058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
14	24171078	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
2	24337764	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.272727
2	24347083	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	24347976	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.2
13	24425135	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
4	24531461	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.08
4	24531468	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.142857
4	24531530	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.1
4	24531541	A->G	-	ENSG00000109606	DHX15	protein_coding	Intergenic	.	.	Alu	0.0952381
22	24573093	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.3
22	24573096	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.181818
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.15
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.190476
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0540541
22	24573655	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.217391
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.173913
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.25
22	24573725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0769231
22	24573734	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.09375
22	24573787	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.08
22	24573814	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.157895
22	24573832	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.115385
22	24573833	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.192308
22	24573838	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.125
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.409091
22	24574602	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.166667
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.272727
22	24574646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.181818
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.181818
22	24574678	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.166667
22	24574725	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.166667
22	24574742	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.344828
22	24574751	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0606061
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.4375
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.230769
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0512821
6	24710358	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.05
6	24710363	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.047619
6	24710377	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0434783
15	24967454	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.15
15	24967521	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.103448
13	25306284	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.133333
15	25431405	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.176471
15	25431428	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.357143
15	25431615	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.238095
15	25433348	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.185185
15	25433351	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.125
15	25433352	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.125
15	25433354	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.111111
15	25433356	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.115385
15	25433358	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.192308
15	25433391	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.15
15	25433467	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.333333
1	25437841	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.222222
1	25437870	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.238095
1	25438769	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.333333
1	25438819	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.142857
1	25440278	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.117647
1	25453540	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.2
1	25456173	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.5
1	25456237	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.235294
15	25768617	A->G	-	ENSG00000206190	ATP10A	protein_coding	Intergenic	.	.	Alu	0.733333
18	26169674	A->G	-	ENSG00000154611	PSMA8	protein_coding	Intergenic	.	.	Alu	0.2
1	26720653	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26720676	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26720757	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.2
10	26772828	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.1
10	26772994	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.125
10	26773027	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.205882
10	26773377	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.315789
10	26773427	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.157895
12	27035169	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.1875
12	27039780	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.230769
12	27039902	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.166667
10	27125733	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.166667
10	27125779	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.222222
10	27125805	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.263158
10	27125818	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.0909091
10	27125821	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.222222
10	27125936	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.115385
10	27125958	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.133333
17	27298045	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.230769
17	27298046	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.153846
17	27302147	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.157895
17	27302153	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.294118
13	27652613	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.545455
13	27652616	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.181818
13	27652621	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.416667
13	27652651	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.181818
13	27653168	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.705882
1	27880607	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.176471
1	27881401	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27881434	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.25
22	27909360	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.25
13	28188486	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0588235
13	28188521	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.4375
13	28188543	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.380952
13	28188552	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.380952
13	28189436	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28189461	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.176471
13	28189471	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.444444
13	28189501	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28189525	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.228571
13	28190528	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28193596	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28193612	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28193622	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28193628	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28193663	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28194114	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.214286
13	28198230	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.363636
13	28198231	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.272727
13	28205657	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.130435
13	28205678	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0714286
13	28205736	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
10	28525594	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.2
10	28525595	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.333333
10	28525616	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.230769
10	28525686	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.52381
10	28525689	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.238095
10	28525690	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0909091
10	28525726	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.555556
10	28525729	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.25
10	28525742	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0909091
10	28525763	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.652174
10	28538311	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.111111
10	28538319	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.125
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.384615
10	28538435	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.12
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.222222
10	28538474	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.1
10	28538534	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.190476
10	28538665	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.206897
10	28538676	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0625
10	28538708	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.181818
10	28538711	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0625
10	28538827	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0638298
10	28539638	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.16
10	28539639	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.06
10	28539685	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0731707
10	28539688	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.230769
10	28539760	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.272727
10	28544944	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0425532
17	28667122	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.142857
17	28667125	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.142857
17	28667250	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.6
17	28667256	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.4
17	28722058	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.416667
17	28722068	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.142857
17	28722308	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.272727
17	28722315	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.0952381
17	28722353	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.363636
2	28763953	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0606061
2	28764846	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28764870	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	28784733	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.136364
2	28784773	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28784840	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0487805
2	28784875	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.05
2	28786170	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0526316
2	28786188	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.230769
2	28786214	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.222222
2	28786247	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28786584	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0888889
2	28786641	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.157895
2	28786654	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.368421
2	28788932	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.270833
2	28788938	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.12963
2	28788957	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.113208
2	28788961	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0754717
2	28789269	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0344828
2	28790159	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0701754
2	28792466	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0238095
22	28797530	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0714286
22	28798405	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.153846
22	28798848	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0769231
16	28831469	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.2
16	28831473	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.25
16	28955074	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.210526
16	28957868	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.166667
16	28957877	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.3
16	28957904	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.583333
16	28958083	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.266667
16	28958085	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.333333
16	28958301	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.363636
16	28958319	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.363636
1	29174900	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.25
1	29177419	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0576923
1	29177420	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.04
1	29179428	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0217391
22	29198292	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
22	29199040	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
22	29199072	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
22	29287325	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.123457
22	29287369	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.216667
22	29287943	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0576923
22	29287944	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.259259
16	29584361	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
17	29755786	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.5
17	29755800	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
8	30167245	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.2
8	30167479	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.125
8	30178287	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.166667
8	30178299	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.272727
8	30178316	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.181818
17	30485632	A->G	+	ENSG00000108587	GOSR1	protein_coding	Intergenic	.	.	Alu	0.307692
6	30492025	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0432692
6	30492040	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0208333
6	30492075	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0222222
6	30492077	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0330882
7	30622846	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.133333
7	30622876	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.153846
14	30654440	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.181818
1	30752978	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.166667
17	30816563	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.272727
17	30816582	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.2
1	31019135	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
14	31019995	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.2
14	31020004	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.181818
1	31025619	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.421053
1	31025623	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.157895
1	31025667	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.277778
1	31025677	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.133333
1	31025684	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31033734	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
1	31046645	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31048746	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31048747	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31056835	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.153846
16	31121856	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.125
16	31121881	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.15
16	31121897	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.111111
16	31122003	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.192308
16	31122013	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0714286
16	31122025	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0571429
16	31122692	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.142857
16	31122694	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31122702	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0833333
16	31122707	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0833333
16	31122723	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.12
16	31122734	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.192308
16	31122754	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31122760	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.73913
16	31122766	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.347826
16	31122770	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31122802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.230769
16	31122844	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31122859	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.166667
16	31122867	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.272727
16	31123240	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.428571
16	31123248	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31123286	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.428571
16	31123310	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.35
16	31123343	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.307692
16	31123356	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.529412
16	31123382	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.8
16	31123383	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.285714
16	31123406	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.230769
16	31123443	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31123470	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.5
16	31123471	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.333333
16	31123483	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.461538
16	31123530	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.266667
16	31123641	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.153846
16	31123646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.230769
14	31137664	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.363636
14	31137688	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	1
14	31137693	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.636364
16	31453062	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.166667
16	31453063	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.166667
16	31453227	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.2
16	31453262	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.2
20	31564313	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.153846
1	31922888	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.2
2	31999988	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	32000153	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.117647
10	32013013	A->G	-	ENSG00000170759	KIF5B	protein_coding	Intergenic	.	.	Alu	0.3
18	32058035	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.3
18	32121410	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.214286
5	32152700	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0909091
5	32156268	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0909091
5	32156281	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.428571
5	32165120	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.357143
5	32165181	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.296296
1	32167719	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.166667
10	32336072	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.181818
10	32357668	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.105263
2	32372731	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.318182
1	32373812	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.142857
17	32389664	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
2	32396823	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.3
5	32429259	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2
17	32450820	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.0714286
17	32451018	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.125
17	32451036	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.2
17	32451050	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.111111
17	32451109	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.2
2	32455265	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.111111
2	32507253	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.15
2	32507254	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.1
2	32507309	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0833333
2	32520732	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.307692
2	32520756	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.642857
2	32520762	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.125
5	32588763	A->G	+	ENSG00000113387	SUB1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	32676114	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.08
1	32676349	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.166667
1	32676423	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.2
7	32758721	A->G	+	ENSG00000229358	DPY19L1P1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
9	33027432	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.075
9	33027730	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	33027881	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.416667
9	33037628	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0869565
9	33037632	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.333333
9	33038085	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.212121
9	33038105	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.108108
9	33038196	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.214286
11	33268323	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33268353	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33268363	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33268412	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.1
11	33268464	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	33268470	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33268500	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.25
11	33268506	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	33268516	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	33270760	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33279260	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33279270	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
6	33307444	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.153846
6	33307462	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.111111
6	33307470	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.157895
6	33307530	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.133333
21	33404873	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.272727
21	33405012	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.166667
21	33405973	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.272727
21	33405986	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.230769
3	33434783	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.166667
3	33434890	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.5625
3	33547927	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.2
3	33548035	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.1875
9	33831180	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.2
9	33831187	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.133333
19	34192459	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.733333
9	34193078	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.294118
9	34193082	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.105263
19	34202373	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.142857
19	34202425	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.125
19	34202784	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.294118
19	34202794	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.153846
19	34202796	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.142857
19	34202925	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.3
19	34203682	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34204440	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.117647
19	34204953	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0909091
19	34205047	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.142857
19	34205064	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.111111
6	34325419	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.230769
20	34370048	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
20	34370502	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.166667
20	34370608	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.117647
20	34430752	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.181818
20	34467408	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
20	34467422	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.3
20	34467439	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.416667
20	34468779	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
19	34471436	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	34471501	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	34523691	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.266667
14	34538127	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.214286
21	34853945	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.5
21	34853993	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	34950367	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.25
18	35064130	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.142857
17	35076088	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.666667
17	35076090	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.333333
17	35076154	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35076171	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35076261	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.142857
17	35076436	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.272727
17	35076437	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.454545
17	35076451	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.214286
17	35076464	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.466667
17	35076516	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
14	35098283	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.15
14	35109655	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.157895
14	35109728	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.1
14	35109729	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.193548
14	35115099	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.181818
14	35115210	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.133333
14	35115225	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.307692
14	35115441	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.181818
22	35269258	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.2
6	35683402	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0909091
6	35683407	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.190476
6	35683520	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.333333
6	35683526	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.210526
6	35683541	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0625
6	35683568	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.115385
6	35683576	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.111111
6	35683914	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.230769
6	35683923	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.272727
6	35683976	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.272727
6	35683991	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.153846
6	35684008	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.166667
6	35684010	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.272727
6	35684428	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.277778
6	35684429	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.333333
6	35684459	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.225806
20	35725527	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0363636
1	35816727	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.3
7	35888548	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.133333
7	35888634	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
7	35888655	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.3
7	35888752	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
6	36035968	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.3
6	36035969	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.3
1	36476745	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0833333
1	36476825	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.15
1	36476878	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0909091
1	36477959	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.8
6	36541934	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.166667
6	36541993	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.153846
6	36542039	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.153846
6	36542048	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.25
6	36542061	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.230769
17	36562695	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.272727
17	36562809	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.111111
17	36562818	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	36566556	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.12
17	36566630	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.111111
17	36571722	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36576082	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.272727
20	36578293	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.214286
20	36578294	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.214286
20	36578328	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.363636
20	36578334	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.25
20	36578348	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.583333
20	36585007	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.2
5	36968659	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.4
2	37111467	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.166667
9	37164173	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.692308
7	37200147	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.230769
7	37200206	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.333333
7	37200212	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.666667
7	37200356	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.454545
7	37200722	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.166667
7	37200748	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.307692
7	37200749	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.333333
3	37260344	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	37262379	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.2
3	37265782	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.25
3	37265783	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.538462
3	37265951	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.636364
3	37266014	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.4
3	37273993	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.117647
3	37274003	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.117647
19	37324796	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.2
19	37328161	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.133333
19	37328183	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.333333
19	37328189	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.117647
19	37328229	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.142857
21	37410564	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.125
21	37410941	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.214286
21	37411102	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.235294
21	37411103	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.352941
21	37427130	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.571429
21	37427131	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.4
21	37427135	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.214286
21	37427386	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0909091
4	37618942	A->G	-	ENSG00000154274	C4orf19	protein_coding	Intergenic	.	.	Alu	0.1875
9	37885590	A->G	-	ENSG00000122696	SLC25A51	protein_coding	Intergenic	.	.	Alu	0.142857
8	37893171	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.375
8	37893172	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.3125
8	37893212	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.588235
8	37893213	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.294118
8	37893269	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.235294
8	37893278	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.533333
8	37893668	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.75
8	37893728	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.473684
8	37893733	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.117647
8	37893738	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.666667
1	37992886	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	37992887	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	37992915	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	38022402	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.2
10	38023010	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.125
10	38023026	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.125
8	38219720	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
8	38219740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
8	38219745	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
8	38219756	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38219760	A->G	+	.	.	.	Intergenic	.	.	Alu	0.555556
8	38239105	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.5
8	38239118	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38239140	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.235294
8	38239141	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.25
8	38239228	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.230769
8	38448404	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.133333
8	38463007	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.2
22	38695545	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.3
22	38711660	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.583333
22	38711681	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.2
20	38817308	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0384615
20	38817329	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0416667
20	38817372	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0357143
20	38817480	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0392157
20	38817950	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.105263
20	38818996	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.031746
20	38841430	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0833333
19	38844936	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.0606061
19	38844941	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.0606061
19	38844946	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.0857143
19	38844997	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.175
19	38844999	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.135135
19	38845162	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.0943396
19	38845175	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.125
20	38851759	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.166667
20	38851812	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.115385
20	38884950	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.166667
20	38884956	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.153846
8	38913313	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
1	38993710	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.142857
2	39052908	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.333333
2	39054066	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39054200	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.1
2	39054208	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.1
3	39058996	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.166667
3	39059025	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.15
2	39112436	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.3
2	39112504	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.117647
2	39115553	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.333333
2	39115563	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.105263
2	39115575	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	39115579	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.136364
2	39115636	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	39115637	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	39115646	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
14	39178439	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.0952381
14	39178521	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.153846
14	39178837	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.2
19	39334880	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.0555556
19	39335029	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.333333
3	39409006	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.181818
4	39725743	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39725782	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.3
4	39896269	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.230769
4	39896521	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	39896574	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.5
4	39896638	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.153846
4	39952925	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.176471
4	39952937	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.25
22	40048337	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.166667
22	40048338	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40048378	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.111111
22	40048430	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.142857
22	40048864	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.368421
22	40048902	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.588235
22	40054947	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40056530	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.111111
4	40229380	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.105263
4	40229387	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.227273
4	40229397	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.153846
4	40229471	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.111111
4	40229523	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.285714
4	40235705	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.230769
1	40377024	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0945946
1	40377031	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0547945
1	40377052	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.128205
1	40377053	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.205128
1	40377104	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0857143
1	40377214	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.146667
1	40377229	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0879121
1	40378210	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0512821
13	40646371	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	40655705	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.133333
13	40656969	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.3
13	40656990	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40656998	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40657038	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.357143
13	40657576	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40657584	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0952381
13	40657607	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.222222
13	40949614	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0555556
13	40953141	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.125
22	40955334	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.3
13	40997325	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.210526
13	40997355	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0740741
13	40997369	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.190476
13	40997386	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0909091
13	40997490	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1875
13	40997493	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.125
13	40997625	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.222222
13	41011681	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.179487
13	41011694	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.103448
13	41011716	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0638298
13	41012623	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0566038
13	41012664	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.129032
13	41012682	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	41012757	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1
13	41012813	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.04
15	41038152	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.4
20	41040659	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41041214	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.125
20	41041216	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	41041290	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.129032
20	41041291	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0645161
20	41041297	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0645161
20	41041298	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0645161
20	41041323	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.12
20	41041356	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	41041365	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.222222
20	41041968	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41042009	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.105263
20	41042013	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	41042050	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.142857
20	41042090	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.2
20	41042130	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.176471
20	41042145	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.111111
20	41042162	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.166667
13	41042193	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.125
13	41052003	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
22	41109189	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.277778
22	41137168	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.181818
3	41215185	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.125
19	41266180	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.210526
19	41266439	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.142857
19	41266493	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.2
19	41337096	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.3
15	41444556	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.357143
22	41655799	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.3
17	41774480	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.272727
17	41778992	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.214286
17	41779908	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.0909091
17	42004093	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.1
17	42007750	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.230769
6	42034074	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42034683	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.230769
6	42034684	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	42034758	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.133333
6	42036568	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.125
15	42238216	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.615385
15	42238217	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.307692
15	42238229	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.153846
15	42238311	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.125
15	42238740	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.166667
2	42259167	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.470588
2	42259168	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.333333
2	42281165	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.636364
2	42281231	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
1	42301360	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.3
1	42301394	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.4
12	42359859	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.190476
12	42359893	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.176471
12	42359898	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.625
12	42359931	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.117647
12	42359932	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.1875
12	42359997	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.357143
17	42384829	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42386687	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.0645161
8	42533359	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.153846
8	42533530	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.285714
8	42533533	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.416667
8	42533534	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.181818
8	42533722	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.7
8	42533756	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.5
8	42534059	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.153846
8	42534082	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.142857
8	42534105	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.4
8	42534193	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42534216	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.363636
8	42534277	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.230769
8	42534281	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.153846
8	42534295	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.214286
1	42699671	A->G	+	ENSG00000065978	YBX1	protein_coding	Intergenic	.	.	Alu	0.136364
1	42699715	A->G	+	ENSG00000065978	YBX1	protein_coding	Intergenic	.	.	Alu	0.1
22	42836248	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.214286
6	42940304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
6	42941505	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0909091
6	42941508	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.142857
6	42941682	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.272727
6	42941689	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.272727
6	42941899	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.142857
6	42941916	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.277778
6	42942346	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.153846
6	42942350	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.307692
6	42942373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.214286
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.733333
6	42942480	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.9
6	42942481	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.9
6	42943148	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.352941
6	42943158	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.210526
6	42943175	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.166667
6	42943183	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	42943193	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.111111
6	42943221	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0666667
6	42943240	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.208333
6	42943241	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0909091
6	42943242	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0909091
6	42943257	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.222222
8	43070092	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.416667
8	43070098	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.230769
5	43128775	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.47619
5	43128850	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0869565
5	43128851	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.130435
5	43128883	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0909091
5	43128963	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.1
5	43128998	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.125
5	43129038	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.3125
5	43129073	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.125
5	43129074	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.357143
5	43129136	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.181818
5	43129188	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.285714
5	43129198	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43129216	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.130435
5	43129340	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.236842
10	43141123	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.133333
10	43141124	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.333333
10	43141489	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.416667
5	43153548	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.3
1	43661397	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.615385
1	43661423	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.2
15	43749821	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.25
2	44209520	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.333333
2	44209630	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.166667
2	44222854	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.222222
2	44222895	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0606061
2	44222898	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0606061
2	44222910	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0512821
2	44222960	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.285714
2	44222970	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.216216
2	44222972	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44222976	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0789474
2	44223079	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44223084	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.125
2	44223094	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.125
2	44223554	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.115385
2	44223631	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.333333
2	44223632	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.294118
2	44223695	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.363636
2	44223722	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.133333
2	44223737	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.538462
2	44223766	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.357143
2	44223773	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.214286
17	44445598	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.153846
17	44445699	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.181818
17	44446502	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.2
1	44463270	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.285714
15	44470648	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.181818
20	44515852	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.142857
15	44522308	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.272727
1	44627230	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
7	44832684	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0229885
7	44832686	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0243902
7	44832692	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0298507
7	44832701	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.463415
7	44832704	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.125
7	44832705	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0506329
7	44832743	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0416667
7	44832756	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0289855
7	44832777	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0425532
7	44832820	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.30303
7	44832822	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.193548
7	44832828	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0625
7	44832838	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44832867	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.133333
7	44832874	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.268293
7	44832881	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.05
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.108696
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44832912	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.05
7	44832918	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0540541
7	44833090	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0941176
7	44833102	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0493827
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.150685
7	44833133	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.192771
7	44833140	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44833145	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0779221
7	44833223	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0547945
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.285714
7	44833263	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.119403
7	44833264	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0307692
7	44833280	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.031746
7	44833300	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.475
7	44833305	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.116279
7	44833329	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44833330	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44833371	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.482759
7	44833397	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.448276
7	44833402	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0606061
7	44833404	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.272727
7	44833453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.352941
7	44833460	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.277778
7	44833485	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0526316
7	44833499	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0444444
7	44833507	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.5
7	44833508	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.204545
7	44833516	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0526316
7	44833623	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.122449
7	44834894	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0540541
7	44834921	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.230769
7	44836002	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44836085	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0952381
7	44836093	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0833333
7	44836235	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0588235
7	44836236	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0666667
7	44836242	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0645161
7	44838082	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.611111
7	44838099	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44838478	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.9
7	44838479	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44838558	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.3
7	44838566	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.347826
7	44838567	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.318182
7	44840278	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0526316
7	44840279	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.117647
X	44883260	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44883323	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.3
X	44883888	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44893107	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.166667
X	44893116	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.294118
X	44893138	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.384615
19	45006305	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0408163
19	45006334	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0833333
19	45006385	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.15625
19	45006390	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45006799	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45006802	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.3
19	45012582	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0588235
19	45012584	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0967742
19	45012629	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0555556
19	45012884	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.151515
19	45012886	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.114286
19	45012887	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0909091
19	45012890	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0833333
19	45012891	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0555556
19	45012975	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0816327
19	45013350	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0588235
19	45013361	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.15
19	45013375	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.075
19	45013712	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45013747	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.190476
19	45013764	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.08
19	45013781	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0526316
19	45015501	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45015515	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45015544	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.130435
19	45015588	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45015592	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45015655	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45015722	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45016758	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.12
19	45016766	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0689655
19	45065284	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.133333
19	45065296	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.125
19	45065332	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.266667
19	45066544	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.25
19	45066568	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.133333
14	45207568	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.166667
14	45207591	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.421053
14	45207613	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.227273
14	45208454	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.153846
14	45208604	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.125
14	45208605	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.242424
14	45209453	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.230769
14	45209531	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.115385
17	45217631	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.2
17	45467226	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	1
17	45505605	A->G	-	.	.	.	Intergenic	.	.	Alu	0.533333
17	45505641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.785714
17	45505642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.642857
17	45505676	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
17	45505982	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
17	45506007	A->G	-	.	.	.	Intergenic	.	.	Alu	0.714286
17	45506025	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	45506051	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
17	45506133	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	45506702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
1	45648065	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45653304	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.209302
1	45653316	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45653331	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	45653587	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.105263
1	45653954	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.545455
1	45656781	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.125
1	45656782	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.3125
1	45656794	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
1	45656884	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.146341
1	45656885	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.15
1	45656889	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.142857
1	45656944	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.107143
1	45671429	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
19	45857853	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.4
12	45953468	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0952381
12	45953484	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.142857
12	45954654	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0769231
12	45954662	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0526316
12	45954685	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0952381
10	45993392	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.176471
10	45993418	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.133333
10	45994130	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.133333
10	45994138	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.214286
10	45994169	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.333333
10	45994218	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.142857
10	45994219	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.285714
10	45994289	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.4
17	46128071	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.222222
17	46148641	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.137931
17	46148672	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.25
17	46148676	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0714286
17	46148711	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	46148723	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.269231
17	46148762	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0769231
17	46148818	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0689655
17	46148828	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.148148
17	46155269	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.2
17	46160383	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0833333
17	46160395	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.25
21	46322256	A->G	-	ENSG00000160298	C21orf58	protein_coding	Intergenic	.	.	Alu	0.230769
17	46497961	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
11	46625086	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.181818
11	46625094	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.0869565
11	46627852	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.153846
11	46627900	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.133333
11	46628317	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.166667
11	46636431	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.2
16	46654771	A->G	-	.	.	.	Intergenic	.	.	Alu	0.444444
16	46654781	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
16	46654785	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
16	46654797	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
16	46654975	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
3	46975450	A->G	-	ENSG00000160799	CCDC12	protein_coding	Intergenic	.	.	Alu	0.2
3	46975451	A->G	-	ENSG00000160799	CCDC12	protein_coding	Intergenic	.	.	Alu	0.2
3	47100081	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.272727
3	47132430	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
X	47151172	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.272727
X	47152092	A->G	+	ENSG00000182872	RBM10	protein_coding	Intergenic	.	.	Alu	0.2
17	47169106	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.166667
17	47169115	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.133333
17	47169129	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.157895
17	47169168	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.133333
17	47169173	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.235294
11	47170107	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.170213
11	47170114	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0392157
11	47480149	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.333333
11	47480198	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47480360	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480817	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.423077
11	47480818	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.192308
11	47480887	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47480924	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47481172	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.214286
11	47481248	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.133333
11	47481265	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.235294
11	47481323	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47481362	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.230769
11	47481403	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
17	47488813	A->G	-	ENSG00000228782	MRPL45P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
17	47488827	A->G	-	ENSG00000228782	MRPL45P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
20	47510281	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.181818
20	47510313	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.3
20	47513470	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
20	47513511	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.117647
20	47513547	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.277778
20	47513548	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.111111
11	47534121	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.125
11	47534125	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47534167	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47537993	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47537998	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47538054	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.5
11	47542560	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.333333
11	47542569	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.214286
11	47542590	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47542630	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47542749	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47542779	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47542996	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.4
17	47573661	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.363636
11	47740013	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
2	47825669	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47877125	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47878857	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.166667
2	47878879	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.153846
19	48328940	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.275862
19	48328957	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.21875
19	48329042	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.193548
19	48329077	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.116279
16	48366999	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.0952381
16	48377821	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.130435
3	48691941	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.230769
3	48691944	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
3	48697423	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.173913
3	48697426	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0833333
3	48697431	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.136364
3	48697454	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.136364
3	48697627	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.363636
3	48698387	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.1875
3	48699151	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.3
3	48699167	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.16129
3	48699939	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.105263
3	48702604	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.363636
3	48702608	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.461538
3	48714455	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
3	48714461	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.307692
17	48867409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	48936500	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	48936505	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.111111
3	49010338	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.7
3	49010355	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.615385
3	49010356	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.230769
3	49010461	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.166667
3	49010529	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.272727
3	49010530	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.4
3	49010937	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.5
3	49010938	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.916667
3	49010945	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.333333
15	49034772	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.266667
15	49034889	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.4
15	49034957	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.428571
3	49063727	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49064351	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.352941
3	49064472	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.416667
3	49069637	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.2
3	49070126	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.166667
20	49071515	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.166667
20	49071563	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.153846
20	49071597	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.2
3	49089180	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49321545	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.272727
3	49321552	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.12
3	49321596	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.105263
3	49321605	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.1
3	49321606	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.684211
3	49321632	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.684211
3	49321657	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.52
3	49321662	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.12
3	49321663	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.12
18	49389787	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.647059
3	49406976	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.4
14	49584176	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.107143
22	49864760	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.181818
10	49962475	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.153846
10	49966691	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.272727
10	49966705	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.181818
13	50065625	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.272727
13	50065631	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.642857
3	50097141	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.35
3	50097207	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50097275	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.235294
3	50097281	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.133333
3	50099078	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0754717
3	50099093	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0833333
3	50099134	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.097561
3	50099148	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.241379
3	50099170	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0930233
3	50099188	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0487805
3	50111438	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.140625
3	50111451	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.261538
3	50111476	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50111477	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0816327
3	50111481	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.311111
3	50111542	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.121212
3	50111564	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1875
3	50111642	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.173077
3	50111648	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0377358
3	50111654	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0392157
3	50112155	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.130435
3	50112269	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.227273
3	50112295	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.217391
3	50112360	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.625
3	50112361	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.26087
14	50115290	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.272727
12	50161715	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.133333
12	50164340	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.4
12	50164348	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.4
12	50164349	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.2
12	50164352	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.545455
12	50164353	A->G	-	ENSG00000139624	CERS5	protein_coding	Intergenic	.	.	Alu	0.272727
14	50193919	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50193948	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.230769
14	50197781	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0769231
14	50197785	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.08
14	50197821	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.222222
14	50197826	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.16
14	50197827	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.32
14	50197899	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.25
14	50197962	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.166667
3	50333699	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.357143
3	50333726	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.166667
3	50335169	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	50335409	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	50335454	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0967742
3	50335770	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0689655
3	50335807	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.119048
3	50335809	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.119048
3	50335829	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.170732
3	50335873	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.138889
7	50339704	A->G	+	ENSG00000185811	IKZF1	protein_coding	Intergenic	.	.	Alu	0.133333
15	50345392	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50345393	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.25
15	50345467	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.142857
15	50345472	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.466667
15	50347060	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.117647
15	50348285	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.222222
12	50409427	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.2
5	50413648	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.0833333
5	50413652	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.153846
5	50413659	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.142857
15	50656535	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.3
17	50730115	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.307692
17	50730117	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.75
17	50730138	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.4
17	50730328	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.130435
17	50730368	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.1
17	50730400	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.352941
17	50730401	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.4375
17	50730450	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.15
17	50730464	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.15
17	50730872	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.111111
17	50730889	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.15
17	50730890	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.1
17	50731238	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0952381
17	50734976	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.210526
16	50748427	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0606061
14	50801366	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.285714
14	50803932	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.136364
14	50803965	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.133333
14	50804001	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.166667
20	50922704	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.105263
20	50923578	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.2
17	50998095	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	50998128	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51027214	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.272727
17	51054219	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51054231	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.4
17	51054277	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
1	51451979	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.105263
1	51452020	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.153846
1	51452057	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.25
1	51452152	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.2
3	51487749	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.1875
8	51855919	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.333333
8	51855941	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.619048
8	51855948	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.125
19	52193650	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.222222
19	52193670	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.153846
19	52193703	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.533333
19	52193750	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.588235
19	52193770	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.409091
19	52193857	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.333333
19	52193910	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.363636
19	52194034	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.578947
3	52415252	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.272727
3	52415261	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.153846
3	52415277	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.272727
3	52415296	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.166667
3	52415297	A->G	+	ENSG00000010318	PHF7	protein_coding	Intergenic	.	.	Alu	0.416667
3	52475102	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.2
15	52563013	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.125
19	52618121	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.190476
19	52618122	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.428571
13	52629816	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.307692
13	52630414	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4375
8	52698191	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.04
8	52698228	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0576923
8	52698483	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	52698514	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	52698533	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.08
8	52698534	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.12
8	52698584	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.111111
8	52698585	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	52698828	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0487805
8	52698854	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.243243
8	52698862	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0526316
8	52698899	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.28
8	52698923	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.08
8	52698928	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.238095
8	52698933	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	52698937	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	52698963	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	52698964	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	52701199	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	52701215	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.1875
8	52701219	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.157895
8	52701234	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	52701237	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.12
8	52701260	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0512821
8	52701304	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0851064
8	52701338	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	52701362	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.1
8	52701397	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0697674
8	52701398	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0888889
8	52701420	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0666667
8	52706401	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	52706796	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.5625
8	52706799	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.647059
8	52706855	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.259259
8	52706857	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.730769
8	52706889	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.117647
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.457143
14	52714633	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.133333
14	52714642	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.153846
14	52714772	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.125
14	52714787	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.214286
14	52714811	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.272727
19	52925327	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.230769
19	52926494	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.105263
19	52926495	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.411765
19	52926531	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.117647
19	52926557	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.214286
19	52926824	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	52926926	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.125
19	52926988	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.111111
19	52926991	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.111111
19	52927035	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.117647
19	52939444	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
3	53253400	A->G	-	ENSG00000163931	TKT	protein_coding	Intergenic	.	.	Alu	0.181818
3	53308373	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.0869565
3	53308554	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.1
3	53308626	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.111111
6	53320057	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.130435
6	53320079	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.157895
6	53320168	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.1875
6	53323776	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.272727
16	53439818	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.176471
16	53439852	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.166667
16	53440025	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.1875
16	53440087	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.272727
16	53440090	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.153846
2	53965433	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53965489	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.117647
2	53965726	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.4
8	53981825	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.181818
8	53981826	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.363636
8	53981877	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.153846
8	53982020	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	53990087	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.230769
8	53990103	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.3125
8	53990115	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.15
8	53990643	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.08
8	53992396	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.111111
8	53993176	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.307692
8	53993200	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.217391
8	53993228	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	54035696	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.272727
4	54041045	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.2
1	54049722	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.111111
1	54050395	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.2
19	54202926	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0612245
19	54202945	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0652174
19	54202950	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.173913
19	54203577	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0588235
19	54203648	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0833333
19	54204108	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0882353
19	54204125	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0731707
19	54204151	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0487805
19	54204465	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.179487
19	54204600	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0384615
19	54204648	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0465116
19	54205886	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0697674
X	54562329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54562666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
X	54562672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	54563522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54563528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
X	54563555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
X	54563692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54563711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	54563731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
X	54563765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
X	54564588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54564617	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
X	54564658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
X	54564814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54564834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
X	54564971	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54564972	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	54979266	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.1875
14	55055845	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.178571
14	55057702	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.09375
14	55058709	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.166667
14	55058712	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.272727
14	55059377	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.125
14	55061011	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0769231
14	55061075	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0909091
14	55061136	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.1
14	55275770	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55278711	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55278741	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.214286
14	55278752	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.117647
14	55278767	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.157895
14	55278826	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55278828	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55279206	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.3
14	55279207	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.3
14	55281133	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.416667
14	55281193	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55285136	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.411765
14	55285159	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55290272	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.384615
4	55402038	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.166667
4	55412183	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.181818
5	55432217	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.352941
5	55433053	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	55433054	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.384615
5	55433291	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.214286
2	55573991	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.190476
2	55574092	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.125
12	55777653	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.125
12	55787491	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55787526	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.153846
12	55787565	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.133333
12	55787574	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.25
12	55787575	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.2
12	55787645	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.230769
8	55890004	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.285714
8	55890005	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.183673
8	55890019	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0961538
8	55890218	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.285714
8	55890232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.146341
8	55890237	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55890802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.4
8	55890840	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3125
8	55890857	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55890867	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55891157	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.230769
8	55891167	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55891231	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.388889
8	55891232	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.785714
8	55891241	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55891258	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.333333
8	55891273	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55891343	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55895557	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.269231
8	55895561	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0769231
8	55896173	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.263158
8	55896818	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0882353
8	55896819	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55896857	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.107143
8	55896881	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55897020	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0740741
8	55905265	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.190476
8	55905269	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55905281	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55905399	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55906486	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0666667
8	55906518	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0731707
8	55906537	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.375
8	55906540	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.230769
8	55906554	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15625
8	55906687	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0377358
8	55906691	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.113208
8	55906694	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.277778
8	55906695	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.12963
8	55917030	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.32
8	55917056	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55917057	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.578947
8	55917070	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55917098	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55917131	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.25
8	55917279	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55917311	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55917325	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55917333	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.52381
8	55917357	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55917384	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.233333
8	55922567	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.272727
8	55922647	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55922682	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.642857
8	55922687	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.357143
8	55922717	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
4	55962347	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.416667
4	55962361	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.333333
4	55962362	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.2
4	55962370	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.166667
4	55962374	A->G	+	ENSG00000174799	CEP135	protein_coding	Intergenic	.	.	Alu	0.210526
8	56069271	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.153846
8	56070533	A->G	-	ENSG00000008988	RPS20	protein_coding	Intergenic	.	.	Alu	0.272727
7	56098029	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
12	56312501	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intergenic	.	.	Alu	0.4
18	56607044	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.235294
18	56607052	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.133333
18	56607058	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.1875
12	56609012	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.357143
12	56609075	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.125
12	56609076	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.3125
12	56609083	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.235294
12	56609106	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.117647
18	56611241	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0689655
18	56611243	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0625
18	56611255	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0571429
18	56611265	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.121212
18	56611270	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0909091
18	56611308	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.157895
18	56612113	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.111111
18	56612117	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.111111
18	56612123	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.25
18	56612139	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.125
18	56612140	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.125
12	56685888	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.2
6	57057107	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
6	57057921	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
6	57057924	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
6	57058030	A->G	+	.	.	.	Intergenic	.	.	Alu	0.647059
4	57108670	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.133333
4	57108679	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.153846
16	57182659	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.333333
16	57182675	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.357143
16	57182684	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.105263
5	57183851	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.5
17	57457617	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.166667
3	57591666	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.272727
18	57619206	A->G	-	ENSG00000134440	NARS	protein_coding	Intergenic	.	.	Alu	0.307692
3	57677115	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.2
3	57677682	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.214286
3	57677693	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.142857
3	57893411	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.615385
17	58274599	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.333333
17	58274632	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.142857
14	58277309	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.125
14	58277374	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intergenic	.	.	Alu	0.1875
17	58340501	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.142857
17	58340507	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.137931
17	58340523	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0833333
17	58340547	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.153846
17	58340588	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.115385
17	58340761	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.230769
17	58340793	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.125
17	58340842	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.125
17	58340886	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.166667
17	58340895	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	58341360	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.285714
17	58341382	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.428571
17	58341474	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.2
17	58341681	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.133333
17	58341881	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0689655
17	58341891	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0689655
17	58342869	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.111111
17	58342883	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.333333
17	58342928	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.363636
18	58702303	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.181818
15	58921913	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	58921914	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	58922929	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.230769
15	58926717	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.166667
15	58930181	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.125
5	59024008	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.15
11	59592856	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.181818
11	59592868	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.133333
11	59592934	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.181818
11	59593017	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.125
11	59593070	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.222222
11	59593071	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.222222
15	59676312	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.333333
15	59676408	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.1875
17	59901782	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.583333
17	59901784	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.166667
17	59901835	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.214286
14	60256339	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.1875
14	60256382	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.190476
14	60272473	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0714286
8	60526692	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0952381
8	60586826	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
8	60586854	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.142857
8	60603830	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.111111
8	60603839	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.117647
2	60904281	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60904632	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0909091
2	60904633	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0869565
2	60904702	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.172414
2	60904703	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.193548
2	60909780	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.263158
11	61319703	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.8
11	61412324	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.105263
11	61412428	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.272727
11	61412454	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.428571
2	61882071	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.153846
2	61882112	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	61882550	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.210526
2	61882581	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.4
2	61882637	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.294118
2	61882706	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.125
17	61998724	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.333333
17	61998738	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.190476
17	61998798	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.111111
17	61998880	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.181818
17	61998885	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.333333
17	61999962	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
12	62330360	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0606061
12	62330851	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0909091
12	62331907	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.333333
12	62331931	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.222222
12	62331932	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.117647
12	62332018	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.181818
12	62333318	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.411765
12	62333526	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0645161
12	62333544	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0740741
12	62333569	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.1
1	62449048	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	62449654	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.434783
1	62449661	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	62449726	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	62449733	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	62449741	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.1875
1	62449765	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.5
17	62476461	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.142857
17	62476471	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.133333
17	62476531	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.4
17	62476822	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.230769
17	62476837	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.277778
17	62476847	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.388889
12	62559728	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.2
17	62589887	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.5
17	62590371	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.769231
17	62590664	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.473684
17	62590668	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.15
17	62590731	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.423077
17	62591129	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62591145	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.272727
17	62591151	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.166667
11	62738890	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.25
11	62738944	A->G	+	ENSG00000162222	TTC9C	protein_coding	Intergenic	.	.	Alu	0.166667
11	62819831	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.103448
11	62822171	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0769231
11	62822178	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.15
11	62823208	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.125
11	62823272	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.357143
11	62823273	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.375
11	62823362	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.153846
11	62823766	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0833333
8	63195941	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.111111
8	63196307	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.105263
10	63472395	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.3
15	63545701	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.315789
15	63545714	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.125
15	63545715	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.125
15	63546869	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.172414
15	63546870	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.310345
15	63547458	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.421053
15	63547475	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.176471
15	63547491	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.263158
15	63547548	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63547963	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63547979	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.117647
15	63548031	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	1
15	63548229	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.291667
15	63548230	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.708333
15	63548234	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63548283	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.2
15	63548465	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.25
15	63548812	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.178571
15	63548833	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.103448
17	63643032	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.190476
15	63675996	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.5
15	63676001	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.181818
15	63676064	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.25
15	63676097	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.307692
15	63676098	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.153846
15	63693304	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.692308
15	63693346	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.277778
15	63693408	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.125
15	63693412	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.176471
15	63739707	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63739775	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63739781	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.8
15	63803560	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.176471
15	63803561	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.111111
15	63806269	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.7
17	63840238	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.416667
17	63840417	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.190476
17	63840420	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.333333
17	63840453	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.708333
17	63840455	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.26087
15	64098611	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.2
15	64100324	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.153846
15	64100330	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64100867	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64100905	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64101070	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64109226	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64109252	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.642857
15	64109275	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.230769
17	64128031	A->G	-	ENSG00000178607	ERN1	protein_coding	Intergenic	.	.	Alu	0.133333
2	64139341	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	64139404	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.285714
2	64139568	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.230769
11	64188437	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.272727
11	64188543	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.2
11	64188544	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.181818
12	64463312	A->G	+	ENSG00000183735	TBK1	protein_coding	Intergenic	.	.	Alu	0.818182
14	64519753	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.153846
17	64650287	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
17	64650296	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.545455
11	64794916	A->G	-	ENSG00000168067	MAP4K2	protein_coding	Intergenic	.	.	Alu	0.153846
11	64794989	A->G	-	ENSG00000168067	MAP4K2	protein_coding	Intergenic	.	.	Alu	0.2
11	64795017	A->G	-	ENSG00000168067	MAP4K2	protein_coding	Intergenic	.	.	Alu	0.583333
1	64940567	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.125
1	64940590	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	64940930	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.269231
17	65016599	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.25
17	65016637	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0625
14	65067715	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.25
11	65097817	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.5
2	65127475	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.363636
2	65127487	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65127544	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.461538
2	65127643	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.315789
2	65127644	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.105263
2	65127913	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
15	65176656	A->G	-	ENSG00000166855	CLPX	protein_coding	Intergenic	.	.	Alu	0.181818
15	65719639	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3
15	65746472	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.4
15	65746538	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
11	65774681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.227273
11	65774688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
11	65774690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
15	65774937	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.125
15	65774938	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.08
15	65774940	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.16
15	65774964	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
7	65981118	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.166667
7	65981143	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.166667
7	65981155	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.210526
7	65981343	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.4
12	66193998	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0606061
12	66194002	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.285714
12	66194007	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.193548
12	66194056	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.130435
12	66194058	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.25
12	66194146	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	66194750	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	66194762	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.384615
12	66194784	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.3
12	66202765	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.08
12	66202776	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.26087
11	66629807	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.210526
11	66629814	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66629984	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66629988	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.130435
11	66635027	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.411765
11	66635045	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66635087	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.117647
11	66635088	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.117647
11	66635105	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.5
11	66635117	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66635423	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.272727
11	66635424	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.25
11	66635425	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.25
11	66635467	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.263158
11	66635494	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.190476
11	66635507	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.136364
11	66635521	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66635644	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66635650	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.444444
11	66635720	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0769231
11	66635750	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0689655
11	66635754	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.103448
11	66636127	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66636139	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66636149	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66649517	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.184211
11	66657556	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66657562	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.428571
11	66657568	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.230769
11	66657598	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.357143
11	66657603	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.266667
11	66657761	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.136364
11	66657777	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0869565
7	66741883	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.461538
7	66742719	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66742740	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.294118
7	66742741	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66742791	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66742792	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66742881	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.157895
7	66743425	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.105263
7	66743450	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66745607	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3
7	66745711	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.125
1	66936297	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.388889
1	66936302	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.176471
1	66936303	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.1875
1	66936323	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	66936345	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.153846
1	66936349	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
1	66936494	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.105263
1	66936495	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.333333
1	66936501	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.428571
1	66936507	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.35
1	66936737	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.08
1	66936739	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	66936745	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.190476
1	66936746	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.380952
1	66936751	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.190476
1	66936789	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.111111
1	66936813	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.2
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.363636
1	66936872	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.357143
1	66936878	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.294118
1	66936944	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	66937535	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.166667
15	67123070	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.153846
17	67196111	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.3125
17	67196127	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.117647
17	67200481	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.097561
17	67200494	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.0512821
11	67295589	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.272727
11	67295593	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.166667
7	67312468	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	67312489	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	67312534	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	67312595	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	67312617	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
17	67351837	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0714286
17	67351965	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.266667
17	67351969	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.307692
17	67351988	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.133333
17	67353404	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.545455
17	67353405	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.166667
17	67353432	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.533333
17	67353464	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.117647
17	67353468	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.25
17	67353508	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67353580	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.133333
17	67354755	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.133333
17	67354807	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0882353
17	67354833	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67354862	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.16129
17	67354866	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0588235
17	67354868	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.176471
17	67354878	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.142857
17	67354881	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0625
17	67354908	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0689655
17	67354927	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67354943	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.35
17	67354986	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.272727
17	67355178	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.2
17	67355230	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.136364
17	67355246	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.192308
17	67355305	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0857143
16	67567076	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.125
16	67567077	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.133333
16	67594263	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.125
16	67594299	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.214286
10	67890769	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.25
10	67890792	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.125
10	67890845	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67896633	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67896634	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
17	67898169	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.1
17	67898247	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.117647
17	67898276	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.0909091
15	68059840	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.181818
11	68093216	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.3
15	68118577	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.142857
11	68204712	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.142857
11	68204749	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.153846
11	68204754	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.166667
2	68245179	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.266667
2	68245275	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.2
2	68246142	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.181818
2	68246345	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.5
2	68246346	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.3
11	68493565	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.272727
11	68563123	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.166667
12	68613100	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0576923
12	68613151	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0612245
12	68613176	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0350877
12	68613239	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0652174
12	68613240	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0638298
12	68613348	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.107143
12	68623751	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68636934	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0571429
12	68637433	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68637454	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68637466	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68637477	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68637517	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.227273
12	68637518	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.227273
10	68760273	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.2
10	68760274	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.2
12	68822069	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.142857
10	68975926	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.166667
10	68975929	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.272727
10	68976093	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.166667
16	69571106	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.25
16	69598955	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69609948	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.133333
16	69999985	A->G	-	ENSG00000196696	AC009022.1	processed_transcript	Intergenic	.	.	Alu	0.2
16	69999990	A->G	-	ENSG00000196696	AC009022.1	processed_transcript	Intergenic	.	.	Alu	0.166667
12	70283447	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.272727
9	70304163	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.130435
10	70413445	A->G	+	ENSG00000148730	EIF4EBP2	protein_coding	Intergenic	.	.	Alu	0.181818
14	70924066	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.307692
14	70924098	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.333333
14	70924111	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.1875
14	70924177	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.105263
14	70924197	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.111111
X	71057767	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.117647
X	71057789	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.454545
X	71058506	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.272727
3	71085430	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
X	71138720	A->G	+	ENSG00000184634	MED12	protein_coding	Intergenic	.	.	Alu	0.166667
X	71411436	A->G	+	ENSG00000147133	TAF1	protein_coding	Intergenic	.	.	Alu	0.3
12	71658421	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
12	71658426	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.15
12	71658468	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.176471
12	71658508	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.230769
12	71661552	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.2
12	71661567	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.1875
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.416667
12	71661747	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
12	71775803	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.136364
12	71850530	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
12	71850546	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.454545
12	71850552	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.6
12	71850554	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.454545
12	71850827	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.105263
12	71850836	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.117647
12	71850837	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.111111
12	71850864	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.454545
12	71850866	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.272727
12	71850872	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.166667
12	71850888	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.25
12	71850889	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.166667
16	71900123	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.272727
3	72416091	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.153846
3	72416140	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.2
3	72416166	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.25
3	72416692	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.105263
3	72416696	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.157895
15	72488988	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0689655
15	72505830	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.266667
15	72505853	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.1
15	72575000	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.1
15	72575018	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	72575032	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.230769
15	72575443	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.133333
15	72575913	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.428571
15	72575943	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.111111
15	72575944	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.35
15	72763199	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.133333
15	72763250	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.375
15	72763289	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.3
15	72763414	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.166667
15	72763477	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.166667
15	72779341	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
15	72779446	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
7	72981969	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	72981981	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	72995649	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	72995656	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.352941
7	72995694	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
7	72995704	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
7	72995721	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
10	73127605	A->G	-	ENSG00000166321	NUDT13	protein_coding	Intergenic	.	.	Alu	0.3
14	73137820	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.285714
14	73137829	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.2
14	73137921	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.166667
9	73154568	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.111111
9	73154677	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.181818
10	73154745	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.5
9	73157385	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.25
4	73240905	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.2
4	73240973	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.153846
4	73240978	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.142857
4	73241029	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.105263
4	73241030	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.222222
4	73241066	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.315789
4	73241083	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.105263
7	73461839	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.941176
7	73461844	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.5
7	73461845	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.2
7	73461860	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.411765
7	73462039	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.6
7	73462137	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.1
6	73513847	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	73513848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
6	73513849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	73514135	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
6	73514814	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
6	73514880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
7	73515769	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.416667
14	73737854	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73737858	A->G	-	ENSG00000156030	ELMSAN1	protein_coding	Intergenic	.	.	Alu	0.25
10	73776941	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.230769
10	73776962	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.363636
10	73777632	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.375
10	73777649	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.142857
10	73777654	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.333333
10	73777655	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.333333
10	73777939	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.6
2	74156855	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.0571429
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.153846
7	74178465	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.25
X	74208259	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.666667
X	74266266	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74266317	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.307692
X	74266318	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.230769
X	74266333	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74266339	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3
X	74266463	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74266476	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25
X	74266484	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.416667
X	74266507	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3125
X	74277823	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.357143
X	74574883	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
15	74577212	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.181818
X	74580852	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	74763989	A->G	+	ENSG00000166439	RNF169	protein_coding	Intergenic	.	.	Alu	0.294118
15	74796119	A->G	+	ENSG00000103653	CSK	protein_coding	Intergenic	.	.	Alu	0.153846
15	74796133	A->G	+	ENSG00000103653	CSK	protein_coding	Intergenic	.	.	Alu	0.142857
15	74796139	A->G	+	ENSG00000103653	CSK	protein_coding	Intergenic	.	.	Alu	0.1875
15	74796165	A->G	+	ENSG00000103653	CSK	protein_coding	Intergenic	.	.	Alu	0.210526
14	74834116	A->G	+	ENSG00000119596	YLPM1	protein_coding	Intergenic	.	.	Alu	0.230769
10	74856780	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.230769
7	74879175	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
7	74879884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
7	74879906	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
7	74879920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	74880347	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
7	74880354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
7	74880402	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
7	74880415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
7	74880419	A->G	-	.	.	.	Intergenic	.	.	Alu	0.482759
7	74880420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
7	74880474	A->G	-	.	.	.	Intergenic	.	.	Alu	0.32
7	74880497	A->G	-	.	.	.	Intergenic	.	.	Alu	0.588235
7	74880505	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
7	74880515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	74880861	A->G	-	.	.	.	Intergenic	.	.	Alu	0.444444
7	74880881	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
7	74880883	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
7	74880908	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
7	74880999	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4375
7	74881008	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	74881331	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
7	74881486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
7	74881511	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
7	75029949	A->G	+	ENSG00000274523	RCC1L	protein_coding	Intergenic	.	.	Alu	0.3
17	75323840	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75323902	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.454545
17	75323907	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.133333
17	75324330	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75324610	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.117647
17	75324678	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.08
17	75324954	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.133333
17	75346237	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75355903	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75355904	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75355907	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.363636
17	75355954	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75355969	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.4
17	75355982	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.333333
17	75355995	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.142857
7	75368313	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.470588
7	75368462	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0909091
7	75368466	A->G	+	ENSG00000205583	STAG3L1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0909091
15	75378308	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.636364
15	75378512	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.642857
15	75378517	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.357143
15	75379170	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.230769
15	75379171	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.25
15	75379179	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.714286
7	75396231	A->G	+	ENSG00000178809	TRIM73	protein_coding	Intergenic	.	.	Alu	0.363636
6	75643666	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.111111
16	75648987	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.190476
16	75651610	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.32
15	75877111	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.08
4	76130145	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.4
4	76130178	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.181818
7	76345350	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.153846
4	77056725	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.2
7	77701037	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.181818
1	77732846	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.142857
11	77761973	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.153846
X	77763256	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.285714
X	77763282	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.461538
4	77782753	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.142857
4	77784586	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.0952381
4	77790777	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.35
4	77790786	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.272727
4	77790787	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.409091
4	77790853	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.117647
X	77901971	A->G	+	ENSG00000131174	COX7B	protein_coding	Intergenic	.	.	Alu	0.125
17	77970867	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.166667
17	77970948	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.153846
17	77976738	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.133333
9	78021205	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.153846
11	78405196	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.181818
11	78414969	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.181818
15	78888232	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.148148
15	78888307	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0606061
15	78888315	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0923077
15	78888316	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.125
15	78898243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.540541
15	78898244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.394737
15	78898313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0754717
15	78898315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.381818
15	78898322	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0363636
15	78898323	A->G	+	.	.	.	Intergenic	.	.	Alu	0.037037
15	78898339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0344828
15	78898343	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
15	78898352	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0566038
15	78898378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
15	78898379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0701754
15	78898411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
15	78898419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
15	78898420	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0363636
15	78898431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
15	78898448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0576923
15	78898489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
15	78898490	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0877193
15	78899058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0508475
15	78899115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0263158
15	78899236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
15	78899260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.381579
15	78899273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.056338
15	78899285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0972222
15	78899297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.197531
15	78899321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0375
15	78899331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
15	78899337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0533333
15	78899362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
15	78899416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
15	78899417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.366667
15	78899429	A->G	+	.	.	.	Intergenic	.	.	Alu	0.305556
15	78899431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.378378
15	78899435	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
15	78899500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294872
15	78899517	A->G	+	.	.	.	Intergenic	.	.	Alu	0.038835
15	78899549	A->G	+	.	.	.	Intergenic	.	.	Alu	0.070922
10	79094767	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.2
10	79094822	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.181818
10	79094828	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.181818
10	79094859	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.136364
15	80066688	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80092238	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80092385	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80092386	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
5	81463421	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.2
5	81463443	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.2
5	81463456	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.266667
5	81463482	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.25
5	81463643	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.25
5	81463659	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.846154
5	81463866	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	81463996	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.272727
5	81464001	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.363636
5	81464015	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.363636
5	81464019	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	81464020	A->G	-	ENSG00000145687	SSBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	81856979	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.125
17	81856991	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.2
17	82265078	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.190476
17	82481609	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.416667
17	82481610	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.416667
15	83052242	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.105263
15	83052660	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.153846
15	83052666	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.153846
15	83052841	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.4
15	83052860	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.357143
15	83052882	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.111111
15	83054269	A->G	-	ENSG00000064726	BTBD1	protein_coding	Intergenic	.	.	Alu	0.125
4	83106490	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.2
2	85006832	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.2
2	85043740	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.3
2	85609818	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.4
6	85633747	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.25
6	85633760	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.318182
6	85633777	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.185185
6	85633800	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.121212
6	85633872	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.111111
6	85633895	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.3
6	85633903	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.208333
11	85955220	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
11	86049679	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.190476
11	86049683	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.25
11	86049728	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.157895
2	86112495	A->G	+	ENSG00000132300	PTCD3	protein_coding	Intergenic	.	.	Alu	0.153846
2	86145388	A->G	+	ENSG00000132305	IMMT	protein_coding	Intergenic	.	.	Alu	0.272727
2	86473635	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.25
6	87249787	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.272727
6	87249810	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.3125
6	87249890	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.647059
6	87249978	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.176471
6	87514055	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
10	87891613	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.214286
10	87891740	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.166667
4	88016886	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.3
4	88017238	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.363636
3	88089025	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.3125
3	88089035	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.125
2	88608989	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.285714
1	88855497	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.133333
1	88866105	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.461538
1	88884165	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.125
1	88884166	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.125
15	89094633	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.357143
15	89094967	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.533333
15	89094979	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.266667
15	89095013	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.117647
15	89095014	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.111111
16	89405402	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.25
14	89598512	A->G	-	ENSG00000053254	FOXN3	protein_coding	Intergenic	.	.	Alu	0.4
1	89642647	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.210526
1	89643293	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.448276
16	89886858	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.75
16	89887113	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.157895
16	89887133	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.363636
15	90082853	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	90283414	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.08
6	90283514	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.3125
6	90283540	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.222222
7	90626682	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.153846
1	90928526	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.176471
1	90928596	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.130435
1	90928602	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.1
9	91294315	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.307692
14	91460798	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91460799	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.153846
14	91503050	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.125
14	91503164	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.08
14	91503187	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0714286
14	92090015	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.117647
14	92090028	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.142857
14	92090029	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.153846
14	92091824	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.25
14	92091846	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.545455
12	92127362	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.133333
12	92127398	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.133333
12	92127404	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.363636
10	92322147	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.230769
7	92573246	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.1
7	92573427	A->G	-	ENSG00000234545	FAM133B	protein_coding	Intergenic	.	.	Alu	0.142857
7	92812510	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	92889281	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.1875
15	92889355	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.25
15	92889365	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	92889397	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.222222
15	92889425	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.08
15	92889426	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.12
15	92890219	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0857143
15	92890756	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.105263
15	92890757	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0701754
15	92890794	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0689655
15	92890816	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.04
15	92891304	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0322581
15	92891338	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0786517
15	92893938	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.258065
15	92894748	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.521739
1	93155118	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.166667
1	93155737	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.277778
5	93981147	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.25
5	94050352	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.166667
14	94053468	A->G	-	ENSG00000089737	DDX24	protein_coding	Intergenic	.	.	Alu	0.153846
8	94942175	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.294118
8	94942201	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.235294
8	94943373	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.181818
12	95225545	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.1
12	95476469	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.181818
11	95824161	A->G	+	ENSG00000166037	CEP57	protein_coding	Intergenic	.	.	Alu	0.0869565
11	95824190	A->G	+	ENSG00000166037	CEP57	protein_coding	Intergenic	.	.	Alu	0.210526
2	96279998	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.333333
2	96280373	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.153846
2	96280422	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.166667
2	96280438	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.428571
2	96280441	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.230769
2	96280446	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.5
12	96327640	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.117647
12	96327645	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.125
12	96327710	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.1
10	96580299	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.151515
1	96726785	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	96798331	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.266667
1	96798358	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	96798361	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.15
1	96798388	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.0740741
8	97647442	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.130435
8	97647869	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.130435
8	97652996	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.272727
8	97666007	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.181818
8	97666053	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.153846
8	97667084	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.133333
8	97667103	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.142857
8	97729031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.636364
8	97729059	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
8	97729154	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
8	97729162	A->G	+	.	.	.	Intergenic	.	.	Alu	0.238095
8	97729188	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
8	97729189	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
8	97729201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
8	97729686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
8	97729727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
8	97729744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.35
8	97729752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
8	97729765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
7	97971501	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
8	98043676	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.0263158
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.573333
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.662338
12	98596782	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.6
12	98596785	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0727273
12	98596794	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.163636
12	98596830	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.23913
12	98596835	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0377358
12	98596859	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0892857
12	98596865	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0491803
12	98596868	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.09375
12	98596871	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0338983
12	98596874	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.482759
12	98596898	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.418919
12	98596974	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0699301
12	98597476	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.196581
12	98597517	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.183486
12	98597518	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.198198
12	98597553	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.222222
12	98597563	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.347368
5	98884771	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98885280	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	98918186	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.222222
5	98918202	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.235294
5	98918222	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
7	99129483	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.2
6	99405653	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.133333
6	99405662	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.470588
6	99405689	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.388889
6	99405719	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.227273
7	99490080	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.285714
7	99494873	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0645161
7	99496615	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.140351
7	99496771	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.1
7	99497303	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.227273
7	99497307	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.416667
7	99497313	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.5
7	99497339	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.28
7	99497385	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.6
7	99497452	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.454545
6	99555715	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.117647
6	99555717	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.176471
6	99556718	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.272727
6	99556845	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.2
6	99556864	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.2
1	100283856	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.0952381
3	100287986	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0606061
3	100288017	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.05
3	100288051	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.12
3	100288134	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.294118
3	100288138	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.25
3	100288141	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.125
3	100288146	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.1875
3	100288160	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.166667
7	100362642	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.25
7	100362706	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.5
7	100362711	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.4375
7	100362744	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.2
7	100363022	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.0909091
7	100363047	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.105263
1	100410065	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.357143
1	100410153	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.142857
8	100713684	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0234375
8	100716315	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.21
8	100716318	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0566038
5	100851097	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.166667
2	101274883	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0705882
2	101274898	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.158416
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.16
2	101274925	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.14
2	101274947	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0625
2	101275013	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0212766
2	101275053	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.026087
2	101275066	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.152381
2	101275068	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.038835
2	101275076	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.037037
2	101275090	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0454545
2	101275229	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0821918
2	101275256	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0645161
2	101275389	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.108108
2	101275390	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101288358	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0810811
2	101288389	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.121212
2	101288457	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0571429
X	101394277	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intergenic	.	.	Alu	0.25
X	101394494	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intergenic	.	.	Alu	0.181818
3	101586657	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.357143
3	101586673	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.235294
3	101586678	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.25
3	101586692	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.416667
3	101586699	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.142857
3	101662878	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.3
12	101775652	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.133333
10	101788221	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0769231
10	101788246	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.108108
10	101789386	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.101695
10	101789412	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.236364
10	101789415	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0576923
10	101789451	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.185185
10	101789714	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.222222
10	101789717	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.275862
10	101789723	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.5
10	101789756	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.16
10	101789757	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.132075
10	101789771	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101789782	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.608696
10	101789804	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0392157
10	101789808	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0784314
10	101789848	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.046875
10	101789857	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.192982
10	101789867	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.22807
10	101789903	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.375
10	101789917	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0701754
10	101789938	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.468085
10	101789940	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.1875
10	101789945	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.469388
10	101790349	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.1875
10	101790365	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.444444
10	101790369	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.482759
10	101790370	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0689655
10	101790397	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.111111
10	101790410	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.222222
10	101790437	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.147059
10	101790465	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0588235
10	101790470	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.117647
10	101790471	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.176471
10	101790472	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0588235
10	101790480	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.142857
10	101790495	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.175
10	101790496	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.121951
10	101790508	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0909091
10	101790544	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101790549	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.342857
10	101790550	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.314286
12	101812677	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.363636
12	101812902	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101812903	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.7
12	101812942	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.615385
12	101817370	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101817379	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.647059
12	101817400	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.117647
12	101817428	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.6
12	101817501	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.125
12	101817800	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.25
12	101824718	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.333333
12	101824727	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.307692
12	101827040	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.384615
12	101827103	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101827115	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.153846
12	101827119	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.166667
12	101827157	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.166667
12	101827438	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.25
12	101827451	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
12	101827467	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.266667
12	101827854	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.1875
12	101827880	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.222222
12	101827881	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.133333
12	101827915	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.117647
12	101827929	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.5
8	102358899	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.4
8	102358907	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.181818
8	102358913	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102358971	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.117647
8	102358972	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.133333
8	102359002	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.1875
8	102385659	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
11	102427657	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.153846
11	102427665	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.357143
4	102558720	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.466667
4	102559818	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.230769
4	102559883	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.136364
14	102612807	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.5
14	102612836	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
4	102814413	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.166667
4	102814582	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.142857
14	102843718	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.333333
14	102846534	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102846717	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.166667
10	103143528	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.214286
10	103143533	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.5
10	103143534	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.4
10	103143868	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.307692
10	103170227	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103170258	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103170730	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.235294
10	103170800	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.222222
10	103178285	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103178303	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103178304	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	103178445	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103178462	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103179219	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103179220	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103179592	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.117647
14	103682133	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.363636
14	103682249	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.411765
14	103682255	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.411765
14	103682319	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.2
14	103682325	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.6
14	103682633	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.285714
14	103682639	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.142857
12	103936432	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.117647
12	103936460	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.1
12	103936500	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.0869565
12	103936540	A->G	+	ENSG00000166598	HSP90B1	protein_coding	Intergenic	.	.	Alu	0.157895
12	104559567	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.272727
12	104559578	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.25
12	104685985	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.25
12	104686036	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
7	105007750	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.214286
7	105007910	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.166667
7	105023252	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.15
7	105023255	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105023282	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.25
7	105023574	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105023594	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.125
7	105031632	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.173913
7	105032619	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105032641	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.111111
7	105049183	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105070421	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105073325	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.15
14	105267515	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.214286
7	105340486	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.181818
7	105340506	A->G	-	ENSG00000135250	SRPK2	protein_coding	Intergenic	.	.	Alu	0.2
7	105542214	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.2
9	105711590	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.181818
9	105711673	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.333333
7	107171662	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.166667
7	107171663	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.416667
11	108017127	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.2
8	108226468	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.454545
8	108226469	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intergenic	.	.	Alu	0.363636
1	109063527	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.25
1	109063534	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.4375
1	109063609	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0625
1	109063618	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.146341
1	109063621	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0487805
1	109063715	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0625
4	109500758	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.153846
5	109799634	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.153846
5	109799711	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.25
5	109800027	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.166667
12	110448057	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.111111
12	110448078	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.117647
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.352941
12	110448092	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.3125
12	110448139	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.133333
13	110895365	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
13	110895411	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.153846
6	110896874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
6	110897119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
13	110897198	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0447761
13	110897260	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0526316
13	110897279	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0769231
13	110897361	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0357143
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.430769
1	110898256	A->G	+	ENSG00000143119	CD53	protein_coding	Intergenic	.	.	Alu	0.0833333
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.1625
13	110898665	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0740741
13	110898687	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0724638
13	110898697	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0740741
13	110898870	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
13	110898930	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.142857
13	110899955	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.207547
13	110899961	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.240741
13	110899967	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.104167
13	110899968	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0625
13	110899994	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.47619
13	110899995	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.031746
13	110900007	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.107143
13	110900009	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.403509
13	110900040	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.428571
13	110900042	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0545455
13	110900044	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.109091
10	110924812	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	110924832	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.1
10	110924845	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.1
10	110924911	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.1
10	110924912	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.233333
10	110924920	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.1
10	110924921	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.148148
10	110924924	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.173913
10	110924951	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.15
10	110924977	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.153846
12	111427153	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	111427184	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.25
9	111480365	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.125
9	111480366	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.125
9	111480422	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.272727
12	111671995	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.636364
12	111671996	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	112432747	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.3
1	112623431	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.206897
1	112623544	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	112623574	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.105263
2	112655243	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.128205
1	112663571	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	112663628	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	112663631	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.692308
1	112663705	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.454545
1	112663779	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.25
1	112663970	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	112664023	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.5
1	112664050	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.5
13	113222651	A->G	+	ENSG00000139842	CUL4A	protein_coding	Intergenic	.	.	Alu	0.2
2	113709956	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	113709979	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
1	113716452	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.181818
1	113716455	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	113716625	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	113729040	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.15
3	113729059	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.294118
3	113729616	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.307692
3	113729753	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.181818
3	113729771	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.0909091
3	113729804	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.285714
3	113729830	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.166667
2	113753419	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113753443	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113936043	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.125
2	113936068	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.142857
2	113936171	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.125
2	113949655	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.15
2	113949752	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.192308
2	113949783	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.1
3	114061787	A->G	+	ENSG00000151576	QTRT2	protein_coding	Intergenic	.	.	Alu	0.363636
3	114347160	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.181818
12	116146392	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116166181	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.235294
12	116254532	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.25
11	116922982	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	116923009	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117038632	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.6
11	117063706	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	117063740	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117063763	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.1875
11	117065833	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117072325	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117072326	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117085183	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.129032
11	117085184	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.0645161
11	117085185	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.322581
11	117085343	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.130435
11	117085345	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	117085354	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.130435
12	117182243	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.25
12	117182276	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.181818
12	118356415	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.214286
12	118356422	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118356432	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.5
12	118356437	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.416667
12	118356445	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	118356573	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118356800	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.727273
12	118356839	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.133333
12	118356840	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.285714
11	119001829	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.35
11	119001836	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.130435
10	119062876	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119062880	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119062949	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.333333
10	119077679	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.153846
10	119272495	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.2
10	119272496	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.2
6	119277571	A->G	-	ENSG00000111885	MAN1A1	protein_coding	Intergenic	.	.	Alu	0.133333
10	119588625	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.125
8	119805997	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.3125
12	120544536	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.2
12	120568086	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.166667
12	120568102	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.105263
12	120568111	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.210526
12	120568124	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.136364
12	120808162	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.181818
12	120808197	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.4
12	120863734	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.1
12	120863964	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.153846
12	120898176	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.181818
12	121335238	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.454545
12	121335262	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.583333
12	121424650	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.363636
3	121832400	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.133333
6	122469475	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.111111
12	122507296	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.181818
12	122512078	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.152174
12	122513946	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.121212
11	122729934	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
9	122817175	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.3
9	122817658	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.166667
9	122817679	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.583333
9	122817711	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.153846
9	122817712	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.230769
9	122817720	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.4
12	122869858	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.454545
12	122869859	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.636364
12	122869883	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.347826
12	122890394	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.125
12	122890486	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.107143
9	122901756	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.142857
9	122902094	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.181818
10	123001072	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.153846
10	123001144	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.125
8	123032921	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	123032923	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	123032924	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.227273
8	123032942	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.315789
8	123033000	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.6875
8	123033025	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.277778
8	123033138	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.2
8	123033527	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.375
8	123230624	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.166667
12	123422608	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.133333
X	123672263	A->G	-	ENSG00000125676	THOC2	protein_coding	Intergenic	.	.	Alu	0.2
9	124382014	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.210526
9	124382038	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.157895
9	124382042	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.1875
9	124382345	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.307692
9	124382424	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.133333
9	124382432	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.125
9	124382445	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.111111
9	124382480	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.1875
9	124382481	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.1875
9	124382483	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.5
10	124923332	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.133333
10	124923339	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.388889
10	124923408	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.25
9	125166703	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.117647
9	125166806	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.125
9	125167016	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.416667
9	125187448	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.357143
9	125187526	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.5
9	125335906	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.272727
9	125336548	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.2
9	125336559	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.166667
3	125506597	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.181818
2	127334509	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.571429
2	127334584	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.25
2	127334735	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.307692
2	127334737	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127334742	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.25
2	127334825	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127334846	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.416667
2	127334909	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.272727
2	127349432	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.136364
2	127349433	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	127352128	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127352136	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127366906	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.3
2	127368878	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.15
2	127368884	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.45
2	127383711	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.15
2	127786106	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.2
9	127790854	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	127790866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
9	127790891	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
9	127790892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
9	127790909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
9	127791000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127791015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
9	127791029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
9	127791038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.321429
9	127791048	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
9	127791443	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
9	127791444	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
9	127791461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
9	127791483	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
9	127791842	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127791897	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
9	127791926	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
9	127791963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
9	127791964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
9	127792057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
9	127792313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.192308
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	127792421	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
9	127793099	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
9	127793146	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
9	127793151	A->G	+	.	.	.	Intergenic	.	.	Alu	0.208333
9	127793152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	127793177	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
9	127793178	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
9	127793179	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
9	127793191	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127793213	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
9	127793918	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	127794000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
9	127794989	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.181818
9	127795012	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.142857
9	127795079	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0769231
9	127795118	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.111111
9	127795315	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.153846
9	127795356	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0666667
9	127795390	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.111111
9	127795482	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.2
9	127795556	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1875
9	127795615	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.5
9	127805306	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.470588
2	127805316	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.142857
9	127805324	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.470588
9	127805365	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.73913
9	127805398	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.352941
7	128553328	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	128659370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.9
3	128740287	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	128740614	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128740654	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.266667
3	128740694	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.15
3	128740816	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.214286
3	128744168	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.153846
3	129262967	A->G	+	ENSG00000181789	COPG1	protein_coding	Intergenic	.	.	Alu	0.363636
3	129262968	A->G	+	ENSG00000181789	COPG1	protein_coding	Intergenic	.	.	Alu	0.181818
8	129897887	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.272727
8	129897985	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.4
8	129898036	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.133333
8	129910885	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	129910908	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
9	129913541	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	129913948	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.285714
9	129913964	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129914016	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.266667
9	129914020	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129914026	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	129914031	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129914039	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.25
9	129914280	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.235294
9	129914288	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	129923324	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129954831	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.266667
9	129954925	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.111111
9	129955263	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129955349	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.08
9	129955350	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.08
9	129955385	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0689655
9	129955621	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.24
8	130001621	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.222222
8	130001625	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.333333
8	130001657	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.4
8	130001667	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.666667
8	130001735	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1
8	130001746	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1875
8	130001752	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0909091
8	130002349	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.375
8	130002361	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.176471
8	130002379	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.6
8	130004364	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0833333
8	130004905	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.272727
9	130017647	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.25
9	130029234	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.193548
11	130298342	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.166667
11	130298343	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.166667
9	130705018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	130705064	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	130705067	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	130705073	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
9	130705115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
9	130705134	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	130705306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
9	130705771	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
9	130705833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
9	130705834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	130705846	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	130706148	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
9	130706740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	130706801	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	130706802	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
9	130706811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
9	130706880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	130871766	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.142857
3	130871767	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.142857
3	130871977	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.2
7	130957856	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.0740741
7	130957978	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.217391
3	131008176	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.125
3	131008223	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.125
3	131008228	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.125
7	131055090	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.4
7	131056947	A->G	-	ENSG00000231721	LINC-PINT	processed_transcript	Intergenic	.	.	Alu	0.230769
2	131091873	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.0645161
5	131159928	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.139535
5	131159990	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.351852
5	131160016	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0566038
5	131162081	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0434783
5	131276338	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.190476
5	131276342	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.26087
5	131276369	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.115385
5	131276374	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0714286
7	131416921	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.125
9	131424431	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131424432	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131425246	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131425613	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131425614	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131425617	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.3
9	131426157	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.272727
9	131426182	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
2	131504096	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.588235
2	131504120	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.578947
2	131504124	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.4
2	131504231	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3125
2	131505134	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.15
2	131506503	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.466667
2	131506537	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.333333
2	131506606	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.230769
2	131506610	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.357143
2	131506651	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3
2	131506716	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.363636
9	131632020	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.6
5	131687182	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.133333
5	131687234	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.333333
5	131687243	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.235294
5	131687244	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.125
9	131710765	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.4
9	131710767	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.5
9	131711324	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.166667
9	131711331	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.545455
9	131711450	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.153846
5	131764405	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.25
5	131766165	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.28
5	131775765	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.454545
10	131902865	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.166667
10	131902886	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.153846
10	131902906	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.181818
10	131903004	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.2
10	131903233	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.25
10	131903311	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.2
10	131903382	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.166667
10	131914315	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.15
5	132917881	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
5	132917903	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132918505	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0952381
5	132918507	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.285714
5	132918562	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.176471
5	132921585	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132921643	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132921897	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.105263
5	132921905	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.190476
5	132922064	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132942899	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.363636
5	132949303	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
5	132949304	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
12	133040380	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.5
10	133294676	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.25
10	133294688	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.0714286
10	133294699	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	133294700	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.64
10	133294732	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.333333
10	133294812	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.1
8	133562338	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.222222
8	133562342	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.08
8	133562348	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.84
2	134128186	A->G	+	ENSG00000152127	MGAT5	protein_coding	Intergenic	.	.	Alu	0.0869565
5	134379590	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.4
5	134379591	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.363636
5	134380016	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0869565
5	134381507	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.142857
5	134382718	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134382719	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0714286
5	134382757	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.206897
5	134743075	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.3
5	134743808	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.2
6	135209502	A->G	+	ENSG00000118513	MYB	protein_coding	Intergenic	.	.	Alu	0.384615
7	135479641	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.25
7	135479653	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.142857
7	135479768	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.166667
7	135496883	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.5
2	135747159	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0444444
2	135747160	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.272727
2	135747280	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.4
2	135747774	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	135747776	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.142857
2	135748527	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0833333
2	135748916	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0740741
2	135748943	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.1875
3	136331983	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.8
3	136332031	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.0952381
3	136332041	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.333333
3	136657367	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.3
3	136657368	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.25
3	136715427	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.461538
3	136735241	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.266667
3	136744948	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.16
3	136744955	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.1
6	136759639	A->G	-	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.2
X	136877553	A->G	-	ENSG00000147274	RBMX	protein_coding	Intergenic	.	.	Alu	0.125
5	138363978	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.142857
5	138573296	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.105263
4	139046837	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139047243	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.176471
4	139047244	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.176471
4	139047249	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.117647
4	139047489	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.333333
7	139056522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.142857
7	139071151	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139071189	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.153846
7	139080522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.163636
7	139080554	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0675676
7	139097707	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.272727
7	139103179	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.133333
4	139170467	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.3
5	139284487	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.136364
5	139284488	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.363636
5	139284494	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.304348
5	139304280	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.285714
5	139304325	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.230769
5	139348057	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139348058	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.142857
5	139349382	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.333333
5	139349391	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.2
5	139349458	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139349521	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.25
5	139349527	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.133333
5	139349749	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139368573	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.2
7	139368659	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139368663	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139368720	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.105263
7	139370481	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.219512
7	139370532	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0491803
7	139370538	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0298507
7	139370544	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.046875
7	139370551	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.203125
7	139370557	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0632911
7	139370558	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.05
7	139370660	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.216216
7	139378383	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.047619
7	139378387	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.285714
7	139378392	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.108108
7	139378444	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.125
7	139378475	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.521739
7	139378476	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	139378480	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.217391
7	139396222	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.235294
7	139396223	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.25
7	139396406	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.166667
7	139396418	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.230769
5	139585882	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139590249	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.166667
5	140469269	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	140469451	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	140536155	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.3
5	140536187	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.818182
8	140632980	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
7	140821202	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.142857
7	140821203	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.214286
8	141172831	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.291667
8	141172836	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.304348
8	141172860	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.208333
5	141531451	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.2
5	141531453	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.3
5	142136661	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.294118
5	142136956	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	142136977	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.4
3	142323727	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.4
2	143272406	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.363636
2	143605089	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.25
2	143605092	A->G	+	ENSG00000283994	AC092652.3	sense_intronic	Intergenic	.	.	Alu	0.363636
2	143736124	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.153846
5	145757705	A->G	-	ENSG00000186314	PRELID2	protein_coding	Intergenic	.	.	Alu	0.2
1	145775147	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.142857
1	145775164	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.235294
1	145782437	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.222222
1	145794062	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.166667
5	146486983	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.285714
5	146487650	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	146941346	A->G	+	ENSG00000268043	NBPF12	protein_coding	Intergenic	.	.	Alu	0.3
1	146941347	A->G	+	ENSG00000268043	NBPF12	protein_coding	Intergenic	.	.	Alu	0.4
7	148811175	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.333333
7	148811176	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.277778
7	148838213	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.133333
7	148869443	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.4
7	149241246	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.2
6	149348708	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.153846
5	149499511	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
1	150378728	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.3
1	150571314	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0952381
1	150571318	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.1
1	150571325	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.235294
1	150571337	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
1	150612103	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150612515	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150613256	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150617894	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150617918	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150620866	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
4	150788302	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.272727
1	150930629	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.5
1	150930797	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.230769
1	150930798	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.214286
1	150930810	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.375
1	150930982	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.285714
1	150930986	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.272727
1	150930998	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.666667
1	150931021	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	150931054	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.307692
1	150931179	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	150931180	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.25
1	150931422	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.125
1	150931497	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	150931505	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.12
1	150932129	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.153846
4	151105793	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0740741
4	151105826	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.235294
4	151105956	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.111111
4	151105969	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.125
4	151107274	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151108358	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.125
4	151110630	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.125
4	151115804	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.105263
4	151117972	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
4	151130890	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.307692
4	151130928	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.4
2	151420461	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	151420465	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.35
2	151420483	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	151420526	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	151420586	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.176471
2	151420587	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.214286
2	151420638	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.333333
1	151434198	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.142857
1	151434787	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.3
1	151434993	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.111111
1	151436504	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.333333
1	151436604	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	151450444	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.5
7	151496918	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.272727
7	152309588	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152309632	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.230769
3	152329528	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.121212
3	152329542	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.16129
3	152330241	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.185185
7	152405039	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.105263
7	152405122	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1875
7	152405347	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152406741	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152414946	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152426316	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1875
7	152426330	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152426436	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.157895
7	152427081	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.235294
1	153878356	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
X	154066069	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154066320	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154081382	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.25
X	154087668	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.1875
X	154087709	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.1
X	154088528	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	154162939	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.0540541
1	154162975	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.128205
1	154174611	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.2
1	154179721	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.09375
6	154738064	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.25
5	154866793	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.588235
5	154866806	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.363636
5	154866828	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.307692
1	155554158	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.117647
1	155558778	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0666667
1	155558807	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.310345
1	155558933	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155558956	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.1
1	155559112	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.3
1	155671174	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155681529	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.243243
1	155681555	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.5
1	155681903	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155681904	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155681912	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.136364
1	155681957	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.107143
1	155684633	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.151515
1	155684636	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.264706
1	155684653	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.15625
1	155684660	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.258065
1	155684701	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155684706	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.09375
1	155684714	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.382353
1	155684724	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	155684757	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.233333
1	155684779	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	155684813	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.125
1	155684858	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.266667
1	155684859	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	155684867	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.09375
3	155850688	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.142857
3	155850702	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.125
1	155924357	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.285714
1	155924413	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.4
1	156469386	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.037037
1	156469390	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0392157
1	156469395	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.3
1	156469396	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0816327
1	156469457	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.255319
1	156469471	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0731707
1	156471271	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.179487
1	156472911	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.230769
6	156835119	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.416667
6	156835137	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.166667
7	157232445	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.125
7	157232452	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.1875
7	157232458	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.105263
7	157232530	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.157895
2	157332272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
2	157332294	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
7	157372998	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0958904
7	157373926	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.27907
7	157373953	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.233766
5	157830961	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.153846
5	157830968	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.153846
3	158689634	A->G	+	ENSG00000168827	GFM1	protein_coding	Intergenic	.	.	Alu	0.142857
7	158789417	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.173913
7	158789459	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.105263
7	158789478	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158789494	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.125
7	158789544	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.352941
7	158789612	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158789613	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.416667
7	158789614	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.363636
7	158792298	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
7	158792306	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.117647
7	158793041	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.157895
7	158799603	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.230769
7	158799873	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.222222
7	158800679	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.111111
2	159731849	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.409091
2	159731850	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.478261
2	159732779	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.266667
2	159732784	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.407407
6	159734197	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0434783
6	159734199	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0888889
6	159734203	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.214286
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.489796
6	159734602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.210526
6	159734627	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	159734640	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.171429
2	159734888	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.125
2	159734892	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.117647
6	159735628	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.416667
3	169973406	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.111111
3	169973407	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.185185
3	169973413	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.153846
3	169973483	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.1875
3	169973484	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0909091
3	169973543	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.117647
3	169973584	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.294118
2	171004101	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.538462
5	171409898	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.333333
1	171492869	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.4
1	171492932	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.117647
1	171492935	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.375
1	171492937	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.125
1	171492985	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.333333
1	171499689	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.166667
1	171499693	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
5	173081891	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.333333
4	173209949	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.214286
4	173210010	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.5
2	173931621	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.117647
2	173932329	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0625
2	173932472	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.271186
2	173932482	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.101695
2	173936163	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.105263
2	173946918	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.1
2	173946978	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0555556
1	174015741	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.615385
1	174015790	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.363636
1	174015794	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.363636
1	174016518	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.375
1	175976521	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	176070928	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.166667
2	178434492	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.461538
2	178434518	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.125
2	178434531	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.266667
2	178434558	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.125
2	178434564	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.411765
2	178435343	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.181818
2	178438759	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.153846
5	179829945	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0689655
5	179829987	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	179830041	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	179830051	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	179999189	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.153846
5	179999190	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.153846
5	179999479	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.153846
5	180033041	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.466667
5	180033046	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.133333
5	180033102	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.3
5	180033233	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.230769
5	180033268	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.333333
3	180921229	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.153846
5	181240722	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.08
5	181240779	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.176471
5	181240894	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.166667
5	181240912	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.181818
3	182830189	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.2
3	182830236	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.434783
3	182830248	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.347826
3	182841832	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.176471
3	182906492	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.230769
3	182906505	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.153846
3	182906950	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.3125
3	182910356	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.2
3	183637663	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.277778
3	183637728	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.12
3	183640862	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.117647
3	183641307	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.130435
3	183641398	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.166667
3	183655801	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.375
3	183656908	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.166667
3	183673098	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.214286
3	183675661	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.142857
4	184781676	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.2
4	184781677	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.2
1	184937322	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.272727
1	184960731	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.1875
1	184960767	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.363636
1	184960769	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.285714
3	185799276	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.25
3	185799289	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.307692
3	185799298	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.25
2	190886684	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.153846
2	190886687	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.291667
2	191075943	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.4375
2	191075948	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.4
2	191075990	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	191076014	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.636364
3	193629579	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.333333
3	193629589	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.214286
3	193629606	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.789474
3	193629609	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.428571
3	194649954	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	195417050	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	195417159	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.176471
3	195417183	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.105263
3	195417204	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.133333
3	195417731	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.461538
3	195437570	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.12
3	195437571	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.130435
3	195437622	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.125
3	195439300	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.25
3	195439308	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.3
3	195527220	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195527232	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.307692
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.285714
3	196904678	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.136364
3	196906073	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.391304
3	196906099	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
3	196906109	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.235294
3	196911437	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.157895
3	196911797	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.135135
3	196911798	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0810811
2	197286513	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
2	197286577	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.0833333
2	197286597	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.0645161
2	197468301	A->G	+	ENSG00000115520	COQ10B	protein_coding	Intergenic	.	.	Alu	0.3
2	197491909	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.105263
2	197492070	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	197492071	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.227273
2	197492074	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.28
3	197612712	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
3	197612785	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
3	197612787	A->G	-	ENSG00000214135	AC132008.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.7
2	200855388	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0428571
2	200855397	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	200855440	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0338983
2	200855752	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.140351
2	200856342	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.3125
2	200856343	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.266667
2	201134053	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.230769
2	201134089	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.363636
2	201134144	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.153846
1	201959854	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.0869565
1	201959880	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.266667
1	201959946	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.0833333
1	202136931	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.181818
1	202139316	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.105263
1	202139330	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.111111
1	202149127	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.142857
1	202149540	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.117647
2	202226935	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	202227018	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.416667
2	202288364	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.230769
2	202288399	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202288684	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.136364
2	202288695	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0769231
2	202294884	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.266667
1	202769175	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.142857
1	202769557	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.333333
1	202769586	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.3
1	202769587	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.157895
1	202948852	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.37037
1	202948863	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	203298502	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.285714
2	203300768	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.363636
2	203300769	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.545455
2	203300839	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203303279	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203303285	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203303761	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203304444	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.363636
2	203304458	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.538462
2	203304459	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.307692
2	203304891	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
1	204535803	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.28125
1	205736225	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.111111
1	205736233	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.222222
1	205740088	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	205740114	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.416667
1	205740140	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.3
1	205740362	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.105263
2	206068754	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.1
2	206070103	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.133333
2	206073587	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.136364
2	208308346	A->G	+	ENSG00000115020	PIKFYVE	protein_coding	Intergenic	.	.	Alu	0.181818
1	212345050	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.25
2	216141934	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.272727
2	216141939	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.181818
2	216141947	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.235294
2	216141957	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.375
2	218247864	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.307692
2	218573257	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.307692
1	224411830	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.111111
2	224509282	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0789474
2	224509316	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.125
2	224515831	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0444444
2	224516481	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.230769
2	224516543	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224516557	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.307692
1	225787015	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.2
1	225787044	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.9
1	225787046	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.9
1	225870093	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.181818
2	227539541	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.153846
2	227539684	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.416667
2	227539720	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.181818
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.388889
2	227539915	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.352941
2	227539936	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.133333
2	229831489	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.538462
2	229831545	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.533333
2	229831548	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.333333
2	229831569	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.25
2	229831587	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.333333
2	233071214	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.636364
2	233085312	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233131441	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.230769
2	233131442	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233131448	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233158829	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.357143
2	233158848	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.214286
2	233158858	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.133333
2	233158948	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.111111
2	233158949	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.111111
2	233159489	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.5
2	233159540	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.277778
2	233159543	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.117647
2	233159544	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.1875
2	233159545	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.125
2	233159547	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.333333
2	233362531	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.2
1	235145332	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.2
1	235239050	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235301365	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.375
1	235301414	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.466667
1	235301423	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1875
1	235301503	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	1
1	235301598	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235306314	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.391304
1	235307941	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.12
1	235307968	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.380952
1	235318757	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0571429
1	235318759	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.272727
1	235318769	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0645161
1	235318772	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.275862
1	235318773	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.533333
1	235323243	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235826738	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.6
1	235826820	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.72
1	235826849	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.136364
1	235826852	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0909091
1	235826871	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.241379
1	235826876	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0666667
1	235826896	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.125
1	235826899	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.125
1	235826915	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.228571
1	235826956	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.478261
1	235826959	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.272727
1	235826962	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.08
1	235826964	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.307692
1	235827159	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.416667
1	235827161	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.818182
1	235827172	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.176471
1	235827192	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.384615
1	235827195	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.384615
1	235827198	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.166667
1	235827245	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.833333
1	235827247	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.416667
1	235827269	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.692308
1	236600265	A->G	-	ENSG00000119285	HEATR1	protein_coding	Intergenic	.	.	Alu	0.2
2	237707312	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.5625
2	237707326	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.285714
2	237707339	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.1
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.5
2	237707358	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.333333
2	237707429	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0638298
2	237707437	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	241331059	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.214286
2	241331081	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.2
2	241331161	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.384615
1	243246321	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.133333
1	246892905	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.166667
16	1322675	A->G	+	ENSG00000103275	UBE2I	protein_coding	Intron	.	.	Alu	0.142857
16	1322692	A->G	+	ENSG00000103275	UBE2I	protein_coding	Intron	.	.	Alu	0.214286
19	11449896	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.333333
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.818182
19	11449945	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.384615
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.769231
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.538462
19	11449984	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.363636
19	11850173	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.2
19	11850203	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.272727
19	11850213	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.181818
19	11850215	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.2
19	11850766	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.190476
19	11850774	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.173913
19	11850780	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.16
19	11850810	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.08
19	11850848	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.241379
19	11850884	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.333333
19	11850910	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.411765
19	11850924	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.153846
19	11850997	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.153846
19	12003419	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.0588235
19	12003436	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.0606061
3	14944573	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.03125
3	14944591	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0666667
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.676056
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.410959
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.136986
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.439024
3	14944631	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.060241
3	14944892	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.253521
3	14944940	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0350877
3	14944945	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0892857
3	14944946	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.163636
3	14944954	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0289855
3	14944964	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0307692
9	15505024	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.105263
9	15505133	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.217391
9	15505203	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.217391
17	15530867	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intron	.	.	Alu	0.636364
17	15530939	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intron	.	.	Alu	0.2
19	16079931	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0681818
19	16079970	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.226667
19	16610529	A->G	-	ENSG00000279977	AC008764.10	TEC	Intron	.	.	Alu	0.4
19	16636430	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intron	.	.	Alu	0.25
22	19450906	A->G	-	ENSG00000070010	UFD1	protein_coding	Intron	.	.	Alu	0.1
14	20449869	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.454545
14	20449902	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.0869565
14	20449906	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.227273
14	20451378	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.5
16	22328911	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.4
16	22328991	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.2
16	22419421	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
16	22419467	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
15	24983537	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.2
15	24983545	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.133333
15	24983610	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.2
15	24983646	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.7
15	24983729	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.166667
15	24983770	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.130435
1	28509335	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0246914
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0213904
10	28523043	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.166667
10	28523223	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.181818
10	28523254	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.166667
10	28523667	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0540541
10	28523689	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0571429
10	28523698	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0555556
10	28523750	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.133333
16	28957740	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intron	.	.	Alu	0.2
1	29172355	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.136364
1	29172357	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.181818
1	29172388	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.1
1	29172389	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.181818
1	29172397	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0857143
1	29172551	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.317073
1	29173252	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.16
1	29173302	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.166667
16	31123695	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.153846
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.142857
16	31123773	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.307692
16	31123774	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.307692
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.344828
16	31183140	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.268293
16	31183189	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.129032
1	31263451	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intron	.	.	Alu	0.444444
13	32525035	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.346154
13	32525038	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.208333
1	32783055	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.15
20	35713269	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.333333
20	35713270	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.148148
19	38844801	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.137931
19	38844809	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.25
19	38844849	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.103448
19	38844902	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.0606061
19	38844917	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.282051
19	38845285	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.194444
19	38845288	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.382353
19	38845289	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.28125
19	38845319	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.375
19	38845324	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.0869565
5	38969801	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.230769
5	38969807	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.307692
5	38969862	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.3
3	39408965	A->G	+	ENSG00000168028	RPSA	protein_coding	Intron	.	.	Alu	0.166667
15	40693802	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intron	.	.	Alu	0.166667
15	41298640	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0666667
15	41298663	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0731707
15	41298740	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0416667
15	41298764	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0526316
15	41298768	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0540541
15	41298774	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.117647
15	41298775	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.181818
15	41298780	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.212121
15	41298784	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.172414
15	41298791	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0666667
15	41298807	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.1
15	41298815	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.172414
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.645161
15	41298855	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.075
15	41299136	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.375
15	41299144	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	1
15	41299194	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0740741
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.69697
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.588235
15	41299237	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.166667
15	41299245	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.166667
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.451613
15	41299259	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.147059
15	41301136	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0833333
15	41302238	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.416667
15	41305287	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0952381
15	41305325	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.133333
15	41305361	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.153846
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.235294
15	41305473	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.166667
21	41429719	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.157895
21	41429727	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.176471
17	41984401	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.25
17	41984442	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.333333
17	41984930	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.153846
17	42014703	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.166667
12	42355604	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intron	.	.	Alu	0.272727
10	42516150	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.230769
3	42602905	A->G	+	ENSG00000114857	NKTR	protein_coding	Intron	.	.	Alu	0.105263
6	42941564	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.0869565
6	42941571	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.1
6	42941579	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.181818
6	42941602	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.142857
1	44777291	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.0689655
1	44777306	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.194444
1	44777314	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.133333
1	44777345	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.102564
17	47161742	A->G	-	ENSG00000262265	AC002558.3	sense_intronic	Intron	.	.	Alu	0.272727
17	47161744	A->G	-	ENSG00000262265	AC002558.3	sense_intronic	Intron	.	.	Alu	0.363636
17	47170228	A->G	-	ENSG00000004897	CDC27	protein_coding	Intron	.	.	Alu	0.1875
17	47170232	A->G	-	ENSG00000004897	CDC27	protein_coding	Intron	.	.	Alu	0.125
17	47170270	A->G	-	ENSG00000004897	CDC27	protein_coding	Intron	.	.	Alu	0.5
19	48256394	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.142857
19	48257575	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.117647
3	50112927	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.25
3	50112956	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.146341
15	50351358	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.0833333
15	50352472	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.1
15	50352562	A->G	-	ENSG00000285410	GABPB1-IT1	sense_intronic	Intron	.	.	Alu	0.130435
15	50357447	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.133333
15	50357569	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.272727
15	50360821	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.25
15	50360993	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.222222
15	50360995	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.111111
15	50361002	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.117647
15	50361015	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.818182
15	50365729	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50365730	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.666667
15	50366761	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.166667
15	50366794	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.125
15	50366822	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50368239	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.3
14	52721545	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.172414
14	52721546	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.285714
14	52721822	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intron	.	.	Alu	0.363636
19	52927179	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.4
19	52927184	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.3
19	52927185	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.6
19	52927199	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.5
19	52927311	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.125
19	52927312	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.117647
19	52927322	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.1875
19	52927614	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.3125
19	52927639	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.294118
19	52927644	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.117647
19	52928160	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.1
2	53870465	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.3
2	53870581	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.136364
2	53870635	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.125
2	53870662	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.190476
2	53870868	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.0625
2	53870882	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.105263
2	53870886	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.269231
2	53870887	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.166667
14	55285230	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.25
14	55285295	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intron	.	.	Alu	0.166667
4	55412131	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.25
12	55792635	A->G	-	ENSG00000205323	SARNP	protein_coding	Intron	.	.	Alu	0.153846
19	57304785	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.625
19	57304790	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.125
19	57304836	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.214286
19	57304837	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.461538
19	57307395	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.117647
18	57641592	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.2
14	58258306	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intron	.	.	Alu	0.272727
14	58258319	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intron	.	.	Alu	0.2
14	58258333	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intron	.	.	Alu	0.357143
14	58293911	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0769231
14	58295680	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0322581
14	58295737	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0273973
14	58295740	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.144928
14	58295747	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.171875
17	62004993	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.157895
17	62005012	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.25
17	62005494	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.125
17	64782849	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.636364
17	64782853	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.5
17	64782862	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.384615
17	64782863	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.230769
17	64783157	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.461538
11	65440001	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0677966
11	65440055	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.125
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.425532
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.5
11	65441385	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.153846
11	65441399	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0344828
11	65441403	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0925926
11	65441418	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.156863
11	65441426	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.160714
11	65441427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.214286
11	65441448	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.177419
11	65442678	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.555556
17	67355342	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.0666667
17	67355343	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.0967742
17	67355371	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.2
10	73778867	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.166667
X	73947010	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0625
15	74026751	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.157895
15	74026790	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.117647
15	74026895	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.35
15	74027297	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.0714286
15	74027327	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.269231
15	74027346	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.107143
15	74027368	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.0952381
15	74027393	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.25
15	74027472	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.222222
15	74027510	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.413793
X	74278391	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.416667
X	74278491	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.7
7	74882628	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.818182
7	74882658	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.117647
7	74882671	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.4375
7	74882681	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.214286
7	74882693	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.153846
6	75646715	A->G	+	ENSG00000112701	SENP6	protein_coding	Intron	.	.	Alu	0.125
17	81879890	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.181818
16	88719138	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.297297
15	90075276	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.153846
15	90075318	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.2
15	90075462	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.153846
15	90075516	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.2
1	93337965	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0833333
1	93337969	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.08
1	93337979	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.125
1	93338001	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0769231
1	93338065	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0833333
11	93734902	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.179487
11	93734945	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0416667
11	93734995	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0638298
11	93735426	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.15
11	93735505	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.176471
14	94053259	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.0967742
14	94053289	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.269231
14	94053348	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.363636
2	96281304	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intron	.	.	Alu	0.166667
8	98043194	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0625
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.707317
8	98043223	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0588235
8	98043224	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.15625
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.277778
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.777778
8	98043657	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.031746
8	98043991	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.375
8	98044053	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0666667
8	98044058	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.395349
8	98044059	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.243243
8	98044071	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.388889
8	98044109	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.122449
8	98044110	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.520833
9	98075268	A->G	+	ENSG00000095380	NANS	protein_coding	Intron	.	.	Alu	0.15
12	98597599	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.178571
12	98597604	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.306667
12	98597658	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.40404
12	98597662	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.356436
12	98597676	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.611111
15	101288315	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intron	.	.	Alu	0.142857
15	101288385	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intron	.	.	Alu	0.272727
10	101787842	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.03125
10	101787851	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.105263
10	101787864	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.125
10	101787865	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.2
10	101787871	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.197368
10	101787878	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.03125
14	102038074	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.2
14	102038095	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.533333
14	102038159	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.111111
13	102607643	A->G	+	ENSG00000134900	TPP2	protein_coding	Intron	.	.	Alu	0.0625
14	103682429	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.304348
14	103682430	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.434783
14	103682551	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.230769
14	103682565	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.133333
14	103682604	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.2
14	103682605	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.133333
14	103682606	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.266667
8	108226254	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intron	.	.	Alu	0.5
8	108226261	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intron	.	.	Alu	0.5
8	108226291	A->G	-	ENSG00000104408	EIF3E	protein_coding	Intron	.	.	Alu	0.3125
4	108623264	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.285714
11	110237818	A->G	-	ENSG00000137710	RDX	protein_coding	Intron	.	.	Alu	0.0869565
10	112449496	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.333333
10	112449507	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0967742
10	112449534	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.148148
10	112449589	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.236842
10	112449594	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.121212
10	112449595	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.09375
10	112449632	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.321429
10	112449646	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.25
10	112449674	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.105263
10	112449936	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0810811
10	112449956	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0571429
10	112449964	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.108108
10	112449969	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.15
10	112449999	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0857143
10	112450004	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0625
10	112450010	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.310345
10	112450130	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.108108
10	112450131	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0555556
10	112450154	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0512821
11	117159796	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intron	.	.	Alu	0.294118
12	121332078	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.357143
12	121332081	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.133333
12	121332108	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.5
12	121332118	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.0909091
12	121332244	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.545455
12	121332883	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.166667
12	121332931	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.166667
12	121642297	A->G	+	ENSG00000276045	ORAI1	protein_coding	Intron	.	.	Alu	0.0357143
12	122875149	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.142857
12	122878848	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.272727
12	122878918	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.25
12	122878929	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.111111
7	128528047	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.2
7	128529007	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.266667
7	128529077	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.454545
9	129504142	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.416667
9	129504148	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.4
9	129504345	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.2
9	129506681	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.363636
9	129506703	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.294118
9	129506718	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.24
9	129506758	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.25
9	129506770	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.205882
9	129506786	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.193548
12	131897664	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.15
12	131897824	A->G	+	ENSG00000279283	AC131009.4	TEC	Intron	.	.	Alu	0.230769
9	137616134	A->G	-	ENSG00000283411	AL590627.2	processed_transcript	Intron	.	.	Alu	0.142857
5	139282849	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	1
5	139282894	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.2
5	139282895	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.16
5	139282900	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.115385
5	139282930	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.631579
5	139282931	A->G	+	ENSG00000120725	SIL1	protein_coding	Intron	.	.	Alu	0.578947
5	140535829	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intron	.	.	Alu	0.181818
4	151103660	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0675676
4	151103663	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0843373
7	155004523	A->G	+	ENSG00000273344	PAXIP1-AS1	lincRNA	Intron	.	.	Alu	0.0869565
1	155670905	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.111111
1	155670930	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.357143
1	155670942	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.5
1	155670943	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.388889
7	157379623	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intron	.	.	Alu	0.0408163
4	158679843	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.142857
4	158680006	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.111111
1	167640601	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.108696
1	167640611	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0681818
1	167640651	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0350877
1	167640680	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0298507
1	167641472	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0434783
1	167641490	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.05
1	167641533	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0384615
1	167641598	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.191489
1	173864077	A->G	-	ENSG00000234741	GAS5	processed_transcript	Intron	.	.	Alu	0.0769231
1	174015944	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intron	.	.	Alu	0.15
1	174015958	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intron	.	.	Alu	0.190476
2	178433749	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.0833333
2	178433750	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.08
2	178433762	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.142857
1	211358585	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.3
1	211358586	A->G	+	ENSG00000082512	TRAF5	protein_coding	Intron	.	.	Alu	0.3
2	218235833	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.031746
1	225786970	A->G	+	ENSG00000143742	SRP9	protein_coding	Intron	.	.	Alu	0.222222
2	233140670	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.166667
2	233140681	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.181818
2	233140786	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.307692
2	233140808	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.25
X	299510	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	299548	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.4
X	299626	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	299636	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.538462
X	299646	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.5
X	299663	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.307692
X	299678	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.3125
X	299702	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	300123	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	300135	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.434783
X	300140	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.08
X	300804	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	300808	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	300833	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.416667
X	300843	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	300912	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.277778
X	300964	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	300965	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.1
X	301050	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	301090	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.533333
X	301123	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	301177	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	301185	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.473684
X	301208	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	301231	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	301263	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	301279	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.25
X	301412	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	301523	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	301826	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	301887	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	301888	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	302450	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.3
17	440933	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	441992	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0347826
17	442010	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.03125
17	517794	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	769359	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
11	769367	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	769388	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.2
11	769389	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
11	769393	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.115385
11	769403	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.444444
11	769453	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	769459	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	1663536	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	1663538	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	1663560	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	1663567	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.578947
1	1663568	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	1663582	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	1663586	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.24
1	1663592	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.12
1	1663609	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	1663635	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	1663638	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	1663698	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.097561
1	1663741	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	1664099	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.269231
1	1664101	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	1664121	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	1664147	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.769231
8	1782325	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	2418312	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.5
4	2839954	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.185185
4	2839964	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.233333
4	2839971	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.257143
4	2840063	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.25
4	2840166	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	2840220	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	2906198	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.4
X	2906210	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.3
X	2906213	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.9
X	2906847	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.384615
4	2938371	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.454545
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.583333
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.3
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.833333
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	2938711	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.894737
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.315789
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.5
4	2938759	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	2938774	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.12
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.433333
2	3545017	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	3545025	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	3545047	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	3545048	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	3545056	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	3808792	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3867438	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3867567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3869544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.625
20	3869553	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3869554	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.352941
20	3869566	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3869788	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3869814	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.2
20	3869840	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.4
20	3869848	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.277778
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3870562	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.9375
20	3870961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.3
20	3870974	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.615385
20	3870981	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	3870985	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3870998	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.454545
20	3872182	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	3872206	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3872207	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.176471
20	3872211	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.222222
20	3872214	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3872276	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3872331	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3872353	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3872413	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.222222
20	3872420	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.173913
20	3873309	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3873320	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3873484	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.3
20	3873516	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3928499	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3928568	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3928884	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.8
20	3928889	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3929233	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.227273
20	3929292	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.3
20	3929317	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.615385
20	3929337	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3929377	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	3929388	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.538462
19	4653414	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	4653604	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	4653661	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.533333
19	4654525	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	4654532	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	4654542	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	4654551	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	4654585	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	4654589	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	4838728	A->G	-	ENSG00000105355	PLIN3	protein_coding	three_prime_utr	.	.	Alu	0.0380952
7	5389681	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.5
7	5389692	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	5909554	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	5909609	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	5909619	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	5909650	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	5909772	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.571429
19	5909773	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.5
1	6523323	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	8269978	A->G	+	ENSG00000178921	PFAS	protein_coding	three_prime_utr	.	.	Alu	0.2
11	8686275	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.321429
11	8686287	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	8686293	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.411765
11	8686296	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.176471
11	8686360	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	8686361	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	8686370	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.15
11	8686397	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
11	8686405	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
11	8687235	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.137931
11	8687238	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.115385
11	8687242	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.08
11	8687248	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	8687249	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	8687252	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	8687278	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.538462
11	8687279	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.5
11	8687342	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.588235
11	8687344	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.764706
16	9104214	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0222222
16	9106175	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0263158
16	9106210	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0357143
16	9106489	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0441989
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.374302
16	9106547	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0503597
16	9106548	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.304348
16	9108458	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0420168
16	9110782	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	9110783	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.092437
16	9110891	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.02
16	9111026	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	9266895	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	9266898	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	9266901	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	9268141	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.3
1	9268154	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	9268183	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.642857
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	9271114	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	9561636	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.14
19	9561684	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.137255
19	9561760	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	9562243	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.321429
19	9562267	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	9562276	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	9562303	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	9562305	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.6
19	9562313	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	9562393	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	9562431	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.296296
19	9562436	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.28
19	9562437	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.12
19	9562455	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	9563675	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.24
19	9564378	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	9647157	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.2
19	9648584	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.4
19	9650786	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	9750221	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.1
3	9836048	A->G	+	ENSG00000214021	TTLL3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	10150912	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.138462
3	10150918	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	10150924	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.555556
3	10150933	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.296296
3	10150958	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.258621
3	10151010	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	10151020	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	10151022	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	10151036	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	10151063	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	10151127	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	10151132	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	10151791	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0704225
3	10151810	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0491803
3	10151827	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	10151831	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0338983
3	10151836	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0294118
3	10151863	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0470588
3	10151882	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0480769
3	10151919	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0204082
3	10151922	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0978261
3	10151940	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.134831
3	10151941	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.117021
3	10151981	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0481928
3	10152048	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10458699	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460645	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	10460658	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	10924485	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	11145996	A->G	-	ENSG00000161888	SPC24	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11449574	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.6875
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.15625
19	11449646	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.346154
19	11449669	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	11449682	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.08
19	11449769	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	11449778	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	11449797	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	11450459	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	11450467	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.384615
16	11835320	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	11835346	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	11835350	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	11835626	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.3
8	11843971	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	11913663	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	1
19	11913665	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	11913672	A->G	+	ENSG00000198429	ZNF69	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	12079826	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	13773505	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	13773532	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.909091
19	13773911	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	13773913	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.4
19	13773925	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.55
19	13773934	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.125
12	14498927	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	14734257	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.52381
19	14734293	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	14734311	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	14734324	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	14734645	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	14734646	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	14734660	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	14734664	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.3
3	15072148	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.125
3	15072149	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	15072335	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.2
3	15072340	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.764706
3	15072378	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	15072386	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.75
3	15072979	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.318182
3	15072985	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	15700334	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	16155700	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	16155701	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	16155714	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	16155720	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	16155721	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	16552473	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	16552534	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	16645727	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.25
19	16645759	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	16645770	A->G	-	ENSG00000268790	AC008764.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	17110243	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	17110269	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	17110377	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	17186598	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.727273
17	17186612	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	17186661	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.416667
17	17189282	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.4
17	17189293	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.3
7	17344729	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0987654
7	17344730	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.614458
7	17344734	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.11236
7	17344747	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0289855
7	17344769	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0675676
7	17344771	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.115385
7	17344795	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0322581
7	17344810	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0232558
7	17344813	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.348485
7	17344816	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.283582
7	17344817	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0447761
7	17344838	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	17344890	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.471698
7	17344891	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.169811
7	17344903	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	17345061	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0512821
7	17345062	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.35
7	17345106	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.292683
7	17345139	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0322581
7	17345150	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.266667
7	17345154	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	17345155	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0843373
7	17345168	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0674157
7	17345194	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.189474
7	17345204	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.03
7	17345208	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.273585
7	17345256	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.12381
7	17345258	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.209524
7	17345263	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.229167
4	17627355	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.151515
4	17627386	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.115385
4	17627749	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.454545
4	17627754	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.6
4	17627811	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	17627817	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.285714
4	17801156	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.1
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17801196	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17801201	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.304348
4	17801204	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.5
4	17801225	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	17801244	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.375
4	17801307	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.217391
4	17801317	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	17801353	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	17801356	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17801386	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.605263
4	17801402	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	17801936	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.375
4	17801939	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	17801981	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.285714
4	17801991	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	17802039	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.551724
4	17802045	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	17802050	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.36
4	17802058	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.461538
4	17803060	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0289855
4	17803087	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.116667
4	17803097	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0655738
4	17803117	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.139535
4	17803224	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0638298
4	17803249	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0465116
4	17803297	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	17803298	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	17825712	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0344828
19	17825737	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.05
19	17826379	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0779221
19	18070869	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.1
22	18088579	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.08
22	18088632	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0625
22	18088636	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.1
22	18088655	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	18088711	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.125
22	18089806	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	18089831	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.444444
22	18089867	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	18089884	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.294118
22	18089909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.384615
22	18089962	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	18089963	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.3
22	18089964	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18364358	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	18364412	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	18364413	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	18364467	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.12
19	18364535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	18364546	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	18365396	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	18365429	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18365443	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	18365460	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18365472	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18365482	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	18365484	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	18365515	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18365524	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18365532	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18365552	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	18365605	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	18365606	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18365618	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.28125
19	18366502	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.347826
19	18366519	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.823529
19	18366527	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.642857
19	18366535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.571429
19	18366588	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18366600	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	18366610	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18366612	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	18366636	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	18366651	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.9
19	18366876	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	18366886	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.206897
19	18366892	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.178571
19	18366898	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.444444
19	18366899	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.62069
19	18366943	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	18366951	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	18367041	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18367049	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.916667
19	18367091	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.75
19	18367101	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18367105	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18367111	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18367113	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	18367958	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.12
19	18368012	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	18368048	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	18368075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	18368090	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	18487824	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	18487828	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	18487867	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.25
1	19259961	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	19260038	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.3
13	19672378	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	19672889	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	19672935	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	19680684	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.12
19	19680702	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	19681590	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.1
19	19681594	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.205128
19	19681599	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.129032
19	19681647	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	19681670	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.108108
19	19681702	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0681818
19	19682924	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	19682971	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	19682986	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	19683066	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	19683067	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	20544092	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.25
1	20651958	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0776699
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.127451
1	20651990	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0263158
1	20652097	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.036036
22	20890954	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.09375
19	21121294	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	21184141	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21184265	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	21184300	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21185530	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	21185538	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.409091
19	21185564	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.4
19	21185626	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21185635	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.125
19	21185644	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21185658	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	21185663	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.473684
19	21185751	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.15625
19	21189965	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.3
19	21190048	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21190058	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	21291622	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	21291680	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	21291699	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	21292055	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	21292286	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.3
19	21292303	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	21374317	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.232143
13	21374321	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.111111
13	21374336	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0923077
13	21374353	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.186441
13	21374356	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.293103
13	21374363	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.822581
13	21374430	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.097561
13	21374431	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.243902
13	21374437	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.357143
13	21374438	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.486486
13	21374439	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.432432
13	21374462	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0555556
13	21374485	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.266667
13	21374486	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.3
13	21374507	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.242424
13	21374508	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.40625
13	21374516	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.222222
13	21374877	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	21374889	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	21374899	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.545455
13	21374908	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.615385
13	21374916	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.461538
13	21374954	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.291667
13	21374968	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.576923
13	21375010	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0606061
13	21375012	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.46875
13	21375022	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.692308
13	21375026	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.307692
13	21375052	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.194444
13	21375058	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.2
13	21375072	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.219512
14	21460463	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.384615
14	21460473	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.692308
14	21460751	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.75
14	21460752	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.529412
14	21460885	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.833333
14	21460886	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.416667
18	21631272	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.454545
18	21632197	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	21805364	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	21805428	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.3
16	23465257	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	23465260	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.6
16	23465266	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	23465274	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	23465858	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	23465865	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	23920547	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	23920665	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	23920674	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	23920675	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.615385
19	23920687	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	23921100	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	23921125	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	23921131	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.4
19	23921149	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.3
19	23921185	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	23921189	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	23921221	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	23921238	A->G	+	ENSG00000213967	ZNF726	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	24000272	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	24000288	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	24000289	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.178571
2	24000297	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0784314
2	24000319	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	24000371	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	24000381	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	24000386	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	24000421	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	24000444	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	24000448	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	24000512	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.114286
2	24000593	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	24001241	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	24001264	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.352941
2	24001267	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	24002136	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	24002143	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	24002173	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.25
2	24002180	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	24002525	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.3
2	24002549	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24002584	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.444444
2	24002590	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	24002638	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	24002671	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	24002672	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.375
2	24002678	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.5
2	24002693	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	24004444	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
X	24077103	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0268817
X	24077133	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0351759
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0490798
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0751445
X	24077198	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0215827
X	24077203	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0307692
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.239316
X	24077252	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0232558
X	24077266	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0337838
14	24125090	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	24167346	A->G	+	ENSG00000259529	AL136295.5	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	24572551	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	24572601	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.1
22	24572605	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	24572614	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	24572640	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	24572667	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
22	24572682	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	25120868	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.1
7	25120908	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.538462
7	25120999	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	25121041	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.222222
7	25121042	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.222222
7	25121461	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	25986271	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	25986307	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	26522823	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.392857
22	26522978	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	26522979	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	26524425	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
22	26524431	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.08
22	26524445	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
22	26524450	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
22	26524455	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0697674
22	26524460	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.047619
22	26524469	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.157895
22	26524476	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.472222
22	26524498	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.681818
22	26524505	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.107143
22	26525283	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0810811
22	26525285	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.611111
22	26525338	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0625
22	26525389	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.125
22	26525391	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	26876298	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	26876321	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	26876340	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	26876344	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	26876353	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	26876354	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	27030260	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.0394737
17	27312985	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
1	28498819	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	28498858	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	28498869	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28498884	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	28498903	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.3
1	28499629	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	28499678	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.733333
1	28499749	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.2
16	28965612	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.15
16	29665079	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.155172
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.112782
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0880503
16	29665148	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0324675
16	29665184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0352113
16	29665185	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0492958
16	29665189	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0518519
16	29665194	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0465116
16	29665253	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29665256	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29665277	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	29665290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0522388
16	29665299	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29665308	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.123288
16	29665318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0516129
16	29665330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0764706
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0309278
16	29666313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0310078
16	29666351	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0287356
16	29666352	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0287356
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0657895
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.725
16	29667531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0327869
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0638298
16	29667545	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0652174
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121951
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.357143
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0789474
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29667615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.151515
16	29667618	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29667625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29667633	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.14
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.18
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.192982
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0634921
16	29667697	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0595238
16	29667704	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0208333
16	29667708	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0990099
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.16129
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0537634
16	29667782	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0229885
16	29667783	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0340909
16	29667784	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0430108
16	29667792	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0485437
16	29667796	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	29668212	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	29668220	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.102804
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.185714
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.323077
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.548387
16	29668275	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29668292	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0930233
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.264706
16	29668329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.294118
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.473684
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.184211
16	29668529	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29668539	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0857143
16	29668564	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0930233
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.452381
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.219512
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.439024
16	29668600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	29668657	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.192308
16	29668670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	29668682	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.114286
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.263158
16	29668709	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.075
16	29668710	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.35
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.243902
16	29668713	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.302326
16	29668722	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0545455
16	29668724	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	29668876	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0384615
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.194805
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.197183
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.236111
16	29668901	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0285714
16	29668909	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0615385
16	29668918	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.04
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.657895
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.277778
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.225806
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	29669005	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.15
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.115385
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29669069	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.109091
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.147541
16	29669084	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.149254
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.19403
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.238095
16	29669128	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0491803
16	29669241	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.6
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	29669384	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	29669398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.583333
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	1
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29669461	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.150943
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.641509
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.896552
16	29669601	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.461538
16	29669866	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669872	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29669881	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0789474
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.138889
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.45
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12766
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29670046	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0851064
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.195652
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0652174
16	29670091	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.075
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.097561
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0344828
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.254237
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.366667
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.09375
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29670200	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0461538
16	29670216	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.135135
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.084507
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	29670288	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.212121
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.106061
16	29670305	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.031746
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0535714
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0350877
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0465116
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.179487
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	29670391	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.107692
16	29670434	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.038961
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.186667
16	29670441	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0512821
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0789474
16	29670471	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.08
16	29670476	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29670477	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0253165
13	30457256	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.25
13	30457264	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.133333
13	30457474	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	30457483	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.263158
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.380952
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	30678499	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.214286
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	30678608	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.151515
8	30678626	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0434783
8	30678629	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0816327
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.326923
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.313725
8	30678893	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.116279
8	30678967	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0857143
8	30679027	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	30679049	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.12
8	30679066	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	30679086	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.346154
8	30679089	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.24
14	31095693	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.25
12	31282474	A->G	-	ENSG00000139146	SINHCAF	protein_coding	three_prime_utr	.	.	Alu	0.0421687
12	31282539	A->G	-	ENSG00000139146	SINHCAF	protein_coding	three_prime_utr	.	.	Alu	0.0291262
6	31672682	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.75
6	31672683	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.583333
6	31672705	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.125
6	31672706	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	31672718	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.222222
6	31673002	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.214286
6	31673010	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.714286
6	31673011	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.769231
6	31673016	A->G	+	ENSG00000263020	AL662899.2	protein_coding	three_prime_utr	.	.	Alu	0.909091
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.123077
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.140625
18	32068946	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0769231
18	32068964	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0322581
18	32068967	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0357143
18	32068976	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0952381
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.414634
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.333333
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	32069039	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.103448
18	32069041	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0508475
18	32069045	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0350877
18	32069054	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.122449
18	32069080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.047619
18	32069090	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32069109	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0697674
18	32069110	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0888889
18	32069116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32069121	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0487805
18	32069133	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0487805
18	32069140	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.25641
18	32069158	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.179487
18	32070094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0384615
18	32070115	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.025
18	32070120	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0617284
18	32070141	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.138889
18	32070144	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0985915
18	32070158	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0491803
18	32070206	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.126761
18	32070207	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0273973
18	32070221	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0363636
18	32070238	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0277778
18	32070281	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0683761
18	32070299	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0314961
18	32070300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.04
18	32070301	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0241935
18	32070362	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.03
18	32070393	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0481928
18	32070410	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.021978
18	32070418	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0212766
18	32070423	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.125
18	32070432	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0434783
18	32070433	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0701754
18	32070445	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0390625
18	32070447	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0451128
18	32070766	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.08
18	32070805	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0833333
18	32070808	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0851064
18	32070809	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0638298
18	32070870	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0392157
18	32070871	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0576923
18	32070887	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0961538
18	32070924	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.111111
18	32070965	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.205128
18	32070966	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.12987
18	32070978	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0804598
18	32070980	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0465116
18	32071161	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0526316
18	32071235	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.109091
18	32071300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.020202
18	32071334	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0615385
18	32071377	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0584416
18	32071395	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0404624
18	32071396	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0231214
18	32071399	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0568182
18	32071921	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.045977
18	32071923	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.102273
18	32071927	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.106383
18	32071929	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0594059
18	32071930	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.105769
18	32071974	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0538922
18	32071983	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.045977
18	32071989	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0463918
18	32072002	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0615385
18	32072080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0925926
18	32072090	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0545455
18	32072093	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0636364
18	32072094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.146789
18	32072103	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.034188
18	32072116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	32307673	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	32399051	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	32399063	A->G	+	ENSG00000139618	BRCA2	protein_coding	three_prime_utr	.	.	Alu	0.636364
11	32603916	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	32604141	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	32604142	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.2
11	32604154	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	32604186	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	32604223	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.2
11	32604263	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.5
11	32604290	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.130435
11	32604373	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.1
11	32604379	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.434783
1	32682517	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32682523	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	32682613	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	32682681	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	32683022	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	32683090	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.4
1	32683095	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	32683139	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	32683162	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	32683171	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	32683188	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.4
1	32683655	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.55
1	32683732	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	32683737	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	32683885	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	32683895	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	32683901	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.473684
1	32683907	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	33005238	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	33005247	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	33005250	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.25
6	33005300	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.25
6	33005309	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.416667
6	33005853	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.25
6	33005854	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.5
6	33300776	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0428571
6	33300844	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0326797
6	33301452	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0247525
6	33301511	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0523256
15	34231318	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.384615
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.5
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	34231687	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.666667
15	34231746	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.176471
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.25
15	34231765	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.130435
15	34231819	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	34231824	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	34232288	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.315789
15	34232304	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.157895
15	34232384	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0555556
15	34232392	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.117647
15	34232455	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	34232474	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.08
15	34232507	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	34470191	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.5
19	34470204	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	34470209	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	35602113	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	35602126	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.434783
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	35602220	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	35602237	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.615385
1	35602565	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	35602583	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	35602594	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	35602609	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.583333
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	35602642	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	35602675	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	35602677	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	35602680	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.514286
1	35602763	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0377358
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.403846
22	35659829	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.173913
22	35659830	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.541667
22	35659846	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.1
22	35659905	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	35659927	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.179487
22	35659950	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0943396
22	35659964	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.396552
22	35659976	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.205128
22	35661142	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.205882
22	35661159	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.516129
22	35661178	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.192308
22	35661192	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.222222
22	35661201	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.08
22	35661204	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.227273
22	35661214	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.190476
22	35661237	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.428571
22	35661278	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	35661291	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.3
22	35661307	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	35661308	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.25
1	35856712	A->G	+	ENSG00000134698	AGO4	protein_coding	three_prime_utr	.	.	Alu	0.0425532
9	36216777	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.130435
9	36216783	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.454545
9	36216800	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.315789
9	36216804	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
9	36216898	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.266667
9	36216901	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	36216953	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.421053
2	37102037	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0816327
2	37102068	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
2	37102070	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.04
2	37102071	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4
2	37102074	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0877193
2	37102092	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.04
2	37102095	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.408163
2	37102118	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	37102140	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37102164	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37102170	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0722892
2	37102171	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0361446
2	37102188	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.207317
2	37102204	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.240506
2	37102209	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.174419
2	37103423	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.277778
2	37103468	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	37103469	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.625
2	37103471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.6875
2	37103477	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	37103876	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	37103880	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37103882	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.126984
2	37103885	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0344828
2	37103894	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
2	37103895	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.196429
2	37103922	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.145455
2	37103934	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37103946	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.155556
2	37103956	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	37103973	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.25
2	37103976	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.393939
2	37104018	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	37104028	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.666667
2	37104064	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.5
2	37104078	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.4375
2	37104367	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.097561
2	37104382	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.232558
2	37104388	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37104412	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.24
2	37104417	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	37104471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	37104484	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	37104521	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
2	37104538	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0943396
2	37104593	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0958904
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.15493
2	37104603	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0422535
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.228571
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.318182
2	37202435	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37202459	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37202534	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	37202546	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	37202595	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.1
2	37204331	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37204377	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.1
2	37204378	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	37204420	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	37204443	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37204458	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37204461	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.3
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.2
5	37290221	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.434783
5	37290233	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.238095
5	37290234	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.190476
5	37290295	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	37290298	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.6
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.117647
9	37503541	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	37610196	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	37612349	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	37612372	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	37614041	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	37860922	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	37860971	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	37861008	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.16
1	37861011	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37861028	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	37861056	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	37861061	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	37861066	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	37861101	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	37861102	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	37861118	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	37861463	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.521739
1	37861469	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	37861481	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.173913
1	37861509	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	37861534	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	37861906	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	37861912	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	37861924	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	37862028	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.25
17	38849508	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	38849511	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	38849582	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.25
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.6
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.384615
17	38849615	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.172414
17	38849890	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.25
17	38849917	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	38849961	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.25
17	38849970	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	38849996	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.25
17	38850018	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	38850035	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.125
19	38869028	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.2
8	38970533	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.03125
8	38970679	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0298507
8	38970718	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	38970719	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0784314
8	38970743	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
8	38970748	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.237288
8	38971692	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0735294
8	38971701	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0235294
8	38971706	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	38971783	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0208333
8	38971800	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0631579
8	38971810	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0510204
8	38971816	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.242105
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.329787
8	38971832	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
8	38971897	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.5
8	38971934	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.138462
8	38972218	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.313253
8	38972235	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.323529
8	38972256	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	38972313	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.025974
8	38972320	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.474359
8	38972326	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0549451
8	38972328	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	38972446	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.160494
8	38972447	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.419753
8	38972459	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
8	38972958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
8	38972961	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0566038
8	38972977	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
8	38972993	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
8	38973012	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0307692
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
8	38973037	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0289855
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0547945
8	38973066	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0925926
8	38973067	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0943396
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.344828
22	39018895	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.25
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.533333
22	39018918	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.137931
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.533333
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.357143
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.916667
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.384615
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.615385
22	39020030	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.545455
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	39020058	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.136364
22	39020070	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0869565
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.653846
17	39256155	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.615385
19	39491951	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.3
19	39491952	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.4
3	40462441	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.2
3	40464070	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.3
5	40762017	A->G	-	ENSG00000132356	PRKAA1	protein_coding	three_prime_utr	.	.	Alu	0.04
5	40762189	A->G	-	ENSG00000132356	PRKAA1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
5	40825900	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	40825948	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	40829801	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	40829948	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.2
5	40830363	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	40830389	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	40830593	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	40830625	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	40830635	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.125
5	40830675	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.4
5	40831079	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.461538
5	40831153	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	40831163	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	40831173	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	40831243	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	40831251	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.538462
19	41871481	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.466667
19	41871491	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.571429
19	41872620	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.2
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.48
19	41872801	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.125
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	42057678	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.15
6	42057691	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42078100	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	42078150	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	42079616	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	42079624	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.136364
6	42079637	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.352941
6	42079649	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42079814	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	42079815	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.5
6	42080538	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42207346	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.148148
6	42207360	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	42207389	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	42532150	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0454545
15	42532171	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.047619
15	42532297	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0714286
15	42532347	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0517241
15	42543419	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.08
15	42543475	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.047619
15	42567144	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.1
15	42567145	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
15	42567151	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	42567184	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	42567724	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.1875
15	42567788	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	42569407	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	42569496	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	42569507	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	42569541	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	42569542	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	42886873	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	42886943	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42887319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	42888198	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.103448
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.409091
6	42888229	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.136364
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.15
6	42888269	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.121212
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.551724
6	42888309	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.176471
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.26087
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	42888367	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	42888372	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.565217
6	42888378	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.5
6	42888380	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42888418	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.192308
6	42888432	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.32
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.269231
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.733333
6	42889185	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	42889186	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.222222
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	42889264	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.08
6	42889283	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.08
6	42889288	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.206897
6	42889320	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	42889361	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.08
21	42909813	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.1875
21	42909823	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.722222
8	43020436	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43020505	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43020514	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	43020528	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43020529	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	43020905	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.307692
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.7
8	43021365	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43021403	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.416667
8	43021404	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43021563	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021575	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	43381597	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	43787807	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	43787828	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	43787848	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	43787871	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	43788772	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	44170070	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.363636
22	44170094	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.428571
22	44170113	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	44170221	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	44170248	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.333333
22	44170253	A->G	+	ENSG00000188677	PARVB	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	44449445	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	44450098	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.241379
6	44450138	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0789474
7	44578718	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.025641
7	44578744	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	44578754	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0273973
7	44580909	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749130	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	44749132	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.631579
3	44749145	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	44749170	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	44749199	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.4
3	44749207	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	44749224	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.642857
3	44749280	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	44749281	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.727273
3	44749411	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749412	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.454545
7	44801858	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0361446
7	44801870	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0333333
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.822785
7	44801894	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	44801912	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.045977
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.397436
7	44801990	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.6
7	44802258	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.222222
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.666667
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.45098
7	44802334	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.188679
7	44802423	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
7	44829493	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0227273
7	44835056	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0625
7	44835063	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.24
20	45077457	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.226415
20	45077460	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.119048
20	45077525	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0265487
20	45078229	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.318182
20	45078299	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.349206
20	45078306	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.515152
20	45078309	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.123077
20	45078310	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.125
20	45078323	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0714286
20	45078345	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0615385
20	45078347	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0615385
20	45078396	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0363636
20	45079028	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0619469
20	45079058	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0470588
20	45079068	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.463158
20	45079076	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0537634
20	45079095	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0843373
20	45079118	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.031746
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.174603
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.6
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.15942
20	45079149	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0735294
20	45079150	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0298507
20	45079161	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0307692
20	45079165	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.047619
20	45079173	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0677966
20	45079198	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	45079200	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0625
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.378788
20	45079204	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0461538
13	45334037	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	45334055	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	45340841	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	45340902	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.1
22	45340986	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	45341037	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	45550071	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	45550082	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.3
19	45550101	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	45680332	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	45680497	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	45680498	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.636364
3	45680550	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	45680551	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.25
3	45680555	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.8
3	45680563	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.692308
3	45680608	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.941176
3	45680761	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	45680770	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	46603594	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.115385
X	46603727	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	46603756	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	46603770	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	46603813	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	46604571	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.4
X	46604589	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	46604606	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.384615
X	46604614	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	46604628	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	46604650	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.125
X	46604651	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.125
X	46604659	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	46604698	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	46604704	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.35
X	46604705	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.3
X	46605009	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.125
X	46605023	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	46605069	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	46605108	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	46605128	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.5
X	46605899	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.151515
X	46605911	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	46605974	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.225
X	46605988	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.275
X	46606072	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
8	47977073	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	47977099	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.216216
8	47977112	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.2
8	47977113	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0731707
8	47977119	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
8	47977146	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.444444
8	47977554	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.137931
8	47977687	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	47977712	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0377358
8	47977728	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0545455
16	48352384	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	48352391	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	48352443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	48352444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	48353264	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.190476
16	48353290	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48353439	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	48353444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	48354471	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.25
16	48354472	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	48354483	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	48453467	A->G	+	ENSG00000105447	GRWD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	48453477	A->G	+	ENSG00000105447	GRWD1	protein_coding	three_prime_utr	.	.	Alu	0.125
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	48749578	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48750019	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	48750033	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	48750129	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	48750147	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.714286
3	48750200	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.2
3	48750201	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.521739
3	48750263	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	48750476	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.9
17	48864311	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	48864316	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.192308
3	49415354	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	49470748	A->G	+	ENSG00000161618	ALDH16A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	49830409	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.146341
17	49831086	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	49831106	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.208333
10	49973404	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.434783
10	49973405	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.16
10	49973420	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.28
10	49973421	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.461538
10	49973474	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.176471
10	49973494	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	50105572	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.3125
16	50105615	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.636364
16	50105681	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50326831	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50326846	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50326859	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.125
14	50326894	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	50326985	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.25
14	50326986	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50327250	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	50327317	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50327322	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.75
14	50327323	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.6
14	50327566	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	50673129	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.147059
16	50673189	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	50673193	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	50930336	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	50930339	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	50930380	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.2
12	50930406	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	50930409	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.269231
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.347826
12	50930441	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	50930458	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	50930475	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.193548
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.15625
12	50930539	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
12	50930540	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.135135
12	50930640	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.178571
12	50930661	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.107143
12	50930664	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	50930684	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.148148
12	50930701	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.1
12	50930713	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.296296
12	50930762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.372093
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.555556
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.631579
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	50931504	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	50931564	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.107143
12	50931632	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	50931636	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	50931652	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0810811
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.314286
12	50931661	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	50931666	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	50931694	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.714286
12	50931762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.125
12	50931800	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.107143
12	50931812	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	50964331	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	51913812	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.125
15	51913818	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.3125
15	51913854	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	51914115	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	52031898	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.75
19	52031934	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	52031953	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.583333
19	52031956	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.916667
19	52031958	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	52032551	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.4
1	52373010	A->G	-	ENSG00000085840	ORC1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	52373024	A->G	-	ENSG00000085840	ORC1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	52556240	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.16
19	52556598	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52691084	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
13	52691217	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52691218	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.466667
13	52691226	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	52823198	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.5
1	52823252	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	52823875	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	52823898	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	52823911	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.15
1	52824220	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.7
1	52824268	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	52824626	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.5
19	52839063	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	52839344	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	52880473	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.4
19	52880480	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.2
12	54233705	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	54237935	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	54240499	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.304348
12	54240500	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.26087
12	54240516	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.727273
X	54560993	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	54561004	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.2
X	54561017	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	54561029	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.25
X	54561032	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	55367649	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	55367658	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.242424
14	55367661	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0689655
14	55368248	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.361702
14	55368331	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	55368348	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	55368515	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	55389165	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.8125
19	55389174	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	55389280	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	55389285	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.294118
8	55825105	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
8	56068376	A->G	-	ENSG00000008988	RPS20	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	56459955	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.583333
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	56459993	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.2
4	56460096	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.461538
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.652174
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.36
4	56460149	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.2
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.291667
4	56460163	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	56460167	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	56460707	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.318182
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.695652
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.391304
4	56460751	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.25
4	56460794	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.346154
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	56460856	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	56460912	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.529412
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.941176
4	56460926	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.125
4	56460931	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.294118
19	57214494	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57214615	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	57272806	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	57272873	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
3	57626587	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.1
3	57626662	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	57627308	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	57627326	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57757017	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.208333
19	57757019	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.170213
19	57757104	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.388889
19	57757110	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.0701754
19	57807717	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.375
19	57845743	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	57845790	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57845812	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	57845860	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	57863827	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	57863828	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	57864869	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.25
19	58126888	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	58126925	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	58126926	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.259259
19	58296985	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.1
3	58318551	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	58318651	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	58318813	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	58318814	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	58318816	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	61049622	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	61049630	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	61050331	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	64322887	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	64322997	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.25
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.857143
17	64468399	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.3
17	64468418	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	64468428	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	64483743	A->G	-	ENSG00000089775	ZBTB25	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	65149774	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.3
15	65150145	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.2
11	65775920	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	65775921	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.125
11	65775963	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.294118
11	65775967	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.125
11	65776066	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	65776158	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	65776163	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	65776871	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.208333
11	65776894	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.157895
11	65776910	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.392857
11	65776911	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.407407
11	65776912	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	65776955	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.130435
11	65777019	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.133333
11	65777032	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.277778
11	65777052	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.52381
11	65777096	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.555556
11	65777104	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	66123397	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0405405
12	66123404	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.030303
7	66153254	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0697674
7	66153259	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	66153292	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0425532
7	66153308	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	66153310	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0434783
7	66153318	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.04
7	66153319	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0816327
7	66153328	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	66153345	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0444444
7	66153389	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	66153799	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0816327
7	66153805	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0638298
7	66153873	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.16129
7	66153875	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.185185
7	66153883	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	66153889	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.103448
7	66153899	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	66153914	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	66153946	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	66153973	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0465116
7	66153989	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	66153993	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.102564
7	66154010	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0697674
7	66154041	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0789474
7	66154250	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.266667
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.366667
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.2
7	66154269	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.714286
7	66154326	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.3
7	66154357	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.114286
7	66154360	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.228571
7	66154366	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.108108
7	66154379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	66649806	A->G	+	ENSG00000173933	RBM4	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	67338766	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	67339176	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.352941
17	67339204	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	67339236	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.4
17	67339275	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.642857
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.714286
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.642857
1	67409051	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	67409166	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	67409171	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	67409176	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.7
4	67469377	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.6
11	68755439	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.307692
11	68755457	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	68755587	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	68755612	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	68755614	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	68755857	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.545455
11	68755870	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.409091
11	68755871	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	68755888	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.434783
11	68755965	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	68756000	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	68756004	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	69280913	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	69280917	A->G	-	ENSG00000183323	CCDC125	protein_coding	three_prime_utr	.	.	Alu	0.5
12	69353618	A->G	+	ENSG00000090382	LYZ	protein_coding	three_prime_utr	.	.	Alu	0.0212766
16	70247992	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	70247993	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.56
16	70248678	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	70248723	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.125
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	70248832	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	70249181	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.178571
16	70249286	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.08
16	70249315	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.565217
16	70249322	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.3125
16	70249335	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.32
16	70249336	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.384615
16	70249757	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.108108
16	70249868	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.15
16	70249877	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.210526
16	70249888	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	70249912	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.533333
14	70367399	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	70372975	A->G	+	ENSG00000168872	DDX19A	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	70379918	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.2
9	71973038	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	72220329	A->G	-	ENSG00000113048	MRPS27	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	72234373	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.129032
10	72234877	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	72234879	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.227273
10	72234934	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	72234941	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.111111
10	72234949	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.210526
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	72234992	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.15
10	72235000	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	72235004	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.666667
10	72235031	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	72289708	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	72289731	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.272727
4	73057026	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.363636
4	73057379	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	73057380	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.692308
4	73057388	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.230769
10	73249034	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0789474
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.305556
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.1
10	73249115	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.103448
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.190476
10	73249149	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0408163
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.5
10	73249821	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.323529
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	73249834	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.125
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.225
10	73249963	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	73249964	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0465116
10	73250023	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.170213
10	73250026	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0625
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.25
10	73250157	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0571429
10	73250163	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.205882
6	73424190	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.217391
6	73424352	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.3
6	73424377	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.15
6	73424884	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.146341
6	73424950	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.129032
6	73424951	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0967742
6	73425031	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	73425033	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.178571
6	73425036	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	73425125	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.2
6	73425148	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.185185
6	73516513	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0707965
6	73594290	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	73594291	A->G	-	ENSG00000119899	SLC17A5	protein_coding	three_prime_utr	.	.	Alu	0.2
14	74058244	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	74059439	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	74622454	A->G	-	ENSG00000168411	RFWD3	protein_coding	three_prime_utr	.	.	Alu	0.09375
14	74735829	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	74735841	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	74735850	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	74736153	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	74736154	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	75419557	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	75419569	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
15	75419602	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.130435
15	75419632	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	75420560	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.125
15	75420562	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.125
15	75420563	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.16129
15	75420660	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	75445352	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0681818
16	75445412	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.296296
16	75445424	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.269231
16	75445426	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.28
16	75445433	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.538462
16	75445458	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.103448
16	75445496	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	75445515	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	75445523	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.384615
16	75445569	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	75445572	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.391304
16	75445576	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.521739
16	75445586	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.26087
16	75445919	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	75445921	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	75445933	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.357143
16	75445993	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.307692
16	75446009	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.5625
16	75446012	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	75446092	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.2
16	75446112	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	75446123	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	75496034	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	75496039	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.125
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.481481
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.730769
12	75496115	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.192308
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.275862
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.704545
12	75496273	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.162791
12	75496292	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
12	75496308	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	75496309	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	75496311	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.151515
12	75496317	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	75496341	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.451613
17	75889194	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	75889326	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.190476
17	75889327	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	75889858	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75890131	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.1
17	75890138	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0689655
17	75890168	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	75942997	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	75943965	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	75943986	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	75943996	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	75944013	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	75944028	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	75944039	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.3
17	75944218	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75944226	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.8
17	75945018	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	76205039	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.208333
14	76205069	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.1
14	76207066	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.25
14	76207235	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	76207236	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	77827502	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.25
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	77827514	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
X	77827518	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
X	77827534	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.173077
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	77827606	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.025641
X	77827609	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.025641
X	77827610	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.037037
X	77827619	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0632911
X	77827621	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0779221
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.144737
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	77827682	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.102041
X	77827686	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
X	77827712	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	77828020	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	77828041	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
X	77828077	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.131579
X	77828078	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	77828088	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0681818
X	77828095	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	77828117	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.152174
X	77828118	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.155556
X	77828120	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.434783
X	77828144	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.236842
X	77828147	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
X	77828148	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.227273
X	77828155	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
X	77828156	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0681818
X	77828157	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
X	77828159	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
X	77828162	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	77828173	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	77828175	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.128205
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	77828226	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.342105
X	77828331	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.540541
X	77828382	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.296296
X	77828383	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	77828394	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.558824
X	77828403	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.108108
X	77828417	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.365854
X	77828418	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.585366
X	77828442	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0612245
X	77828455	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
X	77828458	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
X	77828467	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.104167
X	77828484	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.101695
X	77828485	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	77828491	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	77828503	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0694444
X	77828504	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.173913
X	77828510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
X	77828520	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0847458
X	77828541	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.046875
X	77828545	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
11	78068661	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	78068663	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.818182
11	78068904	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	78069057	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	78069060	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	78069071	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	78069105	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	78207449	A->G	+	ENSG00000183077	AFMID	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	78642508	A->G	+	ENSG00000137959	IFI44L	protein_coding	three_prime_utr	.	.	Alu	0.2
18	79949552	A->G	-	ENSG00000122490	PQLC1	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	80627466	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0689655
5	80627470	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.294118
5	80627515	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	80627542	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	80627583	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0483871
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0491803
2	85319448	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.028169
2	85319449	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.027027
2	85611118	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	85611169	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	85611182	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	89183644	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	89183686	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.269231
1	89183696	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.263158
1	89183741	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	89183779	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	89183804	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	89183866	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	89183874	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	89183877	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	89563498	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.5
16	89564455	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.115385
7	92090467	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	92090537	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	93735605	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	93735606	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	93735630	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.521739
3	94127965	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	94127966	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.357143
5	96917759	A->G	+	ENSG00000164308	ERAP2	protein_coding	three_prime_utr	.	.	Alu	0.0363636
8	97726959	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	97726980	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0555556
8	97727244	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	97727245	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	97727253	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.242424
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.257143
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	97728683	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0606061
8	97728688	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.32
8	97728689	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.125
8	97728707	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	97728712	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	97728750	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.25
12	98548843	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.175
12	98548910	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	98548917	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.30303
12	98548918	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.09375
12	98548920	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.25
12	98549030	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	98549041	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.21875
12	98549042	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.793103
12	98549053	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.12
12	98549069	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.789474
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.5
12	98549126	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	98549225	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	98549240	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0681818
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	1
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.66
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.436364
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.357143
12	98549371	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0793651
12	98549404	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	98549423	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	98873697	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.583333
6	98873710	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.5
2	99195873	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.8
2	99195951	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	99195961	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	99195966	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.4
2	99196324	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	99196434	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	1
7	99493453	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.0518519
1	100024440	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.7
1	100024444	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.3
10	100232437	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.351351
10	100232502	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.117647
10	100232510	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.4
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.588235
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.8125
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.210526
10	100232607	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
10	100232668	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	100232677	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
10	100232885	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
10	100232926	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.145833
10	100232927	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.12766
10	100232981	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
10	100233024	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.047619
10	100233026	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.357143
10	100233036	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	100233048	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0444444
10	100233053	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.325581
10	100233091	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.119048
10	100233141	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.346154
10	100233142	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	101010167	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	101010296	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	101010300	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.25
7	101091477	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.315789
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	101091593	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.454545
7	101091607	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	101091612	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	101271386	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	101271398	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	101271399	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	101271400	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0606061
2	101271421	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	101271425	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.047619
2	101271520	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	101271532	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.137255
2	101271537	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.226415
2	101271546	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0816327
2	101271575	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	101823506	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.4
3	101823511	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	101823592	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.125
3	101823970	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	101823993	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.25
3	101824739	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	102036891	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.272727
14	102036900	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.230769
14	102036947	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.277778
14	102036976	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.285714
14	102037222	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.411765
7	102449480	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	102449758	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.103448
7	102449860	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	102449866	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.1
7	102564664	A->G	-	ENSG00000168255	POLR2J3	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	102840563	A->G	+	ENSG00000134897	BIVM	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	102927531	A->G	+	ENSG00000148842	CNNM2	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	105049680	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.2
6	109463124	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.4
6	109463125	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.3
6	109464706	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.25
6	109464711	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	109464743	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.583333
9	113292155	A->G	+	ENSG00000136875	PRPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	113292196	A->G	+	ENSG00000136875	PRPF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	115829894	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.3
12	116714628	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.636364
11	119001815	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.45
5	119394843	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.2
X	119538610	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	119538615	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	119538639	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.25
X	119538678	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.384615
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	119539275	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.357143
X	119539287	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	119539288	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0967742
X	119539306	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.225806
X	119539314	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	119539315	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	119539349	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	119539352	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.1
X	119539365	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.35
X	119539368	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	119573229	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.4
10	119573235	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.4
10	119573245	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
12	120460750	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.75
12	120460751	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	120460842	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	120460858	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.3
12	120461358	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	120461365	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	121778329	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0363636
12	121778339	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0344828
12	121778368	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0655738
12	121778369	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0350877
5	122027179	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.4
5	122027180	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	123909133	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123909274	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123909293	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.368421
X	123909305	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123910615	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.178571
X	123911535	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123911555	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123911557	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123911593	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	123911598	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123912452	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.173913
X	123912479	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.115385
X	123912482	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	1
X	123912567	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123912590	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.823529
X	123912789	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.25
X	123912792	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123912865	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	123912870	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	1
X	123912891	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123912908	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	123912922	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123912929	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123913243	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123913257	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	123913262	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.6
X	123913315	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	123913319	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	123913323	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123913420	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	126625387	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	126625390	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	126625512	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	126625554	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.25
5	126625755	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	126625763	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	126625771	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	126625802	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126625862	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.4
5	126625885	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.125
5	126625931	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.461538
5	126625957	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	126626118	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.230769
5	126626392	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126626394	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126626616	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.6
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.3
7	128307926	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131162200	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.097561
5	131162202	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.075
5	131162260	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	131201175	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201193	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131201199	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201694	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.727273
5	131201710	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.384615
5	131201838	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
12	132721316	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.16
12	132721318	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.777778
12	132721328	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.125
12	132721344	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	132721348	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.2
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.68
12	132721375	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.107143
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	132721439	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.107143
12	132721441	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.137931
12	132721448	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	132721467	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.411765
12	132721535	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.545455
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.35
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.15
12	132721689	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.16
12	132721706	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	132721753	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.823529
12	132721754	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.3125
12	132721763	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.25
12	132721769	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.666667
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.714286
12	132721879	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.217391
12	132722331	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	132722351	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.1
12	132722352	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.2
12	132722416	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.2
12	132722417	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	132722430	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	132722487	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	132769969	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.125
12	132769978	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	132770000	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	134152638	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.25
5	134402494	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	134402580	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	134960828	A->G	+	ENSG00000132570	PCBD2	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	139045647	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.177778
4	139045723	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.326087
3	141946785	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.631579
3	141946786	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.368421
3	141946787	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	141947585	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	141947588	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	141948285	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	141948307	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.692308
3	141948848	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.391304
3	141948915	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.318182
3	141948991	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	141949015	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	141950034	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141950039	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	141950079	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.277778
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.35
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	145745225	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	145745244	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.208333
1	145745275	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.125
1	145745297	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	145745311	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.1
1	145745322	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0571429
1	145745324	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	145745346	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	145745370	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	145745384	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	145745386	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.206897
1	145745394	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	145745550	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.4
1	145746104	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	145746126	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.2
1	145746144	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	145746149	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.25
1	145746164	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	145921998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.181818
1	145922061	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.153846
1	145922075	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.307692
1	145922076	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.461538
1	145922969	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.111111
1	145922994	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.266667
1	145923202	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.2
6	149448035	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	149448443	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.3
6	149448486	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.3
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	149591241	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.103448
6	149591242	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	149725204	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.3
6	149725213	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150308577	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150308583	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	150621411	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.28
1	150621412	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.25
1	150621414	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.291667
1	150621549	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	150731137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	150731288	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.3
1	150731311	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	150731336	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	150731362	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	150731374	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.769231
1	150731384	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	150731936	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.259259
1	150731937	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.407407
1	150731942	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.2
1	150732072	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150732092	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	150732109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	150732111	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150732137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	150732157	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.518519
1	150732160	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.296296
1	150732177	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	150732178	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	150732184	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150732736	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.075
1	150732740	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0819672
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.109091
1	150732767	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.205882
1	150732797	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	150732802	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.114286
1	150732810	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0543478
1	150732829	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0322581
1	150732856	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0246914
1	150732860	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0394737
5	151268414	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	151874503	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	151874594	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	151874631	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	154011217	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0235294
1	155883428	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	155883455	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	155883460	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	156540416	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.714286
3	156540438	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	156540441	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.258065
3	156540447	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.5625
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.6875
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.210526
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.5
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.727273
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.283333
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.315789
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.297297
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	156541552	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.225
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.209302
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.5625
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.556962
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
7	156970221	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.3
7	156971419	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.4
7	156971572	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	156971573	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.230769
6	159679824	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
6	159679850	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	159679899	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0246914
6	159679900	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.025974
6	159680691	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0549451
6	159680701	A->G	-	ENSG00000112096	SOD2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	160996554	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0930233
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.365854
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.292683
1	160996603	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.102564
1	160996628	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.594595
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.2
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.125
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.238095
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.25
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	160998148	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.205882
1	168249256	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0350877
1	168249284	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0731707
1	168249305	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0681818
1	168251169	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.107143
1	168251192	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
1	168251237	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	168549861	A->G	-	ENSG00000120137	PANK3	protein_coding	three_prime_utr	.	.	Alu	0.0447761
5	168549888	A->G	-	ENSG00000120137	PANK3	protein_coding	three_prime_utr	.	.	Alu	0.0892857
1	179073557	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	179397783	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
3	179397833	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.08
3	179397834	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	179397839	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.6
3	179397847	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.277778
3	179397895	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	179398008	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.2
3	179398024	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	179399245	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	179399255	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	179399260	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.1
3	179399340	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.25
3	179399478	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	183491274	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	183672740	A->G	+	ENSG00000114796	KLHL24	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	184791989	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	184791995	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	184792045	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	184792054	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.2
1	184792095	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.05
1	184792137	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.114286
1	184792140	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	184792178	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.209302
1	184792186	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	184792216	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	184793326	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.046875
1	184793338	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.132353
1	184793339	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0441176
1	184793353	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.18
1	184793364	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
1	184793388	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	184793390	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.204082
1	184793447	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	184793456	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	184793493	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.06
1	184793499	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.04
1	184793542	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.162162
3	194641711	A->G	-	ENSG00000041802	LSG1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	196352409	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	196352418	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.216216
3	196352422	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	196352434	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	196352512	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.4
3	196352518	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	196352519	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	196352541	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.5625
3	196352735	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	196352737	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.433333
3	196352749	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.692308
3	196352750	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.576923
3	196352809	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	196352812	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.6
3	196352820	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.692308
3	196352826	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	196352835	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	196352843	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.173913
3	196353657	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.125
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.228571
3	196353680	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.125
3	196353682	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.115385
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.26087
3	196353751	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	196353753	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	196353759	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	200977594	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.125
2	200977600	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.4
2	200977668	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.533333
2	200977678	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	200977685	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	200977694	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	200977703	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	200977711	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.25
2	200977751	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	200977756	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.4375
2	200977769	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	200977838	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	200977846	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.75
2	200978572	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.3
2	201164002	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.1
2	201164004	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	201164010	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	201164011	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	201164088	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	201164105	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	201164109	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	201164144	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.294118
2	201218007	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.352941
2	201218013	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.25
2	201218039	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	201218334	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	201218428	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	201219050	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	201219149	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	201219150	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.15625
2	201219176	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	201219195	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	201286715	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0392157
2	201286733	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.328358
2	201287278	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.188235
2	201287300	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0641026
2	201287339	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.275
2	201287347	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0857143
2	201287355	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.243243
2	201287363	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.121951
2	201287380	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	201287383	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.444444
2	201287385	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.2
2	203297313	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	203297314	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	203297791	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	203297792	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	203297973	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	206122801	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	207754653	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.8
2	207754677	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	207754690	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	207754697	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.9
2	207755282	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	216501757	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.05
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.27907
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.382353
2	216501798	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	216501804	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	216501811	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	216501847	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.433333
2	216501867	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.217391
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	216501903	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	216502070	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.3
2	216502071	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	216502072	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	216502080	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	216502098	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.3
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	216502236	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.194444
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.282051
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	216502255	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0454545
1	225786972	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.228571
1	225983639	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.141304
1	225983640	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.021978
1	225983661	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0243902
1	225983676	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.121019
1	225983677	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.106383
1	225983699	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.305785
1	225984164	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.138211
1	225984621	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.176471
MT	14233	A->G	+	ENSG00000198695	MT-ND6	protein_coding	CDS	.	.	Alu	1
1	149887304	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.652174
1	149887567	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.159091
1	149887568	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.0697674
1	149887575	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.511111
1	149887584	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.765957
1	149887592	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.410256
2	3517549	A->G	-	ENSG00000182551	ADI1	protein_coding	five_prime_utr	.	.	Alu	0.352941
4	2480072	A->G	+	ENSG00000063978	RNF4	protein_coding	five_prime_utr	.	.	Alu	0.142857
6	4021331	A->G	+	ENSG00000112739	PRPF4B	protein_coding	five_prime_utr	.	.	Alu	0.537313
11	2981703	A->G	-	ENSG00000205531	NAP1L4	protein_coding	five_prime_utr	.	.	Alu	0.2
11	2981705	A->G	-	ENSG00000205531	NAP1L4	protein_coding	five_prime_utr	.	.	Alu	0.25
12	6943922	A->G	+	ENSG00000111678	C12orf57	protein_coding	five_prime_utr	.	.	Alu	0.40625
17	2635428	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	five_prime_utr	.	.	Alu	0.111111
17	5418018	A->G	-	ENSG00000108559	NUP88	protein_coding	five_prime_utr	.	.	Alu	0.09375
19	5911734	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.333333
19	5911761	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.111111
19	5911781	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.111111
19	5911810	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.4
19	5911820	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.384615
19	5912438	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.272727
19	5912444	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.4
19	5912870	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.25
19	5912871	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.166667
19	5912889	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.166667
19	5913837	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.235294
1	16594651	A->G	-	ENSG00000219481	NBPF1	protein_coding	five_prime_utr	.	.	Alu	0.357143
1	20774286	A->G	-	ENSG00000127483	HP1BP3	protein_coding	five_prime_utr	.	.	Alu	0.0869565
1	23959998	A->G	+	ENSG00000189266	PNRC2	protein_coding	five_prime_utr	.	.	Alu	0.140845
1	28893384	A->G	+	ENSG00000159023	EPB41	protein_coding	five_prime_utr	.	.	Alu	0.136364
1	54044637	A->G	-	ENSG00000116209	TMEM59	protein_coding	five_prime_utr	.	.	Alu	0.277778
1	54047726	A->G	-	ENSG00000116209	TMEM59	protein_coding	five_prime_utr	.	.	Alu	0.142857
1	93346086	A->G	+	ENSG00000117505	DR1	protein_coding	five_prime_utr	.	.	Alu	0.474359
3	49087022	A->G	-	ENSG00000198218	QRICH1	protein_coding	five_prime_utr	.	.	Alu	0.25
3	49406739	A->G	-	ENSG00000067560	RHOA	protein_coding	five_prime_utr	.	.	Alu	0.0588235
4	26383929	A->G	+	ENSG00000168214	RBPJ	protein_coding	five_prime_utr	.	.	Alu	0.2
7	44574651	A->G	-	ENSG00000136271	DDX56	protein_coding	five_prime_utr	.	.	Alu	0.2
7	44574684	A->G	-	ENSG00000136271	DDX56	protein_coding	five_prime_utr	.	.	Alu	0.166667
7	44574698	A->G	-	ENSG00000136271	DDX56	protein_coding	five_prime_utr	.	.	Alu	0.2
7	66740160	A->G	-	ENSG00000272831	AC027644.3	antisense	five_prime_utr	.	.	Alu	0.0869565
8	38247188	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.176471
8	38247232	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.111111
8	38247233	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.421053
8	38247234	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.444444
8	38247287	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.2
8	38247380	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.0689655
8	38247381	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.222222
8	38247382	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.62963
8	38247394	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.633333
8	38247403	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.0645161
10	72220096	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.181818
10	72220129	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.157895
11	62840113	A->G	-	ENSG00000133316	WDR74	protein_coding	five_prime_utr	.	.	Alu	0.117647
11	62840139	A->G	-	ENSG00000133316	WDR74	protein_coding	five_prime_utr	.	.	Alu	0.2
11	62840140	A->G	-	ENSG00000133316	WDR74	protein_coding	five_prime_utr	.	.	Alu	0.2
11	66260979	A->G	+	ENSG00000174996	KLC2	protein_coding	five_prime_utr	.	.	Alu	0.166667
11	66261000	A->G	+	ENSG00000174996	KLC2	protein_coding	five_prime_utr	.	.	Alu	0.153846
11	72049449	A->G	-	ENSG00000137497	NUMA1	protein_coding	five_prime_utr	.	.	Alu	0.2
12	28199031	A->G	+	ENSG00000123106	CCDC91	protein_coding	five_prime_utr	.	.	Alu	0.153846
12	28199040	A->G	+	ENSG00000123106	CCDC91	protein_coding	five_prime_utr	.	.	Alu	0.153846
12	28199043	A->G	+	ENSG00000123106	CCDC91	protein_coding	five_prime_utr	.	.	Alu	0.166667
12	57487699	A->G	+	ENSG00000123329	ARHGAP9	protein_coding	five_prime_utr	.	.	Alu	0.181818
12	57487702	A->G	+	ENSG00000123329	ARHGAP9	protein_coding	five_prime_utr	.	.	Alu	0.181818
12	68624525	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.142857
12	68624695	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.12
12	70290731	A->G	+	ENSG00000111596	CNOT2	protein_coding	five_prime_utr	.	.	Alu	0.272727
14	21264917	A->G	-	ENSG00000092199	HNRNPC	protein_coding	five_prime_utr	.	.	Alu	0.030303
14	22913787	A->G	-	ENSG00000100461	RBM23	protein_coding	five_prime_utr	.	.	Alu	0.105263
14	64499479	A->G	-	ENSG00000089775	ZBTB25	protein_coding	five_prime_utr	.	.	Alu	0.0740741
14	64499514	A->G	-	ENSG00000089775	ZBTB25	protein_coding	five_prime_utr	.	.	Alu	0.1
14	73139314	A->G	+	ENSG00000080815	PSEN1	protein_coding	five_prime_utr	.	.	Alu	0.166667
15	60394599	A->G	-	ENSG00000182718	ANXA2	protein_coding	five_prime_utr	.	.	Alu	0.105263
15	60394616	A->G	-	ENSG00000182718	ANXA2	protein_coding	five_prime_utr	.	.	Alu	0.105263
15	60396177	A->G	-	ENSG00000182718	ANXA2	protein_coding	five_prime_utr	.	.	Alu	0.0714286
15	75443618	A->G	-	ENSG00000169375	SIN3A	protein_coding	five_prime_utr	.	.	Alu	0.08
15	80060736	A->G	+	ENSG00000086666	ZFAND6	protein_coding	five_prime_utr	.	.	Alu	0.153846
16	18900010	A->G	-	ENSG00000157106	SMG1	protein_coding	five_prime_utr	.	.	Alu	0.290909
17	28672802	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.214286
17	28672803	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.133333
17	28672805	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.333333
17	62508436	A->G	+	ENSG00000146872	TLK2	protein_coding	five_prime_utr	.	.	Alu	0.166667
19	11946877	A->G	+	ENSG00000267274	AC008770.3	sense_overlapping	five_prime_utr	.	.	Alu	0.6
19	11946880	A->G	+	ENSG00000267274	AC008770.3	sense_overlapping	five_prime_utr	.	.	Alu	0.1875
19	12164649	A->G	+	ENSG00000196646	ZNF136	protein_coding	five_prime_utr	.	.	Alu	0.285714
19	14415951	A->G	-	ENSG00000123136	DDX39A	protein_coding	five_prime_utr	.	.	Alu	0.2
19	14415961	A->G	-	ENSG00000123136	DDX39A	protein_coding	five_prime_utr	.	.	Alu	0.153846
19	16077972	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.172414
19	16077975	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0731707
19	16077984	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0344828
19	16078004	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0224719
19	16078034	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0430108
19	16078035	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0537634
19	16078047	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0384615
19	16078049	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0291262
19	16078050	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0291262
19	16081465	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.166667
19	16081470	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.097561
19	16081535	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0526316
19	18560217	A->G	+	ENSG00000268030	AC005253.1	antisense	five_prime_utr	.	.	Alu	0.153846
19	18560255	A->G	+	ENSG00000268030	AC005253.1	antisense	five_prime_utr	.	.	Alu	0.142857
19	18560269	A->G	+	ENSG00000268030	AC005253.1	antisense	five_prime_utr	.	.	Alu	0.133333
19	21306892	A->G	-	ENSG00000182141	ZNF708	protein_coding	five_prime_utr	.	.	Alu	0.181818
19	37324887	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.384615
19	37324914	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.363636
19	38894245	A->G	-	ENSG00000068903	SIRT2	protein_coding	five_prime_utr	.	.	Alu	0.2
19	45855469	A->G	-	ENSG00000125755	SYMPK	protein_coding	five_prime_utr	.	.	Alu	0.428571
19	45861962	A->G	-	ENSG00000125755	SYMPK	protein_coding	five_prime_utr	.	.	Alu	0.222222
19	45861976	A->G	-	ENSG00000125755	SYMPK	protein_coding	five_prime_utr	.	.	Alu	0.230769
19	52617468	A->G	-	ENSG00000167766	ZNF83	protein_coding	five_prime_utr	.	.	Alu	0.0869565
19	52617474	A->G	-	ENSG00000167766	ZNF83	protein_coding	five_prime_utr	.	.	Alu	0.0952381
19	52617487	A->G	-	ENSG00000167766	ZNF83	protein_coding	five_prime_utr	.	.	Alu	0.227273
19	52617488	A->G	-	ENSG00000167766	ZNF83	protein_coding	five_prime_utr	.	.	Alu	0.0869565
19	52918836	A->G	-	ENSG00000213793	ZNF888	protein_coding	five_prime_utr	.	.	Alu	0.166667
19	53075467	A->G	-	ENSG00000170949	ZNF160	protein_coding	five_prime_utr	.	.	Alu	0.428571
20	35782364	A->G	+	ENSG00000025293	PHF20	protein_coding	five_prime_utr	.	.	Alu	0.125
20	49179171	A->G	-	ENSG00000124214	STAU1	protein_coding	five_prime_utr	.	.	Alu	0.2
21	29026656	A->G	+	ENSG00000156256	USP16	protein_coding	five_prime_utr	.	.	Alu	0.103448
21	37410667	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.0689655
22	45321676	A->G	+	ENSG00000100376	FAM118A	protein_coding	five_prime_utr	.	.	Alu	0.2
1	144440236	A->G	-	ENSG00000266338	NBPF15	protein_coding	five_prime_utr	.	.	Alu	0.818182
1	154987675	A->G	+	ENSG00000160688	FLAD1	protein_coding	five_prime_utr	.	.	Alu	0.2
1	179877324	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	five_prime_utr	.	.	Alu	0.0224719
2	131107726	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	five_prime_utr	.	.	Alu	0.2
2	232724690	A->G	+	ENSG00000204120	GIGYF2	protein_coding	five_prime_utr	.	.	Alu	0.125
3	136867493	A->G	+	ENSG00000158092	NCK1	protein_coding	five_prime_utr	.	.	Alu	0.2
3	139385189	A->G	-	ENSG00000184432	COPB2	protein_coding	five_prime_utr	.	.	Alu	0.153846
3	179325099	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0483871
5	163437663	A->G	+	ENSG00000113328	CCNG1	protein_coding	five_prime_utr	.	.	Alu	0.416667
8	100300537	A->G	-	ENSG00000034677	RNF19A	protein_coding	five_prime_utr	.	.	Alu	0.117647
8	100300619	A->G	-	ENSG00000034677	RNF19A	protein_coding	five_prime_utr	.	.	Alu	0.0740741
8	100935031	A->G	-	ENSG00000164924	YWHAZ	protein_coding	five_prime_utr	.	.	Alu	0.0652174
8	143590693	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.142857
8	143590715	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.166667
9	120928173	A->G	-	ENSG00000056558	TRAF1	protein_coding	five_prime_utr	.	.	Alu	0.363636
12	103967882	A->G	+	ENSG00000139372	TDG	protein_coding	five_prime_utr	.	.	Alu	0.230769
12	103967929	A->G	+	ENSG00000139372	TDG	protein_coding	five_prime_utr	.	.	Alu	0.153846
14	102809112	A->G	+	ENSG00000131323	TRAF3	protein_coding	five_prime_utr	.	.	Alu	0.166667
GL000219.1	58514	A->G	-	ENSG00000273748	AL592183.1	protein_coding	Intergenic	.	.	Alu	0.857143
GL000219.1	68233	A->G	-	ENSG00000273748	AL592183.1	protein_coding	Intergenic	.	.	Alu	0.8
GL000219.1	77855	A->G	-	ENSG00000273748	AL592183.1	protein_coding	Intergenic	.	.	Alu	0.769231
GL000219.1	85486	A->G	-	.	.	.	Intergenic	.	.	Alu	0.73913
GL000219.1	92466	A->G	-	.	.	.	Intergenic	.	.	Alu	1
GL000219.1	99159	A->G	-	.	.	.	Intergenic	.	.	Alu	0.954545
GL000219.1	99260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.888889
KI270713.1	21693	A->G	-	.	.	.	Intergenic	.	.	Alu	0.392157
MT	146	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	16126	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	16519	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	263	A->G	+	.	.	.	Intergenic	.	.	Alu	1
MT	73	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	101004418	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	101004419	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
X	101004423	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
X	101004432	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	101394454	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intergenic	.	.	Alu	0.181818
X	107715578	A->G	-	ENSG00000157514	TSC22D3	protein_coding	Intergenic	.	.	Alu	0.0517241
X	1187334	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
X	1187439	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	119624815	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.2
X	119624905	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.4
X	119624906	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.2
X	119624912	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.333333
X	119653835	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.214286
X	119673136	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.214286
X	119673160	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.142857
X	119673345	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.142857
X	119673610	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
X	119681845	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.142857
X	119872763	A->G	+	ENSG00000125356	NDUFA1	protein_coding	Intergenic	.	.	Alu	0.181818
X	119942243	A->G	-	ENSG00000101882	NKAP	protein_coding	Intergenic	.	.	Alu	0.428571
X	123672254	A->G	-	ENSG00000125676	THOC2	protein_coding	Intergenic	.	.	Alu	0.2
X	123685996	A->G	-	ENSG00000125676	THOC2	protein_coding	Intergenic	.	.	Alu	0.166667
X	123868166	A->G	+	ENSG00000101966	XIAP	protein_coding	Intergenic	.	.	Alu	0.181818
X	123868171	A->G	+	ENSG00000101966	XIAP	protein_coding	Intergenic	.	.	Alu	0.181818
X	123965732	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.214286
X	123965943	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.2
X	123974372	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.2
X	123982472	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.142857
X	123982492	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.117647
X	123992814	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.2
X	124067527	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.2
X	124067539	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.2
X	124351978	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.333333
X	124351990	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.277778
X	124352012	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.222222
X	124352962	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.166667
X	124353022	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.235294
X	124360023	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.25
X	124360369	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.545455
X	124360376	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.153846
X	124360392	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.25
X	124360400	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.333333
X	124364694	A->G	+	ENSG00000101972	STAG2	protein_coding	Intergenic	.	.	Alu	0.2
X	132210621	A->G	-	ENSG00000123728	RAP2C	protein_coding	Intergenic	.	.	Alu	0.25
X	132210622	A->G	-	ENSG00000123728	RAP2C	protein_coding	Intergenic	.	.	Alu	0.454545
X	1384121	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1429392	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.2
X	1440768	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.3
X	15329841	A->G	-	ENSG00000165195	PIGA	protein_coding	Intergenic	.	.	Alu	0.285714
X	154065551	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.142857
X	154067409	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.153846
X	154067410	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.214286
X	154067460	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.363636
X	154067464	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
X	154070030	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.214286
X	154071556	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.0909091
X	154071578	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.105263
X	154071598	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
X	154071605	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.133333
X	154072614	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.3
X	154072705	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.136364
X	154072857	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
X	154073623	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.3
X	154079307	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.25
X	154079621	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.133333
X	154079720	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.384615
X	154079730	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.230769
X	154079828	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.25
X	154079943	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.454545
X	154080527	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.1875
X	154080528	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.1875
X	154080559	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.176471
X	154081628	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154083936	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.142857
X	154083941	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.181818
X	154083943	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154083957	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.9
X	154083974	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.785714
X	154085176	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.153846
X	154085242	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154085256	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.230769
X	154085316	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.08
X	154085318	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.153846
X	154085418	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.166667
X	154085434	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154088475	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.0555556
X	154088477	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.0526316
X	154088490	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.0714286
X	154088513	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.46875
X	154088523	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.416667
X	154088533	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.25
X	154088553	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.333333
X	154089067	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.142857
X	154089086	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.3125
X	154089110	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.571429
X	154089116	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.142857
X	154089123	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.461538
X	154555449	A->G	+	ENSG00000269335	IKBKG	protein_coding	Intergenic	.	.	Alu	0.25
X	155286414	A->G	-	ENSG00000155962	CLIC2	protein_coding	Intergenic	.	.	Alu	1
X	15837012	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.454545
X	15837013	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.166667
X	15837035	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.214286
X	15837036	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.214286
X	15838951	A->G	-	ENSG00000182287	AP1S2	protein_coding	Intergenic	.	.	Alu	0.166667
X	16721344	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.583333
X	16736760	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.357143
X	16737130	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.190476
X	16737132	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.142857
X	16737196	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.368421
X	16737264	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.166667
X	16737300	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.133333
X	16737337	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.214286
X	16738145	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.466667
X	16738190	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.117647
X	16738229	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.153846
X	16855187	A->G	-	ENSG00000102054	RBBP7	protein_coding	Intergenic	.	.	Alu	0.181818
X	20246071	A->G	-	ENSG00000177189	RPS6KA3	protein_coding	Intergenic	.	.	Alu	0.142857
X	23702011	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	23702016	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
X	23702059	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	23702065	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
X	24075837	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.117647
X	24075951	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.166667
X	24075956	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.25
X	24076405	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.111111
X	24180617	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.285714
X	24180621	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.416667
X	24180622	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.25
X	24186516	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.181818
X	2635801	A->G	+	ENSG00000223773	CD99P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	1
X	2660251	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	2660439	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	2664607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	2666024	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	2693204	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.473684
X	2694544	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.333333
X	2694591	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2694630	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.363636
X	2694633	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.4
X	2695299	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.230769
X	2695335	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.235294
X	2695370	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2695476	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.166667
X	2695479	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.333333
X	2695489	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.416667
X	2695791	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.3
X	2696041	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.625
X	2697482	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.444444
X	2712579	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.6
X	2715939	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.285714
X	2718041	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	1
X	2743811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.625
X	2744637	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0967742
X	38310162	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.133333
X	38310228	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.6
X	38310230	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.4
X	38324913	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.7
X	38324926	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.25
X	41175507	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.166667
X	44887140	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.117647
X	44889224	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.181818
X	44889280	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.181818
X	44897592	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.214286
X	44897604	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.181818
X	44897758	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44901307	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44911805	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.388889
X	44911843	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.272727
X	44938093	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.272727
X	44938234	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.111111
X	44940306	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44949284	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	44949314	A->G	+	ENSG00000147050	KDM6A	protein_coding	Intergenic	.	.	Alu	0.2
X	53400147	A->G	-	ENSG00000072501	SMC1A	protein_coding	Intergenic	.	.	Alu	0.333333
X	53652577	A->G	-	ENSG00000086758	HUWE1	protein_coding	Intergenic	.	.	Alu	1
X	53664211	A->G	-	ENSG00000086758	HUWE1	protein_coding	Intergenic	.	.	Alu	0.2
X	53664215	A->G	-	ENSG00000086758	HUWE1	protein_coding	Intergenic	.	.	Alu	0.2
X	53665888	A->G	-	ENSG00000086758	HUWE1	protein_coding	Intergenic	.	.	Alu	0.190476
X	54561640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
X	54562718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54563297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.736842
X	54563341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.208333
X	54563379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54564969	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54565603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
X	65685695	A->G	+	ENSG00000147065	MSN	protein_coding	Intergenic	.	.	Alu	0.133333
X	65685696	A->G	+	ENSG00000147065	MSN	protein_coding	Intergenic	.	.	Alu	0.2
X	65687201	A->G	+	ENSG00000147065	MSN	protein_coding	Intergenic	.	.	Alu	0.7
X	65694010	A->G	+	ENSG00000147065	MSN	protein_coding	Intergenic	.	.	Alu	0.214286
X	65718636	A->G	+	ENSG00000147065	MSN	protein_coding	Intergenic	.	.	Alu	0.142857
X	71293298	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.238095
X	71293373	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.25
X	71293812	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.25
X	71293873	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.346154
X	71408546	A->G	+	ENSG00000147133	TAF1	protein_coding	Intergenic	.	.	Alu	0.4
X	71408558	A->G	+	ENSG00000147133	TAF1	protein_coding	Intergenic	.	.	Alu	0.2
X	71551544	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.181818
X	71551553	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.142857
X	71552175	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.2
X	71552482	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.333333
X	71552488	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.142857
X	71552489	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.25
X	71552653	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.125
X	71552659	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.111111
X	71553356	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.133333
X	71564942	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.117647
X	71564978	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.142857
X	71564981	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.125
X	71564996	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.5
X	71564997	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.1875
X	71564998	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.1875
X	71565001	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.1875
X	71565320	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.3125
X	71565344	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.166667
X	71565366	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.172414
X	71565405	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.0645161
X	71565411	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.142857
X	71565490	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.111111
X	71565491	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.388889
X	71565492	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.166667
X	71565497	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.35
X	71565729	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.3
X	71565810	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.166667
X	71566952	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.272727
X	71566956	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.272727
X	71566977	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.428571
X	71567092	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.16
X	73952155	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.2
X	73954088	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.2
X	73954106	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74248107	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74252471	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74260853	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74260888	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.235294
X	74260912	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.125
X	74260916	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.111111
X	74261613	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.111111
X	74261720	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.347826
X	74261758	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.105263
X	74261766	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.555556
X	74263597	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74264391	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.117647
X	74264403	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1875
X	74264404	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.25
X	74264405	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3125
X	74264449	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74264452	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.363636
X	74264466	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3
X	74264509	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74265339	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74274999	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.461538
X	74275000	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.461538
X	74275058	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.461538
X	74275358	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74275366	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.176471
X	74275460	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.133333
X	74275462	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.4
X	74275463	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.357143
X	74275468	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.538462
X	74275469	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.142857
X	74275970	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1
X	74275976	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0952381
X	74276026	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.15
X	74276042	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.166667
X	74276068	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74276074	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.125
X	74276084	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.133333
X	74276120	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.6
X	74276149	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.5
X	74276427	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1
X	74276500	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.3
X	74276556	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.4
X	74276557	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.4
X	74276561	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.181818
X	74276633	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.227273
X	74277032	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1
X	74277044	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.190476
X	74277067	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.230769
X	74277085	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.0833333
X	74277106	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.4
X	74277123	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.2
X	74277166	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.571429
X	74277179	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.111111
X	74277190	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.1875
X	74277191	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.333333
X	74277196	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.176471
X	74277209	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.384615
X	74277933	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.5
X	74576692	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	74579576	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	74579626	A->G	-	.	.	.	Intergenic	.	.	Alu	0.388889
X	74579652	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	74579656	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	74580595	A->G	-	.	.	.	Intergenic	.	.	Alu	0.538462
X	74580707	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
X	74580719	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	74580734	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	74580738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	74580784	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	74580792	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
X	74580798	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	74580842	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	74580877	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	74580960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.466667
X	77761320	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.1
X	77762057	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.142857
X	77763212	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.333333
X	77763217	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.105263
X	77763911	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.2
X	77763992	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.166667
X	77764014	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.117647
X	77764078	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.642857
X	77764083	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.866667
X	77764100	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.166667
X	77764108	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.166667
X	77769839	A->G	-	ENSG00000085224	ATRX	protein_coding	Intergenic	.	.	Alu	0.153846
X	77849753	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.2
X	77849763	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.333333
X	77849815	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.142857
X	77849836	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.230769
X	77849844	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.6
X	77852748	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.1
X	77852751	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.15
X	77852801	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.166667
X	77867441	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.2
X	77874087	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.636364
X	77874123	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.25
X	77901956	A->G	+	ENSG00000131174	COX7B	protein_coding	Intergenic	.	.	Alu	0.153846
X	77904627	A->G	+	ENSG00000131174	COX7B	protein_coding	Intergenic	.	.	Alu	0.454545
X	78115534	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.166667
X	78120685	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.166667
X	78120705	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.166667
X	78120730	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.142857
X	9472286	A->G	+	ENSG00000101849	TBL1X	protein_coding	Intergenic	.	.	Alu	0.2
X	9472296	A->G	+	ENSG00000101849	TBL1X	protein_coding	Intergenic	.	.	Alu	0.2
Y	12681053	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intergenic	.	.	Alu	0.272727
Y	12907849	A->G	+	ENSG00000067048	DDX3Y	protein_coding	Intergenic	.	.	Alu	0.105263
Y	13373993	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.5
Y	13374001	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.833333
Y	13374002	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.333333
Y	13378583	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.9
Y	13384452	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.2
Y	13384500	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.461538
Y	13391928	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.357143
Y	13393113	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.363636
Y	13395531	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.235294
Y	13467077	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.181818
Y	13467512	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.117647
Y	13467588	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.117647
Y	13467620	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.153846
Y	13467657	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.230769
Y	13467689	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.285714
Y	13468441	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.133333
Y	13468555	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.470588
Y	13468558	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.157895
Y	13468568	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.117647
Y	13468617	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.136364
Y	13468633	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.125
Y	13469373	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.153846
Y	13469460	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.133333
Y	13469465	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.266667
Y	13469481	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.153846
Y	13474069	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.190476
Y	13475835	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.222222
Y	13475855	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.222222
Y	13475861	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.105263
Y	13475904	A->G	-	ENSG00000183878	UTY	protein_coding	Intergenic	.	.	Alu	0.222222
Y	19052306	A->G	-	ENSG00000176728	TTTY14	lincRNA	Intergenic	.	.	Alu	0.3
Y	19728523	A->G	-	ENSG00000012817	KDM5D	protein_coding	Intergenic	.	.	Alu	0.2
Y	19738119	A->G	-	ENSG00000012817	KDM5D	protein_coding	Intergenic	.	.	Alu	0.545455
Y	19739251	A->G	-	ENSG00000012817	KDM5D	protein_coding	Intergenic	.	.	Alu	0.4
Y	2937227	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.181818
Y	2937381	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.133333
Y	2938647	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.2
Y	2938812	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.25
Y	2950312	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.2
Y	2952058	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.2
Y	2974281	A->G	+	ENSG00000067646	ZFY	protein_coding	Intergenic	.	.	Alu	0.166667
Y	7276909	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
Y	7276939	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
Y	7278100	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
Y	7278216	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
Y	7330571	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
Y	7330615	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
Y	7330616	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.285714
Y	7333307	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
4	74155	A->G	+	ENSG00000272602	ZNF595	protein_coding	Intergenic	.	.	Alu	0.181818
4	128248	A->G	+	ENSG00000250312	ZNF718	protein_coding	Intergenic	.	.	Alu	1
4	134190	A->G	+	ENSG00000250312	ZNF718	protein_coding	Intergenic	.	.	Alu	0.2
4	134418	A->G	+	ENSG00000250312	ZNF718	protein_coding	Intergenic	.	.	Alu	0.2
4	134420	A->G	+	ENSG00000250312	ZNF718	protein_coding	Intergenic	.	.	Alu	0.2
4	467741	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.25
4	469914	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
4	470011	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
4	470054	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.272727
4	470057	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
4	470059	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
4	470833	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
4	470948	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.235294
4	512454	A->G	+	ENSG00000174227	PIGG	protein_coding	Intergenic	.	.	Alu	0.4
4	775665	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.181818
4	777549	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.117647
4	777683	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.181818
4	777798	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.2
4	778739	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.142857
4	778740	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.285714
4	778780	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.294118
4	778787	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.125
4	779047	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.2
4	779071	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.153846
4	779076	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.25
4	856775	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.181818
4	856854	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.25
4	895181	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.6
4	908539	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.166667
4	908565	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.181818
4	908676	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.153846
4	908702	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.428571
4	909013	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.214286
4	909017	A->G	-	ENSG00000178950	GAK	protein_coding	Intergenic	.	.	Alu	0.142857
5	226354	A->G	+	ENSG00000073578	SDHA	protein_coding	Intergenic	.	.	Alu	0.285714
5	226360	A->G	+	ENSG00000073578	SDHA	protein_coding	Intergenic	.	.	Alu	0.166667
5	226424	A->G	+	ENSG00000073578	SDHA	protein_coding	Intergenic	.	.	Alu	0.25
10	143870	A->G	+	ENSG00000015171	ZMYND11	protein_coding	Intergenic	.	.	Alu	0.2
10	144450	A->G	+	ENSG00000015171	ZMYND11	protein_coding	Intergenic	.	.	Alu	0.230769
10	144484	A->G	+	ENSG00000015171	ZMYND11	protein_coding	Intergenic	.	.	Alu	0.166667
10	916571	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.214286
10	916608	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.266667
10	916612	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.428571
10	916613	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.142857
10	916656	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.2
10	916799	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.2
10	916872	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.133333
10	916873	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.333333
10	916917	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.3
10	916973	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.272727
10	916977	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.666667
10	929415	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.133333
10	929432	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.705882
10	929473	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.375
10	929538	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.0625
10	999127	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.105263
10	999149	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.571429
10	999188	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.368421
10	999212	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.434783
10	999258	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.214286
10	999703	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.272727
10	999709	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.2
10	999710	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.3
10	999730	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.2
10	999911	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.25
10	999949	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.142857
10	999950	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.117647
11	508590	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
11	508602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
11	508607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
11	508609	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
11	582334	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.333333
11	582345	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.117647
11	582365	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.157895
11	582382	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.1
11	582394	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.277778
11	586199	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.105263
11	588457	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.214286
11	588460	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	595202	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.636364
11	595203	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	651884	A->G	-	ENSG00000177030	DEAF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	750346	A->G	+	ENSG00000177156	TALDO1	protein_coding	Intergenic	.	.	Alu	0.181818
11	927245	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.3
11	934360	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.153846
11	934377	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.133333
11	947058	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.2
11	947110	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.153846
11	947898	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.3
11	961233	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.217391
11	961236	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.259259
11	961349	A->G	+	ENSG00000183020	AP2A2	protein_coding	Intergenic	.	.	Alu	0.15
12	378306	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.153846
12	378396	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.136364
12	378428	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.130435
12	378442	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.16
12	378511	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.12
12	378538	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0689655
12	378714	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.111111
12	380050	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0666667
12	380071	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.111111
12	380102	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.08
12	380105	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0714286
12	380146	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.172414
12	380156	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0645161
12	380162	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0740741
12	380168	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.259259
12	380185	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0714286
12	380206	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.142857
12	380471	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.121212
12	380486	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0967742
12	380524	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0952381
12	380562	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.08
12	380568	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.125
12	380595	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0952381
12	380647	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.266667
12	380660	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.12
12	380709	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.333333
12	380959	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.277778
12	380962	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.25
12	381100	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.166667
12	381132	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.181818
12	381836	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.1
12	381899	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.238095
12	381918	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.115385
12	382010	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.333333
12	382019	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.133333
12	382380	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.111111
12	382416	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.142857
12	383317	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.4
12	383339	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.25
12	383346	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.0869565
12	383353	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.142857
12	383454	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.117647
12	383476	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.315789
12	383512	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.15
12	762770	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.133333
12	762778	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.133333
12	762803	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.153846
12	762992	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.333333
12	763328	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.230769
12	763356	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.230769
12	763393	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.428571
12	765366	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.1875
12	765385	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.1
12	765425	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	765441	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.117647
12	874076	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.5
12	874081	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.428571
12	874095	A->G	+	ENSG00000060237	WNK1	protein_coding	Intergenic	.	.	Alu	0.294118
16	195466	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.4
16	195683	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	210235	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.3
16	211165	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	212835	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.1
16	212854	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.125
16	212856	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.117647
16	212893	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.277778
16	212932	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.142857
16	212987	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.166667
16	213006	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.25
16	213007	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.125
16	213060	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.3
16	213485	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	213497	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.272727
16	213511	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	213915	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	213919	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.133333
16	214665	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.117647
16	214667	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.25
16	214691	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.142857
16	214707	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	214949	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	214975	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.142857
16	215061	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	215283	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.176471
16	215298	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.333333
16	215525	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.4
16	215708	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.130435
16	215717	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.208333
16	215759	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.0689655
16	215767	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.206897
16	215787	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.192308
16	215874	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.12
16	216670	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.142857
16	216865	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.0869565
16	216889	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.136364
16	216968	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.4
16	217048	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.266667
16	217503	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	217624	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.181818
16	217794	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.142857
16	217795	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.142857
16	217836	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.142857
16	217917	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.190476
16	217981	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.153846
16	217989	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.3
16	218149	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.105263
16	218477	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.0833333
16	218478	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.0869565
16	218555	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
16	218715	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.466667
16	218719	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.125
16	218861	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.125
16	219828	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.1875
16	222420	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.133333
16	222435	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.142857
16	222506	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.25
16	222508	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.333333
16	222516	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.470588
16	222576	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.133333
16	222582	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.166667
16	225244	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.117647
16	225258	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.272727
16	344242	A->G	-	ENSG00000103126	AXIN1	protein_coding	Intergenic	.	.	Alu	0.7
16	348603	A->G	-	ENSG00000103126	AXIN1	protein_coding	Intergenic	.	.	Alu	0.181818
16	349035	A->G	-	ENSG00000103126	AXIN1	protein_coding	Intergenic	.	.	Alu	0.181818
16	349841	A->G	-	ENSG00000103126	AXIN1	protein_coding	Intergenic	.	.	Alu	0.272727
16	351019	A->G	-	ENSG00000103126	AXIN1	protein_coding	Intergenic	.	.	Alu	0.111111
16	436744	A->G	+	ENSG00000090565	RAB11FIP3	protein_coding	Intergenic	.	.	Alu	0.2
16	498619	A->G	+	ENSG00000090565	RAB11FIP3	protein_coding	Intergenic	.	.	Alu	0.2
16	587990	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	397561	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
18	184747	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.148148
18	185429	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.166667
18	185756	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.125
18	185795	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.0952381
18	185823	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.15
18	186198	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.166667
18	205624	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.125
18	205654	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.307692
18	205660	A->G	+	ENSG00000101557	USP14	protein_coding	Intergenic	.	.	Alu	0.428571
18	230819	A->G	-	ENSG00000079134	THOC1	protein_coding	Intergenic	.	.	Alu	0.2
18	231016	A->G	-	ENSG00000079134	THOC1	protein_coding	Intergenic	.	.	Alu	0.272727
18	237281	A->G	-	ENSG00000079134	THOC1	protein_coding	Intergenic	.	.	Alu	0.142857
18	239365	A->G	-	ENSG00000079134	THOC1	protein_coding	Intergenic	.	.	Alu	0.142857
18	710623	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.272727
18	710627	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.2
18	792268	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.2
18	793475	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.125
18	793536	A->G	-	ENSG00000176105	YES1	protein_coding	Intergenic	.	.	Alu	0.2
19	809033	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.133333
19	809109	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.125
19	809706	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.2
19	810228	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.153846
19	931123	A->G	+	ENSG00000116017	ARID3A	protein_coding	Intergenic	.	.	Alu	0.181818
19	932065	A->G	+	ENSG00000116017	ARID3A	protein_coding	Intergenic	.	.	Alu	0.166667
19	932073	A->G	+	ENSG00000116017	ARID3A	protein_coding	Intergenic	.	.	Alu	0.307692
19	932096	A->G	+	ENSG00000116017	ARID3A	protein_coding	Intergenic	.	.	Alu	0.153846
20	519469	A->G	-	ENSG00000101266	CSNK2A1	protein_coding	Intergenic	.	.	Alu	0.2
20	519492	A->G	-	ENSG00000101266	CSNK2A1	protein_coding	Intergenic	.	.	Alu	0.2
20	522798	A->G	-	ENSG00000101266	CSNK2A1	protein_coding	Intergenic	.	.	Alu	0.2
1	1221498	A->G	-	ENSG00000078808	SDF4	protein_coding	Intergenic	.	.	Alu	0.714286
1	1221502	A->G	-	ENSG00000078808	SDF4	protein_coding	Intergenic	.	.	Alu	0.571429
1	1318042	A->G	-	ENSG00000127054	INTS11	protein_coding	Intergenic	.	.	Alu	0.272727
1	1318044	A->G	-	ENSG00000127054	INTS11	protein_coding	Intergenic	.	.	Alu	0.363636
1	1395960	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.133333
1	1397089	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.2
1	1397090	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.25
1	1397154	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.294118
1	1397155	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.117647
1	1397387	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.173913
1	1397392	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.238095
1	1397431	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.0540541
1	1397605	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.1875
1	1397743	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.0555556
1	1397753	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.305556
1	1397765	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.114286
1	1397789	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.5
1	1397805	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.354839
1	1397815	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.111111
1	1397855	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.166667
1	1402726	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.0833333
1	1402786	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.785714
1	1403309	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.2
1	1403319	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.384615
1	1403340	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.272727
1	1403404	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.4
1	1403902	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.0952381
1	1403904	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.1
1	1404035	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.0689655
1	1404066	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.142857
1	1404639	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.181818
1	1483150	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intergenic	.	.	Alu	0.1875
1	1638701	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.230769
1	1644735	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.125
1	1644747	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.0571429
1	1644762	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.0714286
1	1644795	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.2
1	1646520	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.291667
1	1646597	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.153846
1	1647255	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.862745
1	1647280	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.803571
1	1648134	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.209302
1	1648327	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.375
1	1649238	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.307692
1	1649244	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.2
1	1650783	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.153846
1	1651889	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.12
1	1651893	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.125
1	1651926	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.6
1	1652061	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.478261
1	1706025	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.111111
1	1706449	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.166667
1	1706466	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.25
1	1706467	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.166667
1	1714792	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.227273
1	1715962	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.0434783
1	1716000	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.1
1	1716690	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.0740741
1	1716739	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.125
1	1717028	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.0882353
1	1717029	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.0882353
1	1717045	A->G	-	ENSG00000008128	CDK11A	protein_coding	Intergenic	.	.	Alu	0.0588235
1	1821917	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1821918	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1835810	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1836076	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1841383	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1852579	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.25
1	1854660	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1854686	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.133333
1	1854689	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1875
1	1854722	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1859113	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1862122	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.25
1	1866760	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.125
1	1868526	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1868601	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.588235
1	1868624	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.111111
1	1870040	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3
1	1870269	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.4
1	1870332	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1870335	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	1870341	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	1870342	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	1870389	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.136364
1	1870709	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	1874358	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	1874704	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	1875246	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.108108
1	1875254	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0571429
1	1875294	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.148148
1	1875320	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.103448
1	1875330	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.136364
1	1875356	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	1875363	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	1875372	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.105263
1	1875584	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	1876402	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.08
1	1877044	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1877178	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	1877293	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1877584	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.105263
1	1877610	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1877611	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.12
1	1879992	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.121212
1	1880021	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	1880099	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	1880212	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.307692
1	1880219	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	1880344	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.115385
1	1880460	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1880476	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.5
1	1881512	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.310345
1	1881542	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.15
1	1881603	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1882192	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.157895
1	1882198	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.206897
1	1882204	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	1882306	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1882346	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.230769
1	1882821	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.173913
1	1882838	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.08
1	1883045	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.111111
1	1883046	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.185185
1	1883047	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	1883128	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	1883150	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	1883156	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.35
1	1883160	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	1883210	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0512821
1	1883222	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	1883225	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	1883273	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.136364
1	1884271	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1
1	1884409	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	1886055	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1886255	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	1886844	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1886918	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1887731	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.230769
1	1887737	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.307692
1	1887744	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1888633	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	1888716	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1888738	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.461538
1	1888776	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1888777	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1888846	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.285714
1	1889577	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.125
1	2244070	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.235294
1	2244095	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.222222
1	2244105	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.3125
1	2244107	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.133333
1	2279806	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.166667
1	3786017	A->G	-	ENSG00000130764	LRRC47	protein_coding	Intergenic	.	.	Alu	0.2
1	3786086	A->G	-	ENSG00000130764	LRRC47	protein_coding	Intergenic	.	.	Alu	0.461538
1	3786129	A->G	-	ENSG00000130764	LRRC47	protein_coding	Intergenic	.	.	Alu	0.2
1	6192164	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.181818
1	6192187	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.230769
1	6192246	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.416667
1	6547604	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.105263
1	6547683	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.647059
1	6547689	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.277778
1	6547811	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.454545
1	6549133	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.4
1	6549135	A->G	-	ENSG00000162408	NOL9	protein_coding	Intergenic	.	.	Alu	0.5
1	6838780	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.2
1	6838836	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	6838857	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.214286
1	6838859	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	6838884	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.454545
1	6838890	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.909091
1	6838931	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	6844575	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.117647
1	6848283	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	6848377	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.2
1	6860751	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	6860758	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	6860759	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.230769
1	6861064	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.384615
1	6861065	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.666667
1	6861121	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	6861122	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.272727
1	6861185	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	6861232	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.333333
1	6867879	A->G	+	ENSG00000171735	CAMTA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	8403545	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.133333
1	8412456	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.6
1	8413405	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8413411	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.272727
1	8413435	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.153846
1	8413440	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.153846
1	8413864	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.153846
1	8413995	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8414554	A->G	-	ENSG00000142599	RERE	protein_coding	Intergenic	.	.	Alu	0.181818
1	8876913	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.105263
1	9557539	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.333333
1	9557540	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.133333
1	9557541	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.133333
1	9564874	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.153846
1	9571738	A->G	+	ENSG00000171612	SLC25A33	protein_coding	Intergenic	.	.	Alu	0.181818
1	9711330	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.363636
1	9713670	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.166667
1	9928847	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.25
2	3546993	A->G	-	ENSG00000171865	RNASEH1	protein_coding	Intergenic	.	.	Alu	0.4
2	3556366	A->G	-	ENSG00000171865	RNASEH1	protein_coding	Intergenic	.	.	Alu	0.416667
2	8777346	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.153846
2	8822451	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.125
2	8822458	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.230769
2	8823068	A->G	-	ENSG00000134313	KIDINS220	protein_coding	Intergenic	.	.	Alu	0.333333
2	9507488	A->G	-	ENSG00000239300	AC080162.1	antisense	Intergenic	.	.	Alu	0.181818
2	9516306	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.153846
2	9516365	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.4
2	9524259	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.384615
2	9524290	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.6
2	9524291	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.6
2	9524408	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.357143
2	9525191	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.117647
2	9531034	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9532078	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.176471
2	9532079	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.117647
2	9533129	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.181818
2	9549558	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9549566	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.230769
2	9549567	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.307692
2	9549774	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.230769
2	9553449	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.142857
2	9603736	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.916667
2	9617679	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.142857
2	9617696	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.142857
2	9618795	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.142857
2	9624814	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.142857
2	9624846	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.142857
2	9624881	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.272727
2	9624910	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.166667
2	9625016	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.214286
2	9625017	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.133333
2	9625140	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.166667
2	9625162	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.25
2	9855195	A->G	+	ENSG00000115750	TAF1B	protein_coding	Intergenic	.	.	Alu	0.2
2	9881079	A->G	+	ENSG00000115750	TAF1B	protein_coding	Intergenic	.	.	Alu	0.2
3	5123967	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.0909091
3	5130277	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.230769
3	5131167	A->G	+	ENSG00000134108	ARL8B	protein_coding	Intergenic	.	.	Alu	0.133333
3	9651746	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.363636
3	9651752	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.3
3	9652052	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.111111
3	9652091	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.117647
3	9652185	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.153846
3	9652538	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.176471
3	9652629	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.25
3	9652788	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.230769
3	9652789	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.153846
3	9652825	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.230769
3	9656110	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.272727
3	9656120	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.153846
3	9656145	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.105263
3	9656440	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.125
3	9656515	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.0869565
3	9656522	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.105263
3	9656579	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.133333
3	9656604	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.117647
3	9656623	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.105263
3	9656629	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.105263
3	9656634	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.263158
3	9657731	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9657810	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.0555556
3	9657829	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.0882353
3	9658926	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.0666667
3	9659114	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.272727
3	9666227	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.176471
3	9666343	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.176471
3	9798342	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.153846
3	9798352	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.0769231
3	9798359	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.227273
3	9798466	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.133333
3	9799496	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.133333
4	1694530	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.153846
4	1706082	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.133333
4	1706097	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.2
4	1706555	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.1
4	1707424	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.181818
4	1707480	A->G	-	ENSG00000163950	SLBP	protein_coding	Intergenic	.	.	Alu	0.166667
4	1731661	A->G	+	ENSG00000013810	TACC3	protein_coding	Intergenic	.	.	Alu	0.117647
4	1731675	A->G	+	ENSG00000013810	TACC3	protein_coding	Intergenic	.	.	Alu	0.2
4	1731877	A->G	+	ENSG00000013810	TACC3	protein_coding	Intergenic	.	.	Alu	0.2
4	2477464	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.266667
4	2477470	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2477496	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2477497	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.133333
4	2491354	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2497679	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.153846
4	2497683	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.153846
4	2497698	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2497752	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.142857
4	2497761	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.142857
4	2497764	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2497819	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2497841	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.363636
4	2498313	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2498385	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2498388	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.166667
4	2498393	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.142857
4	2498720	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0769231
4	2498728	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2499908	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.190476
4	2499978	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0714286
4	2499990	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0666667
4	2499994	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0689655
4	2503143	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.428571
4	2503149	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2506772	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.133333
4	2506832	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.1
4	2539642	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
4	2539669	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2542350	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.142857
4	2544809	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.25
4	2547518	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.583333
4	2553318	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
4	2848064	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.125
4	2848065	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.125
4	2848095	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.142857
4	2848127	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.1
4	2848154	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.222222
4	2848156	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.142857
4	2848492	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.25
4	2848548	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.272727
4	2848711	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.133333
4	2848745	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.333333
4	2850368	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.4
4	2851117	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.117647
4	2853703	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.153846
4	2853704	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.230769
4	2853733	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.2
4	2854265	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.3
4	2856692	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.181818
4	2856709	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.2
4	2857123	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.2
4	2857379	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.352941
4	2863073	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.166667
4	2863758	A->G	+	ENSG00000087274	ADD1	protein_coding	Intergenic	.	.	Alu	0.25
4	3084305	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.153846
4	3128176	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.2
4	3128180	A->G	+	ENSG00000197386	HTT	protein_coding	Intergenic	.	.	Alu	0.2
4	6800636	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.3
4	6838409	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.2
4	6840748	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.363636
4	6840749	A->G	+	ENSG00000170871	KIAA0232	protein_coding	Intergenic	.	.	Alu	0.166667
4	7064698	A->G	-	ENSG00000109519	GRPEL1	protein_coding	Intergenic	.	.	Alu	0.153846
4	8204357	A->G	+	ENSG00000125089	SH3TC1	protein_coding	Intergenic	.	.	Alu	0.363636
4	9538612	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	6610106	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.176471
5	6610161	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.8
5	6610202	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.4
5	6610265	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.529412
5	6610272	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.375
5	6610273	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.6875
5	6610328	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.285714
5	6610350	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.4
5	6610351	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.266667
5	6610601	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.846154
5	6610621	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.818182
5	6610643	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.454545
5	6630470	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.125
5	6630485	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.111111
5	6630509	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.0869565
5	6630982	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.333333
5	6631047	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.166667
6	3069756	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.782609
6	3069757	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.826087
6	3069946	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.25
6	3069973	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.857143
6	3070457	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.142857
6	3070459	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.1
6	3070461	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.0952381
6	3070477	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.315789
6	3070512	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.142857
6	3070513	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.142857
6	3070537	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.5
6	3070538	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.6
6	3070587	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.153846
6	3070603	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.461538
6	3070604	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.230769
6	3070612	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.230769
6	3070618	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.142857
6	3070635	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.5
6	3070638	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.142857
6	3074941	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.0769231
6	3076397	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.111111
6	3076458	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.107143
6	3078079	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.818182
6	3078081	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.5
6	3078265	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.12
6	3078292	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.185185
6	4035826	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.0952381
6	4035847	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.0869565
6	4035922	A->G	+	ENSG00000112739	PRPF4B	protein_coding	Intergenic	.	.	Alu	0.153846
6	4787972	A->G	+	ENSG00000153046	CDYL	protein_coding	Intergenic	.	.	Alu	0.2
6	7118144	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.4
6	7118157	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.363636
6	7118164	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
6	7119283	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.5
6	7119292	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.25
6	7119334	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.1875
6	7121033	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.25
6	7155525	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
6	7155545	A->G	+	ENSG00000124782	RREB1	protein_coding	Intergenic	.	.	Alu	0.2
6	7395943	A->G	+	ENSG00000124784	RIOK1	protein_coding	Intergenic	.	.	Alu	0.5
7	1505330	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
7	1505351	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
7	1505624	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
7	1534927	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.181818
7	1534957	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.125
7	1535005	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.133333
7	1535006	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.333333
7	1535009	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.538462
7	1535186	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.142857
7	1535193	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.192308
7	1535393	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.761905
7	1535400	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.111111
7	1535464	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.722222
7	1535469	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.352941
7	1535540	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.0869565
7	1535557	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.222222
7	1535595	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.181818
7	2369906	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.5
7	2369986	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.153846
7	2370038	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.333333
7	2370039	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.166667
7	2370266	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.818182
7	2370346	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.363636
7	2370362	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.153846
7	2370366	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.142857
7	2532096	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
7	2532297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.37037
7	2535168	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
7	2676572	A->G	-	.	.	.	Intergenic	.	.	Alu	1
7	2942633	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.2
7	2942660	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.3
7	4777937	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.153846
7	4786840	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.5
7	4786888	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.181818
7	4786910	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.153846
7	4786952	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.181818
7	4787365	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.294118
7	4787406	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.133333
7	4787435	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.636364
7	4787443	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.4
7	4992457	A->G	+	ENSG00000272968	RBAK-RBAKDN	protein_coding	Intergenic	.	.	Alu	0.307692
7	4992458	A->G	+	ENSG00000272968	RBAK-RBAKDN	protein_coding	Intergenic	.	.	Alu	0.214286
7	4992981	A->G	+	ENSG00000272968	RBAK-RBAKDN	protein_coding	Intergenic	.	.	Alu	0.15
7	4992982	A->G	+	ENSG00000272968	RBAK-RBAKDN	protein_coding	Intergenic	.	.	Alu	0.166667
7	5193645	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.166667
7	5193675	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.166667
7	5193676	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.153846
7	5193830	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.176471
7	5195829	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.153846
7	5195868	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.166667
7	5195918	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.133333
7	5195924	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.125
7	5199129	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.2
7	5201661	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.230769
7	5201671	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.454545
7	5201678	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.4
7	5201696	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.142857
7	5204399	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.2
7	5205710	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.454545
7	5212557	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.133333
7	5212633	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.1875
7	5212646	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.117647
7	5212679	A->G	+	ENSG00000157954	WIPI2	protein_coding	Intergenic	.	.	Alu	0.266667
7	5326517	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.272727
7	5327042	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
7	5392613	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.333333
7	5392614	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.25
7	5392745	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.0833333
7	5413645	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.2
7	5416599	A->G	-	ENSG00000182095	TNRC18	protein_coding	Intergenic	.	.	Alu	0.166667
7	5661681	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.4
7	5661691	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.5
7	5676174	A->G	-	ENSG00000237738	RNF216-IT1	sense_intronic	Intergenic	.	.	Alu	0.153846
7	5709827	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.142857
7	5710115	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.2
7	5710168	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.2
7	5710197	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.272727
7	5710215	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.3
7	5710248	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.166667
7	5719163	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.272727
7	5736255	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.466667
7	5736256	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.411765
7	5736394	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.666667
7	5739916	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.2
7	5773470	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.181818
7	5773513	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.2
7	6111673	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.2
7	6115837	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.0645161
7	6119833	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.181818
7	6132033	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.181818
7	6132036	A->G	+	ENSG00000106346	USP42	protein_coding	Intergenic	.	.	Alu	0.181818
7	6427401	A->G	-	ENSG00000164535	DAGLB	protein_coding	Intergenic	.	.	Alu	0.2
7	6428583	A->G	-	ENSG00000164535	DAGLB	protein_coding	Intergenic	.	.	Alu	0.166667
7	6751920	A->G	+	ENSG00000187953	PMS2CL	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0882353
8	1006068	A->G	+	ENSG00000198010	DLGAP2	protein_coding	Intergenic	.	.	Alu	0.545455
8	1006069	A->G	+	ENSG00000198010	DLGAP2	protein_coding	Intergenic	.	.	Alu	0.833333
8	1006110	A->G	+	ENSG00000198010	DLGAP2	protein_coding	Intergenic	.	.	Alu	0.2
8	1006168	A->G	+	ENSG00000198010	DLGAP2	protein_coding	Intergenic	.	.	Alu	0.25
8	1006171	A->G	+	ENSG00000198010	DLGAP2	protein_coding	Intergenic	.	.	Alu	0.916667
8	9686114	A->G	+	ENSG00000173273	TNKS	protein_coding	Intergenic	.	.	Alu	0.545455
9	4730596	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.454545
9	4733048	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.25
9	4733065	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.181818
9	4735952	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.272727
9	4736738	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.142857
9	4738936	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.166667
9	4739473	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.117647
9	4739767	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.307692
9	4739793	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.142857
9	4739807	A->G	-	ENSG00000147853	AK3	protein_coding	Intergenic	.	.	Alu	0.181818
9	5701479	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.181818
9	5701544	A->G	+	ENSG00000107036	RIC1	protein_coding	Intergenic	.	.	Alu	0.181818
9	6426776	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.2
9	6434911	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.181818
9	6441123	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.2
9	6463574	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.333333
9	6476804	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.214286
9	6477068	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.133333
9	6477082	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.133333
9	6477083	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.133333
9	6487270	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.2
9	6487288	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.2
9	6487289	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.2
9	6487397	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.133333
9	6487509	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.181818
9	6487641	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.3
9	6487682	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.266667
9	6487722	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.105263
9	6488939	A->G	+	ENSG00000147854	UHRF2	protein_coding	Intergenic	.	.	Alu	0.153846
10	1059747	A->G	+	ENSG00000047056	WDR37	protein_coding	Intergenic	.	.	Alu	0.4
10	3102632	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.266667
10	3102641	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.444444
10	3102661	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.097561
10	3102675	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.361111
10	3126485	A->G	+	ENSG00000067057	PFKP	protein_coding	Intergenic	.	.	Alu	0.263158
10	5688294	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.4
10	5688302	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.2
10	5688888	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.454545
10	5697945	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.416667
10	5715760	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.272727
10	5715769	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.166667
10	5715782	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.2
10	5716659	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.263158
10	5716660	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.105263
10	5716725	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.136364
10	5716737	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.333333
10	5716739	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.153846
10	5716768	A->G	+	ENSG00000108021	FAM208B	protein_coding	Intergenic	.	.	Alu	0.2
10	5803300	A->G	-	ENSG00000057608	GDI2	protein_coding	Intergenic	.	.	Alu	0.166667
10	6568121	A->G	-	ENSG00000065675	PRKCQ	protein_coding	Intergenic	.	.	Alu	0.2
10	6568126	A->G	-	ENSG00000065675	PRKCQ	protein_coding	Intergenic	.	.	Alu	0.3
11	2320221	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
11	2320222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
11	2969250	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.153846
11	2972930	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.136364
11	2972965	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0833333
11	2972969	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.1
11	2973829	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0638298
11	2973866	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0540541
11	2973893	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0625
11	2973897	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.08
11	2973981	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0689655
11	2974000	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	2974014	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.235294
11	2974040	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.2
11	2974047	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.333333
11	2974054	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.176471
11	2975002	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.208333
11	2975218	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.2
11	2975235	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0666667
11	2975496	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0769231
11	2980352	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.142857
11	2980362	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.166667
11	2980384	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.272727
11	2980452	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.12
11	2980465	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0625
11	2980481	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.375
11	2981047	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.117647
11	2981612	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.142857
11	2981824	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0952381
11	2982957	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0833333
11	2983449	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.272727
11	2983492	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0869565
11	2986210	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.157895
11	2986262	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.214286
11	2986314	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0465116
11	2986327	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.166667
11	2986328	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.0857143
11	2986829	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.307692
11	2986831	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.214286
11	2986875	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.117647
11	3698430	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.416667
11	3698431	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.416667
11	3698484	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.222222
11	3698506	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0869565
11	3698605	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0833333
11	3698791	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.357143
11	3698821	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.466667
11	3698822	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.571429
11	3722704	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.411765
11	3722716	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.157895
11	3722731	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.266667
11	3722805	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.363636
11	3736476	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3738522	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3738557	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.272727
11	3738612	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3738615	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3743097	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.266667
11	3750363	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3750855	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.25
11	3750882	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.133333
11	3755339	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.214286
11	3756898	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.666667
11	3790981	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.25
11	3791282	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.3125
11	3791350	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.235294
11	3791422	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0869565
11	3791426	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.130435
11	3792392	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.05
11	3793025	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1875
11	3793084	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3793400	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.117647
11	3793714	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.6
11	3793857	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.133333
11	3793883	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.148148
11	3793886	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0769231
11	3793912	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0909091
11	3794739	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.296296
11	3794752	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0606061
11	3794860	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.176471
11	3794864	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.117647
11	3795274	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.466667
11	3795324	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.133333
11	3795346	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.125
11	3795415	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.5
11	3795440	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1
11	3833415	A->G	-	ENSG00000177105	RHOG	protein_coding	Intergenic	.	.	Alu	0.0869565
11	3876454	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.181818
11	3876509	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.153846
11	3885291	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.25
11	3893980	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.272727
11	3901136	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.166667
11	3901163	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.230769
11	3913688	A->G	+	ENSG00000167323	STIM1	protein_coding	Intergenic	.	.	Alu	0.25
11	4096143	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.181818
11	5692722	A->G	+	ENSG00000132274	TRIM22	protein_coding	Intergenic	.	.	Alu	0.181818
11	5692727	A->G	+	ENSG00000132274	TRIM22	protein_coding	Intergenic	.	.	Alu	0.2
11	6490076	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.166667
11	6490099	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.153846
11	6490139	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.133333
11	6490153	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.0952381
11	6490171	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.277778
11	6490958	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.428571
11	6490981	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.307692
11	6491034	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.428571
11	6491061	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.133333
11	6491063	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.333333
11	6491066	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.285714
11	6491441	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.3
11	6491483	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.25
11	6491486	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.272727
11	6492713	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.2
11	6492715	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.4
11	6495564	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.307692
11	6495567	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.214286
11	6495569	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.333333
11	6495596	A->G	+	ENSG00000283977	AC084337.2	protein_coding	Intergenic	.	.	Alu	0.153846
11	8951849	A->G	-	ENSG00000175348	TMEM9B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9173861	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9196658	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.363636
11	9196830	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9216936	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9216984	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9216995	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9230976	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.117647
11	9238866	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.125
11	9239689	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9240211	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.125
11	9240214	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9240658	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.176471
11	9241931	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9244767	A->G	-	ENSG00000255097	AP006259.1	sense_intronic	Intergenic	.	.	Alu	0.166667
11	9245830	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9245838	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9248018	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0909091
11	9248191	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.176471
11	9248199	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.117647
11	9248433	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0833333
11	9249959	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9249960	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9249982	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9252480	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.454545
11	9252481	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9252888	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.142857
11	9252915	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.157895
11	9253024	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9253079	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.08
11	9253125	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0666667
11	9253139	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.4
11	9253528	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0833333
11	9254307	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0714286
11	9255987	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.272727
11	9259681	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.25
11	9260969	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.117647
11	9260973	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.153846
11	9261130	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.3
11	9261527	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.26087
11	9261532	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.0869565
11	9261598	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9261721	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.2
11	9289034	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.545455
11	9289037	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.272727
11	9289038	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.727273
11	9289172	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0666667
11	9290137	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0689655
11	9290187	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0869565
11	9290211	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.25
11	9290253	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.565217
11	9290255	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.115385
11	9290294	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.148148
11	9290315	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.2
11	9290375	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.136364
11	9290875	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0666667
11	9290884	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0512821
11	9290911	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.137931
11	9290924	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0666667
11	9290948	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.2
11	9290949	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9290950	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.217391
11	9290959	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.208333
11	9290967	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0909091
11	9290992	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.136364
11	9291056	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.52
11	9291072	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0967742
11	9291085	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.275862
11	9291097	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.222222
11	9291102	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.1
11	9291158	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.259259
11	9291164	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.166667
11	9291203	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.15
11	9291258	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.555556
11	9291260	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.125
11	9291265	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.266667
11	9291319	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9291756	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.235294
11	9291771	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0571429
11	9291856	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.08
11	9291872	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.4
11	9291885	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.111111
11	9291886	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0740741
11	9291902	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0833333
11	9291920	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.105263
11	9291926	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.176471
11	9291973	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.172414
11	9291978	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.148148
11	9291981	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.222222
11	9292001	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0689655
11	9292581	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.15
11	9292590	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.5
11	9292595	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.315789
11	9292607	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.590909
11	9292608	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.190476
11	9292745	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.4
11	9292771	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.08
11	9292774	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.56
11	9293190	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0425532
11	9293200	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0512821
11	9293205	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.387097
11	9293210	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.151515
11	9293241	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.15
11	9293292	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.117647
11	9293863	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0909091
11	9293960	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.0833333
11	9293970	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.26087
11	9294250	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.166667
11	9294412	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.461538
11	9294426	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.166667
11	9294432	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.266667
11	9294485	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9296514	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.2
11	9297038	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.3
11	9297047	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9297450	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.2
11	9432471	A->G	+	ENSG00000254397	AC132192.1	antisense	Intergenic	.	.	Alu	0.166667
12	2829548	A->G	+	ENSG00000111203	ITFG2	protein_coding	Intergenic	.	.	Alu	0.2
12	4298495	A->G	+	ENSG00000118971	CCND2	protein_coding	Intergenic	.	.	Alu	0.2
12	6576185	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.133333
12	6576428	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.111111
12	6576453	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.190476
12	6576503	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.347826
12	6576508	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.0952381
12	6576509	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.0909091
12	6576510	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.272727
12	6576534	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.3
12	6577034	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.117647
12	6577048	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.266667
12	6577237	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.133333
12	6577240	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.133333
12	6577300	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.133333
12	6577339	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.105263
12	6577362	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.3
12	6586533	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.411765
12	6586664	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.6875
12	7010909	A->G	-	ENSG00000111684	LPCAT3	protein_coding	Intergenic	.	.	Alu	0.2
12	7923532	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.2
12	7923592	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.111111
12	7928766	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	1
12	7932245	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.133333
12	7934798	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	1
12	7935631	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	1
12	9060207	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	0.272727
12	9060229	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	0.153846
12	9061137	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	0.615385
12	9061283	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	1
12	9061284	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	1
12	9061294	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	0.307692
12	9061387	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	0.2
12	9061393	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	0.2
12	9061399	A->G	+	ENSG00000214851	LINC00612	processed_transcript	Intergenic	.	.	Alu	0.3
12	9082449	A->G	+	ENSG00000175899	A2M	protein_coding	Intergenic	.	.	Alu	0.5
12	9121357	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	9150844	A->G	+	ENSG00000126838	PZP	protein_coding	Intergenic	.	.	Alu	0.454545
12	9187413	A->G	+	ENSG00000126838	PZP	protein_coding	Intergenic	.	.	Alu	0.692308
12	9649312	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intergenic	.	.	Alu	0.447368
12	9651585	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intergenic	.	.	Alu	0.285714
12	9658649	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.357143
12	9658655	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.166667
12	9658872	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	1
12	9658889	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.181818
12	9659352	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.916667
12	9659578	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.6
12	9659581	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.3
12	9659634	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.21875
12	9662186	A->G	+	.	.	.	Intergenic	.	.	Alu	1
12	9663271	A->G	+	.	.	.	Intergenic	.	.	Alu	1
12	9680384	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	1
12	9694090	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.166667
12	9757683	A->G	-	ENSG00000110848	CD69	protein_coding	Intergenic	.	.	Alu	0.511628
12	9857785	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.103448
12	9857800	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.384615
12	9857816	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.360656
12	9857820	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0655738
12	9857827	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0566038
12	9857873	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.15493
12	9857892	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0625
12	9857937	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.638298
12	9857938	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.5
12	9857951	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.117647
12	9857970	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.111111
12	9858822	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.121622
12	9858827	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0921053
12	9858830	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.205128
12	9858865	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0862069
12	9858901	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0652174
12	9858949	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.512195
12	9858964	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.5
12	9858969	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.479167
12	9858989	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.0612245
12	9859038	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.109375
12	9859098	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.111111
12	9859099	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.25641
16	1353745	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intergenic	.	.	Alu	0.181818
16	1359298	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intergenic	.	.	Alu	0.615385
16	1359529	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intergenic	.	.	Alu	0.5
16	1359533	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intergenic	.	.	Alu	0.2
16	1360057	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intergenic	.	.	Alu	0.272727
16	1360058	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intergenic	.	.	Alu	0.272727
16	1380765	A->G	-	ENSG00000059145	UNKL	protein_coding	Intergenic	.	.	Alu	0.166667
16	1389375	A->G	-	ENSG00000059145	UNKL	protein_coding	Intergenic	.	.	Alu	0.111111
16	1389480	A->G	-	ENSG00000059145	UNKL	protein_coding	Intergenic	.	.	Alu	0.25
16	1390044	A->G	-	ENSG00000059145	UNKL	protein_coding	Intergenic	.	.	Alu	0.181818
16	1750442	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.2
16	1752465	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.176471
16	1752469	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.133333
16	1753340	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.117647
16	1753355	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.222222
16	1753393	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.3
16	1756715	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.3
16	1756804	A->G	+	ENSG00000138834	MAPK8IP3	protein_coding	Intergenic	.	.	Alu	0.133333
16	2225157	A->G	+	ENSG00000167967	E4F1	protein_coding	Intergenic	.	.	Alu	0.166667
16	2261030	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.166667
16	2522357	A->G	+	ENSG00000259784	AC093525.1	protein_coding	Intergenic	.	.	Alu	0.181818
16	3460383	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.125
16	3460412	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.454545
16	3460428	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.25
16	3460464	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.2
16	3465090	A->G	+	ENSG00000122390	NAA60	protein_coding	Intergenic	.	.	Alu	0.2
16	3732838	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.3
16	3780025	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.2
16	3843535	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.1
16	3843545	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.105263
16	3843679	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.421053
16	3843686	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.1
16	3861207	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.181818
16	3865916	A->G	-	ENSG00000005339	CREBBP	protein_coding	Intergenic	.	.	Alu	0.363636
16	4397504	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.235294
16	4398080	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.142857
16	4398199	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.3
16	4413605	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.117647
16	4806683	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.2
16	4815958	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.3
16	4816006	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.2
16	4816424	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.5
16	4842510	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4843358	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4843379	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.142857
16	4843387	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.133333
16	4843392	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.2
16	4854437	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.3
16	4854601	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.142857
16	4854984	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.133333
16	4855353	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.4
16	4855741	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.142857
16	4855757	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.2
16	4855758	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.133333
16	4866532	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.181818
16	4866613	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.2
16	4866630	A->G	+	ENSG00000118900	UBN1	protein_coding	Intergenic	.	.	Alu	0.153846
16	8914867	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.153846
16	8931274	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.2
16	8931361	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.4
16	8939910	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.3
16	8952150	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.2
16	8952155	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.105263
16	8952216	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.111111
16	8952975	A->G	-	ENSG00000187555	USP7	protein_coding	Intergenic	.	.	Alu	0.2
17	1348779	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.153846
17	1351216	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.2
17	1351254	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.272727
17	1351326	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.266667
17	1351391	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	1
17	1351880	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.133333
17	1351884	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.142857
17	1358706	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.133333
17	1358708	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.4
17	1358718	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.133333
17	1358794	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.2
17	1359198	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0645161
17	1360100	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.214286
17	1360502	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0909091
17	1360544	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0714286
17	1360579	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0909091
17	1360644	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.0909091
17	1382790	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.181818
17	1450764	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.125
17	1452543	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.2
17	1452741	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.142857
17	1453046	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.0909091
17	1453051	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.136364
17	1514078	A->G	-	ENSG00000132376	INPP5K	protein_coding	Intergenic	.	.	Alu	0.166667
17	1515003	A->G	-	ENSG00000132376	INPP5K	protein_coding	Intergenic	.	.	Alu	0.538462
17	1672372	A->G	-	ENSG00000174231	PRPF8	protein_coding	Intergenic	.	.	Alu	0.181818
17	2277923	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.9
17	2280468	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.285714
17	2280522	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.384615
17	2280535	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.333333
17	2280536	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.25
17	2280937	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.153846
17	2280950	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.357143
17	2280956	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.444444
17	2280972	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.526316
17	2281401	A->G	-	ENSG00000070366	SMG6	protein_coding	Intergenic	.	.	Alu	0.285714
17	2596830	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.105263
17	2596881	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.125
17	2596883	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.111111
17	2596941	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2597550	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2597591	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.125
17	2597611	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.176471
17	2598046	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.117647
17	2600097	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2600109	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.333333
17	2603802	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.230769
17	2604131	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.117647
17	2604177	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.117647
17	2604180	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.1875
17	2604218	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.157895
17	2604240	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.142857
17	2604273	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2604627	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.08
17	2604664	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.136364
17	2607449	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.153846
17	2608129	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.142857
17	2608592	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.133333
17	2608596	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.1875
17	2608651	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.352941
17	2608652	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.176471
17	2623908	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.125
17	2624757	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.133333
17	2643831	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2644270	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.142857
17	2644332	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.153846
17	2671455	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.142857
17	2671696	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.4
17	2672006	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.454545
17	2672010	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.272727
17	2672012	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2672013	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2672039	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.3
17	2672107	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.3
17	2672109	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2672204	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2672218	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.153846
17	2672223	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.833333
17	2674859	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2675250	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.272727
17	2675255	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.416667
17	2675265	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.133333
17	2675538	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.545455
17	2675568	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	3823622	A->G	-	ENSG00000074356	NCBP3	protein_coding	Intergenic	.	.	Alu	0.733333
17	3823626	A->G	-	ENSG00000074356	NCBP3	protein_coding	Intergenic	.	.	Alu	0.142857
17	3823631	A->G	-	ENSG00000074356	NCBP3	protein_coding	Intergenic	.	.	Alu	0.285714
17	3899340	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.769231
17	3899341	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.846154
17	3909596	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.5
17	3909602	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.2
17	3938917	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.3
17	4111865	A->G	-	ENSG00000074755	ZZEF1	protein_coding	Intergenic	.	.	Alu	0.2
17	4274823	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.153846
17	4284382	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.181818
17	4284419	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.181818
17	4284518	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.125
17	4284524	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.125
17	4284935	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.105263
17	4285040	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.142857
17	4286767	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.125
17	4291277	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.266667
17	4291278	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.133333
17	4296476	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.214286
17	4296489	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.2
17	4299352	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.157895
17	4299353	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.105263
17	4300815	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.181818
17	4306317	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.142857
17	4315496	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.142857
17	4354930	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.166667
17	4354967	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.153846
17	4358293	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.1
17	4358363	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.3
17	4358889	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.266667
17	4362786	A->G	-	ENSG00000132388	UBE2G1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	4713013	A->G	+	ENSG00000141480	ARRB2	protein_coding	Intergenic	.	.	Alu	0.384615
17	4713551	A->G	+	ENSG00000141480	ARRB2	protein_coding	Intergenic	.	.	Alu	0.105263
17	5290295	A->G	+	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.363636
17	5303431	A->G	+	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.3
17	5376238	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.2
17	5382129	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.133333
17	5382142	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.133333
17	5382150	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.5
17	5382174	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.4
17	5382556	A->G	-	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.2
17	5395631	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.0952381
17	5395760	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.6875
17	5395764	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.25
17	5397089	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.117647
17	5414377	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.5
17	5415900	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.277778
17	5415901	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.111111
17	5415915	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.176471
17	5415927	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.272727
17	5415952	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.444444
17	5416032	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.4
17	5416033	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.2
17	5416045	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.9
17	5416898	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.142857
17	5416924	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.214286
17	5416960	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.103448
17	5416975	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.0769231
17	5416986	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.107143
17	5417052	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.08
17	5417464	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.1
17	5417465	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.15
17	5418284	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.3
17	5418340	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.133333
17	5418365	A->G	-	ENSG00000108559	NUP88	protein_coding	Intergenic	.	.	Alu	0.142857
17	5423255	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.2
17	5423269	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.3
17	5423783	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.153846
17	5423852	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.153846
17	5423853	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.142857
17	5424081	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.375
17	5424130	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.4
17	5424314	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.2
17	5424378	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.2
17	5487377	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.6
17	5512965	A->G	-	ENSG00000091592	NLRP1	protein_coding	Intergenic	.	.	Alu	0.5
17	5513748	A->G	-	ENSG00000091592	NLRP1	protein_coding	Intergenic	.	.	Alu	0.4
17	5531478	A->G	-	ENSG00000091592	NLRP1	protein_coding	Intergenic	.	.	Alu	0.3
17	5557168	A->G	-	ENSG00000091592	NLRP1	protein_coding	Intergenic	.	.	Alu	0.214286
17	5557198	A->G	-	ENSG00000091592	NLRP1	protein_coding	Intergenic	.	.	Alu	0.166667
17	7488606	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.153846
17	7490282	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.333333
17	7490309	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.133333
17	7490558	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.25
17	7491221	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.166667
17	7491259	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.285714
17	7491260	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.333333
17	7491345	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.263158
17	7491387	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.153846
17	7491437	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.2
17	7492385	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.285714
17	7492447	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.214286
17	7492448	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.4
17	7492483	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.5
17	7492525	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.666667
17	8472459	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.181818
17	8472460	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.181818
17	8472464	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.285714
17	8472545	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.333333
17	8473261	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.333333
17	8473423	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.2
18	2660567	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.1
18	2660600	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
18	2660657	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.266667
18	2660683	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.307692
18	2668944	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.1
18	2669091	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.266667
18	2689778	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.176471
18	2708416	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.3125
18	2708470	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.3125
18	2708514	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.0869565
18	2708515	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.130435
18	2708519	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.125
18	2708638	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.285714
18	2708763	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.25
18	2711077	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.117647
18	2720822	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.0869565
18	2722167	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.4375
18	2722236	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.166667
18	2722254	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.0769231
18	2730377	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.105263
18	2734944	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.0869565
18	2786233	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.545455
18	5294443	A->G	-	ENSG00000198081	ZBTB14	protein_coding	Intergenic	.	.	Alu	0.368421
18	8614685	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.642857
18	8614686	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.733333
18	8614715	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.142857
18	8614716	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.153846
18	8614727	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.15
18	8614766	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.166667
18	8614769	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.277778
18	8614775	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.157895
18	8619887	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.1
18	8620013	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.133333
18	8620408	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.208333
18	8630988	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.181818
18	8630989	A->G	+	ENSG00000206418	RAB12	protein_coding	Intergenic	.	.	Alu	0.181818
18	9110528	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.0526316
18	9110532	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.0769231
18	9110633	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.0555556
18	9110634	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.0833333
18	9110691	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.125
18	9110697	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.14
18	9110770	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.0392157
18	9111397	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.433962
18	9111400	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.153846
18	9111408	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.06
18	9111452	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.166667
18	9111663	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.0877193
18	9111709	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.031746
18	9111793	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.363636
18	9111796	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.363636
18	9111828	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.666667
18	9112996	A->G	+	ENSG00000263847	AP005899.1	antisense	Intergenic	.	.	Alu	0.272727
18	9112997	A->G	+	ENSG00000263847	AP005899.1	antisense	Intergenic	.	.	Alu	0.636364
18	9113144	A->G	+	ENSG00000263847	AP005899.1	antisense	Intergenic	.	.	Alu	0.315789
18	9115579	A->G	+	ENSG00000263847	AP005899.1	antisense	Intergenic	.	.	Alu	0.121951
18	9115602	A->G	+	ENSG00000263847	AP005899.1	antisense	Intergenic	.	.	Alu	0.0540541
18	9142626	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.181818
18	9142720	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.285714
18	9143479	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0909091
18	9143480	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.136364
18	9143560	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.333333
18	9143600	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.2
18	9143602	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.125
18	9143672	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.285714
18	9145140	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.125
18	9145200	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.08
18	9146291	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.111111
18	9151984	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.230769
18	9151985	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.153846
18	9153018	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9153068	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0869565
18	9153081	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.1
18	9153086	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.1
18	9159922	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.6
18	9160015	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.363636
18	9160347	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.157895
18	9198624	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.117647
18	9198630	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.333333
18	9198649	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0869565
18	9198650	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0869565
18	9198667	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.15
18	9198689	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.321429
18	9198730	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.227273
18	9198733	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9198792	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.2
18	9198798	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.625
18	9198825	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.111111
18	9199029	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0689655
18	9199054	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0714286
18	9199059	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.333333
18	9199060	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.433333
18	9199064	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.3
18	9199130	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0769231
18	9199135	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.115385
18	9199136	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.222222
18	9199173	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.208333
18	9199179	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.0833333
18	9600798	A->G	-	ENSG00000154845	PPP4R1	protein_coding	Intergenic	.	.	Alu	0.214286
19	1077451	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0454545
19	1078526	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.390244
19	1078534	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0731707
19	1078585	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0571429
19	1078591	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0833333
19	1078594	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0645161
19	1078600	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.25
19	1078631	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.190476
19	1078656	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.2
19	1078671	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.2
19	1079239	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.666667
19	1079246	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.153846
19	1079301	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.1875
19	1079302	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.117647
19	1079345	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.142857
19	1079425	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.166667
19	1385050	A->G	+	ENSG00000115286	NDUFS7	protein_coding	Intergenic	.	.	Alu	0.181818
19	1385051	A->G	+	ENSG00000115286	NDUFS7	protein_coding	Intergenic	.	.	Alu	0.3
19	1414270	A->G	+	ENSG00000071626	DAZAP1	protein_coding	Intergenic	.	.	Alu	0.307692
19	1414279	A->G	+	ENSG00000071626	DAZAP1	protein_coding	Intergenic	.	.	Alu	0.230769
19	1414280	A->G	+	ENSG00000071626	DAZAP1	protein_coding	Intergenic	.	.	Alu	0.153846
19	1437818	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
19	1590377	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.3
19	1590463	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.181818
19	1590603	A->G	-	ENSG00000071655	MBD3	protein_coding	Intergenic	.	.	Alu	0.181818
19	1825151	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.2
19	1825152	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.3
19	1825200	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.454545
19	1825217	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.181818
19	1825218	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.181818
19	1825385	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.352941
19	1825422	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.5
19	1825423	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.25
19	1825591	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.6
19	1825601	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.133333
19	1825613	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.266667
19	2077953	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.166667
19	2077960	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.133333
19	2077984	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.461538
19	2081801	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.3
19	2084018	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.6
19	2134084	A->G	-	ENSG00000065000	AP3D1	protein_coding	Intergenic	.	.	Alu	0.153846
19	2134092	A->G	-	ENSG00000065000	AP3D1	protein_coding	Intergenic	.	.	Alu	0.153846
19	2167816	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.2
19	2168212	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.214286
19	2168230	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.166667
19	2168286	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.307692
19	2170060	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.2
19	2175751	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.272727
19	2175755	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.636364
19	2175759	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.363636
19	2175860	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.230769
19	2175861	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.230769
19	2206084	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.181818
19	2206091	A->G	+	ENSG00000104885	DOT1L	protein_coding	Intergenic	.	.	Alu	0.181818
19	2279273	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.222222
19	2279328	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1875
19	2279386	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.153846
19	2279401	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.142857
19	2280262	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.142857
19	2282989	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2283091	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2283098	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.454545
19	2283973	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2283975	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.866667
19	2284045	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.25
19	2284049	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.5
19	2284081	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.333333
19	2284121	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0714286
19	2284136	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	2293108	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	2293995	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	2297746	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	2302303	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2302313	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.454545
19	2327544	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.117647
19	3138078	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.181818
19	3139405	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.125
19	3141538	A->G	+	ENSG00000060558	GNA15	protein_coding	Intergenic	.	.	Alu	0.125
19	3181296	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	3194328	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.166667
19	3194368	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.0952381
19	3194815	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.125
19	3194896	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.222222
19	3194927	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.1
19	3194974	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.157895
19	3194993	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.294118
19	3194996	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.8125
19	3194997	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.2
19	3195031	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.0909091
19	3195053	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.947368
19	3195059	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.3125
19	3195067	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.176471
19	3195103	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.5
19	3195114	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.533333
19	3195164	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.473684
19	3195167	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.666667
19	3195293	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.181818
19	3195511	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.363636
19	3195532	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.2
19	3195647	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.133333
19	3195651	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.133333
19	3195653	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.533333
19	3206626	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.2
19	3206635	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.3
19	3206649	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.2
19	3518108	A->G	+	ENSG00000105325	FZR1	protein_coding	Intergenic	.	.	Alu	0.5
19	3518115	A->G	+	ENSG00000105325	FZR1	protein_coding	Intergenic	.	.	Alu	0.2
19	3540205	A->G	+	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.166667
19	3540227	A->G	+	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.25
19	3540233	A->G	+	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.181818
19	3758419	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.25
19	3758455	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.181818
19	3758463	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.181818
19	3758531	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.166667
19	3758532	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.166667
19	3758970	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.166667
19	3758987	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.166667
19	3759029	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.272727
19	3759153	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.416667
19	3759177	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.235294
19	4035892	A->G	-	ENSG00000105229	PIAS4	protein_coding	Intergenic	.	.	Alu	0.384615
19	4049326	A->G	-	ENSG00000178951	ZBTB7A	protein_coding	Intergenic	.	.	Alu	0.214286
19	4050006	A->G	-	ENSG00000178951	ZBTB7A	protein_coding	Intergenic	.	.	Alu	0.117647
19	4262761	A->G	+	ENSG00000105248	YJU2	protein_coding	Intergenic	.	.	Alu	0.181818
19	4270447	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	4420443	A->G	+	ENSG00000167670	CHAF1A	protein_coding	Intergenic	.	.	Alu	0.181818
19	4420464	A->G	+	ENSG00000167670	CHAF1A	protein_coding	Intergenic	.	.	Alu	0.2
19	4421213	A->G	+	ENSG00000167670	CHAF1A	protein_coding	Intergenic	.	.	Alu	0.153846
19	4421326	A->G	+	ENSG00000167670	CHAF1A	protein_coding	Intergenic	.	.	Alu	0.545455
19	4422110	A->G	+	ENSG00000167670	CHAF1A	protein_coding	Intergenic	.	.	Alu	0.2
19	4433862	A->G	+	ENSG00000167670	CHAF1A	protein_coding	Intergenic	.	.	Alu	0.166667
19	4686999	A->G	-	ENSG00000142002	DPP9	protein_coding	Intergenic	.	.	Alu	0.5
19	4855767	A->G	-	ENSG00000105355	PLIN3	protein_coding	Intergenic	.	.	Alu	0.166667
19	4855775	A->G	-	ENSG00000105355	PLIN3	protein_coding	Intergenic	.	.	Alu	0.230769
19	4913027	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.153846
19	4915512	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.192308
19	4915550	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0833333
19	4915556	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	4915658	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	4916190	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.3
19	5594790	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0952381
19	5596008	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0769231
19	5596019	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.652174
19	5596080	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.125
19	5596083	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.857143
19	5596093	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.153846
19	5596119	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.5
19	5596139	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.269231
19	5596154	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.206897
19	5596155	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0689655
19	5596163	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0689655
19	5596180	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0869565
19	5596227	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.166667
19	5596389	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.135135
19	5596391	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.162162
19	5596392	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0857143
19	5596397	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0526316
19	5596411	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0526316
19	5596469	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.115385
19	5596516	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.117647
19	5596518	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.222222
19	5596520	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.125
19	5596526	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.375
19	5596560	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.142857
19	5596562	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.142857
19	5596586	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	5596615	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.114286
19	5596622	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0555556
19	5615111	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.153846
19	5629001	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.222222
19	5629921	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.181818
19	5654607	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.3
19	5654615	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.2
19	5654683	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.15
19	5654713	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.125
19	5655203	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.166667
19	5655327	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.230769
19	5655381	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.454545
19	5657654	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.2
19	5658218	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.176471
19	5658233	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.1
19	5661964	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.181818
19	5661986	A->G	+	ENSG00000160633	SAFB	protein_coding	Intergenic	.	.	Alu	0.363636
19	5710113	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.181818
19	5710169	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.5
19	5710597	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.2
19	5710624	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.181818
19	5710629	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.333333
19	5710644	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.176471
19	5710913	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.2
19	5710914	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.3
19	5710917	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.1
19	5710926	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.105263
19	5710933	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.35
19	5710957	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.235294
19	5710974	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.357143
19	5911306	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	5911318	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.333333
19	5911325	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.105263
19	5911351	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.5
19	5911355	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.105263
19	5956008	A->G	-	ENSG00000031823	RANBP3	protein_coding	Intergenic	.	.	Alu	0.2
19	7398345	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.133333
19	7398351	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.4
19	7402272	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.166667
19	7408037	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	7408093	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.25
19	7408103	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.153846
19	7408260	A->G	+	ENSG00000268861	AC008878.3	protein_coding	Intergenic	.	.	Alu	0.125
19	7964632	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.111111
19	7975933	A->G	-	ENSG00000066044	ELAVL1	protein_coding	Intergenic	.	.	Alu	0.2
19	8472050	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.2
19	8472065	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.25
19	8472682	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.181818
19	8472700	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.461538
19	8472722	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.181818
19	8472825	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.230769
19	8473072	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.1
19	8473100	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.102564
19	8473108	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.119048
19	8473150	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.288889
19	8473314	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0952381
19	8479155	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.368421
19	8479186	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.105263
19	8479520	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.1
19	8479564	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.0869565
19	8479584	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.32
19	8480513	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.181818
19	8480545	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.363636
19	8497352	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
19	8497357	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
19	8497427	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.117647
19	8497471	A->G	-	ENSG00000133246	PRAM1	protein_coding	Intergenic	.	.	Alu	0.166667
19	9432052	A->G	-	ENSG00000174652	ZNF266	protein_coding	Intergenic	.	.	Alu	0.166667
19	9432084	A->G	-	ENSG00000174652	ZNF266	protein_coding	Intergenic	.	.	Alu	0.157895
19	9583398	A->G	-	ENSG00000197961	ZNF121	protein_coding	Intergenic	.	.	Alu	0.2
20	1145106	A->G	+	ENSG00000125818	PSMF1	protein_coding	Intergenic	.	.	Alu	0.25
20	2117459	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.8
20	2117544	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.2
20	2117574	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.181818
20	2117584	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.133333
20	2117590	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.133333
20	2117645	A->G	+	ENSG00000125834	STK35	protein_coding	Intergenic	.	.	Alu	0.533333
20	2793314	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
20	2877533	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.125
20	2878237	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.153846
20	2878245	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.692308
20	2878293	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.153846
20	2879947	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.1875
20	2880759	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.105263
20	2881854	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.125
20	2881858	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.1875
20	2881879	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.416667
20	2881885	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.333333
20	2882473	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.153846
20	2882490	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.125
20	2882493	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.466667
20	2882530	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.0909091
20	2882555	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.130435
20	2882556	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.0833333
20	2882570	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.0869565
20	2924231	A->G	+	ENSG00000132670	PTPRA	protein_coding	Intergenic	.	.	Alu	0.2
20	3151020	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.111111
20	3151026	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.157895
20	3153873	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.25
20	3157069	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.105263
20	3188491	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
20	3913473	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.166667
20	3913483	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.2
20	3919049	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.230769
20	3919147	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.166667
20	3919180	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.25
20	3920437	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.2
20	3961208	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.461538
20	3961253	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3961254	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.153846
20	3961290	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.25
20	3961302	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3961307	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.272727
20	3962234	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.333333
20	3962244	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.363636
20	3962292	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3962294	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.4
20	3962297	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	3962904	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3962938	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.416667
20	3962965	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3962973	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.181818
20	3982842	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	4001016	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.363636
20	4001046	A->G	-	ENSG00000101236	RNF24	protein_coding	Intergenic	.	.	Alu	0.2
20	4793700	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.2
20	4794256	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.307692
20	4794259	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.214286
20	4794702	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.615385
20	4968781	A->G	-	ENSG00000089057	SLC23A2	protein_coding	Intergenic	.	.	Alu	0.25
20	4970628	A->G	-	ENSG00000089057	SLC23A2	protein_coding	Intergenic	.	.	Alu	0.2
20	5129703	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.117647
20	5129704	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.117647
20	5129840	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.0769231
20	5129841	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.115385
20	5129848	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.153846
20	5130112	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.307692
20	5130837	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.166667
20	5133597	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.6
20	5139165	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.181818
20	5139337	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.142857
20	5142113	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.2
20	5152026	A->G	+	ENSG00000101290	CDS2	protein_coding	Intergenic	.	.	Alu	0.181818
20	5555293	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.115385
20	5555354	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.4
20	5563620	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5564779	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5573016	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.25
20	5573178	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.3125
20	5573686	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.333333
20	5573709	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5589367	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.130435
20	5589446	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.222222
20	5589449	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0689655
20	5589480	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.12
20	5589512	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.269231
20	5589536	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.12
20	5589600	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.136364
20	5602739	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5602936	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5602941	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5602944	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.545455
20	8260148	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.181818
20	8260150	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.416667
20	8260181	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.230769
20	8260184	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.307692
20	8409563	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
20	8409602	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.142857
20	8409715	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.153846
20	8409725	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.133333
20	8427163	A->G	+	ENSG00000182621	PLCB1	protein_coding	Intergenic	.	.	Alu	0.2
21	8446047	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	10417746	A->G	+	ENSG00000142657	PGD	protein_coding	Intergenic	.	.	Alu	0.153846
1	10542743	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.2
1	10543865	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.181818
1	10543874	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.285714
1	10543876	A->G	+	ENSG00000142655	PEX14	protein_coding	Intergenic	.	.	Alu	0.285714
1	11020729	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.181818
1	11020860	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.153846
1	11020869	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.111111
1	11021256	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.133333
1	11021268	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.214286
1	11021530	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.173913
1	11021540	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.0869565
1	11021667	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.111111
1	11021734	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.181818
1	11021885	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.444444
1	11021891	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.12
1	11027960	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.2
1	11027975	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.133333
1	11028143	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.133333
1	11028163	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.235294
1	11028166	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.117647
1	11028176	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.333333
1	11029346	A->G	+	ENSG00000277726	AL109811.4	protein_coding	Intergenic	.	.	Alu	0.222222
1	11073404	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.5
1	11078025	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.5
1	11078028	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.2
1	11089832	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.133333
1	11089861	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.1875
1	11089862	A->G	-	ENSG00000171824	EXOSC10	protein_coding	Intergenic	.	.	Alu	0.125
1	12001150	A->G	+	ENSG00000116688	MFN2	protein_coding	Intergenic	.	.	Alu	0.2
1	12254261	A->G	+	ENSG00000048707	VPS13D	protein_coding	Intergenic	.	.	Alu	0.5
1	12254333	A->G	+	ENSG00000048707	VPS13D	protein_coding	Intergenic	.	.	Alu	0.307692
1	12255673	A->G	+	ENSG00000048707	VPS13D	protein_coding	Intergenic	.	.	Alu	0.153846
1	12256127	A->G	+	ENSG00000048707	VPS13D	protein_coding	Intergenic	.	.	Alu	0.3
1	12256128	A->G	+	ENSG00000048707	VPS13D	protein_coding	Intergenic	.	.	Alu	0.157895
1	13755821	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	13767366	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	13767535	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	13767574	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.111111
1	13767720	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.0666667
1	13767748	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.483871
1	13767765	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	13767808	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.210526
1	13767811	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.1875
1	13767824	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.117647
1	13767854	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.655172
1	13767868	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.692308
1	13767891	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.0606061
1	13767901	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.534884
1	13767917	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.0434783
1	13767921	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.047619
1	13767931	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.216216
1	13768454	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.166667
1	13768480	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.230769
1	13768505	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.2
1	13768506	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.214286
1	13768545	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.416667
1	13768560	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	13768612	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.25
1	16369809	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.25
1	16369814	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.2
1	16373838	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.142857
1	16375574	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.117647
1	16377478	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.454545
1	16442690	A->G	+	ENSG00000157191	NECAP2	protein_coding	Intergenic	.	.	Alu	0.222222
1	16442726	A->G	+	ENSG00000157191	NECAP2	protein_coding	Intergenic	.	.	Alu	0.35
1	16442746	A->G	+	ENSG00000157191	NECAP2	protein_coding	Intergenic	.	.	Alu	0.333333
1	16445216	A->G	+	ENSG00000157191	NECAP2	protein_coding	Intergenic	.	.	Alu	0.3
1	16445754	A->G	+	ENSG00000157191	NECAP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	16446364	A->G	+	ENSG00000157191	NECAP2	protein_coding	Intergenic	.	.	Alu	0.363636
1	16447122	A->G	+	ENSG00000157191	NECAP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	16460698	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
1	16460704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
1	16514093	A->G	-	.	.	.	Intergenic	.	.	Alu	0.625
1	16624529	A->G	-	ENSG00000215908	CROCCP2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
1	17003891	A->G	-	ENSG00000226526	AL049569.1	antisense	Intergenic	.	.	Alu	0.2
1	17003913	A->G	-	ENSG00000226526	AL049569.1	antisense	Intergenic	.	.	Alu	0.2
1	17037723	A->G	-	ENSG00000117118	SDHB	protein_coding	Intergenic	.	.	Alu	0.4
1	17413874	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0897436
1	17413914	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0212766
1	17414273	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0392157
1	17414279	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0377358
1	17414295	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0327869
1	17414366	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.04
1	17414406	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0425532
1	17414447	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0731707
1	17414454	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.242424
1	17414674	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.114754
1	17414721	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0384615
1	17414724	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.465517
1	17414729	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0508475
1	17414737	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.107143
1	17414760	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.111111
1	17414764	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0344828
1	17414770	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0892857
1	17414777	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0545455
1	17414795	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0350877
1	17414798	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0847458
1	17414799	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0327869
1	17414800	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.145161
1	17414801	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0967742
1	17414809	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.04
1	17414829	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0350877
1	17414841	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.107692
1	17414862	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.104478
1	17414889	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.536232
1	17414892	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.285714
1	17414893	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.191176
1	17414909	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.125
1	17414927	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0540541
1	17415447	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0571429
1	17415454	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0465116
1	17415487	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.146341
1	17415531	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0961538
1	17415545	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	17415548	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.279412
1	17415562	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0307692
1	17415623	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0483871
1	17415627	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.160714
1	17415628	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0526316
1	17415785	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.195122
1	17415796	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.140845
1	17415803	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0422535
1	17415812	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.101266
1	17415897	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	17415957	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.166667
1	17415986	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.3
1	17418277	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.157895
1	19131630	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.2
1	19131829	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.4
1	19180326	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.4
1	19181279	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.294118
1	19181308	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.105263
1	19181363	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.7
1	19332577	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	19337149	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	19467110	A->G	-	ENSG00000077549	CAPZB	protein_coding	Intergenic	.	.	Alu	0.181818
1	19474078	A->G	-	ENSG00000077549	CAPZB	protein_coding	Intergenic	.	.	Alu	0.142857
1	19474134	A->G	-	ENSG00000077549	CAPZB	protein_coding	Intergenic	.	.	Alu	0.230769
1	19474140	A->G	-	ENSG00000077549	CAPZB	protein_coding	Intergenic	.	.	Alu	0.125
1	20756763	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0588235
1	20756884	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0833333
1	20758852	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.294118
1	20758925	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.217391
1	20758926	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	20758948	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20760159	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	20761205	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.142857
1	20761240	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.133333
1	20764455	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.307692
1	20764459	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.285714
1	20764813	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	20764823	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.142857
1	20764834	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.363636
1	20769354	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20769355	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20775406	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	20775410	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.45
1	20782977	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.111111
1	20783384	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	20783538	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.333333
1	20784086	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.272727
1	20784108	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.235294
1	20784134	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.117647
1	20784197	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	20784999	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.105263
1	20785013	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.105263
1	20785061	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.214286
1	21149026	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.181818
1	21162327	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.2
1	21173680	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.545455
1	21173682	A->G	-	ENSG00000075151	EIF4G3	protein_coding	Intergenic	.	.	Alu	0.454545
1	21323514	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.117647
1	21331397	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.181818
1	21331450	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.142857
1	21331457	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.133333
1	21775492	A->G	-	ENSG00000090686	USP48	protein_coding	Intergenic	.	.	Alu	0.181818
1	22055058	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.2
1	22055083	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.2
1	22058601	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.133333
1	22060258	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.266667
1	22060259	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.266667
1	22064909	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0952381
1	22066246	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.2
1	22066906	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.117647
1	22066916	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.117647
1	22066932	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.157895
1	22066943	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.125
1	22066960	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.111111
1	22067446	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0625
1	22068057	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.0714286
1	22073848	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.166667
1	22073889	A->G	+	ENSG00000070831	CDC42	protein_coding	Intergenic	.	.	Alu	0.117647
1	23021476	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.272727
1	23025944	A->G	+	ENSG00000004487	KDM1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	23120639	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	23139891	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.2
1	23145003	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	23154302	A->G	-	ENSG00000169641	LUZP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	23325929	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0571429
1	23325963	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.333333
1	23325976	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.166667
1	23326008	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.346154
1	23326015	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.481481
1	23326025	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.12
1	23326068	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.291667
1	23326106	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0740741
1	23326142	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0689655
1	23326147	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0645161
1	23326154	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.09375
1	23326702	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.133333
1	23326733	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.125
1	23326746	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.111111
1	23327437	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.258065
1	23327443	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.115385
1	23327458	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0967742
1	23327483	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.09375
1	23327484	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0625
1	23327485	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.162162
1	23327503	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.315789
1	23327516	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.130435
1	23327566	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.142857
1	23327590	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.1
1	23327607	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.105263
1	23327621	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.1
1	23327627	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.111111
1	23327633	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.111111
1	23328718	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23328859	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.272727
1	23328862	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23328897	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.190476
1	23328898	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.15
1	23328916	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.277778
1	23328991	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.136364
1	23328999	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0869565
1	23329008	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0769231
1	23329021	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.423077
1	23329069	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.111111
1	23329085	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.173913
1	23329704	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0425532
1	23329735	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.09375
1	23329756	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.136364
1	23329796	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.115385
1	23329834	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.117647
1	23329862	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.0952381
1	23329877	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.136364
1	23329903	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.333333
1	23329904	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.16129
1	23330452	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.25
1	23330496	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.142857
1	23337414	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.230769
1	23337415	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.153846
1	23337428	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.105263
1	23968743	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	1
1	23972105	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.5625
1	23972829	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	1
1	23972880	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.181818
1	23972958	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.133333
1	23972959	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.133333
1	23973607	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.133333
1	23974359	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.416667
1	23974649	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.1
1	23974663	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.352941
1	23974707	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.133333
1	23974745	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.0833333
1	23974766	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.0952381
1	23974772	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.210526
1	24663712	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.428571
1	24663717	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.166667
1	24663718	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.166667
1	24663730	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.133333
1	24663832	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.454545
1	24762363	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.153846
1	24824367	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.2
1	24824371	A->G	+	ENSG00000169504	CLIC4	protein_coding	Intergenic	.	.	Alu	0.2
1	24908133	A->G	-	ENSG00000020633	RUNX3	protein_coding	Intergenic	.	.	Alu	0.1875
1	25346525	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.0869565
1	25346529	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.238095
1	25346634	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.2
1	25346635	A->G	+	ENSG00000183726	TMEM50A	protein_coding	Intergenic	.	.	Alu	0.2
1	25437204	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.272727
1	25437237	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.153846
1	25437366	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.1875
1	25437391	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.125
1	25437404	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.5
1	25437422	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.142857
1	25437800	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.166667
1	25444642	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.166667
1	25444650	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.384615
1	25444716	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.4
1	25444729	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.2
1	25444846	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.133333
1	25444854	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.153846
1	25445244	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.3
1	25448272	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	25449605	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.192308
1	25449606	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.08
1	25453105	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.307692
1	25453140	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.636364
1	25453147	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.5
1	25454656	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.214286
1	25454684	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.333333
1	25454734	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.190476
1	25454743	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.181818
1	25454744	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.173913
1	25456005	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.2
1	25456026	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.125
1	25456049	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0714286
1	25456071	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.115385
1	25456072	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	25456074	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.16
1	25456093	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.25
1	25456098	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.3125
1	25456111	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.125
1	25456151	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.176471
1	25456210	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.117647
1	25456238	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.117647
1	25456253	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.133333
1	25479661	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.384615
1	25496281	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.2
1	25496337	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.2
1	25987635	A->G	-	ENSG00000158006	PAFAH2	protein_coding	Intergenic	.	.	Alu	0.166667
1	26563329	A->G	+	ENSG00000117676	RPS6KA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	26704589	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.818182
1	26704679	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	26704706	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.2
1	26705231	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.5
1	26705238	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.363636
1	26705304	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	26705312	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.461538
1	26705414	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	26709727	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.1
1	26709756	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.1
1	26711132	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.230769
1	26711212	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.125
1	26711246	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.136364
1	26711303	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.125
1	26711343	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.166667
1	26711850	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.117647
1	26711943	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.1875
1	26711996	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.388889
1	26712408	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0909091
1	26712413	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.12
1	26712423	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0833333
1	26712503	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.142857
1	26712568	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26712679	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.105263
1	26712686	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.105263
1	26714440	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.214286
1	26714478	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.266667
1	26714514	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.125
1	26714558	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.133333
1	26714582	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.285714
1	26714617	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26714651	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.125
1	26715750	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.125
1	26715753	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.0740741
1	26720658	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.181818
1	26777494	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26777497	A->G	+	ENSG00000117713	ARID1A	protein_coding	Intergenic	.	.	Alu	0.153846
1	26843212	A->G	+	ENSG00000204160	ZDHHC18	protein_coding	Intergenic	.	.	Alu	0.8
1	26843242	A->G	+	ENSG00000204160	ZDHHC18	protein_coding	Intergenic	.	.	Alu	0.181818
1	26843243	A->G	+	ENSG00000204160	ZDHHC18	protein_coding	Intergenic	.	.	Alu	0.272727
1	26847782	A->G	+	ENSG00000204160	ZDHHC18	protein_coding	Intergenic	.	.	Alu	0.153846
1	26880380	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.25
1	26880385	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.25
1	26880410	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.181818
1	26880441	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.272727
1	26880451	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.3
1	26880739	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	26880756	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.08
1	26880761	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	26881611	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.105263
1	26881617	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.25
1	26882105	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.181818
1	26882134	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.181818
1	26882178	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.2
1	26882284	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.142857
1	26882301	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.230769
1	26882363	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.111111
1	26882364	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.111111
1	26883701	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.117647
1	26883784	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.2
1	26883928	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.181818
1	27462957	A->G	-	ENSG00000158195	WASF2	protein_coding	Intergenic	.	.	Alu	0.272727
1	27462958	A->G	-	ENSG00000158195	WASF2	protein_coding	Intergenic	.	.	Alu	0.181818
1	27462964	A->G	-	ENSG00000158195	WASF2	protein_coding	Intergenic	.	.	Alu	0.272727
1	27479831	A->G	-	ENSG00000158195	WASF2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27874416	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27874454	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.266667
1	27874455	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.133333
1	27874526	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.454545
1	27874527	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.181818
1	27874833	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27874834	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27874837	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	27874859	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.115385
1	27874873	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.185185
1	27874876	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.214286
1	27875078	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.105263
1	27875079	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.105263
1	27875083	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.1875
1	27875964	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.15
1	27880982	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.3
1	27881421	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.222222
1	28506285	A->G	+	ENSG00000180198	RCC1	protein_coding	Intergenic	.	.	Alu	0.0714286
1	28506324	A->G	+	ENSG00000180198	RCC1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	28679388	A->G	+	ENSG00000162419	GMEB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	28892541	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.153846
1	28892545	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.153846
1	28892594	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.117647
1	28892621	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.6
1	28892640	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.125
1	28893323	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.214286
1	28893345	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.157895
1	28897300	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.153846
1	28897307	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.181818
1	28918770	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.153846
1	28925347	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.333333
1	28925350	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.277778
1	28925373	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.1
1	29112278	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.2
1	29174103	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.181818
1	29174106	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.363636
1	29174107	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.272727
1	29174137	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.3
1	29174179	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.2
1	29174704	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.333333
1	29174798	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.454545
1	29174802	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.166667
1	29174812	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.166667
1	29174838	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.4
1	29174947	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.357143
1	29175247	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0967742
1	29175291	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0465116
1	29175301	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0512821
1	29175304	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0869565
1	29175305	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.136364
1	29175330	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0571429
1	29175439	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.272727
1	29175996	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.166667
1	29176008	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.173913
1	29176009	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0869565
1	29176010	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0869565
1	29176063	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.428571
1	29176166	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.166667
1	29176169	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.181818
1	29176170	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.181818
1	29179462	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0217391
1	30743974	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.162791
1	30743982	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.194444
1	30743984	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.142857
1	30997833	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.0714286
1	30999036	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	30999092	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.4
1	30999103	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	30999168	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	30999231	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.222222
1	30999272	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31014181	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31019168	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.153846
1	31019349	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31026002	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.75
1	31026144	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.230769
1	31026225	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.357143
1	31039713	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
1	31044740	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.25
1	31045258	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31046303	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.153846
1	31046586	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.181818
1	31046993	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.142857
1	31047042	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.153846
1	31047106	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31049597	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.153846
1	31050237	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.25
1	31050328	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.111111
1	31050363	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.105263
1	31050398	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.238095
1	31053171	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.181818
1	31053175	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.2
1	31053994	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.181818
1	31054011	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.230769
1	31054042	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.3
1	31262275	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.5
1	31262276	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.4
1	31262303	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.166667
1	31262761	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.4
1	31265155	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.333333
1	31265160	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.133333
1	31265356	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.117647
1	31265403	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.125
1	31267621	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.266667
1	31267646	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.2
1	31284101	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.166667
1	31284286	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.4
1	31290307	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.2
1	31291476	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.2
1	31919892	A->G	-	ENSG00000269967	AL136115.2	lincRNA	Intergenic	.	.	Alu	0.142857
1	31922240	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.2
1	31933227	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intergenic	.	.	Alu	0.5
1	31933586	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intergenic	.	.	Alu	0.307692
1	31933591	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intergenic	.	.	Alu	0.153846
1	31933597	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intergenic	.	.	Alu	0.2
1	31935905	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	31936062	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.2
1	31936299	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.1
1	31936314	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.136364
1	31936317	A->G	-	ENSG00000184007	PTP4A2	protein_coding	Intergenic	.	.	Alu	0.166667
1	32019911	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.2
1	32048239	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.111111
1	32048449	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.142857
1	32048454	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.285714
1	32050754	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.285714
1	32053648	A->G	+	ENSG00000121774	KHDRBS1	protein_coding	Intergenic	.	.	Alu	0.111111
1	32113308	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.181818
1	32113314	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.272727
1	32115677	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.125
1	32118526	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.363636
1	32126154	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.181818
1	32133237	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.153846
1	32133250	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.2
1	32164954	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.153846
1	32165608	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.111111
1	32167716	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.166667
1	32168424	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.3
1	32169105	A->G	+	ENSG00000025800	KPNA6	protein_coding	Intergenic	.	.	Alu	0.25
1	32223565	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.142857
1	32369447	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.166667
1	32369465	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.307692
1	32370177	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.333333
1	32370179	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.277778
1	32379693	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.230769
1	32379729	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.166667
1	32389735	A->G	-	ENSG00000160058	BSDC1	protein_coding	Intergenic	.	.	Alu	0.166667
1	32561665	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	Intergenic	.	.	Alu	0.363636
1	32654144	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.416667
1	32654148	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.142857
1	32654163	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.25
1	32656295	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.166667
1	32657137	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.181818
1	32658127	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.153846
1	32658640	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.181818
1	32662069	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.5
1	32664655	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.125
1	32665516	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.2
1	32673635	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.153846
1	32673658	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	32673935	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.125
1	32673954	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.190476
1	32673980	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.380952
1	32673986	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.111111
1	32674346	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.454545
1	32674351	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.2
1	32674360	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.181818
1	32674363	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.2
1	32674373	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.2
1	32674821	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.142857
1	32674861	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.230769
1	32675956	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intergenic	.	.	Alu	0.142857
1	32788389	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.181818
1	32813421	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.166667
1	32813447	A->G	-	ENSG00000134684	YARS	protein_coding	Intergenic	.	.	Alu	0.4
1	35014420	A->G	-	ENSG00000271741	AC114490.2	protein_coding	Intergenic	.	.	Alu	0.222222
1	35811085	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.166667
1	35812666	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.133333
1	35812678	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.166667
1	35812685	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.25
1	35812692	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.153846
1	35820631	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.2
1	35827122	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.3
1	35835331	A->G	+	ENSG00000134698	AGO4	protein_coding	Intergenic	.	.	Alu	0.2
1	35947972	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.266667
1	35947976	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.411765
1	35947977	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.117647
1	35956923	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.2
1	35957164	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.166667
1	35957203	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.166667
1	35976135	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.111111
1	35976178	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.0833333
1	35978454	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.266667
1	35978466	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.117647
1	36177385	A->G	+	ENSG00000116871	MAP7D1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	36177440	A->G	+	ENSG00000116871	MAP7D1	protein_coding	Intergenic	.	.	Alu	0.2
1	36177445	A->G	+	ENSG00000116871	MAP7D1	protein_coding	Intergenic	.	.	Alu	0.133333
1	36226521	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	36228638	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.0714286
1	36228902	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.333333
1	36228925	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	36229141	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.2
1	36229154	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.133333
1	36229191	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	36229198	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.125
1	36233645	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.363636
1	36234089	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	36234136	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.176471
1	36235014	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.3
1	36235023	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	36237705	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.2
1	36237721	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.222222
1	36237848	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	36237934	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	36237952	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.2
1	36238182	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	36238237	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.214286
1	36253879	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	36478588	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.666667
1	36478603	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.181818
1	36478645	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.230769
1	37547693	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.388889
1	37547703	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.466667
1	37549497	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.454545
1	37550928	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	37551032	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.4
1	37578632	A->G	-	ENSG00000134697	GNL2	protein_coding	Intergenic	.	.	Alu	0.5
1	37579639	A->G	-	ENSG00000134697	GNL2	protein_coding	Intergenic	.	.	Alu	0.142857
1	37586391	A->G	-	ENSG00000134697	GNL2	protein_coding	Intergenic	.	.	Alu	0.272727
1	37992904	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	37993177	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
1	37993178	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	37993202	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	37993787	A->G	-	.	.	.	Intergenic	.	.	Alu	0.615385
1	37993804	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
1	37993835	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	37994694	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	38993364	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	38994014	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.272727
1	38995883	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.235294
1	38995884	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.176471
1	38995914	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.142857
1	38995919	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.26087
1	38995954	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.25
1	38995966	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.217391
1	38995980	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	38996199	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
1	38996224	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.272727
1	38996234	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
1	38996260	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.272727
1	38996337	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.2
1	38996346	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.25
1	38996347	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
1	38996348	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
1	38996711	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.307692
1	38996736	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.5
1	38996741	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.142857
1	38996781	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.238095
1	38998763	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.181818
1	38998786	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.181818
1	39000119	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.111111
1	39031402	A->G	+	ENSG00000168653	NDUFS5	protein_coding	Intergenic	.	.	Alu	0.166667
1	40043259	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	40043291	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.230769
1	40043667	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	40043686	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	40043706	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.25
1	40043756	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.454545
1	40051294	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	40053699	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	40196753	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.105263
1	40196775	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.105263
1	40203381	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.3
1	40203383	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.2
1	40203454	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.166667
1	40205268	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.384615
1	40205291	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.3
1	40228867	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.105263
1	40229860	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.166667
1	40229929	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.153846
1	40376203	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0307692
1	40377085	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0576923
1	40377139	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0322581
1	40377171	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0588235
1	40377179	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0555556
1	40377243	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0449438
1	40377280	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0246914
1	40377283	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.04
1	40377284	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0266667
1	40378142	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0434783
1	40378144	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.122449
1	40378146	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0625
1	40378194	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.230769
1	40378241	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.2
1	40378263	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0327869
1	40378500	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.030303
1	40378502	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	40378527	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.155844
1	40378564	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0224719
1	40379224	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.025641
1	40379234	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0273973
1	40379673	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0545455
1	40379676	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0566038
1	40392817	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.208333
1	40393639	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.117647
1	40393646	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	40393701	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.176471
1	40393711	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.136364
1	40393820	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.05
1	40398285	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0540541
1	40398724	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.375
1	40398725	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.1875
1	40398739	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.166667
1	40398756	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	40399056	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.3
1	40399088	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.2
1	40399168	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.153846
1	40399170	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.153846
1	40399422	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.115385
1	40399434	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	40402476	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0857143
1	40402489	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.216216
1	40402514	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.133333
1	40402554	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	40402579	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.533333
1	40402591	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.117647
1	40402595	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.1875
1	40402634	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.133333
1	40403844	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0952381
1	40715479	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.4
1	40999968	A->G	+	ENSG00000171793	CTPS1	protein_coding	Intergenic	.	.	Alu	0.0697674
1	42183030	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.181818
1	42183058	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.6
1	42237186	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.3
1	42290075	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.285714
1	42290076	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.428571
1	42290130	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.214286
1	42300656	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.357143
1	42300701	A->G	-	ENSG00000198815	FOXJ3	protein_coding	Intergenic	.	.	Alu	0.272727
1	42690125	A->G	+	ENSG00000065978	YBX1	protein_coding	Intergenic	.	.	Alu	0.133333
1	43662174	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.173913
1	43662557	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.5
1	43663819	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.2
1	43663886	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.285714
1	43663902	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.266667
1	43664311	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.5
1	43664312	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.363636
1	43664317	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.333333
1	43664329	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.153846
1	43664353	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.133333
1	43672250	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.133333
1	44427755	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.363636
1	44432985	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44433761	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44444510	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44444515	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44449665	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.166667
1	44465490	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.3
1	44468901	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.181818
1	44629628	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44629636	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	44629654	A->G	+	ENSG00000187147	RNF220	protein_coding	Intergenic	.	.	Alu	0.2
1	45631365	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.142857
1	45631401	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.416667
1	45631403	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45631414	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45657454	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	45657474	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.115385
1	45657611	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.0588235
1	45657619	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45657635	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.121212
1	45657679	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	45657685	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.16
1	45657753	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.133333
1	45657766	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.117647
1	45657817	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.190476
1	45658747	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.111111
1	45659477	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	45664156	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45665168	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.5
1	45665181	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45669005	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.4
1	45671388	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45675584	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.2
1	45675617	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.4
1	45675660	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.153846
1	45675678	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.411765
1	45675717	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
1	45677481	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.1875
1	51241289	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.142857
1	51242397	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.166667
1	51242420	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.142857
1	51242677	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.642857
1	51243673	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.166667
1	51243677	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.166667
1	51245209	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.133333
1	51246417	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.133333
1	51246479	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.166667
1	51246666	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.3
1	51247293	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.416667
1	51247310	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.214286
1	51247316	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.176471
1	51247564	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.157895
1	51249292	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.117647
1	51249357	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.1875
1	51249358	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.117647
1	51253924	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.384615
1	51262802	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51263025	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.214286
1	51266592	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.5
1	51266604	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51266697	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.25
1	51266698	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.25
1	51266737	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.3125
1	51266986	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.142857
1	51266993	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.153846
1	51267154	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.2
1	51358234	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.166667
1	51359189	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.214286
1	51424686	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.142857
1	51428610	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.384615
1	51428984	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.166667
1	51428989	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.25
1	51429030	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.5
1	51429126	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.1875
1	51429165	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.44
1	51451238	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.142857
1	51451244	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.166667
1	51452056	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.166667
1	51452321	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.133333
1	51452385	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.125
1	51452403	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.142857
1	51452491	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.08
1	51452496	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.130435
1	51452521	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.185185
1	51459419	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.0588235
1	51507464	A->G	-	ENSG00000085832	EPS15	protein_coding	Intergenic	.	.	Alu	0.181818
1	52066273	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.272727
1	52066274	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.2
1	52066331	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.166667
1	52066333	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.416667
1	52070479	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.230769
1	52070480	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.166667
1	52409347	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.307692
1	52409349	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.148148
1	52409369	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.157895
1	52409415	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.1
1	52409449	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.1
1	52409464	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.117647
1	52410682	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.363636
1	52410730	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.153846
1	52483592	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.333333
1	52483627	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	52483630	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.0869565
1	52493893	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.181818
1	52494568	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.181818
1	52494580	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.272727
1	52507992	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.181818
1	52514054	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.25
1	52514060	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.272727
1	52514215	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.181818
1	52523510	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.25
1	53229807	A->G	-	ENSG00000162385	MAGOH	protein_coding	Intergenic	.	.	Alu	0.333333
1	54035710	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.8
1	54035837	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.2
1	54036099	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.461538
1	54036159	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.307692
1	54036160	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.285714
1	54036205	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.294118
1	54036218	A->G	-	ENSG00000116209	TMEM59	protein_coding	Intergenic	.	.	Alu	0.230769
1	61690235	A->G	-	ENSG00000162604	TM2D1	protein_coding	Intergenic	.	.	Alu	0.2
1	61711978	A->G	-	ENSG00000162604	TM2D1	protein_coding	Intergenic	.	.	Alu	0.166667
1	61718073	A->G	-	ENSG00000162604	TM2D1	protein_coding	Intergenic	.	.	Alu	0.2
1	61718101	A->G	-	ENSG00000162604	TM2D1	protein_coding	Intergenic	.	.	Alu	0.2
1	62449024	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.235294
1	62449145	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	62449160	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	62449852	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	64916790	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.105263
1	64940948	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.227273
1	64950144	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.105263
1	66936472	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.117647
1	66944946	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	67413944	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.307692
1	67418567	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.2
1	67418593	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	70210401	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.666667
1	70210409	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.25
1	70210488	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.111111
1	70210510	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.588235
1	70210529	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.5
1	70210560	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.2
1	70210561	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.142857
1	70210562	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.333333
1	70210588	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.142857
1	70212398	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.08
1	70212402	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.0869565
1	70212422	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.291667
1	70305090	A->G	-	ENSG00000118454	ANKRD13C	protein_coding	Intergenic	.	.	Alu	0.3
1	77708931	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.4
1	77708945	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.157895
1	77729608	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.4
1	77732836	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.214286
1	77732841	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.133333
1	77732856	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.2
1	77732866	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.125
1	77732890	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.214286
1	77732931	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.6
1	77732932	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.2
1	77732998	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.3
1	77733272	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.785714
1	77733277	A->G	-	ENSG00000077254	USP33	protein_coding	Intergenic	.	.	Alu	0.153846
1	77789271	A->G	+	ENSG00000180488	MIGA1	protein_coding	Intergenic	.	.	Alu	0.2
1	77789410	A->G	+	ENSG00000180488	MIGA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	77789419	A->G	+	ENSG00000180488	MIGA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	77789478	A->G	+	ENSG00000180488	MIGA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	77795452	A->G	+	ENSG00000180488	MIGA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	77950221	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.148148
1	77950229	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.047619
1	77950264	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.129032
1	77950300	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0588235
1	77950317	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.272727
1	77950379	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0545455
1	77950410	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0377358
1	77950411	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.06
1	77952207	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0273973
1	77952903	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0857143
1	77953255	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.160714
1	77953273	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0784314
1	77953324	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0666667
1	77953383	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0677966
1	77953408	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.215686
1	77953428	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0677966
1	77953439	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0731707
1	77953444	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0697674
1	77971764	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.125
1	77971910	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	77971922	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	77973308	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.129032
1	77973351	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	77973369	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.1
1	77973374	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	77973383	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	77974477	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.08
1	77974511	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	77974778	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.130435
1	77977262	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	77977440	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.2
1	77977443	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.5
1	77977444	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.3
1	77977479	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	78650911	A->G	+	ENSG00000137965	IFI44	protein_coding	Intergenic	.	.	Alu	0.157895
1	84148261	A->G	+	ENSG00000142875	PRKACB	protein_coding	Intergenic	.	.	Alu	0.470588
1	84149523	A->G	+	ENSG00000142875	PRKACB	protein_coding	Intergenic	.	.	Alu	0.117647
1	84150193	A->G	+	ENSG00000142875	PRKACB	protein_coding	Intergenic	.	.	Alu	0.25
1	84150196	A->G	+	ENSG00000142875	PRKACB	protein_coding	Intergenic	.	.	Alu	0.181818
1	84209559	A->G	+	ENSG00000142875	PRKACB	protein_coding	Intergenic	.	.	Alu	0.416667
1	84209873	A->G	+	ENSG00000142875	PRKACB	protein_coding	Intergenic	.	.	Alu	0.214286
1	84209940	A->G	+	ENSG00000142875	PRKACB	protein_coding	Intergenic	.	.	Alu	0.714286
1	84931924	A->G	-	ENSG00000153898	MCOLN2	protein_coding	Intergenic	.	.	Alu	0.363636
1	84931967	A->G	-	ENSG00000153898	MCOLN2	protein_coding	Intergenic	.	.	Alu	0.25
1	86376905	A->G	-	ENSG00000122417	ODF2L	protein_coding	Intergenic	.	.	Alu	0.3
1	86378514	A->G	-	ENSG00000122417	ODF2L	protein_coding	Intergenic	.	.	Alu	0.157895
1	86378604	A->G	-	ENSG00000122417	ODF2L	protein_coding	Intergenic	.	.	Alu	0.421053
1	86379069	A->G	-	ENSG00000122417	ODF2L	protein_coding	Intergenic	.	.	Alu	0.533333
1	86379072	A->G	-	ENSG00000122417	ODF2L	protein_coding	Intergenic	.	.	Alu	0.214286
1	86379110	A->G	-	ENSG00000122417	ODF2L	protein_coding	Intergenic	.	.	Alu	0.25
1	88704666	A->G	+	ENSG00000065243	PKN2	protein_coding	Intergenic	.	.	Alu	0.117647
1	88710895	A->G	+	ENSG00000065243	PKN2	protein_coding	Intergenic	.	.	Alu	0.272727
1	88729977	A->G	+	ENSG00000065243	PKN2	protein_coding	Intergenic	.	.	Alu	0.3
1	88734420	A->G	+	ENSG00000065243	PKN2	protein_coding	Intergenic	.	.	Alu	0.636364
1	88744624	A->G	+	ENSG00000065243	PKN2	protein_coding	Intergenic	.	.	Alu	0.333333
1	88855549	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.176471
1	88855852	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.142857
1	88855859	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.15
1	88856090	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.142857
1	88856983	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.2
1	88857096	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.2
1	88858245	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	88866681	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.3
1	88871821	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.111111
1	88871936	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.2
1	88880933	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.142857
1	88880940	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.153846
1	88882092	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.0869565
1	88882113	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.15
1	88885388	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.142857
1	88885724	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.117647
1	88886948	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.153846
1	88887043	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.25
1	89535402	A->G	+	ENSG00000197147	LRRC8B	protein_coding	Intergenic	.	.	Alu	0.125
1	89535421	A->G	+	ENSG00000197147	LRRC8B	protein_coding	Intergenic	.	.	Alu	0.15
1	89535434	A->G	+	ENSG00000197147	LRRC8B	protein_coding	Intergenic	.	.	Alu	0.1
1	89538772	A->G	+	ENSG00000197147	LRRC8B	protein_coding	Intergenic	.	.	Alu	0.285714
1	89538846	A->G	+	ENSG00000197147	LRRC8B	protein_coding	Intergenic	.	.	Alu	0.142857
1	89639187	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.125
1	89640084	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.142857
1	89642638	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.1
1	89642662	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.136364
1	89642666	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.285714
1	89643148	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.272727
1	89643155	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0833333
1	89643156	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0833333
1	89643169	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.380952
1	89643221	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.318182
1	89643228	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0833333
1	89643231	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.0833333
1	89643237	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.217391
1	89643303	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.241379
1	89647946	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.166667
1	89647958	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.125
1	89660333	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.529412
1	89679493	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.1875
1	89680619	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.176471
1	89680630	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.117647
1	89680660	A->G	+	ENSG00000171488	LRRC8C	protein_coding	Intergenic	.	.	Alu	0.142857
1	90913270	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
1	90914596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	90914641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
1	90914666	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
1	90928490	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.125
1	90928595	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0869565
1	90965531	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.210526
1	90965533	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.1875
1	90965777	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0952381
1	90965812	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.266667
1	90966533	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.153846
1	90966546	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.166667
1	90971598	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.142857
1	90972037	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.37037
1	90972038	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.153846
1	90974218	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.121212
1	90984347	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.578947
1	91012354	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.111111
1	91012395	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.142857
1	91012396	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.142857
1	91012426	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.181818
1	91013211	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.0833333
1	91013214	A->G	-	ENSG00000122482	ZNF644	protein_coding	Intergenic	.	.	Alu	0.16
1	92312296	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	92312335	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.25
1	92312345	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.2
1	92313105	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.166667
1	92313129	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.214286
1	92319797	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.117647
1	92319813	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	92319823	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.117647
1	92319834	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.105263
1	92319878	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.238095
1	92319887	A->G	+	ENSG00000122484	RPAP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	92478962	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	92478963	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.125
1	92478994	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.157895
1	92479054	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.535714
1	92479060	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.206897
1	92479061	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.451613
1	92479664	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.4
1	92479684	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.166667
1	92479686	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.333333
1	92479689	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.230769
1	92479741	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.333333
1	92479744	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.384615
1	92479771	A->G	-	ENSG00000162676	GFI1	protein_coding	Intergenic	.	.	Alu	0.5625
1	93155764	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.25
1	93176599	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.2
1	93177334	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.181818
1	93333213	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.0967742
1	93333225	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.0645161
1	93333302	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
1	96726347	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.2
1	96726377	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.25
1	96726857	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.148148
1	96733454	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.133333
1	96745833	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.3
1	96746029	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.166667
1	96788110	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.470588
1	96793449	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	96793450	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	96799425	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.25
1	96799435	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.266667
1	96800568	A->G	+	ENSG00000117569	PTBP2	protein_coding	Intergenic	.	.	Alu	0.210526
2	10308931	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	1
2	10309139	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.181818
2	10309190	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.5
2	10320394	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.5
2	10320540	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.3
2	10320546	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.416667
2	10320554	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.4
2	10321165	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.285714
2	10321233	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.4
2	10321307	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.230769
2	10321334	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.214286
2	10321360	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.1875
2	10322162	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.2
2	10352105	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.272727
2	15607619	A->G	+	ENSG00000079785	DDX1	protein_coding	Intergenic	.	.	Alu	0.2
2	15607744	A->G	+	ENSG00000079785	DDX1	protein_coding	Intergenic	.	.	Alu	0.416667
2	15607764	A->G	+	ENSG00000079785	DDX1	protein_coding	Intergenic	.	.	Alu	0.363636
2	15607769	A->G	+	ENSG00000079785	DDX1	protein_coding	Intergenic	.	.	Alu	0.3
2	20039797	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.133333
2	20039819	A->G	-	ENSG00000068697	LAPTM4A	protein_coding	Intergenic	.	.	Alu	0.277778
2	20266250	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.714286
2	20266251	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.307692
2	20266311	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.1
2	20266315	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.15
2	20266369	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.133333
2	20266382	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20266383	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.111111
2	20266398	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.315789
2	20266399	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.157895
2	20267056	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.272727
2	20268377	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.105263
2	20271386	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.285714
2	20271387	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.307692
2	20271434	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.235294
2	20271478	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.263158
2	20271481	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.105263
2	20271484	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.136364
2	20271586	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.125
2	20271603	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20271914	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.193548
2	20271915	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.0606061
2	20271967	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20271979	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.4
2	20272015	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.5
2	20272047	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.4
2	20272076	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.214286
2	20272083	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.571429
2	20272100	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.105263
2	20272124	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.117647
2	20272149	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20292867	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.416667
2	20307116	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20335062	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.210526
2	20335091	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.142857
2	20335204	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.176471
2	20336323	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.210526
2	20336339	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.133333
2	20336404	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	20338205	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20338269	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.105263
2	20338280	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.105263
2	20342990	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	20343311	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.117647
2	20343685	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.125
2	20343753	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.461538
2	20344103	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20344105	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20344256	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.176471
2	20344284	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20344286	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20344334	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.461538
2	20344815	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.352941
2	20344859	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.272727
2	20345243	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20345249	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.4
2	20345251	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.230769
2	20345382	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	20345383	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.125
2	20345796	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.181818
2	20345809	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20345865	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.230769
2	20345867	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.214286
2	23773015	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
2	23774360	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23791344	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.555556
2	23796016	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
2	23796017	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23829506	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.4
2	23829516	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23829655	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
2	23829699	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23829710	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.3
2	23835701	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23835719	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.3
2	23841471	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.176471
2	23841691	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.111111
2	23841698	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.133333
2	23841915	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.461538
2	23845750	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
2	23849741	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23849745	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
2	23851248	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.3
2	23852837	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
2	23859488	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.363636
2	23862483	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
2	23863307	A->G	-	ENSG00000119778	ATAD2B	protein_coding	Intergenic	.	.	Alu	0.1875
2	23987882	A->G	+	ENSG00000173960	UBXN2A	protein_coding	Intergenic	.	.	Alu	0.2
2	24090899	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.363636
2	24090920	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.7
2	24090926	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.3
2	24090985	A->G	+	ENSG00000219626	FAM228B	protein_coding	Intergenic	.	.	Alu	0.3
2	24257072	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.4
2	24257073	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.2
2	24257099	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.25
2	24257114	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.3
2	24333922	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.133333
2	24334398	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.272727
2	24343428	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.230769
2	24346941	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.166667
2	24511136	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.384615
2	24525800	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.25
2	24531317	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.4
2	24531318	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.454545
2	24540711	A->G	+	ENSG00000084676	NCOA1	protein_coding	Intergenic	.	.	Alu	0.307692
2	26038801	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.272727
2	26039450	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.105263
2	26040537	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.166667
2	26056760	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.133333
2	26285867	A->G	+	ENSG00000138029	HADHB	protein_coding	Intergenic	.	.	Alu	0.4
2	26285877	A->G	+	ENSG00000138029	HADHB	protein_coding	Intergenic	.	.	Alu	0.153846
2	26285903	A->G	+	ENSG00000138029	HADHB	protein_coding	Intergenic	.	.	Alu	0.153846
2	26285904	A->G	+	ENSG00000138029	HADHB	protein_coding	Intergenic	.	.	Alu	0.153846
2	26285952	A->G	+	ENSG00000138029	HADHB	protein_coding	Intergenic	.	.	Alu	0.181818
2	26286000	A->G	+	ENSG00000138029	HADHB	protein_coding	Intergenic	.	.	Alu	0.142857
2	27354276	A->G	-	ENSG00000115207	GTF3C2	protein_coding	Intergenic	.	.	Alu	0.333333
2	28758145	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0740741
2	28758163	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0666667
2	28759260	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28759306	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28763903	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28764232	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28785556	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.186047
2	28785583	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28785602	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.075
2	28785702	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0689655
2	28786136	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.09375
2	28786139	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.15625
2	28786144	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0625
2	28786194	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28787391	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28788975	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0634921
2	28788984	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.056338
2	28788999	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0285714
2	28789243	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0491803
2	28789249	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.114754
2	28789257	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.119403
2	28789260	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.031746
2	28789291	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.173913
2	28789292	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28789355	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28789356	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.15
2	28789357	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28789434	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.222222
2	28789464	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.36
2	28789491	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.392857
2	28789497	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.310345
2	28789662	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.181818
2	28789679	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28789740	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28789782	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.380952
2	28789784	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28789788	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28789808	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28789833	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0675676
2	28789834	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.168831
2	28789849	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0625
2	28789858	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0352941
2	28789859	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0229885
2	28789873	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.04
2	28790017	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.333333
2	28790025	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0925926
2	28790026	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28790066	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.115942
2	28790083	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.030303
2	28790103	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.189189
2	28790104	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.084507
2	28790119	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.025641
2	28790130	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0806452
2	28790133	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0327869
2	28790137	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0350877
2	28790165	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0357143
2	28790191	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28790201	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.152174
2	28790206	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28790213	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.295455
2	28790226	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0512821
2	28790238	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.194444
2	28790433	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.269231
2	28790439	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.148148
2	28790440	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.192308
2	28790457	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0869565
2	28790479	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28790481	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.08
2	28790523	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.08
2	28790574	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.22
2	28790587	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0666667
2	28790601	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0425532
2	28790614	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0925926
2	28791362	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0540541
2	28867374	A->G	-	ENSG00000171103	TRMT61B	protein_coding	Intergenic	.	.	Alu	0.2
2	28919076	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.25
2	28919096	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.166667
2	28919099	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.153846
2	28919100	A->G	+	ENSG00000163811	WDR43	protein_coding	Intergenic	.	.	Alu	0.153846
2	31964979	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.2
2	32000136	A->G	-	ENSG00000162959	MEMO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	32281342	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.2
2	32295652	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.4
2	32295673	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.166667
2	32295721	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.272727
2	32299088	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.2
2	32359805	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.1
2	32362455	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.105263
2	32362457	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.133333
2	32363102	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32363140	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32363149	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.454545
2	32363182	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	32363252	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32363253	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32367771	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	32367773	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	32368495	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32368683	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.363636
2	32368914	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32369630	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.181818
2	32372650	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.142857
2	32372660	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.125
2	32418873	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.2
2	32460377	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.272727
2	32505948	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0882353
2	32506110	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0689655
2	32507252	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0909091
2	32507342	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0625
2	32507351	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0666667
2	32508878	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.3
2	32508981	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.333333
2	32509280	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.416667
2	32509286	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.846154
2	32509334	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.111111
2	32509349	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.4375
2	32509355	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.6
2	32509356	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	1
2	32509484	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.210526
2	32509522	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.1
2	32512470	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.3
2	32520556	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32520738	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.166667
2	32521503	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.272727
2	32523964	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.153846
2	33592608	A->G	-	ENSG00000119812	FAM98A	protein_coding	Intergenic	.	.	Alu	0.3
2	33592612	A->G	-	ENSG00000119812	FAM98A	protein_coding	Intergenic	.	.	Alu	0.2
2	36582363	A->G	-	ENSG00000171055	FEZ2	protein_coding	Intergenic	.	.	Alu	0.2
2	36582367	A->G	-	ENSG00000171055	FEZ2	protein_coding	Intergenic	.	.	Alu	0.235294
2	36583223	A->G	-	ENSG00000171055	FEZ2	protein_coding	Intergenic	.	.	Alu	0.909091
2	36900167	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.363636
2	36900168	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.2
2	36900170	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.3
2	36900727	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.25
2	36904629	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.166667
2	36904635	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.692308
2	36904814	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.2
2	36905255	A->G	-	ENSG00000115808	STRN	protein_coding	Intergenic	.	.	Alu	0.4
2	37111168	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.416667
2	37111245	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.533333
2	37111277	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.545455
2	37117455	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.3
2	37294951	A->G	-	ENSG00000115825	PRKD3	protein_coding	Intergenic	.	.	Alu	0.142857
2	38307533	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.833333
2	38339211	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.181818
2	38356322	A->G	-	ENSG00000119787	ATL2	protein_coding	Intergenic	.	.	Alu	0.153846
2	39061569	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39090499	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.4
2	39090901	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.133333
2	39090934	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.333333
2	39091158	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39100912	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39105376	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.3
2	39116712	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.125
2	39116764	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.5
2	39116768	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.352941
2	39116769	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.117647
2	39117094	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.157895
2	39117105	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.1
2	39117118	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.157895
2	39117132	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.25
2	39117300	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.2
2	39774996	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.4
2	39775062	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.153846
2	39775077	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.25
2	39775196	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.125
2	39775222	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.142857
2	39775243	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.210526
2	42173593	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42173670	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.117647
2	42173671	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.176471
2	42174391	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.157895
2	42175701	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42175709	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.133333
2	42176855	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.133333
2	42178361	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.3
2	42188901	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.615385
2	42189397	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.235294
2	42189414	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.111111
2	42189446	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.1875
2	42191975	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.25
2	42192369	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42192420	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.105263
2	42192514	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.3
2	42192520	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.222222
2	42258464	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.142857
2	42258501	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.142857
2	42258530	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42258540	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	42258586	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.111111
2	42258628	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.117647
2	42259037	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	42259100	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.142857
2	42259199	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42259234	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.105263
2	42259235	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.222222
2	42268714	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.0606061
2	42272844	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	42281227	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	42282494	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42282506	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.6
2	42282511	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.307692
2	42282519	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.363636
2	42282533	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.333333
2	42282541	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.176471
2	42282569	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.206897
2	42282592	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.0625
2	42282640	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.387097
2	42290463	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42293210	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.307692
2	42293870	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.363636
2	42293871	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42293872	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42293883	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.272727
2	42294611	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42294616	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42294617	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42308344	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.25
2	42308361	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42308383	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	42308389	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.153846
2	42308435	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.153846
2	42311468	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	43966999	A->G	-	ENSG00000138095	LRPPRC	protein_coding	Intergenic	.	.	Alu	0.3
2	44171687	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	44174999	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.285714
2	44175000	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.214286
2	44175206	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.4
2	44175885	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.473684
2	44175889	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.210526
2	44175915	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1875
2	44175925	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.176471
2	44175927	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.294118
2	44175938	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.133333
2	44176058	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	44204692	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.105263
2	44206797	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1
2	44209679	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	44209698	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.3
2	44210270	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.208333
2	44210344	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1
2	44210348	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0666667
2	44210358	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.12
2	44210404	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.125
2	44210405	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	44210429	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0645161
2	44210477	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.125
2	44210482	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0588235
2	44210500	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0857143
2	44210876	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0740741
2	44210880	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.08
2	44210927	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.142857
2	44210989	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	44211015	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0625
2	44211016	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.09375
2	44211057	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.133333
2	44211064	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1
2	44211077	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.171429
2	44211101	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.05
2	44211849	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.105263
2	44211879	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.176471
2	44214119	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	44214159	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44214165	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.166667
2	44214209	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	44215397	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.185185
2	44222874	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.130435
2	44222892	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.16129
2	44226211	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1
2	44226227	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.272727
2	44226237	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0555556
2	44226249	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0769231
2	44226997	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.25
2	44227073	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	44227086	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.117647
2	44227195	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.08
2	44227210	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0740741
2	44227255	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0740741
2	44228305	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1
2	44228317	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.1
2	44228393	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0714286
2	44228421	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.0967742
2	44228968	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.105263
2	44355375	A->G	-	ENSG00000138078	PREPL	protein_coding	Intergenic	.	.	Alu	0.181818
2	44355381	A->G	-	ENSG00000138078	PREPL	protein_coding	Intergenic	.	.	Alu	0.181818
2	44355385	A->G	-	ENSG00000138078	PREPL	protein_coding	Intergenic	.	.	Alu	0.181818
2	45682673	A->G	+	ENSG00000171132	PRKCE	protein_coding	Intergenic	.	.	Alu	0.2
2	45682847	A->G	+	ENSG00000171132	PRKCE	protein_coding	Intergenic	.	.	Alu	0.166667
2	46567458	A->G	+	ENSG00000119729	RHOQ	protein_coding	Intergenic	.	.	Alu	0.166667
2	46638652	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
2	46944750	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.1
2	46944751	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.1
2	46944824	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	46946705	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.125
2	46947669	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.133333
2	46953311	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.2
2	46953357	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.428571
2	46953423	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.105263
2	46953883	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.142857
2	46954705	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.166667
2	46957995	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.121951
2	46968958	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.0833333
2	46970076	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	46970132	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.0833333
2	46990936	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.166667
2	46991370	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.0833333
2	46991402	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.190476
2	46991427	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	47168504	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.363636
2	47168573	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.15
2	47168971	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.166667
2	47169359	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.0714286
2	47169416	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.111111
2	47786870	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.153846
2	47786871	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.230769
2	47787671	A->G	+	ENSG00000116062	MSH6	protein_coding	Intergenic	.	.	Alu	0.142857
2	47823956	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.266667
2	47823960	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.133333
2	47824379	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.117647
2	47824406	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.222222
2	47824416	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.1
2	47836204	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.272727
2	47836507	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47837996	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3
2	47853209	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.2
2	47858782	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.142857
2	47873958	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.15
2	47874105	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	47880085	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.117647
2	47882718	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.115385
2	47882832	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.15
2	47887562	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.117647
2	47890193	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.103448
2	47890224	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0769231
2	47890574	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.266667
2	47890693	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.136364
2	47890697	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.142857
2	47890916	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.3
2	47890942	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.181818
2	48359427	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.133333
2	48359474	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	48367904	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.272727
2	48367917	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.307692
2	48368419	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.166667
2	48368420	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.157895
2	48368463	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.181818
2	48368527	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.2
2	48368545	A->G	+	ENSG00000170802	FOXN2	protein_coding	Intergenic	.	.	Alu	0.2
2	53779631	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.166667
2	53779656	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.3
2	53780576	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.117647
2	53780613	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.125
2	53780634	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.125
2	53780662	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.16
2	53781290	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.142857
2	53781381	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.666667
2	53781543	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.2
2	53781563	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.166667
2	53783062	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.117647
2	53871319	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.192308
2	53871323	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.269231
2	53871361	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.238095
2	53871521	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.285714
2	53871758	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.208333
2	53871763	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.352941
2	53871769	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.117647
2	53871770	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.117647
2	53871831	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.222222
2	53871859	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.222222
2	53871879	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.1
2	53871892	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.238095
2	53871902	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0833333
2	53871914	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.296296
2	53871931	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.178571
2	53874023	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.25
2	53874039	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.176471
2	53874060	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.1875
2	53874132	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0555556
2	53874138	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0555556
2	53874139	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0555556
2	53874197	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.121212
2	53877350	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53890503	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53890582	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53899213	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.5
2	53905619	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53905706	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.266667
2	53928986	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53929158	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.181818
2	53929551	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.111111
2	53952254	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.117647
2	53955149	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.117647
2	53966465	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.15
2	53966470	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	53966536	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.117647
2	53968016	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.230769
2	53968029	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.142857
2	53968030	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.142857
2	53968101	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53968110	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.285714
2	53968116	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.153846
2	53968192	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	54979339	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	55000642	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.6875
2	55011183	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.181818
2	55020879	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.153846
2	55032177	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.181818
2	55032178	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.272727
2	55033023	A->G	-	ENSG00000115310	RTN4	protein_coding	Intergenic	.	.	Alu	0.142857
2	55570083	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.133333
2	55570138	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.142857
2	55571076	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.2
2	55571106	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.1875
2	55571146	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.307692
2	55571162	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.230769
2	55571170	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	1
2	55571210	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.642857
2	55571227	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.25
2	55571228	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.727273
2	55571302	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.166667
2	55571661	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.25
2	55573986	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.0869565
2	55574774	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.2
2	55574775	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.3
2	55575506	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.277778
2	55575548	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.2
2	55575594	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.2
2	55575602	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.133333
2	55575637	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.428571
2	55575658	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.5
2	55575710	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.5
2	55575711	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.9
2	55575717	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.166667
2	55576117	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.1
2	55576227	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.1
2	55576237	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.142857
2	55576249	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.153846
2	55611989	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.142857
2	55612005	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.214286
2	55613043	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.2
2	60897542	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.130435
2	60897745	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.171429
2	60897785	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.608696
2	60897795	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.4
2	60903499	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60903614	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.117647
2	60903634	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0909091
2	60903651	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.214286
2	60903705	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.181818
2	60903736	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.12
2	60903783	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0833333
2	60903805	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.208333
2	60903807	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0833333
2	60903869	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.166667
2	60904217	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.1875
2	60904472	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60904688	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.0625
2	60904783	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.1875
2	60907154	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60907445	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.214286
2	60907519	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.25
2	60909477	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.3
2	60909552	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.153846
2	60909554	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.307692
2	60909692	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.272727
2	60909720	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.1
2	60913370	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.4
2	60934753	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
2	60934761	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	60934762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	60934775	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
2	60935459	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
2	60935511	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	60935533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	61270532	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.6
2	61270533	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.5
2	61270580	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.272727
2	61270592	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61281355	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.166667
2	61338274	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.416667
2	61360691	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.210526
2	61360754	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.166667
2	61360864	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.285714
2	61505503	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.272727
2	61505516	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61505546	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61505556	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61509544	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.384615
2	61510023	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.176471
2	61510077	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.307692
2	61511592	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61513934	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.333333
2	61513941	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.181818
2	61513950	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.357143
2	61517366	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.153846
2	61519441	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61523677	A->G	-	ENSG00000082898	XPO1	protein_coding	Intergenic	.	.	Alu	0.2
2	61870739	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.133333
2	61870800	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.181818
2	61870908	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.181818
2	61871117	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.266667
2	61871128	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	61871129	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.214286
2	61871169	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.352941
2	61871234	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.285714
2	61882019	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	61882563	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	61882633	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.157895
2	61883167	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.111111
2	61883242	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.5
2	61883309	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.666667
2	61883365	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.2
2	61885580	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	61885586	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	61886154	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.2
2	61886176	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.333333
2	64016676	A->G	-	ENSG00000143952	VPS54	protein_coding	Intergenic	.	.	Alu	0.181818
2	64016835	A->G	-	ENSG00000143952	VPS54	protein_coding	Intergenic	.	.	Alu	0.3
2	64016851	A->G	-	ENSG00000143952	VPS54	protein_coding	Intergenic	.	.	Alu	0.272727
2	64016864	A->G	-	ENSG00000143952	VPS54	protein_coding	Intergenic	.	.	Alu	0.2
2	64136795	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.25
2	64138226	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	64138644	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.230769
2	64138645	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.153846
2	64139498	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.125
2	64139508	A->G	-	ENSG00000197329	PELI1	protein_coding	Intergenic	.	.	Alu	0.214286
2	64530035	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.428571
2	64530036	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.571429
2	64530049	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.181818
2	65078607	A->G	-	ENSG00000011523	CEP68	protein_coding	Intergenic	.	.	Alu	0.2
2	65091650	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1
2	65091654	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65091674	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.32
2	65091694	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.12
2	65091724	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.107143
2	65091748	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.115385
2	65092093	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65092151	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.3
2	65092161	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.12
2	65092207	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.148148
2	65092213	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.333333
2	65094108	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65094126	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65094171	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65094189	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65094212	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65094422	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.16129
2	65094428	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.193548
2	65094435	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0882353
2	65094462	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0606061
2	65094472	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.125
2	65094501	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0666667
2	65094508	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65095254	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0555556
2	65095287	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.125
2	65095309	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.304348
2	65095311	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.130435
2	65095488	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65095510	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65095552	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.266667
2	65095579	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65095591	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.117647
2	65095637	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.307692
2	65095645	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65095655	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65095755	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1
2	65096044	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.214286
2	65096053	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.230769
2	65100901	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.176471
2	65100954	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65100997	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65101083	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.08
2	65102721	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65107552	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65107572	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1
2	65107585	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.176471
2	65107590	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.15
2	65107977	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65108001	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65108770	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.266667
2	65108787	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	65112052	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65113017	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.190476
2	65117337	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65118751	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.416667
2	65118759	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65119754	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0909091
2	65119784	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1
2	65119787	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1
2	65119788	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.15
2	65122433	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65122438	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65122441	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.111111
2	65122520	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1
2	65122548	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.217391
2	65123593	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	65123621	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.0869565
2	65123623	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.285714
2	65123646	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65123658	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.1
2	65123660	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65123686	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.285714
2	65123702	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.285714
2	65123731	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.25
2	65123769	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	65124690	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65127488	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65230799	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.2
2	65230825	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.133333
2	65237351	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.125
2	65424026	A->G	-	ENSG00000198369	SPRED2	protein_coding	Intergenic	.	.	Alu	0.3
2	68191403	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.333333
2	68209696	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.133333
2	68209751	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.25
2	68212263	A->G	-	ENSG00000221823	PPP3R1	protein_coding	Intergenic	.	.	Alu	0.153846
2	68786124	A->G	+	ENSG00000163219	ARHGAP25	protein_coding	Intergenic	.	.	Alu	0.4
2	69831018	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.3
2	69831019	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.2
2	69831659	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.454545
2	69831706	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.333333
2	70234744	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.166667
2	70236572	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.1875
2	70236576	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.117647
2	70236577	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.117647
2	70238794	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
2	70238806	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
2	70238808	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.3125
2	70238866	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.117647
2	70238974	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.5
2	70243375	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.25
2	70244601	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.272727
2	70245016	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.2
2	70246190	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.230769
2	70246196	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.125
2	70246197	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.125
2	70246199	A->G	-	ENSG00000115998	C2orf42	protein_coding	Intergenic	.	.	Alu	0.111111
2	70290117	A->G	-	ENSG00000143977	SNRPG	protein_coding	Intergenic	.	.	Alu	0.230769
2	70290133	A->G	-	ENSG00000143977	SNRPG	protein_coding	Intergenic	.	.	Alu	0.307692
2	71080887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	71080898	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
2	71335243	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.222222
2	71335303	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.153846
2	71386917	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.727273
2	71386948	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.545455
2	74012195	A->G	+	ENSG00000187605	TET3	protein_coding	Intergenic	.	.	Alu	0.2
2	74157963	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	74159384	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	74159483	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.0833333
2	74159546	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.25
2	74160308	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	74162418	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.105263
2	74168057	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.153846
2	74168531	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	74168548	A->G	-	ENSG00000114978	MOB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	84978054	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.181818
2	84979050	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	84984336	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.133333
2	84984363	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.333333
2	84984369	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.1875
2	84993162	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.2
2	84994637	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.181818
2	85043770	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.153846
2	85043771	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.142857
2	85043772	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.142857
2	85043802	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.105263
2	85044578	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.111111
2	85044989	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	85045008	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	85045013	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.12
2	85045065	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.176471
2	85047392	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.5
2	85047792	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.461538
2	85047835	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.5
2	85323013	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.272727
2	85323098	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.5
2	85323102	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.285714
2	85323146	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	85323147	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	85323150	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	85323186	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.176471
2	85323231	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.2
2	85323239	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.181818
2	85323374	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.473684
2	85323400	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	85323403	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.214286
2	85323528	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.3
2	85323564	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.230769
2	85625856	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.25
2	85625897	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.1875
2	85625914	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.125
2	85625930	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.153846
2	85628263	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.272727
2	85628352	A->G	+	ENSG00000168883	USP39	protein_coding	Intergenic	.	.	Alu	0.2
2	86143861	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	86446453	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.176471
2	86446544	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.266667
2	86446547	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.142857
2	86446589	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.5
2	86446590	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.222222
2	86446867	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.115385
2	86446873	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.48
2	86446875	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.36
2	86446915	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.0540541
2	86446945	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.444444
2	86446951	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.0789474
2	86446961	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.102564
2	86447012	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.111111
2	86447031	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.0833333
2	86447073	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.0952381
2	86473176	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.307692
2	86473185	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.181818
2	86473290	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.352941
2	86473294	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.529412
2	86473512	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.166667
2	86473559	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.1
2	86473561	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.0909091
2	86473568	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.1
2	86473603	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.157895
2	86473639	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.277778
2	86473644	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.117647
2	86473704	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.1875
2	86755186	A->G	+	ENSG00000153561	RMND5A	protein_coding	Intergenic	.	.	Alu	0.266667
2	86755339	A->G	+	ENSG00000153561	RMND5A	protein_coding	Intergenic	.	.	Alu	0.25
2	86756272	A->G	+	ENSG00000153561	RMND5A	protein_coding	Intergenic	.	.	Alu	0.105263
2	86772334	A->G	+	ENSG00000153561	RMND5A	protein_coding	Intergenic	.	.	Alu	0.7
2	86772340	A->G	+	ENSG00000153561	RMND5A	protein_coding	Intergenic	.	.	Alu	0.272727
2	87050136	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
2	87050188	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.148148
2	87050194	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0606061
2	87050244	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0810811
2	87050252	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0833333
2	87050279	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.294118
2	87050286	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0606061
2	87050716	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.0571429
2	87050780	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.08
2	87067094	A->G	-	ENSG00000266931	AC092651.2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.6875
2	87461753	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.272727
2	87461762	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.7
2	87466476	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.529412
2	87480866	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.1
2	87480876	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.130435
2	87480879	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.0833333
2	88594364	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.272727
2	88594369	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.181818
2	88608922	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.153846
2	88609006	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.105263
2	88609874	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.157895
2	88610812	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.214286
2	88610827	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.1875
2	88610872	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.153846
2	88610969	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.105263
2	88610970	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.1
2	88611768	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.571429
2	88611769	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.363636
2	88611887	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.111111
2	88611890	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.111111
2	88611895	A->G	-	ENSG00000172071	EIF2AK3	protein_coding	Intergenic	.	.	Alu	0.210526
2	95825172	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
2	95825198	A->G	-	.	.	.	Intergenic	.	.	Alu	0.391304
2	95825206	A->G	-	.	.	.	Intergenic	.	.	Alu	0.44
2	95825376	A->G	-	.	.	.	Intergenic	.	.	Alu	0.137931
2	95825417	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	95825428	A->G	-	.	.	.	Intergenic	.	.	Alu	0.37037
2	95825438	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
2	95825441	A->G	-	.	.	.	Intergenic	.	.	Alu	0.193548
2	95829561	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
2	95829570	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	95829732	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
2	95829733	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
2	95830111	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
2	95830116	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
2	95830344	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	95830451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
2	95831076	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
2	95831179	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
2	95831227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.818182
2	95831639	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
2	95831671	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
2	95831703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.714286
2	95831740	A->G	-	.	.	.	Intergenic	.	.	Alu	0.642857
2	95831747	A->G	-	.	.	.	Intergenic	.	.	Alu	0.714286
2	95831748	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
2	95831860	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
2	95832730	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0857143
2	95834377	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	95834386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	95834394	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
2	95834801	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
2	95836334	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	95836744	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
2	95836788	A->G	-	.	.	.	Intergenic	.	.	Alu	0.227273
2	95939703	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	Intergenic	.	.	Alu	0.285714
2	95940061	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	Intergenic	.	.	Alu	0.133333
2	96280008	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.166667
2	96280489	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.3
2	96545210	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.333333
2	96545220	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.375
2	96545221	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.125
2	96545226	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.3125
2	96545256	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.142857
2	96545257	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.133333
2	96545258	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.133333
2	96545903	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.285714
2	96545904	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.142857
2	96545909	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.266667
2	96624584	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.363636
2	96624624	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.583333
2	96624627	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	96624943	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.125
2	96624949	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.3
2	96624961	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.176471
2	96624962	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	96624989	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.222222
2	96625022	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.421053
2	96625047	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.611111
2	96625055	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.235294
2	96625086	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.307692
2	96625088	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	96625128	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.3
2	96625153	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.181818
2	96625158	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.909091
2	96625188	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.352941
2	96625208	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.222222
2	96628421	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	96628433	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	96628467	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.133333
2	96628482	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.105263
2	96628493	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.117647
2	96632633	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.333333
2	96632635	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.625
2	96635131	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.384615
2	96635179	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.2
2	96827470	A->G	+	ENSG00000168763	CNNM3	protein_coding	Intergenic	.	.	Alu	0.0454545
2	97200092	A->G	+	ENSG00000135976	ANKRD36	protein_coding	Intergenic	.	.	Alu	0.461538
2	97267634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
2	97267706	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
2	97267822	A->G	+	.	.	.	Intergenic	.	.	Alu	0.208333
2	97428887	A->G	-	ENSG00000278766	AC092683.2	lincRNA	Intergenic	.	.	Alu	0.15
2	97428918	A->G	-	ENSG00000278766	AC092683.2	lincRNA	Intergenic	.	.	Alu	0.136364
2	97579875	A->G	-	ENSG00000196912	ANKRD36B	protein_coding	Intergenic	.	.	Alu	0.333333
2	97978562	A->G	-	ENSG00000075568	TMEM131	protein_coding	Intergenic	.	.	Alu	0.2
3	10122630	A->G	+	ENSG00000254999	BRK1	protein_coding	Intergenic	.	.	Alu	0.142857
3	10122665	A->G	+	ENSG00000254999	BRK1	protein_coding	Intergenic	.	.	Alu	0.153846
3	10122666	A->G	+	ENSG00000254999	BRK1	protein_coding	Intergenic	.	.	Alu	0.230769
3	10125356	A->G	+	ENSG00000254999	BRK1	protein_coding	Intergenic	.	.	Alu	0.142857
3	10152289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.04
3	10152619	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
3	10152701	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	10152985	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10153282	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0338983
3	12579401	A->G	+	ENSG00000075975	MKRN2	protein_coding	Intergenic	.	.	Alu	0.166667
3	12579410	A->G	+	ENSG00000075975	MKRN2	protein_coding	Intergenic	.	.	Alu	0.181818
3	12596110	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.153846
3	12641941	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12642024	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.3
3	12647511	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.166667
3	12660595	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.166667
3	12999731	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.5
3	12999732	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.75
3	13002021	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.153846
3	13002028	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.142857
3	13002037	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.411765
3	13002042	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.714286
3	14154728	A->G	-	ENSG00000228242	AC093495.1	antisense	Intergenic	.	.	Alu	0.3
3	15018259	A->G	+	ENSG00000177463	NR2C2	protein_coding	Intergenic	.	.	Alu	0.3
3	15214494	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.2
3	15248862	A->G	+	ENSG00000131375	CAPN7	protein_coding	Intergenic	.	.	Alu	0.153846
3	15773539	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.142857
3	15773542	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.142857
3	15773543	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.142857
3	15813271	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.153846
3	15815421	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.1875
3	15815506	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.153846
3	15815544	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.2
3	15816939	A->G	-	ENSG00000206560	ANKRD28	protein_coding	Intergenic	.	.	Alu	0.4
3	16310788	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.166667
3	16310789	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.277778
3	16310806	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	16310810	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.111111
3	16310828	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.2
3	19951544	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.12963
3	19951545	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.109091
3	19951547	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0555556
3	19954636	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0769231
3	19957071	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.153846
3	19962476	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.2
3	19963089	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.153846
3	19979033	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.142857
3	19979467	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.214286
3	19979470	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.214286
3	19979492	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.363636
3	19979532	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.117647
3	19979559	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.166667
3	20044261	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.2
3	20046326	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.166667
3	20046327	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.166667
3	20046348	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.2
3	20046349	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.272727
3	20053384	A->G	+	ENSG00000114166	KAT2B	protein_coding	Intergenic	.	.	Alu	0.2
3	23813564	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23815225	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23816451	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.111111
3	23816478	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.25
3	23816586	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23816613	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.181818
3	23816628	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.181818
3	23816686	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.157895
3	23831591	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.333333
3	23831596	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23831610	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.1875
3	23831728	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.181818
3	23831748	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.230769
3	23831790	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.294118
3	23831797	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.117647
3	23831814	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23831967	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23831968	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23831986	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23832551	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.117647
3	23832566	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.210526
3	23832680	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.08
3	23832723	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	23834654	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23838064	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.461538
3	23838171	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.461538
3	23838180	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.230769
3	23838492	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	23839209	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23839214	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23839353	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23839379	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.4
3	23839385	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.25
3	23839389	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23839390	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23839446	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.230769
3	23847757	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23847769	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23848198	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.227273
3	23848200	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.428571
3	23848259	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.153846
3	23848420	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.8
3	23848449	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.4
3	23850596	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.214286
3	23850610	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.133333
3	23850767	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.142857
3	23850800	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.153846
3	23850806	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.2
3	23851578	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.111111
3	23851579	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.105263
3	23851681	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.3
3	23851687	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.181818
3	23852712	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.166667
3	23856259	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.25
3	23858588	A->G	+	ENSG00000170142	UBE2E1	protein_coding	Intergenic	.	.	Alu	0.214286
3	23960160	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.181818
3	23960258	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.181818
3	23960285	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.2
3	23960460	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.357143
3	23960470	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.166667
3	23965510	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.142857
3	23970882	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.181818
3	23975243	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.2
3	25752757	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intergenic	.	.	Alu	0.727273
3	25769317	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intergenic	.	.	Alu	0.166667
3	27463964	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.153846
3	27474589	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.416667
3	27474599	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.153846
3	27474916	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.166667
3	27474925	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.181818
3	27475053	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.125
3	27480306	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.133333
3	27480345	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.166667
3	27482628	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.2
3	27482696	A->G	-	ENSG00000033867	SLC4A7	protein_coding	Intergenic	.	.	Alu	0.2
3	28335047	A->G	-	ENSG00000163512	AZI2	protein_coding	Intergenic	.	.	Alu	0.5
3	30616011	A->G	+	ENSG00000163513	TGFBR2	protein_coding	Intergenic	.	.	Alu	0.12
3	30621481	A->G	+	ENSG00000163513	TGFBR2	protein_coding	Intergenic	.	.	Alu	0.181818
3	30621524	A->G	+	ENSG00000163513	TGFBR2	protein_coding	Intergenic	.	.	Alu	0.166667
3	30621555	A->G	+	ENSG00000163513	TGFBR2	protein_coding	Intergenic	.	.	Alu	0.285714
3	30627586	A->G	+	ENSG00000163513	TGFBR2	protein_coding	Intergenic	.	.	Alu	0.384615
3	31608839	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.5
3	31608845	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.363636
3	31630995	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.153846
3	31631692	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.142857
3	31632117	A->G	+	ENSG00000163527	STT3B	protein_coding	Intergenic	.	.	Alu	0.0909091
3	32533443	A->G	-	ENSG00000144635	DYNC1LI1	protein_coding	Intergenic	.	.	Alu	0.2
3	33427002	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	33427957	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.111111
3	33427966	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.133333
3	33428038	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.214286
3	33428082	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.153846
3	33429411	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.1
3	33429414	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.238095
3	33429475	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.142857
3	33433918	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.375
3	33433924	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.333333
3	33435603	A->G	-	ENSG00000153560	UBP1	protein_coding	Intergenic	.	.	Alu	0.25
3	33550296	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	1
3	33810686	A->G	+	ENSG00000170248	PDCD6IP	protein_coding	Intergenic	.	.	Alu	0.25
3	33810821	A->G	+	ENSG00000170248	PDCD6IP	protein_coding	Intergenic	.	.	Alu	0.2
3	37071294	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	37071411	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.416667
3	37071430	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.142857
3	37071439	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.3125
3	37102775	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	37102781	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.142857
3	37102783	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.142857
3	37251785	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.173913
3	37251796	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.461538
3	37251802	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.12
3	37252972	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.0833333
3	37253015	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.117647
3	37253016	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.133333
3	37253039	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.08
3	37253108	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.1
3	37253124	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.235294
3	37253158	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.25
3	37253163	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.133333
3	37253222	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.25
3	37255879	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.0740741
3	37255989	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.0909091
3	37255995	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	37258511	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.142857
3	37266472	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.133333
3	37268159	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.125
3	37268182	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.176471
3	37268199	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.117647
3	37268207	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.117647
3	37268208	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.176471
3	37270390	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	37270461	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.0909091
3	37270480	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.142857
3	37271090	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.315789
3	37271757	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.3
3	37272361	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.153846
3	37273892	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.111111
3	37273940	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.1
3	37278310	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.166667
3	37278329	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.285714
3	37278412	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.125
3	37278876	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.142857
3	37278892	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.133333
3	37279827	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.2
3	37279857	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.2
3	37279894	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.153846
3	37312663	A->G	+	ENSG00000144674	GOLGA4	protein_coding	Intergenic	.	.	Alu	0.230769
3	38136410	A->G	-	ENSG00000060971	ACAA1	protein_coding	Intergenic	.	.	Alu	0.272727
3	38136415	A->G	-	ENSG00000060971	ACAA1	protein_coding	Intergenic	.	.	Alu	0.214286
3	39057628	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.176471
3	39057655	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.230769
3	39057722	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.142857
3	39058120	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0645161
3	39058151	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.363636
3	39058167	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.257143
3	39058995	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.105263
3	39063681	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.756757
3	39063688	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.09375
3	39063693	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0588235
3	39063711	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0769231
3	39063728	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0588235
3	39063733	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0571429
3	39063797	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.241379
3	39063798	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.241379
3	39063801	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.142857
3	39063827	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.419355
3	39063833	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0588235
3	39063837	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.1
3	39063892	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0571429
3	39063896	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0571429
3	39063906	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.15625
3	39063908	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.137931
3	39064313	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.166667
3	39064353	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0714286
3	39064354	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.1
3	39064375	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0526316
3	39064392	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.454545
3	39064414	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.129032
3	39064416	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0967742
3	39064440	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.16
3	39064441	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.208333
3	39064455	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.136364
3	39064484	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.333333
3	39064495	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.142857
3	39064503	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.272727
3	39064509	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.130435
3	39064549	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.461538
3	39092048	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.0909091
3	39093413	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.333333
3	39093471	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.235294
3	39093473	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.411765
3	39093481	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.1875
3	39093612	A->G	+	ENSG00000114742	WDR48	protein_coding	Intergenic	.	.	Alu	0.142857
3	39393727	A->G	+	ENSG00000144659	SLC25A38	protein_coding	Intergenic	.	.	Alu	0.214286
3	39409281	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.363636
3	39409341	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.15
3	39409382	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.214286
3	39409399	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.1875
3	39409475	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.4
3	39409753	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.111111
3	39410042	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.235294
3	39410045	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.142857
3	39413401	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	41210204	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.08
3	41210276	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0571429
3	41210307	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.05
3	41210360	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.333333
3	41210374	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.541667
3	41210375	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.125
3	41210821	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.333333
3	41210829	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.153846
3	41210890	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.1
3	41210902	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.4
3	41210929	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.368421
3	41210982	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.142857
3	41211031	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.166667
3	41211061	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	42015969	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.3
3	42015987	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.166667
3	42022631	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.166667
3	42034526	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.153846
3	42034543	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.357143
3	42044318	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.142857
3	42045490	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.2
3	42045498	A->G	+	ENSG00000182606	TRAK1	protein_coding	Intergenic	.	.	Alu	0.2
3	42566838	A->G	-	ENSG00000093183	SEC22C	protein_coding	Intergenic	.	.	Alu	0.4
3	42603836	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.166667
3	42603921	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.142857
3	42603923	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.142857
3	42606752	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.181818
3	42606774	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.272727
3	42606775	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.666667
3	42606779	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.363636
3	42607438	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.214286
3	42608174	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.214286
3	42608211	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.153846
3	42608225	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.0769231
3	42608229	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.111111
3	42608234	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.08
3	42609048	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.3
3	42609049	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.2
3	42610289	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.111111
3	42611479	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.133333
3	42611582	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.133333
3	42612072	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.0952381
3	42618658	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.181818
3	42618718	A->G	+	ENSG00000114857	NKTR	protein_coding	Intergenic	.	.	Alu	0.190476
3	43293682	A->G	+	ENSG00000163788	SNRK	protein_coding	Intergenic	.	.	Alu	0.1875
3	43293798	A->G	+	ENSG00000163788	SNRK	protein_coding	Intergenic	.	.	Alu	0.333333
3	43293799	A->G	+	ENSG00000163788	SNRK	protein_coding	Intergenic	.	.	Alu	0.111111
3	46942818	A->G	-	ENSG00000160799	CCDC12	protein_coding	Intergenic	.	.	Alu	0.25
3	46951077	A->G	-	ENSG00000160799	CCDC12	protein_coding	Intergenic	.	.	Alu	0.133333
3	46951093	A->G	-	ENSG00000160799	CCDC12	protein_coding	Intergenic	.	.	Alu	0.3125
3	46972212	A->G	-	ENSG00000160799	CCDC12	protein_coding	Intergenic	.	.	Alu	0.166667
3	47060218	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.3
3	47065753	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.153846
3	47090136	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.454545
3	47090164	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.117647
3	47090233	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.125
3	47090487	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.181818
3	47090515	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.230769
3	47090555	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.545455
3	47090585	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.272727
3	47090586	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.230769
3	47090593	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.166667
3	47090632	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.2
3	47098575	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.153846
3	47127132	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.166667
3	47146545	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.2
3	47146546	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.5
3	47146789	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.166667
3	47146898	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.153846
3	47146899	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.230769
3	47159048	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.117647
3	47687616	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.117647
3	47695218	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.166667
3	47695222	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.25
3	47695282	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.230769
3	47695292	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.166667
3	47778344	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intergenic	.	.	Alu	0.2
3	47836247	A->G	+	ENSG00000132153	DHX30	protein_coding	Intergenic	.	.	Alu	0.2
3	48691653	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.25
3	48691684	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.153846
3	48691715	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.1
3	48691716	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.2
3	48692003	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.333333
3	48692008	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.142857
3	48692010	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.142857
3	48692011	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.714286
3	48698401	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
3	48698746	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.117647
3	48698871	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.176471
3	48698925	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.1875
3	48699140	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0666667
3	48699153	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0967742
3	48699968	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.142857
3	48699972	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
3	48699993	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.125
3	48701835	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.2
3	48704642	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.153846
3	48708239	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.454545
3	48710135	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0666667
3	48710207	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.227273
3	48710268	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.214286
3	48710274	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.333333
3	48711073	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.1875
3	48711105	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.133333
3	48711114	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.230769
3	48711170	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.133333
3	48711183	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.384615
3	48712751	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.0666667
3	48714485	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intergenic	.	.	Alu	0.117647
3	48923328	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.166667
3	48923721	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48924009	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.166667
3	48924023	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.181818
3	48924032	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.125
3	48930561	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.142857
3	49009079	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.181818
3	49009082	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.8
3	49009102	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.625
3	49009134	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.5
3	49009143	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.125
3	49009764	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.142857
3	49009797	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.3
3	49009983	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.1
3	49009984	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.1
3	49010347	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.142857
3	49010538	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.2
3	49010639	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.230769
3	49010663	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.466667
3	49011340	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.192308
3	49011341	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.28
3	49011347	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.423077
3	49011353	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.0714286
3	49038927	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.307692
3	49038944	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49041438	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49064753	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49065282	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.105263
3	49065337	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.117647
3	49065338	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.176471
3	49066050	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.470588
3	49066128	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.2
3	49066193	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.285714
3	49069631	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.2
3	49070065	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.117647
3	49071807	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49071863	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.0740741
3	49071971	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49072176	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.272727
3	49072226	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49072358	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49072443	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.111111
3	49072482	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.1875
3	49073904	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.5625
3	49073922	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.235294
3	49073950	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49073965	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.125
3	49074010	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	49075206	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49088330	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.15
3	49307723	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.181818
3	49316474	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.545455
3	49318172	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49318177	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49318211	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.111111
3	49319072	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49319085	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.115385
3	49319112	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.111111
3	49319115	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.4375
3	49319120	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.266667
3	49319471	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.142857
3	49319478	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.125
3	49319539	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.214286
3	49319674	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.117647
3	49319681	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.125
3	49319885	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49319886	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.181818
3	49320014	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49320055	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49320068	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.235294
3	49320081	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.125
3	49320529	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.272727
3	49320544	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.181818
3	49320585	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.181818
3	49320587	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.5
3	49321690	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.230769
3	49321873	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49321883	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.125
3	49321947	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.235294
3	49321950	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.578947
3	49321973	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.222222
3	49322390	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.157895
3	49322616	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.227273
3	49322617	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.190476
3	49322669	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.0952381
3	49322678	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.176471
3	49322695	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.111111
3	49322717	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.4375
3	49322736	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.1875
3	49322739	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.25
3	49322800	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.157895
3	49322805	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.157895
3	49322831	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.176471
3	49323417	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49324041	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.176471
3	49324226	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.176471
3	49324257	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.1
3	49324280	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.0952381
3	49329589	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.25
3	49332956	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49360530	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.285714
3	49360841	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.2
3	49365973	A->G	-	ENSG00000235908	RHOA-IT1	sense_intronic	Intergenic	.	.	Alu	0.263158
3	49367607	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.166667
3	49367659	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.210526
3	49367660	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.105263
3	49367764	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.133333
3	49369648	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.214286
3	49370138	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.166667
3	49370147	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.166667
3	49370152	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.266667
3	49371559	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.25
3	49371566	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.142857
3	49373081	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0833333
3	49373087	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.107143
3	49373127	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.125
3	49373196	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0952381
3	49373235	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.0909091
3	49375184	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.153846
3	49378868	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.272727
3	49384580	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.166667
3	49388147	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.230769
3	49399710	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.111111
3	49400605	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.4
3	49405725	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.181818
3	49405889	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.2
3	49754433	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.285714
3	49754439	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.142857
3	49754440	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49754463	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49761762	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.105263
3	49761782	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.105263
3	49761799	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.142857
3	49761860	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49761899	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49761940	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.3
3	49762122	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49762123	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.230769
3	49762125	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49762150	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49762417	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.125
3	49762419	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.125
3	49762425	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.266667
3	49770585	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49771798	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.25
3	49771809	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.333333
3	49771957	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49771969	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.25
3	49771970	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49771996	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49772011	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49772086	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49772441	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49772474	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.125
3	49772518	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.111111
3	49772528	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.111111
3	49772541	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	49772543	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.142857
3	49772554	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.105263
3	49772582	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49772921	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.285714
3	49772963	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.1
3	49773113	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49773446	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49773926	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.1
3	49773927	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49774260	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49774273	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.142857
3	49774284	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.222222
3	49774286	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.111111
3	49774308	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.125
3	49777160	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.173913
3	49777441	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49778387	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.384615
3	49778388	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.230769
3	49778415	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.125
3	49778416	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.117647
3	49778436	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.142857
3	49778476	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.210526
3	49778521	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49778533	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.25
3	49778573	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.583333
3	49778742	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49778786	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49778790	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49778798	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.285714
3	49778869	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.125
3	49778897	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49778898	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49779432	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.138889
3	49779887	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.1875
3	49779889	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.111111
3	49779937	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49779963	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.111111
3	49779974	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.266667
3	49779983	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.230769
3	49781853	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	49781981	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.133333
3	49782605	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	49782689	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.25
3	49782695	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.315789
3	49782711	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.111111
3	49782729	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.157895
3	49783456	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.0740741
3	49783519	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	49783523	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.210526
3	49783601	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	49783603	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	49784510	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.2
3	49784862	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49784863	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.181818
3	49979597	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	49980070	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50001215	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.166667
3	50017100	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50020036	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50021385	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50021449	A->G	+	ENSG00000004534	RBM6	protein_coding	Intergenic	.	.	Alu	0.2
3	50093089	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.333333
3	50093091	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.214286
3	50095055	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.08
3	50095122	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0714286
3	50096220	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.15625
3	50096234	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0789474
3	50096256	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0645161
3	50096264	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.233333
3	50096305	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.310345
3	50096427	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0930233
3	50096453	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0425532
3	50096464	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0571429
3	50096475	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0769231
3	50096621	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.473684
3	50096690	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.151515
3	50096694	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0666667
3	50096702	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.212121
3	50096708	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.230769
3	50096720	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.222222
3	50096730	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0555556
3	50096797	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.333333
3	50096809	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.428571
3	50096816	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0566038
3	50096845	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.047619
3	50096868	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0243902
3	50096869	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0361446
3	50096875	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.105882
3	50097118	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.380952
3	50097154	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.315789
3	50097167	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1
3	50097302	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.133333
3	50097383	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	50098288	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0434783
3	50098289	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0888889
3	50098380	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0625
3	50098385	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0689655
3	50098398	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.130435
3	50098401	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.352941
3	50098624	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0689655
3	50098636	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0645161
3	50098641	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50098649	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.314286
3	50098702	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0588235
3	50098703	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.205882
3	50098704	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0588235
3	50098765	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0444444
3	50098777	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.466667
3	50098789	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.396552
3	50098841	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.107692
3	50098842	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0322581
3	50098848	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0454545
3	50098991	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.108696
3	50099000	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0416667
3	50099077	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0392157
3	50099090	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0416667
3	50099094	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0638298
3	50099095	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0416667
3	50099140	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0588235
3	50099211	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50099213	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.121951
3	50105221	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0645161
3	50244435	A->G	+	ENSG00000114353	GNAI2	protein_coding	Intergenic	.	.	Alu	0.538462
3	50332541	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.217391
3	50332552	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.12
3	50332557	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.304348
3	50332595	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.421053
3	50332668	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	50332670	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.272727
3	50332692	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	50332697	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.1
3	50332708	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.105263
3	50332740	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.259259
3	50332774	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.259259
3	50332778	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.192308
3	50332789	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.238095
3	50333510	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.12
3	50333512	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0769231
3	50333544	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.107143
3	50333569	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.263158
3	50333588	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.137931
3	50333592	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.1875
3	50333598	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.103448
3	50333605	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.2
3	50333609	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.09375
3	50333615	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.15625
3	50333644	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.205882
3	50333668	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.294118
3	50333692	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.172414
3	50333698	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0740741
3	50333768	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.105263
3	50334281	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.09375
3	50335025	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.130435
3	50335481	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0555556
3	50335514	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0540541
3	50336014	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0833333
3	50621698	A->G	+	ENSG00000114738	MAPKAPK3	protein_coding	Intergenic	.	.	Alu	0.230769
3	50621728	A->G	+	ENSG00000114738	MAPKAPK3	protein_coding	Intergenic	.	.	Alu	0.153846
3	51431731	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.25
3	51431734	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.5
3	51431735	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.153846
3	51434342	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.3
3	51434392	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.6
3	51492311	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.133333
3	51492414	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	51492437	A->G	-	ENSG00000145041	DCAF1	protein_coding	Intergenic	.	.	Alu	0.117647
3	51544647	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.2
3	51544660	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.272727
3	51544711	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.181818
3	51544881	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.25
3	51547328	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.117647
3	51547339	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.153846
3	51551262	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.3
3	51551536	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.105263
3	51551562	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.105263
3	51551709	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.0909091
3	51551827	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.153846
3	52268936	A->G	-	ENSG00000164091	WDR82	protein_coding	Intergenic	.	.	Alu	0.3
3	52269363	A->G	-	ENSG00000164091	WDR82	protein_coding	Intergenic	.	.	Alu	0.2
3	52274395	A->G	-	ENSG00000164091	WDR82	protein_coding	Intergenic	.	.	Alu	0.125
3	52461056	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.166667
3	52474133	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.2
3	52475079	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.142857
3	52475101	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.15
3	52475123	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.125
3	52475128	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.117647
3	52475607	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.1
3	52476047	A->G	+	ENSG00000010322	NISCH	protein_coding	Intergenic	.	.	Alu	0.363636
3	52604610	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.181818
3	52606276	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.2
3	52640794	A->G	-	ENSG00000163939	PBRM1	protein_coding	Intergenic	.	.	Alu	0.2
3	52689721	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.125
3	52689738	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.125
3	52689766	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.333333
3	52689767	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.75
3	52689782	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.25
3	52690445	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.25
3	52690470	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.5
3	53296031	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.142857
3	53297493	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.133333
3	53297537	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.0869565
3	53297586	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.111111
3	53298132	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.111111
3	53307005	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	53308800	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.3
3	53308874	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.117647
3	53309501	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.25
3	53309597	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.210526
3	53309757	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.0952381
3	53318193	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.181818
3	53330281	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.142857
3	53330444	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.142857
3	53331015	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.363636
3	53331062	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.142857
3	53334265	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.25
3	53340197	A->G	-	ENSG00000272886	DCP1A	protein_coding	Intergenic	.	.	Alu	0.230769
3	56795766	A->G	-	ENSG00000163947	ARHGEF3	protein_coding	Intergenic	.	.	Alu	0.230769
3	56795821	A->G	-	ENSG00000163947	ARHGEF3	protein_coding	Intergenic	.	.	Alu	0.2
3	57230839	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.181818
3	57231633	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.2
3	57234009	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.375
3	57234066	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.210526
3	57234756	A->G	+	ENSG00000157500	APPL1	protein_coding	Intergenic	.	.	Alu	0.3
3	57568202	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
3	57571111	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
3	57573658	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.307692
3	57575089	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.181818
3	57577870	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.454545
3	57580001	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57580074	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.3
3	57580848	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.133333
3	57580860	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.153846
3	57584198	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57587244	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57591631	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.181818
3	57592296	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.166667
3	57592304	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.133333
3	57592388	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.153846
3	57592452	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.363636
3	57592943	A->G	+	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.181818
3	57594086	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.3125
3	57594363	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.333333
3	57594383	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.142857
3	57660651	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.272727
3	57678982	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.181818
3	57684757	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.153846
3	57684859	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.2
3	57684886	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.153846
3	57687730	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.25
3	57687870	A->G	-	ENSG00000174839	DENND6A	protein_coding	Intergenic	.	.	Alu	0.181818
3	57850151	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.166667
3	57850496	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.307692
3	57892711	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.25
3	57892712	A->G	+	ENSG00000163681	SLMAP	protein_coding	Intergenic	.	.	Alu	0.166667
3	58307606	A->G	+	ENSG00000163684	RPP14	protein_coding	Intergenic	.	.	Alu	0.142857
3	58311950	A->G	+	ENSG00000163684	RPP14	protein_coding	Intergenic	.	.	Alu	0.272727
3	58369639	A->G	+	ENSG00000168297	PXK	protein_coding	Intergenic	.	.	Alu	0.2
3	58426565	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	58426570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
3	58426606	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	58426611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
3	58426651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
3	58426965	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	58427089	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	58427480	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	58427528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	58427533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
3	58427541	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	63867413	A->G	+	ENSG00000285399	AC104162.2	bidirectional_promoter_lncRNA	Intergenic	.	.	Alu	0.307692
3	63867711	A->G	+	ENSG00000285399	AC104162.2	bidirectional_promoter_lncRNA	Intergenic	.	.	Alu	0.166667
3	63867810	A->G	+	ENSG00000285399	AC104162.2	bidirectional_promoter_lncRNA	Intergenic	.	.	Alu	0.272727
3	63867811	A->G	+	ENSG00000285399	AC104162.2	bidirectional_promoter_lncRNA	Intergenic	.	.	Alu	0.545455
3	63923624	A->G	+	ENSG00000285258	ATXN7	protein_coding	Intergenic	.	.	Alu	0.142857
3	63923673	A->G	+	ENSG00000285258	ATXN7	protein_coding	Intergenic	.	.	Alu	0.272727
3	63944885	A->G	+	ENSG00000285258	ATXN7	protein_coding	Intergenic	.	.	Alu	0.3
3	66283422	A->G	+	ENSG00000144741	SLC25A26	protein_coding	Intergenic	.	.	Alu	0.2
3	67631410	A->G	-	ENSG00000172340	SUCLG2	protein_coding	Intergenic	.	.	Alu	0.2
3	67631411	A->G	-	ENSG00000172340	SUCLG2	protein_coding	Intergenic	.	.	Alu	0.4
3	67631471	A->G	-	ENSG00000172340	SUCLG2	protein_coding	Intergenic	.	.	Alu	0.2
3	67631543	A->G	-	ENSG00000172340	SUCLG2	protein_coding	Intergenic	.	.	Alu	0.5
3	67631545	A->G	-	ENSG00000172340	SUCLG2	protein_coding	Intergenic	.	.	Alu	0.4
3	68997644	A->G	-	ENSG00000163378	EOGT	protein_coding	Intergenic	.	.	Alu	0.272727
3	69026535	A->G	-	ENSG00000244513	AC109587.1	antisense	Intergenic	.	.	Alu	0.5
3	69027223	A->G	-	ENSG00000244513	AC109587.1	antisense	Intergenic	.	.	Alu	0.230769
3	71106965	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	71559609	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	71708074	A->G	-	ENSG00000163412	EIF4E3	protein_coding	Intergenic	.	.	Alu	0.153846
3	71708146	A->G	-	ENSG00000163412	EIF4E3	protein_coding	Intergenic	.	.	Alu	0.153846
3	71708147	A->G	-	ENSG00000163412	EIF4E3	protein_coding	Intergenic	.	.	Alu	0.153846
3	71720454	A->G	-	ENSG00000163412	EIF4E3	protein_coding	Intergenic	.	.	Alu	0.533333
3	72435210	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.2
3	72436098	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.130435
3	72436157	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.0666667
3	72439938	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.464286
3	72440089	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.235294
3	73001411	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.272727
3	73001417	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.272727
3	73001739	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.266667
3	73002272	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.125
3	73002277	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.125
3	73002331	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.142857
3	73002351	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.166667
3	73005764	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.272727
3	73010242	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.133333
3	73010247	A->G	+	ENSG00000163605	PPP4R2	protein_coding	Intergenic	.	.	Alu	0.125
3	87823804	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	87823850	A->G	+	.	.	.	Intergenic	.	.	Alu	1
3	88066310	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	88066312	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.454545
3	88066318	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.2
3	88066319	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.25
3	88066443	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.272727
3	88066494	A->G	+	ENSG00000163320	CGGBP1	protein_coding	Intergenic	.	.	Alu	0.6
3	88164258	A->G	+	ENSG00000179021	C3orf38	protein_coding	Intergenic	.	.	Alu	0.2
4	15624096	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.176471
4	15624097	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.1875
4	15633730	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.125
4	15633800	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.26087
4	15633803	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.136364
4	15633842	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.166667
4	15635509	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.190476
4	15635528	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.166667
4	15635591	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.1875
4	15640071	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.2
4	16010618	A->G	-	ENSG00000007062	PROM1	protein_coding	Intergenic	.	.	Alu	0.636364
4	16010667	A->G	-	ENSG00000007062	PROM1	protein_coding	Intergenic	.	.	Alu	0.142857
4	16220566	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.2
4	16220583	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.142857
4	16220586	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.363636
4	16220637	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.318182
4	16220640	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	16220654	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.285714
4	16220662	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.130435
4	16220933	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.344828
4	16220942	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.37037
4	16220984	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.105263
4	16220985	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.111111
4	16221013	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.142857
4	16221020	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.142857
4	16221197	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	16221238	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.206897
4	16221242	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.259259
4	16221263	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.142857
4	16221290	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.192308
4	16221293	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.117647
4	16221304	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	16221329	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.166667
4	16221398	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.0555556
4	17592018	A->G	+	ENSG00000002549	LAP3	protein_coding	Intergenic	.	.	Alu	0.181818
4	25148108	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.181818
4	25148109	A->G	-	ENSG00000109618	SEPSECS	protein_coding	Intergenic	.	.	Alu	0.272727
4	26869646	A->G	+	ENSG00000109689	STIM2	protein_coding	Intergenic	.	.	Alu	0.133333
4	37680739	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.153846
4	37683591	A->G	-	ENSG00000181826	RELL1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	38676254	A->G	+	ENSG00000109787	KLF3	protein_coding	Intergenic	.	.	Alu	0.142857
4	39047185	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.125
4	39048773	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.416667
4	39048881	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.157895
4	39048885	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.0952381
4	39097875	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.2
4	39097929	A->G	+	ENSG00000109790	KLHL5	protein_coding	Intergenic	.	.	Alu	0.357143
4	39326091	A->G	-	ENSG00000035928	RFC1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	39326145	A->G	-	ENSG00000035928	RFC1	protein_coding	Intergenic	.	.	Alu	0.125
4	39701825	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.208333
4	39701838	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.16
4	39701890	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.0952381
4	39702022	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.157895
4	39702023	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.210526
4	39703391	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39703393	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39703468	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.285714
4	39704136	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.214286
4	39704168	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.142857
4	39704591	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.142857
4	39704653	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.105263
4	39704682	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.105263
4	39705275	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39705298	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39705757	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.125
4	39706572	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39711422	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39711423	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39711424	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39712488	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.222222
4	39712491	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.125
4	39713932	A->G	+	ENSG00000249019	AC108471.1	processed_pseudogene	Intergenic	.	.	Alu	0.166667
4	39713935	A->G	+	ENSG00000249019	AC108471.1	processed_pseudogene	Intergenic	.	.	Alu	0.153846
4	39716458	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.5
4	39716675	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.153846
4	39716679	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.583333
4	39720836	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39720947	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.0909091
4	39720952	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.105263
4	39721942	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.142857
4	39721986	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.125
4	39721991	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.142857
4	39722889	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39722896	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.272727
4	39731127	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39731145	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39734205	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.181818
4	39734206	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.4
4	39735258	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39735260	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39735265	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.25
4	39751152	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.166667
4	39751165	A->G	+	ENSG00000078140	UBE2K	protein_coding	Intergenic	.	.	Alu	0.2
4	39851410	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.153846
4	39851419	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.153846
4	39851423	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39851437	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39854240	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.545455
4	39860402	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.384615
4	39868223	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39868425	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	39868431	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.416667
4	39868466	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.3
4	39869206	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.111111
4	39869241	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.307692
4	39897313	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.25
4	39897522	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.333333
4	39897523	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	39897607	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.176471
4	39908953	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.4
4	39909222	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.636364
4	39909223	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.4
4	39909233	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39909262	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.26087
4	39909318	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.0714286
4	39909397	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.176471
4	39910915	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.142857
4	39910921	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.105263
4	39911588	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.214286
4	39911684	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.285714
4	39911769	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.230769
4	39913229	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.142857
4	39913245	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.5
4	39913248	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.1875
4	39913249	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.375
4	39913306	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.384615
4	39913351	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	39913374	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39916783	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.3
4	39937627	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	39940070	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39954932	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	39958657	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
4	39958746	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.307692
4	39959454	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.5
4	39963677	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.133333
4	39963975	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.25
4	39964009	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.166667
4	40085906	A->G	+	ENSG00000078177	N4BP2	protein_coding	Intergenic	.	.	Alu	0.166667
4	40207087	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.125
4	40214009	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.0952381
4	40215800	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.125
4	40215832	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.1
4	40216254	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.0909091
4	40225010	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.0810811
4	40230139	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.142857
4	40230145	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.133333
4	40230222	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.363636
4	40230225	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.3
4	42558984	A->G	-	ENSG00000124406	ATP8A1	protein_coding	Intergenic	.	.	Alu	0.3
4	43673588	A->G	+	.	.	.	Intergenic	.	.	Alu	1
4	48143975	A->G	-	ENSG00000135605	TEC	protein_coding	Intergenic	.	.	Alu	0.357143
4	48385708	A->G	+	ENSG00000109171	SLAIN2	protein_coding	Intergenic	.	.	Alu	0.181818
4	48385762	A->G	+	ENSG00000109171	SLAIN2	protein_coding	Intergenic	.	.	Alu	0.153846
4	48385782	A->G	+	ENSG00000109171	SLAIN2	protein_coding	Intergenic	.	.	Alu	0.153846
4	48393533	A->G	+	ENSG00000109171	SLAIN2	protein_coding	Intergenic	.	.	Alu	0.3
4	48834514	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.3
4	48834624	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.25
4	48834644	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.166667
4	48834650	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.2
4	48834651	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.363636
4	48857765	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.363636
4	48857781	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.333333
4	48857787	A->G	+	ENSG00000109180	OCIAD1	protein_coding	Intergenic	.	.	Alu	0.25
4	48904328	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.454545
4	53430572	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.363636
4	53430575	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.272727
4	53432134	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.3
4	54040535	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.0869565
4	54040538	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.35
4	54040553	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.125
4	54041098	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.2
4	54041104	A->G	-	ENSG00000109220	CHIC2	protein_coding	Intergenic	.	.	Alu	0.2
4	55400622	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.230769
4	55400629	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.4
4	55400644	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.416667
4	55402063	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.142857
4	55402587	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.2
4	56474600	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.272727
4	56482350	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.2
4	56494638	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.181818
4	56494647	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.2
4	56914189	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.133333
4	56914768	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.133333
4	56917343	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.181818
4	56918788	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.181818
4	56920498	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.25
4	56920507	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.2
4	56920577	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.125
4	56920615	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.181818
4	56920619	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.538462
4	56920669	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.153846
4	56921007	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.2
4	56921063	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.1875
4	56923518	A->G	+	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.133333
4	56963234	A->G	-	ENSG00000084093	REST	protein_coding	Intergenic	.	.	Alu	0.272727
4	57007360	A->G	+	ENSG00000047315	POLR2B	protein_coding	Intergenic	.	.	Alu	0.75
4	57007365	A->G	+	ENSG00000047315	POLR2B	protein_coding	Intergenic	.	.	Alu	0.117647
4	57007428	A->G	+	ENSG00000047315	POLR2B	protein_coding	Intergenic	.	.	Alu	0.0869565
4	57007430	A->G	+	ENSG00000047315	POLR2B	protein_coding	Intergenic	.	.	Alu	0.1
4	57008228	A->G	+	ENSG00000047315	POLR2B	protein_coding	Intergenic	.	.	Alu	0.583333
4	57108666	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.133333
4	57109237	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.117647
4	57109327	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.2
4	57109331	A->G	-	ENSG00000163453	IGFBP7	protein_coding	Intergenic	.	.	Alu	0.3
4	67474161	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.181818
4	67474162	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.636364
4	67474197	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.125
4	67474255	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.454545
4	67474314	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.5
4	67474329	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.2
4	67483275	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.461538
4	67483296	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.166667
4	67483306	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.181818
4	67483346	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.466667
4	67483348	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.3125
4	67517238	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.269231
4	67517272	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.125
4	67517300	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.26087
4	67517308	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.136364
4	67517326	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.5
4	67517330	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.0909091
4	67517365	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.166667
4	67517381	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.1875
4	67517387	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.1875
4	67517389	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.25
4	67517581	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.0833333
4	67517593	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.0909091
4	67517621	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.230769
4	67517633	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.125
4	67517661	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.25
4	67517672	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.142857
4	67517687	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.214286
4	67517690	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.363636
4	67517714	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.111111
4	67517716	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.176471
4	67517774	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.125
4	67517790	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.416667
4	67647201	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.157895
4	67686767	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.5
4	67687157	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.181818
4	67687211	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.133333
4	67698848	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.166667
4	67698860	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.230769
4	67699804	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.125
4	68317015	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.0377358
4	68317210	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.192308
4	68317218	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.0555556
4	68318375	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.031746
4	68318387	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.0588235
4	68326664	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.125
4	68326667	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.333333
4	68326680	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.142857
4	68326683	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	1
4	68326696	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.230769
4	68327153	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.571429
4	68327176	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.178571
4	68327179	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.310345
4	68327205	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.128205
4	68327233	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.369565
4	68327235	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.130435
4	68335937	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.52381
4	70708944	A->G	+	ENSG00000018189	RUFY3	protein_coding	Intergenic	.	.	Alu	0.3
4	70828985	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	70829012	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.125
4	70829049	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.133333
4	70829086	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	70829110	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.206897
4	70829140	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.25
4	70829141	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.1
4	70829147	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.08
4	70829158	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.103448
4	70829163	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.0666667
4	70829166	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.178571
4	70829421	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.2
4	70829489	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.190476
4	70829532	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.0909091
4	70829554	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
4	70830177	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.238095
4	70830259	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.3
4	70830329	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.363636
4	70830359	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	70830385	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.25
4	70830589	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.2
4	70830646	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.1875
4	70830707	A->G	-	ENSG00000132463	GRSF1	protein_coding	Intergenic	.	.	Alu	0.272727
4	71028410	A->G	+	ENSG00000156136	DCK	protein_coding	Intergenic	.	.	Alu	0.166667
4	73197638	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.214286
4	73240379	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.117647
4	73240422	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.666667
4	73240503	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.3
4	73240530	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.181818
4	73250792	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.25
4	73250812	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.133333
4	73250881	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.368421
4	73250883	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.2
4	73250884	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.1
4	73251103	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.0869565
4	73251105	A->G	-	ENSG00000132466	ANKRD17	protein_coding	Intergenic	.	.	Alu	0.115385
4	74450318	A->G	+	ENSG00000109321	AREG	protein_coding	Intergenic	.	.	Alu	1
4	75663424	A->G	-	ENSG00000138757	G3BP2	protein_coding	Intergenic	.	.	Alu	0.117647
4	75664835	A->G	-	ENSG00000138757	G3BP2	protein_coding	Intergenic	.	.	Alu	0.125
4	75665516	A->G	-	ENSG00000138757	G3BP2	protein_coding	Intergenic	.	.	Alu	0.222222
4	76140465	A->G	-	ENSG00000138750	NUP54	protein_coding	Intergenic	.	.	Alu	0.181818
4	77056793	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.181818
4	77061865	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.3
4	77067927	A->G	-	ENSG00000118816	CCNI	protein_coding	Intergenic	.	.	Alu	0.210526
4	77772429	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.125
4	77778426	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.4
4	77778428	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.363636
4	77778610	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.363636
4	77778611	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.181818
4	77778642	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.6
4	77778655	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.2
4	77779958	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.25
4	77780974	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.333333
4	77782393	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.0869565
4	77786055	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.09375
4	77786064	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.09375
4	77786181	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.133333
4	77786369	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.117647
4	77786442	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.0952381
4	77786504	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.333333
4	77786509	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.2
4	77787109	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.181818
4	77790813	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.111111
4	77790848	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.133333
4	77790915	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.333333
4	77791112	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.142857
4	77791153	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.304348
4	77791156	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.263158
4	77791272	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.142857
4	77791274	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.227273
4	77793946	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.115385
4	77795157	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.153846
4	77795158	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.153846
4	77795184	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.153846
4	77795192	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.153846
4	77796837	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.0571429
4	77796860	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.0833333
4	77796864	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.171429
4	77796876	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.075
4	77796889	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.0588235
4	79954245	A->G	-	ENSG00000163297	ANTXR2	protein_coding	Intergenic	.	.	Alu	0.727273
4	82835078	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.2
4	82835599	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.133333
4	82841206	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.230769
4	82841936	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.176471
4	82883707	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.4
4	82896382	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.3125
4	82896411	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.176471
4	82896419	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.125
4	82896587	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.24
4	82896610	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.0588235
4	82896611	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.0588235
4	82896647	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.413793
4	83052680	A->G	+	ENSG00000138663	COPS4	protein_coding	Intergenic	.	.	Alu	0.272727
4	83111103	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.117647
4	83111168	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.157895
4	83111468	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.363636
4	83111469	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.363636
4	83112050	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.2
4	87052152	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.105263
4	87052153	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.105263
4	87101312	A->G	+	ENSG00000172493	AFF1	protein_coding	Intergenic	.	.	Alu	0.181818
4	88017706	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.153846
4	88023224	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.3
4	88023228	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.3
4	88023244	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.363636
4	88039474	A->G	+	ENSG00000118762	PKD2	protein_coding	Intergenic	.	.	Alu	0.166667
4	88280191	A->G	-	ENSG00000163644	PPM1K	protein_coding	Intergenic	.	.	Alu	0.263158
4	88280213	A->G	-	ENSG00000163644	PPM1K	protein_coding	Intergenic	.	.	Alu	0.333333
4	88280236	A->G	-	ENSG00000163644	PPM1K	protein_coding	Intergenic	.	.	Alu	0.111111
4	88280614	A->G	-	ENSG00000163644	PPM1K	protein_coding	Intergenic	.	.	Alu	0.142857
4	88280680	A->G	-	ENSG00000163644	PPM1K	protein_coding	Intergenic	.	.	Alu	0.111111
4	98368917	A->G	+	ENSG00000138698	RAP1GDS1	protein_coding	Intergenic	.	.	Alu	0.3
4	98369138	A->G	+	ENSG00000138698	RAP1GDS1	protein_coding	Intergenic	.	.	Alu	0.454545
4	98883189	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.181818
4	98883855	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.666667
4	98885616	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.15
4	98885627	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.157895
4	98885671	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.210526
4	98885711	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.136364
4	98885731	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.176471
4	98886116	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.25
4	98913578	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.3
4	98923477	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.125
4	99916241	A->G	-	ENSG00000164031	DNAJB14	protein_coding	Intergenic	.	.	Alu	0.545455
5	10358574	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.333333
5	10358575	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.142857
5	10358682	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.615385
5	10359859	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.333333
5	10359885	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.117647
5	10360219	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.285714
5	10407796	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
5	10408613	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.230769
5	10408651	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.285714
5	14191363	A->G	+	ENSG00000038382	TRIO	protein_coding	Intergenic	.	.	Alu	0.3
5	32155214	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.137931
5	32155413	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0731707
5	32155417	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.121951
5	32155419	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.205128
5	32155432	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.09375
5	32155437	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0689655
5	32155713	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.105263
5	32156263	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.192308
5	32156420	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0666667
5	32163461	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.133333
5	32165324	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0909091
5	32165326	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.227273
5	32165338	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0952381
5	32165500	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.15
5	32165577	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.166667
5	32167239	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.4
5	32167409	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.176471
5	32167427	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.166667
5	32167444	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0555556
5	32167451	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.0967742
5	32167706	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.157895
5	32167707	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.117647
5	32167904	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.266667
5	32279288	A->G	-	ENSG00000150712	MTMR12	protein_coding	Intergenic	.	.	Alu	0.181818
5	32285128	A->G	-	ENSG00000150712	MTMR12	protein_coding	Intergenic	.	.	Alu	0.166667
5	32295908	A->G	-	ENSG00000150712	MTMR12	protein_coding	Intergenic	.	.	Alu	0.272727
5	32368515	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2
5	32382136	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.166667
5	32382163	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.166667
5	32384899	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	1
5	32392777	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.333333
5	32392792	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.133333
5	32392883	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.117647
5	32393515	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.166667
5	32399175	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.4
5	32427188	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.111111
5	32429191	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.285714
5	32429258	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.125
5	32429422	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.230769
5	32432221	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0909091
5	32432261	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.238095
5	32432262	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.136364
5	32432933	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0952381
5	32433004	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.0869565
5	32433396	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2
5	32433406	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.157895
5	32433987	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.181818
5	32433993	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.142857
5	32440444	A->G	-	ENSG00000056097	ZFR	protein_coding	Intergenic	.	.	Alu	0.2
5	32589307	A->G	+	ENSG00000113387	SUB1	protein_coding	Intergenic	.	.	Alu	0.185185
5	33450929	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.2
5	33451001	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.153846
5	33451028	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.266667
5	33451034	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.166667
5	33464110	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.25
5	33464164	A->G	+	ENSG00000113407	TARS	protein_coding	Intergenic	.	.	Alu	0.25
5	33471269	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	34196311	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
5	34196334	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
5	34196339	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
5	34219917	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	1
5	34941331	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.181818
5	34952893	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.5625
5	34952895	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.4
5	34952948	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.133333
5	34952950	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.153846
5	34952970	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.272727
5	34952988	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.142857
5	34953082	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.25
5	34953313	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.153846
5	34953341	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.25
5	35870486	A->G	+	ENSG00000168685	IL7R	protein_coding	Intergenic	.	.	Alu	1
5	37050304	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.181818
5	37050370	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.272727
5	38949576	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.181818
5	38968526	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.190476
5	38968541	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.210526
5	38968547	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.0952381
5	38968582	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.15
5	38968583	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.35
5	38968614	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.222222
5	38968616	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.157895
5	38968622	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.6875
5	38968626	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.538462
5	38968707	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.25
5	40766805	A->G	-	ENSG00000132356	PRKAA1	protein_coding	Intergenic	.	.	Alu	0.181818
5	40766815	A->G	-	ENSG00000132356	PRKAA1	protein_coding	Intergenic	.	.	Alu	0.153846
5	40767126	A->G	-	ENSG00000132356	PRKAA1	protein_coding	Intergenic	.	.	Alu	0.210526
5	40767152	A->G	-	ENSG00000132356	PRKAA1	protein_coding	Intergenic	.	.	Alu	0.230769
5	43052317	A->G	+	ENSG00000177738	AC025171.1	sense_overlapping	Intergenic	.	.	Alu	0.2
5	43072032	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.153846
5	43072041	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.142857
5	43072054	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.375
5	43125330	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.625
5	43125340	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.461538
5	43125552	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.6
5	43125556	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.8
5	43128536	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.272727
5	43128542	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.181818
5	43128951	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.45
5	43129133	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.105263
5	43129145	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.173913
5	43129334	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0571429
5	43129352	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.0526316
5	43133354	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.133333
5	43134838	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.133333
5	43134862	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.153846
5	43135632	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.352941
5	43135638	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.117647
5	43135860	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.214286
5	43135862	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.357143
5	43136594	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.230769
5	43136733	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.105263
5	43140820	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43141720	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.142857
5	43141727	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.307692
5	43142831	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.230769
5	43147933	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.2
5	43147986	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.4
5	43544048	A->G	-	ENSG00000172239	PAIP1	protein_coding	Intergenic	.	.	Alu	0.272727
5	50413587	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.0833333
5	50413588	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.0869565
5	50413687	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.26087
5	50413713	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.235294
5	50413714	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.411765
5	50413782	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.153846
5	50414304	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.147059
5	50414307	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.735294
5	50414308	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.0571429
5	50414333	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.55
5	50414345	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.133333
5	50414352	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.636364
5	50414478	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.2
5	50414484	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.2
5	50433600	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.666667
5	50437060	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.153846
5	50697180	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.4
5	50732663	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.5
5	50732698	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.266667
5	50733157	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.117647
5	50733161	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.4
5	50733181	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.166667
5	50747018	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.133333
5	50747853	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.166667
5	55431975	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.3
5	55433076	A->G	+	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	55528798	A->G	-	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	1
5	55528849	A->G	-	ENSG00000067113	PLPP1	protein_coding	Intergenic	.	.	Alu	0.9375
5	55953466	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.15
5	55953486	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.3
5	55953487	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.315789
5	55953527	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.105263
5	55953550	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.782609
5	55953554	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.347826
5	55953771	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.0833333
5	55953833	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.238095
5	55953838	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.15
5	55953839	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.5
5	55953843	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.0952381
5	55953847	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.272727
5	55953905	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.181818
5	55953911	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.608696
5	55953951	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.15
5	55953956	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.192308
5	55958134	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.133333
5	55974705	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.133333
5	56926968	A->G	-	ENSG00000155545	MIER3	protein_coding	Intergenic	.	.	Alu	0.2
5	56927000	A->G	-	ENSG00000155545	MIER3	protein_coding	Intergenic	.	.	Alu	0.294118
5	56927071	A->G	-	ENSG00000155545	MIER3	protein_coding	Intergenic	.	.	Alu	0.416667
5	56945280	A->G	-	ENSG00000235635	AC016644.1	antisense	Intergenic	.	.	Alu	0.181818
5	56946721	A->G	-	ENSG00000235635	AC016644.1	antisense	Intergenic	.	.	Alu	1
5	57183937	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	57186155	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.2
5	57189171	A->G	+	ENSG00000062194	GPBP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	62312806	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.117647
5	62314057	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.125
5	62314066	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.111111
5	62321586	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.15
5	62322053	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.142857
5	62330095	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.181818
5	62338392	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.166667
5	62338473	A->G	+	ENSG00000068796	KIF2A	protein_coding	Intergenic	.	.	Alu	0.2
5	65580697	A->G	+	ENSG00000113593	PPWD1	protein_coding	Intergenic	.	.	Alu	0.307692
5	65581403	A->G	+	ENSG00000113593	PPWD1	protein_coding	Intergenic	.	.	Alu	0.117647
5	65581483	A->G	+	ENSG00000113593	PPWD1	protein_coding	Intergenic	.	.	Alu	0.333333
5	65581535	A->G	+	ENSG00000113593	PPWD1	protein_coding	Intergenic	.	.	Alu	0.103448
5	65581543	A->G	+	ENSG00000113593	PPWD1	protein_coding	Intergenic	.	.	Alu	0.0689655
5	65627439	A->G	+	ENSG00000253251	SHLD3	protein_coding	Intergenic	.	.	Alu	0.307692
5	65627452	A->G	+	ENSG00000253251	SHLD3	protein_coding	Intergenic	.	.	Alu	0.142857
5	65627506	A->G	+	ENSG00000253251	SHLD3	protein_coding	Intergenic	.	.	Alu	0.181818
5	65938825	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.117647
5	65946096	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.166667
5	65946156	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.142857
5	65946163	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.117647
5	65948292	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.153846
5	65948317	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.153846
5	65948429	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.2
5	66004452	A->G	+	ENSG00000112851	ERBIN	protein_coding	Intergenic	.	.	Alu	0.2
5	66148662	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.2
5	66151041	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.08
5	66151103	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	66151109	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.0810811
5	66151117	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.0512821
5	68235241	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	68236456	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.25
5	68240633	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	1
5	69366903	A->G	-	ENSG00000085231	AK6	protein_coding	Intergenic	.	.	Alu	0.1875
5	69367018	A->G	-	ENSG00000085231	AK6	protein_coding	Intergenic	.	.	Alu	0.636364
5	69367269	A->G	-	ENSG00000085231	AK6	protein_coding	Intergenic	.	.	Alu	0.0952381
5	69367753	A->G	-	ENSG00000085231	AK6	protein_coding	Intergenic	.	.	Alu	0.133333
5	70075628	A->G	+	ENSG00000205571	SMN2	protein_coding	Intergenic	.	.	Alu	0.142857
5	70075710	A->G	+	ENSG00000205571	SMN2	protein_coding	Intergenic	.	.	Alu	0.105263
5	70075933	A->G	+	ENSG00000205571	SMN2	protein_coding	Intergenic	.	.	Alu	0.153846
5	70218663	A->G	-	.	.	.	Intergenic	.	.	Alu	0.818182
5	72851593	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.166667
5	72851618	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	72851637	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.166667
5	72851756	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.142857
5	72853226	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	72853305	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.272727
5	72853311	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
5	72853315	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	72855135	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.181818
5	72855136	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.166667
5	72856285	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
5	72856295	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
5	72856332	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.153846
5	72861584	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.166667
5	72861638	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.133333
5	72862427	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.142857
5	72870209	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.357143
5	72870254	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.1875
5	72870260	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.176471
5	72870261	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.176471
5	72879570	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.2
5	72890877	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.153846
5	72890878	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.307692
5	72890885	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.153846
5	72890940	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	72890966	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.1
5	72890971	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.15
5	72890993	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.315789
5	72891415	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.166667
5	72905639	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.15
5	72905640	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.210526
5	72905737	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.142857
5	72905817	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.214286
5	72905872	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.125
5	72906392	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.3
5	72906439	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.1875
5	72906457	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.125
5	72906475	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.117647
5	76408105	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.25
5	76416865	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	76416941	A->G	+	ENSG00000145703	IQGAP2	protein_coding	Intergenic	.	.	Alu	0.25
5	78229071	A->G	-	ENSG00000132842	AP3B1	protein_coding	Intergenic	.	.	Alu	0.3
5	79293533	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.272727
5	79637480	A->G	+	ENSG00000164329	TENT2	protein_coding	Intergenic	.	.	Alu	0.142857
5	79646958	A->G	+	ENSG00000164329	TENT2	protein_coding	Intergenic	.	.	Alu	0.117647
5	87382049	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.0952381
5	87383072	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.153846
5	87397231	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.111111
5	87398784	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.222222
5	87398849	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.142857
5	87398851	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.142857
5	87398861	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.181818
5	93973087	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
5	94023447	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.363636
5	94029972	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.25
5	94030077	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.4
5	94030736	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.181818
5	94033025	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.333333
5	94033086	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.142857
5	94033174	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
5	94033179	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.333333
5	94044952	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.2
5	94044962	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.142857
5	94049710	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.380952
5	94049721	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.0909091
5	94049739	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.166667
5	94049815	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.444444
5	94049819	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.266667
5	94050037	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.0909091
5	94050042	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.142857
5	94050094	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.111111
5	94050351	A->G	-	ENSG00000113391	FAM172A	protein_coding	Intergenic	.	.	Alu	0.166667
5	96906037	A->G	+	ENSG00000164308	ERAP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	96995622	A->G	+	ENSG00000113441	LNPEP	protein_coding	Intergenic	.	.	Alu	0.5
5	98861969	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98862045	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.333333
5	98862231	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98867875	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.304348
5	98867940	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.666667
5	98867941	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.173913
5	98867977	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.130435
5	98868205	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.26087
5	98868258	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.105263
5	98868277	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98868281	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.214286
5	98891136	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	98891145	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.133333
5	98891554	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.157895
5	98891576	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	98891619	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	98891654	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98891754	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.545455
5	98891775	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	98894924	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	98894933	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.115385
5	98894999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
5	98895000	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
5	98895003	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	98895628	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0434783
5	98895670	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	98895985	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	98896049	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	98896083	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	98918640	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.461538
5	98918656	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98918659	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.176471
5	98918660	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.444444
5	98918725	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.107143
5	98918740	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98923445	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	98923450	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	98923518	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.121212
5	98923526	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0555556
5	98923532	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.3125
5	98923536	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.176471
5	98923582	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.08
5	98923583	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.185185
5	98923589	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	98923592	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.178571
5	98923596	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	98923608	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98923615	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.55
5	98923686	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.176471
5	98923694	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
5	98923997	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0454545
5	98923999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.322581
5	98924035	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0555556
5	98924073	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.133333
5	98924076	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	98924083	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0512821
5	98924150	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0930233
5	98924161	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.352941
5	98924199	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.264706
5	98924215	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.44
5	98924237	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	98924245	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.380952
5	98925296	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0483871
5	98925328	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.028169
5	98925334	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0422535
5	98925343	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0517241
6	12041687	A->G	+	ENSG00000095951	HIVEP1	protein_coding	Intergenic	.	.	Alu	0.142857
6	13638648	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.307692
6	13646404	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.133333
6	13646409	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.133333
6	13648324	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.0952381
6	13648352	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.153846
6	13650888	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.0869565
6	13651533	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.272727
6	13685806	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.2
6	13689121	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.2
6	13689439	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.111111
6	13689477	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.125
6	13689506	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.1
6	13689534	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.117647
6	13689568	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.266667
6	13690984	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.2
6	13691887	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.636364
6	13691895	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.333333
6	13707148	A->G	-	ENSG00000010017	RANBP9	protein_coding	Intergenic	.	.	Alu	0.272727
6	14121547	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0833333
6	15251129	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.3125
6	15251141	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.307692
6	15251151	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.25
6	15255288	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.636364
6	15270692	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15273651	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15291027	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.3
6	15291192	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15292731	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15292732	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15302345	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.333333
6	15324616	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	16734562	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.2
6	16734573	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.272727
6	16734584	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.166667
6	16735779	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.142857
6	16735784	A->G	-	ENSG00000124788	ATXN1	protein_coding	Intergenic	.	.	Alu	0.133333
6	17640821	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.1875
6	17654382	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0952381
6	17656119	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.181818
6	17656123	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.181818
6	17657548	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0740741
6	17658225	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0952381
6	17658233	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.08
6	17658239	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.08
6	17658296	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0909091
6	17658313	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.12
6	17658355	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.142857
6	17659584	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.08
6	17659611	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0833333
6	17659624	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.227273
6	17661214	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.105263
6	17661257	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.0833333
6	17665849	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.105263
6	17666116	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.166667
6	17668585	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.153846
6	17669903	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.166667
6	18250675	A->G	-	ENSG00000124795	DEK	protein_coding	Intergenic	.	.	Alu	0.2
6	18250699	A->G	-	ENSG00000124795	DEK	protein_coding	Intergenic	.	.	Alu	0.272727
6	20405570	A->G	+	ENSG00000112242	E2F3	protein_coding	Intergenic	.	.	Alu	0.153846
6	20435240	A->G	+	ENSG00000112242	E2F3	protein_coding	Intergenic	.	.	Alu	0.2
6	24706655	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.133333
6	24706677	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.4
6	24706691	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.117647
6	24706746	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.357143
6	24707486	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0869565
6	24707514	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.105263
6	24707522	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.185185
6	24707606	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.176471
6	24707759	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0952381
6	24707889	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.3
6	24707911	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.230769
6	24708452	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.08
6	24708476	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.210526
6	24708541	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.125
6	24708554	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.111111
6	24708593	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.384615
6	24710462	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0240964
6	24710794	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0869565
6	24710916	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.102564
6	25017239	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.117647
6	25020968	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	25030761	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.12
6	25030910	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.1
6	25033082	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.357143
6	25033096	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.142857
6	25033104	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.357143
6	25033109	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.230769
6	29933935	A->G	+	.	.	.	Intergenic	.	.	Alu	0.818182
6	29943642	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intergenic	.	.	Alu	1
6	29945334	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intergenic	.	.	Alu	0.37037
6	30192654	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.272727
6	30199903	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.416667
6	30200026	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.105263
6	30200027	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.210526
6	30200036	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.2
6	30200160	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.3
6	30200165	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.65
6	30200170	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.15
6	30200225	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.12
6	30200232	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.1875
6	30200235	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.25
6	30200241	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.684211
6	30200276	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.625
6	30201785	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.2
6	30201809	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.166667
6	30204991	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.153846
6	30491933	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0227273
6	30491936	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0537634
6	30491983	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0347826
6	30492012	A->G	+	ENSG00000204592	HLA-E	protein_coding	Intergenic	.	.	Alu	0.0231214
6	30575888	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.2
6	30578987	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.333333
6	30578988	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.153846
6	30587383	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.2
6	30587407	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.272727
6	30589160	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.125
6	30589182	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.117647
6	30589188	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.166667
6	30677999	A->G	-	ENSG00000146112	PPP1R18	protein_coding	Intergenic	.	.	Alu	0.25
6	30678039	A->G	-	ENSG00000146112	PPP1R18	protein_coding	Intergenic	.	.	Alu	0.142857
6	31839068	A->G	+	ENSG00000204387	C6orf48	protein_coding	Intergenic	.	.	Alu	0.4
6	32665714	A->G	-	ENSG00000179344	HLA-DQB1	protein_coding	Intergenic	.	.	Alu	0.166667
6	33306713	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.1
6	33306816	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.25
6	33307179	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.173913
6	33307180	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.173913
6	33307205	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.153846
6	33307274	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.407407
6	33307487	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.0952381
6	33307566	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.181818
6	33308088	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.0833333
6	33309325	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.105263
6	33309444	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.24
6	33309461	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.227273
6	33310262	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.125
6	33310318	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.4
6	33310323	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.357143
6	33310406	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.166667
6	34335834	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.2
6	34335861	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.545455
6	34357519	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.230769
6	34381145	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.3
6	34381149	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.25
6	34385916	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.2
6	34390594	A->G	-	ENSG00000272325	NUDT3	protein_coding	Intergenic	.	.	Alu	0.2
6	34422655	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.1
6	34422662	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.458333
6	34422731	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.181818
6	34422998	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.166667
6	34758180	A->G	+	ENSG00000124562	SNRPC	protein_coding	Intergenic	.	.	Alu	0.272727
6	34882393	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.2
6	34882401	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.1
6	34882764	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.235294
6	34882771	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.15
6	34882777	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.4
6	34885802	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.153846
6	34886538	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.181818
6	35315213	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.12
6	35315257	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.0769231
6	35315259	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.0740741
6	35315895	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.166667
6	35316240	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.1
6	35316243	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.103448
6	35316257	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.151515
6	35316273	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.108108
6	35355226	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.166667
6	35355227	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.181818
6	35355259	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.363636
6	35355279	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.133333
6	35355390	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.181818
6	35355431	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.272727
6	35570276	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	35571149	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
6	35571154	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	35571258	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
6	35571272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	35571278	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
6	35571309	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
6	35571338	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
6	35572552	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	35572598	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
6	35572600	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
6	35588630	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.125
6	35588631	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35641201	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.25
6	35641202	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.166667
6	35641255	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.142857
6	35641256	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.153846
6	35641277	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.166667
6	35641760	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.133333
6	35641761	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.133333
6	35642335	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35642401	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.357143
6	35648475	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.785714
6	35648477	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.133333
6	35648479	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.733333
6	35648480	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.142857
6	35648495	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.235294
6	35648537	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.166667
6	35648546	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.461538
6	35648698	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.178571
6	35648731	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.1
6	35648732	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.105263
6	35648761	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.615385
6	35648764	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.25
6	35648781	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35648783	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.8
6	35648874	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35650093	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.153846
6	35650111	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.25
6	35650145	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.214286
6	35650155	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.461538
6	35650168	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.5
6	35650668	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.272727
6	35650669	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.5
6	35650678	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35650757	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.266667
6	35653334	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.125
6	35667624	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.1
6	35667655	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.142857
6	35670483	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.133333
6	35671115	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.105263
6	35671119	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.222222
6	35671142	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.1
6	35673426	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.1
6	35673455	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.25
6	35680180	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.111111
6	35680346	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0833333
6	35681917	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.08
6	35682822	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35683263	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.25
6	35683267	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	35683304	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.241379
6	35683347	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0625
6	35683348	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0625
6	35683351	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.09375
6	35683372	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0967742
6	35683418	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0588235
6	35683523	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0571429
6	35683589	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0952381
6	35683612	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.230769
6	35684016	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.230769
6	35684048	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.153846
6	35684050	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.384615
6	35684241	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	35684401	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.1875
6	35684434	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.0869565
6	35684445	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.269231
6	35684782	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.375
6	35685042	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.25
6	35836509	A->G	-	ENSG00000096063	SRPK1	protein_coding	Intergenic	.	.	Alu	0.181818
6	36031450	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.117647
6	36031492	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.0606061
6	36031505	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.0606061
6	36031506	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.0571429
6	36031991	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.0909091
6	36032029	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.142857
6	36036975	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36036976	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36037022	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36042592	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.166667
6	36042677	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.6
6	36042769	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.230769
6	36042977	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.214286
6	36043003	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.777778
6	36043006	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.176471
6	36043059	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36043888	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.0869565
6	36043911	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.130435
6	36043945	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.0833333
6	36044634	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36044660	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36044665	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.533333
6	36044951	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.2
6	36045053	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.111111
6	36045058	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.263158
6	36045074	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.210526
6	36101185	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.384615
6	36101262	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.153846
6	36101317	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.615385
6	36101335	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.4375
6	36101369	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.3125
6	36101382	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.1
6	36101525	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.230769
6	36101530	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.928571
6	36101547	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.4
6	36101555	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.157895
6	36101614	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.117647
6	36101626	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.230769
6	36101639	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.142857
6	36103404	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.181818
6	36103420	A->G	+	ENSG00000112062	MAPK14	protein_coding	Intergenic	.	.	Alu	0.181818
6	36456937	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.214286
6	36456939	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.266667
6	36483733	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.454545
6	36500505	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.1875
6	36500517	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.333333
6	36500518	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.75
6	36500527	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.5
6	36501173	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.181818
6	36501226	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.272727
6	36501232	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.461538
6	36501248	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.692308
6	36501338	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.416667
6	36501618	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.2
6	36502203	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.214286
6	36502205	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.214286
6	36541851	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.2
6	36542532	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.285714
6	36543515	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.3
6	36543906	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.181818
6	36544701	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.363636
6	36544732	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.3
6	36544869	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.125
6	36606122	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
6	36973875	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	1
6	36973888	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.272727
6	36973900	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.4
6	36973919	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.363636
6	36973943	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.5
6	36974015	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.25
6	36974920	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.416667
6	37449080	A->G	+	ENSG00000137200	CMTR1	protein_coding	Intergenic	.	.	Alu	0.272727
6	37449082	A->G	+	ENSG00000137200	CMTR1	protein_coding	Intergenic	.	.	Alu	0.285714
6	37465661	A->G	+	ENSG00000137200	CMTR1	protein_coding	Intergenic	.	.	Alu	0.125
6	37832725	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	37832746	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.214286
6	37832810	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.117647
6	37832898	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.25
6	37844550	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.294118
6	37844554	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.333333
6	37894487	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	37894503	A->G	+	ENSG00000156639	ZFAND3	protein_coding	Intergenic	.	.	Alu	0.307692
6	38560923	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.416667
6	38561054	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.272727
6	38561073	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.25
6	38561552	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.5
6	38561639	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.454545
6	38561815	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.4
6	38561863	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.230769
6	38561906	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.3
6	38561928	A->G	-	ENSG00000183826	BTBD9	protein_coding	Intergenic	.	.	Alu	0.5
6	39306850	A->G	-	ENSG00000124780	KCNK17	protein_coding	Intergenic	.	.	Alu	0.2
6	41993140	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
6	41995803	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.583333
6	41995809	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	42004192	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.454545
6	42004237	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.3
6	42004244	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42004610	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.3
6	42004644	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.363636
6	42004673	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.307692
6	42004703	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42012221	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.230769
6	42012284	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.3
6	42012587	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
6	42012596	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.25
6	42012598	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.333333
6	42014706	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.117647
6	42027318	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.307692
6	42027328	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.538462
6	42027869	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.125
6	42027885	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.384615
6	42029012	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.130435
6	42029101	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.176471
6	42029250	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	42029257	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.125
6	42029272	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.117647
6	42032197	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.166667
6	42032224	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	42032314	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.136364
6	42032333	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.1
6	42032337	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.0909091
6	42032387	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	42033727	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.214286
6	42033737	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	42033749	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.153846
6	42033762	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.111111
6	42033766	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.117647
6	42033812	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
6	42034273	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.636364
6	42034285	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.636364
6	42034286	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42036133	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.142857
6	42036676	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.263158
6	42036677	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.111111
6	42037001	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.363636
6	42037011	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42037776	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
6	42038294	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.1
6	42038356	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.130435
6	42038457	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42042616	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.1
6	42042632	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.285714
6	42042633	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.285714
6	42042649	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.233333
6	42043137	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.1
6	42043281	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.272727
6	42043341	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.181818
6	42043455	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.357143
6	42043487	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.3125
6	42043528	A->G	-	ENSG00000112576	CCND3	protein_coding	Intergenic	.	.	Alu	0.2
6	42203679	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	42203689	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	42203706	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
6	42203738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
6	42204809	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	42204812	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
6	42204813	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
6	42204892	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	42204910	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	42204959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	42205128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	42789412	A->G	+	ENSG00000112624	BICRAL	protein_coding	Intergenic	.	.	Alu	0.166667
6	42936559	A->G	+	ENSG00000137161	CNPY3	protein_coding	Intergenic	.	.	Alu	0.333333
6	42936677	A->G	+	ENSG00000137161	CNPY3	protein_coding	Intergenic	.	.	Alu	0.5
6	42937375	A->G	+	ENSG00000137161	CNPY3	protein_coding	Intergenic	.	.	Alu	0.166667
6	42937417	A->G	+	ENSG00000137161	CNPY3	protein_coding	Intergenic	.	.	Alu	0.3
6	42940227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
6	42940232	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
6	42940280	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
6	42941298	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0952381
6	42941390	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.173913
6	42941506	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.130435
6	42941999	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.105263
6	42942394	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.133333
6	42942878	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	42946373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.2
6	42946953	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.75
6	42946963	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.181818
6	43637198	A->G	+	ENSG00000124688	MAD2L1BP	protein_coding	Intergenic	.	.	Alu	0.181818
6	44406645	A->G	+	ENSG00000096401	CDC5L	protein_coding	Intergenic	.	.	Alu	0.25
6	44406738	A->G	+	ENSG00000096401	CDC5L	protein_coding	Intergenic	.	.	Alu	0.3
6	44406758	A->G	+	ENSG00000096401	CDC5L	protein_coding	Intergenic	.	.	Alu	0.166667
6	44407612	A->G	+	ENSG00000096401	CDC5L	protein_coding	Intergenic	.	.	Alu	0.153846
6	45424948	A->G	+	ENSG00000124813	RUNX2	protein_coding	Intergenic	.	.	Alu	0.5
6	53272432	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.181818
6	53280704	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.230769
6	53284126	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.142857
6	53285737	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.192308
6	53285785	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.166667
6	53285788	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.241379
6	53285864	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.133333
6	53285873	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.2
6	53285879	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.1
6	53286318	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.166667
6	53286327	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.133333
6	53286463	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.4
6	53286468	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.125
6	53289673	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0909091
6	53289713	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0666667
6	53292534	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.136364
6	53292574	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.142857
6	53292667	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.181818
6	53292691	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.25
6	53292704	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0909091
6	53292739	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.210526
6	53292744	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.135135
6	53292753	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.394737
6	53293353	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.0714286
6	53293380	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.142857
6	53293446	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.153846
6	53323645	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.153846
6	53323650	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.384615
6	53323680	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.363636
6	53323993	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.409091
6	57056640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
6	57056974	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	57056979	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	57057036	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
6	57057073	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	57057074	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	57057077	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	57057081	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	57057101	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
6	57057129	A->G	+	.	.	.	Intergenic	.	.	Alu	0.35
6	57057134	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
6	57057148	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
6	57057149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
6	57057643	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
6	57057647	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
6	57057675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
6	57057857	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
6	57057920	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
6	57062789	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
6	57098295	A->G	+	ENSG00000112200	ZNF451	protein_coding	Intergenic	.	.	Alu	0.166667
6	57118512	A->G	+	ENSG00000112200	ZNF451	protein_coding	Intergenic	.	.	Alu	0.2
6	57118515	A->G	+	ENSG00000112200	ZNF451	protein_coding	Intergenic	.	.	Alu	0.2
6	57118583	A->G	+	ENSG00000112200	ZNF451	protein_coding	Intergenic	.	.	Alu	0.153846
6	57118689	A->G	+	ENSG00000112200	ZNF451	protein_coding	Intergenic	.	.	Alu	0.142857
6	57133709	A->G	+	ENSG00000112200	ZNF451	protein_coding	Intergenic	.	.	Alu	0.133333
6	63674876	A->G	+	ENSG00000118482	PHF3	protein_coding	Intergenic	.	.	Alu	0.1875
6	63688063	A->G	+	ENSG00000118482	PHF3	protein_coding	Intergenic	.	.	Alu	0.7
6	63688069	A->G	+	ENSG00000118482	PHF3	protein_coding	Intergenic	.	.	Alu	0.2
6	69761113	A->G	-	ENSG00000168216	LMBRD1	protein_coding	Intergenic	.	.	Alu	0.2
6	73436668	A->G	-	ENSG00000164430	CGAS	protein_coding	Intergenic	.	.	Alu	0.166667
6	73436724	A->G	-	ENSG00000164430	CGAS	protein_coding	Intergenic	.	.	Alu	0.166667
6	73436750	A->G	-	ENSG00000164430	CGAS	protein_coding	Intergenic	.	.	Alu	0.363636
6	73449232	A->G	-	ENSG00000164430	CGAS	protein_coding	Intergenic	.	.	Alu	0.230769
6	75238881	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.176471
6	75238922	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.1
6	75238926	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.1
6	75238943	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.142857
6	75609953	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.133333
6	75612582	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.272727
6	75616943	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.285714
6	75617015	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.230769
6	75617021	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.285714
6	75636966	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.222222
6	75636968	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.111111
6	75636981	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.15
6	75637014	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.266667
6	75637069	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.176471
6	75637083	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.352941
6	75638829	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.130435
6	75638979	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.111111
6	75638984	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.166667
6	75638990	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.277778
6	75641705	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.0645161
6	75641716	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.235294
6	75641720	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.212121
6	75641722	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.0588235
6	75641723	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.114286
6	75641746	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.230769
6	75641796	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.0625
6	75643586	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.0833333
6	75644506	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.6875
6	75644707	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.2
6	75644720	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.307692
6	75644747	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.153846
6	75644759	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.714286
6	75644765	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.1875
6	75653111	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.181818
6	78935867	A->G	-	ENSG00000146243	IRAK1BP1	protein_coding	Intergenic	.	.	Alu	0.4
6	79004471	A->G	-	ENSG00000146247	PHIP	protein_coding	Intergenic	.	.	Alu	0.222222
6	79223261	A->G	-	ENSG00000118418	HMGN3	protein_coding	Intergenic	.	.	Alu	0.111111
6	79223267	A->G	-	ENSG00000118418	HMGN3	protein_coding	Intergenic	.	.	Alu	0.111111
6	79223322	A->G	-	ENSG00000118418	HMGN3	protein_coding	Intergenic	.	.	Alu	0.181818
6	85616428	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.2
6	85625591	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.130435
6	85625658	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0714286
6	85625659	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.111111
6	85627156	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.5
6	85627181	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.166667
6	85633209	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.105263
6	85633544	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.103448
6	85633853	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.0588235
6	85635658	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.15
6	87158410	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.222222
6	87158412	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.421053
6	87158419	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.105263
6	87158531	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.125
6	87158553	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.4
6	87158606	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87159382	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.0833333
6	87159567	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.533333
6	87159603	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.214286
6	87159632	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.230769
6	87159642	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.153846
6	87159739	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.105263
6	87159740	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.157895
6	87159741	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.315789
6	87159753	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.111111
6	87167521	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.105263
6	87175436	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.181818
6	87186601	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.25
6	87186607	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.181818
6	87229626	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.545455
6	87229669	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.294118
6	87229686	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.222222
6	87229687	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.176471
6	87229688	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.25
6	87237315	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.210526
6	87237359	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.133333
6	87237381	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.5
6	87237422	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.3125
6	87237431	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.529412
6	87238216	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.111111
6	87238231	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.0952381
6	87238255	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.105263
6	87238277	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.16
6	87238286	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.08
6	87238291	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.0833333
6	87238311	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.0869565
6	87238322	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.107143
6	87238325	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.0625
6	87238339	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.148148
6	87238365	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.125
6	87238366	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.352941
6	87240231	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.130435
6	87240601	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.125
6	87240610	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87240643	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.0967742
6	87240681	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.0625
6	87240682	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.212121
6	87241029	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.117647
6	87241190	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87241536	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.230769
6	87241537	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.230769
6	87247040	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.2
6	87247052	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.166667
6	87248505	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.4
6	87249310	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.166667
6	87249875	A->G	+	ENSG00000188994	ZNF292	protein_coding	Intergenic	.	.	Alu	0.1
6	87536380	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.25
6	87541207	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.25
6	87541255	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.230769
6	87541315	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.25
6	87541341	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.181818
6	87554577	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.7
6	87554681	A->G	-	ENSG00000146282	RARS2	protein_coding	Intergenic	.	.	Alu	0.3
6	89330622	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.5
6	89330624	A->G	-	ENSG00000198833	UBE2J1	protein_coding	Intergenic	.	.	Alu	0.181818
6	90283773	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.214286
6	90283884	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.2
6	90283980	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.3125
6	90283985	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.117647
6	99404871	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.142857
6	99404876	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.15
6	99404889	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.333333
6	99404907	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.111111
6	99405029	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.166667
6	99405248	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.181818
6	99405299	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.47619
6	99405302	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.136364
6	99405343	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.451613
6	99405355	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.5
6	99405390	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.111111
6	99405428	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.269231
6	99405729	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.0666667
6	99405769	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.047619
6	99405773	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.075
6	99405775	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.175
6	99405808	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.0666667
6	99417740	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.0571429
6	99417841	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.222222
6	99417860	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.15
6	99418253	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.2
6	99418311	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.157895
6	99418336	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.166667
6	99418360	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.133333
6	99418378	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.357143
6	99418411	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.125
6	99418892	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.0645161
6	99418898	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.310345
6	99418927	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.0606061
6	99418961	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.0869565
6	99419557	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.2
6	99421708	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.0833333
6	99421994	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.111111
6	99422046	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.0666667
6	99422762	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.176471
6	99422791	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.133333
6	99423786	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.130435
6	99556681	A->G	-	ENSG00000112237	CCNC	protein_coding	Intergenic	.	.	Alu	0.142857
7	10937476	A->G	-	ENSG00000189043	NDUFA4	protein_coding	Intergenic	.	.	Alu	0.166667
7	10937539	A->G	-	ENSG00000189043	NDUFA4	protein_coding	Intergenic	.	.	Alu	0.142857
7	23187868	A->G	+	ENSG00000136243	NUPL2	protein_coding	Intergenic	.	.	Alu	0.0833333
7	23509904	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.153846
7	23510398	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.2
7	23510504	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.166667
7	23512259	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0952381
7	23512360	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.4
7	23518077	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.285714
7	23518103	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.133333
7	23518158	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.259259
7	23518914	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.166667
7	24957996	A->G	-	ENSG00000070882	OSBPL3	protein_coding	Intergenic	.	.	Alu	0.538462
7	25124901	A->G	-	ENSG00000172115	CYCS	protein_coding	Intergenic	.	.	Alu	0.642857
7	26182886	A->G	-	ENSG00000050344	NFE2L3	protein_coding	Intergenic	.	.	Alu	0.181818
7	27796709	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.153846
7	27796719	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.166667
7	27796767	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.133333
7	27796782	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.153846
7	27797067	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.454545
7	27806186	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.181818
7	29939351	A->G	-	ENSG00000136193	SCRN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	29939353	A->G	-	ENSG00000136193	SCRN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	30141786	A->G	+	ENSG00000180354	MTURN	protein_coding	Intergenic	.	.	Alu	0.2
7	30622845	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.266667
7	30624974	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.461538
7	30624982	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.5
7	30625153	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.1
7	30625187	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.290323
7	30625205	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.107143
7	30625206	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.517241
7	30626467	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.307692
7	30626511	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.2
7	30626512	A->G	+	ENSG00000106105	GARS	protein_coding	Intergenic	.	.	Alu	0.636364
7	32505432	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.153846
7	32505438	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.214286
7	32505451	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.5
7	32505498	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.5625
7	32505511	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.166667
7	32518099	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.2
7	32875406	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.125
7	32875470	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.210526
7	32875474	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.130435
7	32875567	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.115385
7	32876773	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.181818
7	32876793	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.2
7	32876845	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.375
7	32877207	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32877990	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	32878049	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.166667
7	32885075	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.25
7	32885149	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.181818
7	33053326	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.166667
7	33056923	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.181818
7	33057435	A->G	-	ENSG00000122643	NT5C3A	protein_coding	Intergenic	.	.	Alu	0.230769
7	35690726	A->G	-	ENSG00000122557	HERPUD2	protein_coding	Intergenic	.	.	Alu	0.142857
7	35693915	A->G	-	ENSG00000122557	HERPUD2	protein_coding	Intergenic	.	.	Alu	0.117647
7	35851713	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.5625
7	35887381	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
7	35887411	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.176471
7	35887447	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.214286
7	35887568	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
7	37169468	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.176471
7	37169470	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.176471
7	37170820	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.0833333
7	37175595	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.2
7	37191120	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.5
7	37199357	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.375
7	37199384	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.153846
7	37199403	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.166667
7	37200763	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.6
7	37200774	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.333333
7	37200794	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.153846
7	37200843	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.2
7	37200845	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.25
7	37200921	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.142857
7	37200929	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.416667
7	37309153	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.272727
7	37432059	A->G	-	ENSG00000155849	ELMO1	protein_coding	Intergenic	.	.	Alu	0.2
7	39632719	A->G	+	ENSG00000006451	RALA	protein_coding	Intergenic	.	.	Alu	0.105263
7	39632726	A->G	+	ENSG00000006451	RALA	protein_coding	Intergenic	.	.	Alu	0.111111
7	39635117	A->G	+	ENSG00000006451	RALA	protein_coding	Intergenic	.	.	Alu	0.0869565
7	39638155	A->G	+	ENSG00000006451	RALA	protein_coding	Intergenic	.	.	Alu	0.2
7	39961342	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.153846
7	39971262	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.2
7	39975152	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.2
7	39991851	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.153846
7	39991931	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.545455
7	40066003	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.153846
7	40066093	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.363636
7	40066096	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.3
7	40066136	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.4
7	43596761	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.117647
7	43597419	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.1
7	43597450	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.117647
7	43597482	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.26087
7	43597507	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.142857
7	43597515	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.125
7	43597701	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.2
7	43597864	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.166667
7	43597879	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.1875
7	43615275	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.133333
7	43615276	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.142857
7	43615366	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.15
7	43615405	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.0740741
7	43615451	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.0833333
7	43621547	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.166667
7	44007982	A->G	-	ENSG00000214783	POLR2J4	processed_transcript	Intergenic	.	.	Alu	0.2
7	44008011	A->G	-	ENSG00000214783	POLR2J4	processed_transcript	Intergenic	.	.	Alu	0.181818
7	44008032	A->G	-	ENSG00000214783	POLR2J4	processed_transcript	Intergenic	.	.	Alu	0.2
7	44577260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
7	44577273	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
7	44577284	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	44577286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
7	44625152	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.8
7	44625204	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.166667
7	44625225	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.142857
7	44831091	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0416667
7	44831133	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0338983
7	44836718	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.3
7	44837174	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.128205
7	44837175	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0789474
7	44837191	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0769231
7	44837311	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0952381
7	44837552	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.15
7	44837629	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.111111
7	44837642	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.166667
7	44838453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.09375
7	44838459	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.121212
7	44838468	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.290323
7	44838531	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.117647
7	44838647	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.375
7	44839332	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.135135
7	44839351	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44840143	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.103448
7	44840181	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0740741
7	44840353	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.25
7	44840354	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0952381
7	44840359	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.571429
7	44840360	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44840536	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0909091
7	44840545	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44840554	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0909091
7	44840649	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.44
7	44840688	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.08
7	44840731	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.115385
7	44840763	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0833333
7	44840765	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.08
7	44841683	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44841758	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44842995	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.272727
7	45031512	A->G	+	ENSG00000136280	CCM2	protein_coding	Intergenic	.	.	Alu	0.142857
7	45031651	A->G	+	ENSG00000136280	CCM2	protein_coding	Intergenic	.	.	Alu	0.2
7	45740131	A->G	-	ENSG00000214765	SEPT7P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
7	45740132	A->G	-	ENSG00000214765	SEPT7P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	45740136	A->G	-	ENSG00000214765	SEPT7P2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
7	55392015	A->G	+	ENSG00000132434	LANCL2	protein_coding	Intergenic	.	.	Alu	0.277778
7	55392073	A->G	+	ENSG00000132434	LANCL2	protein_coding	Intergenic	.	.	Alu	0.5
7	55392490	A->G	+	ENSG00000132434	LANCL2	protein_coding	Intergenic	.	.	Alu	0.3
7	55455968	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.25
7	55457305	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.176471
7	55458612	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.263158
7	55459335	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.107143
7	55466765	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.3125
7	55466772	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.25
7	55542754	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.363636
7	55988142	A->G	+	ENSG00000146729	NIPSNAP2	protein_coding	Intergenic	.	.	Alu	0.153846
7	55998237	A->G	+	ENSG00000146729	NIPSNAP2	protein_coding	Intergenic	.	.	Alu	0.153846
7	56052920	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.133333
7	56052927	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.176471
7	56052983	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.181818
7	56053474	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.5
7	56053677	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.538462
7	56053707	A->G	+	ENSG00000146731	CCT6A	protein_coding	Intergenic	.	.	Alu	0.117647
7	56069418	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.181818
7	56069422	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.272727
7	56071236	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.181818
7	56075050	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.166667
7	56075055	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.333333
7	56075086	A->G	+	ENSG00000129103	SUMF2	protein_coding	Intergenic	.	.	Alu	0.166667
7	56105573	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.181818
7	56105729	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.133333
7	56105734	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.230769
7	64344041	A->G	+	ENSG00000234444	ZNF736	protein_coding	Intergenic	.	.	Alu	0.230769
7	64797964	A->G	+	ENSG00000197008	ZNF138	protein_coding	Intergenic	.	.	Alu	0.416667
7	64798007	A->G	+	ENSG00000197008	ZNF138	protein_coding	Intergenic	.	.	Alu	0.1875
7	64798041	A->G	+	ENSG00000197008	ZNF138	protein_coding	Intergenic	.	.	Alu	0.142857
7	64798051	A->G	+	ENSG00000197008	ZNF138	protein_coding	Intergenic	.	.	Alu	0.222222
7	64798080	A->G	+	ENSG00000197008	ZNF138	protein_coding	Intergenic	.	.	Alu	0.166667
7	65000553	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.272727
7	65000596	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.2
7	65000690	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.333333
7	65000749	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.466667
7	65000779	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.363636
7	65002378	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.142857
7	65002391	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.105263
7	65002409	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.142857
7	65002531	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.272727
7	65002532	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.272727
7	65003232	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.0952381
7	65003244	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.0952381
7	65003294	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.5
7	65003338	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.111111
7	65003347	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.117647
7	65003354	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.222222
7	65976808	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.2
7	65977333	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.142857
7	65978361	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.4
7	65978522	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.333333
7	65978524	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.166667
7	65978929	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.181818
7	65978933	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.272727
7	66116059	A->G	+	ENSG00000249319	AC068533.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66116060	A->G	+	ENSG00000249319	AC068533.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66154691	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.181818
7	66154697	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.363636
7	66155320	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.333333
7	66155342	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.166667
7	66155811	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.6
7	66157520	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.5
7	66587544	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	66590623	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	66590645	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	66683925	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66742790	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.157895
7	66742868	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66743455	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66745606	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3
7	66746710	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66749549	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66752309	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66754189	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66785625	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66785722	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.2
7	66785815	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.470588
7	66785819	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.176471
7	66787106	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.235294
7	66787156	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.25
7	66787166	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.454545
7	66787244	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66787248	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.285714
7	66787528	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66787550	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66787573	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.263158
7	67020178	A->G	+	ENSG00000198874	TYW1	protein_coding	Intergenic	.	.	Alu	0.181818
7	67020179	A->G	+	ENSG00000198874	TYW1	protein_coding	Intergenic	.	.	Alu	0.166667
7	67020263	A->G	+	ENSG00000198874	TYW1	protein_coding	Intergenic	.	.	Alu	0.181818
7	67020272	A->G	+	ENSG00000198874	TYW1	protein_coding	Intergenic	.	.	Alu	0.333333
7	67304721	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	67312604	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
7	67317505	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	72834887	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	72834888	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	72834925	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0909091
7	72834926	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.227273
7	72834969	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
7	72834995	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
7	72834996	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	72835963	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	72836141	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	72836142	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	72995722	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	73462017	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.153846
7	73462040	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.272727
7	73475468	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.214286
7	73487346	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.181818
7	73516999	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.2
7	73517282	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.272727
7	73517499	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.2
7	73539058	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.416667
7	73539097	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.181818
7	73539389	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.2
7	74177980	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.117647
7	74178015	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.631579
7	74178020	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.15
7	74178041	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.176471
7	74178058	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.181818
7	74178155	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.1875
7	74181013	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0769231
7	74182426	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0714286
7	74186379	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.0952381
7	74186380	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.173913
7	74187168	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.125
7	74218704	A->G	+	ENSG00000086730	LAT2	protein_coding	Intergenic	.	.	Alu	0.3
7	74248070	A->G	-	ENSG00000049541	RFC2	protein_coding	Intergenic	.	.	Alu	0.2
7	74691880	A->G	+	ENSG00000263001	GTF2I	protein_coding	Intergenic	.	.	Alu	0.153846
7	74693583	A->G	+	ENSG00000263001	GTF2I	protein_coding	Intergenic	.	.	Alu	0.4
7	74879267	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	74879913	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
7	74880328	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
7	74880480	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
7	74880907	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
7	74880940	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
7	74880945	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
7	74880969	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	75026065	A->G	+	.	.	.	Intergenic	.	.	Alu	1
7	75029578	A->G	+	ENSG00000274523	RCC1L	protein_coding	Intergenic	.	.	Alu	0.2
7	75029605	A->G	+	ENSG00000274523	RCC1L	protein_coding	Intergenic	.	.	Alu	0.1
7	75029976	A->G	+	ENSG00000274523	RCC1L	protein_coding	Intergenic	.	.	Alu	0.2
7	75106071	A->G	+	ENSG00000174428	GTF2IRD2B	protein_coding	Intergenic	.	.	Alu	0.5
7	75882392	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.111111
7	75882449	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.269231
7	75882459	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.25
7	75882505	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	75882534	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.2
7	75882568	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.16129
7	75882586	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.0666667
7	75882587	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.0666667
7	75883318	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.142857
7	75883328	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.583333
7	75883404	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.5
7	75884321	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.117647
7	75884483	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.294118
7	75917099	A->G	+	ENSG00000127948	POR	protein_coding	Intergenic	.	.	Alu	0.181818
7	76334840	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.133333
7	76340910	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.25
7	76344275	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.2
7	76345772	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.5
7	76345813	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.25
7	76345823	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.454545
7	76345894	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.333333
7	76345927	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.214286
7	76347346	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.166667
7	76347510	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.153846
7	76350825	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.133333
7	76353979	A->G	-	ENSG00000170027	YWHAG	protein_coding	Intergenic	.	.	Alu	0.117647
7	77557232	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.2
7	77557241	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.333333
7	77557244	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.2
7	77561102	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.3
7	77566466	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.2
7	77566467	A->G	+	ENSG00000127947	PTPN12	protein_coding	Intergenic	.	.	Alu	0.2
7	77701031	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.2
7	77701035	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.3
7	77703859	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.142857
7	77737928	A->G	+	ENSG00000187257	RSBN1L	protein_coding	Intergenic	.	.	Alu	0.117647
7	77927425	A->G	+	ENSG00000006576	PHTF2	protein_coding	Intergenic	.	.	Alu	0.181818
7	77943260	A->G	+	ENSG00000006576	PHTF2	protein_coding	Intergenic	.	.	Alu	0.818182
7	77943309	A->G	+	ENSG00000006576	PHTF2	protein_coding	Intergenic	.	.	Alu	0.5
7	77943989	A->G	+	ENSG00000006576	PHTF2	protein_coding	Intergenic	.	.	Alu	0.3
7	77945287	A->G	+	ENSG00000006576	PHTF2	protein_coding	Intergenic	.	.	Alu	0.125
7	87888673	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.166667
7	87888674	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.166667
7	87888708	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.166667
7	87888721	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.15
7	87898030	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.190476
7	87898039	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.125
7	87898040	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.125
7	87898537	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.214286
7	87898567	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.2
7	90626662	A->G	+	ENSG00000058091	CDK14	protein_coding	Intergenic	.	.	Alu	0.2
7	91946529	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.2
7	92768081	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.176471
7	92768093	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.25
7	92768105	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.222222
7	92811969	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.2
7	92811988	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.24
7	92812698	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.243243
7	92812699	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.135135
7	92812717	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.1
7	92812721	A->G	-	ENSG00000105810	CDK6	protein_coding	Intergenic	.	.	Alu	0.107143
7	94519742	A->G	+	ENSG00000127995	CASD1	protein_coding	Intergenic	.	.	Alu	0.142857
7	94519787	A->G	+	ENSG00000127995	CASD1	protein_coding	Intergenic	.	.	Alu	0.285714
7	96709014	A->G	-	ENSG00000127922	SEM1	protein_coding	Intergenic	.	.	Alu	0.08
7	97968671	A->G	-	ENSG00000284707	AC079781.5	processed_transcript	Intergenic	.	.	Alu	0.25
7	97968678	A->G	-	ENSG00000284707	AC079781.5	processed_transcript	Intergenic	.	.	Alu	0.25
7	97969311	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	98187657	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.3
7	98187685	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.3
7	98187831	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.142857
7	98187832	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.142857
7	98187859	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.153846
7	98187862	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.166667
7	98188536	A->G	+	ENSG00000164715	LMTK2	protein_coding	Intergenic	.	.	Alu	0.2
7	99037833	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.545455
7	99039009	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.25
7	99039012	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.384615
7	99039026	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.571429
7	99039029	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.133333
7	99040163	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.538462
7	99125211	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.166667
7	99125235	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.176471
7	99125239	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.176471
7	99129555	A->G	-	ENSG00000198742	SMURF1	protein_coding	Intergenic	.	.	Alu	0.117647
7	99328786	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.181818
7	99328814	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.25
7	99334242	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.272727
7	99335190	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.2
7	99336931	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.2
7	99336936	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.125
7	99337257	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.153846
7	99339481	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.214286
7	99339483	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.357143
7	99342351	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.363636
7	99342352	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.416667
7	99342520	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.181818
7	99364524	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.2
7	99365534	A->G	+	ENSG00000284292	AC004922.1	protein_coding	Intergenic	.	.	Alu	0.2
7	99377081	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.2
7	99378159	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.357143
7	99378160	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.142857
7	99488302	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.153846
7	99490408	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.142857
7	99496253	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0512821
7	99496335	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0714286
7	99496634	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0566038
7	99496687	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.102041
7	99497375	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.08
7	99497377	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.08
7	99497430	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.285714
7	99497453	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.5
7	99497619	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0769231
7	99497629	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.454545
7	99497681	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.857143
7	99497701	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.210526
7	99497751	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0697674
7	99497810	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.725
7	99497848	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.285714
7	99560272	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.117647
7	99565376	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.142857
7	99566606	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.272727
7	99566690	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.2
7	99566790	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.1
7	99566807	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.315789
7	99569046	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.0769231
7	99569047	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.0740741
7	99569059	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.0625
8	10805443	A->G	-	ENSG00000254093	PINX1	protein_coding	Intergenic	.	.	Alu	0.363636
8	11822623	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.142857
8	11822742	A->G	+	ENSG00000079459	FDFT1	protein_coding	Intergenic	.	.	Alu	0.153846
8	12532912	A->G	-	ENSG00000283674	AC068587.4	processed_transcript	Intergenic	.	.	Alu	0.6
8	17174962	A->G	+	ENSG00000104219	ZDHHC2	protein_coding	Intergenic	.	.	Alu	0.2
8	17240454	A->G	-	ENSG00000198791	CNOT7	protein_coding	Intergenic	.	.	Alu	0.230769
8	17240891	A->G	-	ENSG00000198791	CNOT7	protein_coding	Intergenic	.	.	Alu	0.428571
8	17240920	A->G	-	ENSG00000198791	CNOT7	protein_coding	Intergenic	.	.	Alu	0.1875
8	17973509	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.230769
8	17973523	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.181818
8	17973535	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.466667
8	17973560	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.142857
8	17973569	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.133333
8	17975293	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.153846
8	17975329	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.117647
8	17975377	A->G	+	ENSG00000078674	PCM1	protein_coding	Intergenic	.	.	Alu	0.47619
8	19826291	A->G	+	ENSG00000104613	INTS10	protein_coding	Intergenic	.	.	Alu	0.416667
8	19826320	A->G	+	ENSG00000104613	INTS10	protein_coding	Intergenic	.	.	Alu	0.181818
8	21977458	A->G	+	ENSG00000130227	XPO7	protein_coding	Intergenic	.	.	Alu	0.3
8	21977459	A->G	+	ENSG00000130227	XPO7	protein_coding	Intergenic	.	.	Alu	0.4
8	22452559	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.125
8	22457402	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.181818
8	22457403	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.166667
8	22457420	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.166667
8	22460427	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.153846
8	22461011	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.2
8	22461012	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.2
8	22461032	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.333333
8	22461033	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.166667
8	22461048	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.692308
8	22486859	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.4
8	22487600	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.2
8	22501811	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.153846
8	22502431	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.176471
8	22502903	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.230769
8	22502972	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.2
8	22507063	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.142857
8	22534047	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.142857
8	22534078	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.153846
8	22534079	A->G	+	ENSG00000120910	PPP3CC	protein_coding	Intergenic	.	.	Alu	0.153846
8	22609090	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.384615
8	22609115	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.25
8	22609180	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.222222
8	22609203	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.111111
8	22609387	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.0454545
8	22609391	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.0909091
8	22609399	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.05
8	22609426	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.0638298
8	22609895	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.147059
8	22612394	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.0833333
8	22631380	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.4
8	22633207	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.214286
8	22633222	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.142857
8	22633226	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.214286
8	22633252	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.125
8	22633298	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.384615
8	22663350	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.166667
8	23041410	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.25
8	23041413	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.181818
8	23062449	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.25
8	23187434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
8	23187531	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
8	23187608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
8	23188285	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
8	23188321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
8	23188325	A->G	-	.	.	.	Intergenic	.	.	Alu	0.129032
8	23188340	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
8	23188354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.216216
8	23188385	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0857143
8	23188392	A->G	-	.	.	.	Intergenic	.	.	Alu	0.314286
8	23188396	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
8	23188397	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
8	23188444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.37037
8	23188500	A->G	-	.	.	.	Intergenic	.	.	Alu	0.347826
8	23188508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.55
8	23188512	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
8	23188571	A->G	-	.	.	.	Intergenic	.	.	Alu	0.714286
8	23188579	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
8	23188610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
8	23188638	A->G	-	.	.	.	Intergenic	.	.	Alu	0.85
8	23188641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
8	23188804	A->G	-	.	.	.	Intergenic	.	.	Alu	0.263158
8	23188805	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
8	23188806	A->G	-	.	.	.	Intergenic	.	.	Alu	0.578947
8	23188810	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
8	23188960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.580645
8	23188997	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0810811
8	23189019	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
8	23189046	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
8	23189062	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	23189272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
8	24301402	A->G	+	ENSG00000042980	ADAM28	protein_coding	Intergenic	.	.	Alu	0.214286
8	25452973	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.105263
8	25452982	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.166667
8	25453469	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.125
8	25453482	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.142857
8	25454114	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.181818
8	25454168	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.1875
8	25454175	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.117647
8	25454975	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intergenic	.	.	Alu	0.3
8	26297227	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	26299200	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.08
8	26300771	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.142857
8	26300772	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.333333
8	26301432	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.5
8	26301433	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.3
8	26308986	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	26309104	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.125
8	26309123	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	26311541	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.0869565
8	26311578	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.08
8	26313065	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.117647
8	26313309	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.230769
8	26325215	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.68
8	26350164	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.117647
8	26386479	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.136364
8	26386568	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.0909091
8	26388957	A->G	+	ENSG00000104765	BNIP3L	protein_coding	Intergenic	.	.	Alu	0.0526316
8	27337401	A->G	+	ENSG00000120899	PTK2B	protein_coding	Intergenic	.	.	Alu	0.2
8	28371460	A->G	-	ENSG00000186918	ZNF395	protein_coding	Intergenic	.	.	Alu	0.333333
8	29227454	A->G	-	ENSG00000197892	KIF13B	protein_coding	Intergenic	.	.	Alu	0.333333
8	29239036	A->G	-	ENSG00000197892	KIF13B	protein_coding	Intergenic	.	.	Alu	0.166667
8	29244285	A->G	-	ENSG00000197892	KIF13B	protein_coding	Intergenic	.	.	Alu	0.166667
8	30061585	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
8	30081530	A->G	-	ENSG00000133872	SARAF	protein_coding	Intergenic	.	.	Alu	1
8	30113208	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	30113220	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.333333
8	30114344	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.3
8	30169909	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.222222
8	30169964	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.142857
8	30170878	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.4
8	30170897	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.181818
8	30172577	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.3
8	30172658	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.4
8	30172688	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.2
8	30178200	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.0909091
8	30178663	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.2
8	30178729	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.181818
8	30178820	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.181818
8	30178865	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.25
8	30178933	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.1
8	30179816	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.5
8	30182748	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.2
8	30182844	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.2
8	30644819	A->G	-	ENSG00000253457	SMIM18	protein_coding	Intergenic	.	.	Alu	0.166667
8	30803286	A->G	-	ENSG00000104695	PPP2CB	protein_coding	Intergenic	.	.	Alu	0.153846
8	30808237	A->G	-	ENSG00000104695	PPP2CB	protein_coding	Intergenic	.	.	Alu	0.25
8	30808263	A->G	-	ENSG00000104695	PPP2CB	protein_coding	Intergenic	.	.	Alu	0.166667
8	31060480	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.181818
8	31063023	A->G	+	ENSG00000165392	WRN	protein_coding	Intergenic	.	.	Alu	0.2
8	37764383	A->G	+	ENSG00000147471	PLPBP	protein_coding	Intergenic	.	.	Alu	0.181818
8	37764408	A->G	+	ENSG00000147471	PLPBP	protein_coding	Intergenic	.	.	Alu	0.272727
8	37764447	A->G	+	ENSG00000147471	PLPBP	protein_coding	Intergenic	.	.	Alu	0.4
8	37880213	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	37880223	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	37881773	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.125
8	37887484	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.166667
8	37889869	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.2
8	37893602	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.105263
8	37893666	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	37893764	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.133333
8	37893774	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.266667
8	37893782	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.133333
8	38109711	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.176471
8	38167832	A->G	-	ENSG00000175324	LSM1	protein_coding	Intergenic	.	.	Alu	0.3
8	38204256	A->G	+	ENSG00000156735	BAG4	protein_coding	Intergenic	.	.	Alu	0.2
8	38213807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
8	38213818	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
8	38213833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
8	38214529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38214815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
8	38216253	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
8	38216255	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
8	38216309	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
8	38216384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
8	38216463	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
8	38216464	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
8	38216729	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38217497	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
8	38217499	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
8	38217503	A->G	+	.	.	.	Intergenic	.	.	Alu	0.571429
8	38217554	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
8	38217555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.227273
8	38217572	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
8	38217579	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
8	38217588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
8	38217594	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
8	38218114	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	38218126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	38219270	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
8	38219291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
8	38219340	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38219501	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38219743	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
8	38219744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
8	38220324	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	38220401	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38220623	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
8	38220628	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
8	38221477	A->G	+	.	.	.	Intergenic	.	.	Alu	0.352941
8	38241439	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.117647
8	38241501	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.3
8	38241948	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.3
8	38246586	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.421053
8	38246601	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.105263
8	38246632	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.294118
8	38246671	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.142857
8	38246683	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.125
8	38246686	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38246695	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.133333
8	38246749	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.333333
8	38254870	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intergenic	.	.	Alu	0.2
8	38376493	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.416667
8	38377125	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.111111
8	38377149	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.25
8	38377181	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.166667
8	38377191	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.142857
8	38377217	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.181818
8	38377384	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.142857
8	38377421	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.1
8	38377422	A->G	-	ENSG00000147548	NSD3	protein_coding	Intergenic	.	.	Alu	0.25
8	38447585	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.153846
8	38447620	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.142857
8	38447756	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.125
8	38448340	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.642857
8	38448356	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.166667
8	38448362	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.166667
8	38448369	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.285714
8	38448382	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.133333
8	38448449	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.125
8	38448462	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.117647
8	38452420	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.4
8	38452433	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.722222
8	38452489	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.6875
8	38452503	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.25
8	38452511	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.733333
8	38452562	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.545455
8	38453737	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.2
8	38453816	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.153846
8	38453990	A->G	-	ENSG00000077782	FGFR1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	38814280	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.214286
8	38831608	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.125
8	38831696	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	38835066	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.25
8	38835087	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	38837458	A->G	+	ENSG00000147526	TACC1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	38905293	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.133333
8	38905315	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.4
8	38905337	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38905410	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.142857
8	38905415	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38905866	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38905869	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38905944	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.111111
8	38905946	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.111111
8	38907883	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38907936	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.277778
8	38907956	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38907958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.190476
8	38907985	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.210526
8	38911276	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.214286
8	38911337	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.357143
8	38911341	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.142857
8	38911403	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.153846
8	38911417	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.117647
8	38911418	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.235294
8	38911426	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.235294
8	38911498	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.117647
8	38911499	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.1875
8	38911767	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.3125
8	38911805	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.1
8	38911829	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.136364
8	38911855	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.0952381
8	38912229	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.142857
8	38912254	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.1
8	38912292	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.111111
8	38912293	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.111111
8	38913314	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.3
8	38938984	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38939004	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.153846
8	38939997	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.117647
8	38942220	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.4
8	39020030	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.111111
8	39020031	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.294118
8	39020036	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.529412
8	39020074	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.545455
8	39020077	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.545455
8	39020098	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.214286
8	39020134	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.272727
8	39020135	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.181818
8	39020138	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.666667
8	39020236	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.157895
8	39021302	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.607143
8	39021304	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.178571
8	39021339	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.15
8	39021436	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.272727
8	39021464	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.363636
8	41616361	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.2
8	41966293	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.241379
8	41966296	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.241379
8	41966403	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.583333
8	41966405	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.32
8	41966457	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.325581
8	41974140	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0769231
8	41974267	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.15
8	41974292	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.105263
8	42021845	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0869565
8	42041493	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0909091
8	42041532	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0909091
8	42041572	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.222222
8	42041662	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.190476
8	42045398	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.153846
8	42045792	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.153846
8	42047486	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0689655
8	42047511	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.210526
8	42047610	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.0689655
8	42047638	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.12
8	42047697	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.190476
8	42273644	A->G	+	ENSG00000104365	IKBKB	protein_coding	Intergenic	.	.	Alu	0.272727
8	42282242	A->G	+	ENSG00000104365	IKBKB	protein_coding	Intergenic	.	.	Alu	0.153846
8	42282253	A->G	+	ENSG00000104365	IKBKB	protein_coding	Intergenic	.	.	Alu	0.181818
8	42364260	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.166667
8	42364263	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.153846
8	42534217	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.4
8	42915571	A->G	+	ENSG00000168172	HOOK3	protein_coding	Intergenic	.	.	Alu	0.2
8	43061837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.214286
8	43064544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	43064554	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	43069878	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.2
8	43070096	A->G	+	ENSG00000254673	AC110275.1	protein_coding	Intergenic	.	.	Alu	0.153846
8	43124600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0810811
8	43130031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.118644
8	43177372	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.3
8	47946209	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.230769
8	47946231	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.333333
8	47946238	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.333333
8	47946244	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.133333
8	47946248	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.142857
8	47946249	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.333333
8	47946274	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.25
8	47947510	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.222222
8	47947524	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.105263
8	47947585	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.222222
8	47947588	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.133333
8	47947602	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.230769
8	47947682	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.125
8	47947745	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.230769
8	47947786	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.25
8	47947851	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.117647
8	47947886	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.2
8	47947999	A->G	-	ENSG00000253729	PRKDC	protein_coding	Intergenic	.	.	Alu	0.2
8	51854622	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.111111
8	51854649	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.214286
8	51854684	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.529412
8	51854697	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.2
8	51854769	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	51854794	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.136364
8	51854801	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.105263
8	51854930	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.15
8	51854992	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.230769
8	51855003	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.454545
8	51855316	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.285714
8	51855798	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.454545
8	51855858	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.238095
8	51855863	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.105263
8	51855871	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.166667
8	51855873	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.291667
8	51855897	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.222222
8	51855902	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.166667
8	51875823	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.272727
8	51880497	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.25
8	51880516	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.166667
8	51883402	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.136364
8	51883405	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.227273
8	51891437	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	52672254	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52672255	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.181818
8	52681268	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	52689880	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	52689927	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	52696740	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0652174
8	52696746	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0425532
8	52696752	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.170732
8	52696811	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	52696815	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.172414
8	52696967	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.193548
8	52698251	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0363636
8	52698958	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	52699675	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.142857
8	52700302	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.166667
8	52700307	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.307692
8	52700452	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
8	52700453	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.105263
8	52700459	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.631579
8	52700467	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.111111
8	52700473	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
8	52700527	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
8	52700532	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	52701293	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0416667
8	52701813	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.1
8	52702499	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.35
8	52702550	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.416667
8	52702616	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
8	52702672	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
8	52702682	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.230769
8	52702701	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.142857
8	52706908	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0606061
8	52708903	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.307692
8	52708910	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.785714
8	52708991	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.6
8	52709085	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0869565
8	52709144	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	52709168	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	52709206	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0645161
8	52709654	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.180328
8	52709656	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.142857
8	52709739	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.0408163
8	52710051	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.5
8	52710077	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.785714
8	52710080	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.25
8	53984017	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.111111
8	53984056	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.2
8	53989908	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.357143
8	53991444	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.117647
8	53992129	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.153846
8	53992190	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.2
8	54061218	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.181818
8	54061682	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.133333
8	54061720	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.307692
8	54061725	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.357143
8	54079600	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.272727
8	54080351	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.363636
8	54080355	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.181818
8	54099593	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.25
8	55775008	A->G	+	ENSG00000137574	TGS1	protein_coding	Intergenic	.	.	Alu	0.181818
8	55778204	A->G	+	ENSG00000137574	TGS1	protein_coding	Intergenic	.	.	Alu	0.181818
8	55778212	A->G	+	ENSG00000137574	TGS1	protein_coding	Intergenic	.	.	Alu	0.166667
8	55888762	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0666667
8	55889049	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0967742
8	55889111	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55889204	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0869565
8	55889217	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55889431	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55889432	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55889995	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.106383
8	55890805	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55890827	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55890869	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55892238	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55892341	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0588235
8	55892562	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55894487	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.114286
8	55894504	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0606061
8	55895023	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.0689655
8	55895526	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.136364
8	55895528	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.26087
8	55895534	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intergenic	.	.	Alu	0.136364
8	55897001	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55897650	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.108108
8	55897656	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0882353
8	55897687	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15
8	55897705	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0952381
8	55897721	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.7
8	55897730	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.55
8	55897741	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55897766	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55897771	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55897792	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.193548
8	55897802	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.242424
8	55897806	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.4
8	55897815	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0689655
8	55897833	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.103448
8	55897854	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15625
8	55897873	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0645161
8	55898314	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55898350	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.263158
8	55898369	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.15
8	55898389	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55898480	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55898498	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55899875	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0666667
8	55899880	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0689655
8	55899909	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0769231
8	55903051	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.277778
8	55903099	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0689655
8	55903745	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.136364
8	55903752	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.363636
8	55903770	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.08
8	55903785	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.269231
8	55903832	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.228571
8	55903843	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0588235
8	55903869	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.206897
8	55903873	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.09375
8	55903895	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0645161
8	55905235	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55905326	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1
8	55906273	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.05
8	55906274	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.05
8	55906320	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0606061
8	55906370	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55906440	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0408163
8	55906483	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0454545
8	55906496	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0416667
8	55907685	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.307692
8	55907702	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55907848	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55908325	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.384615
8	55908338	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.285714
8	55908473	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55908507	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55908809	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.06
8	55916915	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.642857
8	55916922	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.428571
8	55917327	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.111111
8	55922121	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.714286
8	55922152	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	55922157	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0740741
8	55922165	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.190476
8	55922181	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.133333
8	55922191	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.277778
8	55922192	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55922227	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55922304	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.357143
8	55922312	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55922342	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.705882
8	55922352	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.222222
8	55922364	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55922366	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0909091
8	55924941	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55924942	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.115385
8	55925226	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0714286
8	55927768	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.1875
8	55927775	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.294118
8	55928165	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.153846
8	55928209	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55932521	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55955649	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.0882353
8	55955738	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55955747	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.130435
8	55959734	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.235294
8	55959959	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55959961	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55964266	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.3125
8	55964278	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.157895
8	55964341	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.176471
8	55965861	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55965869	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.105263
8	55965982	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
8	55965998	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.214286
8	55966005	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.125
8	55966074	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55966075	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.142857
8	55966573	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.7
8	55966611	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.4
8	55966630	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.235294
8	55977799	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55977848	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.117647
8	55985918	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.181818
8	55987583	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.166667
8	56977765	A->G	-	ENSG00000104331	IMPAD1	protein_coding	Intergenic	.	.	Alu	0.363636
8	58657906	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.454545
8	58657921	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.5
8	60526653	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.290323
8	60527226	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	60531988	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
8	60531994	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
8	60532623	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.307692
8	60532653	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
8	60532730	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.2
8	60532745	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0909091
8	60533761	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.285714
8	60533764	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.190476
8	60533769	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.444444
8	60533770	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.210526
8	60533806	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.103448
8	60533850	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.230769
8	60533855	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.222222
8	60533876	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.4375
8	60533951	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.0857143
8	60534316	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.103448
8	60534351	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.16
8	60537784	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.1
8	60541475	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.181818
8	60541479	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.133333
8	60541524	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.117647
8	60541529	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.117647
8	60544171	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	60544223	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.125
8	60544229	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.461538
8	60557258	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.6
8	60557665	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.263158
8	60557692	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.214286
8	60557695	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.357143
8	60565161	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.125
8	60565164	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.125
8	60565236	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.466667
8	60565241	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	60565308	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	60565315	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.230769
8	60565373	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.333333
8	60585382	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.230769
8	60585497	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.153846
8	60588202	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.166667
8	63195831	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.25
8	67244049	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.2
8	67244434	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.181818
8	67269388	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.2
8	67322512	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.125
8	67322585	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.111111
8	67322674	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.15
8	67322691	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.285714
8	67322704	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
8	67323831	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.2
8	67324279	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.666667
8	67326028	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.181818
8	67326077	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.2
8	67326104	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.235294
8	67326146	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.25
8	67326151	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.125
8	67326154	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.125
8	67326167	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.25
8	67334073	A->G	-	ENSG00000066777	ARFGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
8	70122310	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.25
8	70267495	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.133333
8	70267509	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.153846
8	70269456	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.153846
8	70288494	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.181818
8	70389807	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.272727
8	70576632	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.25
8	70578303	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.185185
8	70578307	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.518519
8	70578312	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.136364
8	70578327	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.142857
8	70578328	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.1
8	70578438	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.25
8	70578447	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.307692
8	70578455	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.235294
8	70578508	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.181818
8	70578586	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.133333
8	70587279	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.181818
8	70588000	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.2
8	70591245	A->G	-	ENSG00000067167	TRAM1	protein_coding	Intergenic	.	.	Alu	0.142857
8	73859688	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.3
8	73859700	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.272727
8	73873561	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.4
8	73873625	A->G	-	ENSG00000258677	AC022826.2	protein_coding	Intergenic	.	.	Alu	0.363636
8	73966576	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.0952381
8	73966608	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.105263
8	73970195	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.0869565
8	73970201	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.15
8	73970234	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.111111
8	81026248	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.133333
8	81026265	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.142857
8	81026286	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.153846
8	81026317	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.375
8	81026346	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.357143
8	81027149	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.181818
8	81027244	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.230769
8	81027269	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.294118
8	81027276	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.142857
8	81027277	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.461538
8	81027297	A->G	-	ENSG00000076641	PAG1	protein_coding	Intergenic	.	.	Alu	0.3
8	81676763	A->G	-	ENSG00000133731	IMPA1	protein_coding	Intergenic	.	.	Alu	0.3
8	81676871	A->G	-	ENSG00000133731	IMPA1	protein_coding	Intergenic	.	.	Alu	0.333333
8	81676912	A->G	-	ENSG00000133731	IMPA1	protein_coding	Intergenic	.	.	Alu	0.230769
8	94532180	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.2
8	94542943	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.3125
8	94542974	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.142857
8	94543014	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.142857
8	94543020	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.461538
8	94543024	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.181818
8	94549866	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.153846
8	94549878	A->G	-	ENSG00000164944	VIRMA	protein_coding	Intergenic	.	.	Alu	0.142857
8	94845357	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.571429
8	94852842	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.272727
8	94852860	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.454545
8	94852869	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.2
8	94852882	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.2
8	94853110	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.2
8	94853130	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.714286
8	94853162	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.142857
8	94853191	A->G	+	ENSG00000164941	INTS8	protein_coding	Intergenic	.	.	Alu	0.363636
8	94933572	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.333333
8	94939493	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.222222
8	94939520	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.235294
8	94939534	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.2
8	94939540	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.125
8	94942169	A->G	-	ENSG00000164938	TP53INP1	protein_coding	Intergenic	.	.	Alu	0.25
8	96310063	A->G	+	ENSG00000156471	PTDSS1	protein_coding	Intergenic	.	.	Alu	0.2
8	96310074	A->G	+	ENSG00000156471	PTDSS1	protein_coding	Intergenic	.	.	Alu	0.3
8	96317685	A->G	+	ENSG00000156471	PTDSS1	protein_coding	Intergenic	.	.	Alu	0.181818
8	97647380	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.166667
8	97647893	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.136364
8	97647899	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.173913
8	97647931	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.125
8	97647932	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.111111
8	97648525	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.357143
8	97648579	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.0769231
8	97648580	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.125
8	97648581	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.217391
8	97649637	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.0909091
8	97650416	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.142857
8	97654844	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.166667
8	97654845	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.25
8	97654858	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.2
8	97657527	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.125
8	97657552	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.263158
8	97657643	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.117647
8	97657661	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.117647
8	97657713	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.277778
8	97657783	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.125
8	97667108	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.153846
8	97683629	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.153846
8	97683646	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.166667
8	97692748	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.153846
8	97692967	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.1
8	97694297	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.142857
8	97694315	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.166667
8	97694327	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.333333
8	97694380	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.166667
8	97706808	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.357143
8	97706816	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.230769
8	97706822	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.416667
8	97706878	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.142857
8	97706897	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.294118
8	97707502	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.181818
8	97707551	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.210526
8	97707792	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.117647
8	97707842	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.114286
8	97709133	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.6
8	97709143	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.272727
8	97711269	A->G	+	ENSG00000147649	MTDH	protein_coding	Intergenic	.	.	Alu	0.25
8	97729680	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	15498268	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	15498316	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.5
9	15498334	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.2
9	15498369	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	15498382	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.380952
9	15498402	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	15498412	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.227273
9	15498413	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	15503474	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	15504012	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.125
9	15504017	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.75
9	15504018	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.4375
9	15504508	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	19098766	A->G	-	ENSG00000147874	HAUS6	protein_coding	Intergenic	.	.	Alu	0.166667
9	19098780	A->G	-	ENSG00000147874	HAUS6	protein_coding	Intergenic	.	.	Alu	0.181818
9	19099686	A->G	-	ENSG00000147874	HAUS6	protein_coding	Intergenic	.	.	Alu	0.5
9	19100005	A->G	-	ENSG00000147874	HAUS6	protein_coding	Intergenic	.	.	Alu	0.2
9	19100309	A->G	-	ENSG00000147874	HAUS6	protein_coding	Intergenic	.	.	Alu	0.181818
9	19100362	A->G	-	ENSG00000147874	HAUS6	protein_coding	Intergenic	.	.	Alu	0.181818
9	33035142	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.117647
9	33035225	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.185185
9	33035226	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	33035227	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	33035307	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.153846
9	33035650	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	33037615	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.1
9	33038104	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0540541
9	33074566	A->G	-	ENSG00000122692	SMU1	protein_coding	Intergenic	.	.	Alu	0.2
9	33308068	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.266667
9	33308079	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.235294
9	33308193	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.181818
9	33308251	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.571429
9	33308292	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.166667
9	33308295	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.25
9	33308321	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.2
9	33821828	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.153846
9	33821841	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.153846
9	33822699	A->G	+	ENSG00000107341	UBE2R2	protein_coding	Intergenic	.	.	Alu	0.4
9	34183827	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	34183883	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.307692
9	34183970	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.428571
9	34188529	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	34191317	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
9	34191335	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.428571
9	34191344	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.266667
9	34192105	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	34192106	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	34193029	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	34193087	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.352941
9	34193147	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	34193148	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34193150	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34194378	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.3
9	34194379	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
9	34194408	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	34201402	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intergenic	.	.	Alu	0.142857
9	34204085	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34204117	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34217306	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
9	34220285	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	34226378	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
9	34228843	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.125
9	34230909	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	34230922	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
9	34230923	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.2
9	34231020	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.285714
9	34231061	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.111111
9	34231084	A->G	+	ENSG00000165006	UBAP1	protein_coding	Intergenic	.	.	Alu	0.368421
9	34450046	A->G	-	ENSG00000164970	FAM219A	protein_coding	Intergenic	.	.	Alu	0.2
9	35048813	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	35050683	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
9	35052823	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
9	35055895	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
9	35055896	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
9	35694028	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
9	36197016	A->G	+	ENSG00000122705	CLTA	protein_coding	Intergenic	.	.	Alu	0.2
9	36346316	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.133333
9	36346394	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.235294
9	36346410	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.470588
9	36346441	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.142857
9	36346464	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.2
9	36346914	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.181818
9	36346952	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.5
9	36347960	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.142857
9	36347967	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.230769
9	36365568	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.2
9	36455668	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.3
9	36455685	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.181818
9	36457690	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.25
9	36457691	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.166667
9	37161397	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.416667
9	37161402	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.25
9	37164217	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.117647
9	37164786	A->G	+	ENSG00000147905	ZCCHC7	protein_coding	Intergenic	.	.	Alu	0.3
9	37590189	A->G	-	ENSG00000256966	AL513165.2	protein_coding	Intergenic	.	.	Alu	0.272727
9	37590190	A->G	-	ENSG00000256966	AL513165.2	protein_coding	Intergenic	.	.	Alu	0.545455
9	37590260	A->G	-	ENSG00000256966	AL513165.2	protein_coding	Intergenic	.	.	Alu	0.181818
9	37590279	A->G	-	ENSG00000256966	AL513165.2	protein_coding	Intergenic	.	.	Alu	0.142857
9	37886907	A->G	-	ENSG00000122696	SLC25A51	protein_coding	Intergenic	.	.	Alu	0.181818
9	62818376	A->G	-	.	.	.	Intergenic	.	.	Alu	0.916667
9	70302952	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0909091
9	70303021	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0909091
9	70303120	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.105263
9	70304101	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.153846
9	70304108	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.333333
9	70304120	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.125
9	70304214	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.25
9	70304218	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.2
9	70304220	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.176471
9	70304299	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.272727
9	70304314	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.416667
9	70304431	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.181818
9	70304459	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.1
9	70304467	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.478261
9	70304486	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0833333
9	70304491	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0740741
9	70304501	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.115385
9	70304506	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0833333
9	70304535	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.130435
9	70304540	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.166667
9	70304580	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0869565
9	70304632	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0869565
9	70304652	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.111111
9	70304669	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.111111
9	70304675	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0689655
9	70321634	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.333333
9	70321650	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.230769
9	71728924	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.363636
9	71729519	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.125
9	71737608	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.153846
9	71737636	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.1
9	71893968	A->G	-	ENSG00000107362	ABHD17B	protein_coding	Intergenic	.	.	Alu	0.3
9	71893990	A->G	-	ENSG00000107362	ABHD17B	protein_coding	Intergenic	.	.	Alu	0.181818
9	71906008	A->G	-	ENSG00000107362	ABHD17B	protein_coding	Intergenic	.	.	Alu	0.2
9	71906646	A->G	-	ENSG00000107362	ABHD17B	protein_coding	Intergenic	.	.	Alu	0.1
9	71908146	A->G	-	ENSG00000107362	ABHD17B	protein_coding	Intergenic	.	.	Alu	0.166667
9	73154578	A->G	+	ENSG00000135046	ANXA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	77185853	A->G	+	ENSG00000197969	VPS13A	protein_coding	Intergenic	.	.	Alu	0.545455
9	77185855	A->G	+	ENSG00000197969	VPS13A	protein_coding	Intergenic	.	.	Alu	0.454545
9	77185871	A->G	+	ENSG00000197969	VPS13A	protein_coding	Intergenic	.	.	Alu	0.272727
9	77186007	A->G	+	ENSG00000197969	VPS13A	protein_coding	Intergenic	.	.	Alu	0.181818
9	77994071	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.142857
9	77995681	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.181818
9	77995723	A->G	-	ENSG00000156052	GNAQ	protein_coding	Intergenic	.	.	Alu	0.4
9	83673940	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.0833333
9	83674026	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.162162
9	83696556	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.2
9	83697002	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.25
9	83705268	A->G	-	ENSG00000135018	UBQLN1	protein_coding	Intergenic	.	.	Alu	0.2
9	85724162	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	85727965	A->G	-	ENSG00000135049	AGTPBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	86266788	A->G	-	ENSG00000135070	ISCA1	protein_coding	Intergenic	.	.	Alu	0.2
9	86266791	A->G	-	ENSG00000135070	ISCA1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	86266855	A->G	-	ENSG00000135070	ISCA1	protein_coding	Intergenic	.	.	Alu	0.08
9	86321989	A->G	-	ENSG00000083223	TUT7	protein_coding	Intergenic	.	.	Alu	0.363636
9	86321994	A->G	-	ENSG00000083223	TUT7	protein_coding	Intergenic	.	.	Alu	0.272727
9	86321995	A->G	-	ENSG00000083223	TUT7	protein_coding	Intergenic	.	.	Alu	0.363636
9	89335122	A->G	+	ENSG00000187742	SECISBP2	protein_coding	Intergenic	.	.	Alu	0.2
9	89335136	A->G	+	ENSG00000187742	SECISBP2	protein_coding	Intergenic	.	.	Alu	0.272727
9	89486785	A->G	-	ENSG00000187764	SEMA4D	protein_coding	Intergenic	.	.	Alu	0.142857
9	91294293	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.1875
9	91347614	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.3
9	91351244	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.6
9	91353650	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.666667
9	91353653	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.2
9	91354085	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.266667
9	92840604	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
9	92842377	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
9	92842386	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
9	92971717	A->G	+	ENSG00000127084	FGD3	protein_coding	Intergenic	.	.	Alu	0.181818
9	93007487	A->G	+	ENSG00000127084	FGD3	protein_coding	Intergenic	.	.	Alu	0.176471
9	93007496	A->G	+	ENSG00000127084	FGD3	protein_coding	Intergenic	.	.	Alu	0.222222
9	93007530	A->G	+	ENSG00000127084	FGD3	protein_coding	Intergenic	.	.	Alu	0.333333
9	93007548	A->G	+	ENSG00000127084	FGD3	protein_coding	Intergenic	.	.	Alu	0.142857
9	93007549	A->G	+	ENSG00000127084	FGD3	protein_coding	Intergenic	.	.	Alu	0.142857
9	93007584	A->G	+	ENSG00000127084	FGD3	protein_coding	Intergenic	.	.	Alu	0.3
9	93106509	A->G	+	ENSG00000165233	CARD19	protein_coding	Intergenic	.	.	Alu	0.181818
9	94173144	A->G	+	ENSG00000269946	AL158152.2	lincRNA	Intergenic	.	.	Alu	0.166667
9	94173173	A->G	+	ENSG00000269946	AL158152.2	lincRNA	Intergenic	.	.	Alu	0.25
9	94173206	A->G	+	ENSG00000269946	AL158152.2	lincRNA	Intergenic	.	.	Alu	0.08
9	94453428	A->G	+	ENSG00000148110	MFSD14B	protein_coding	Intergenic	.	.	Alu	0.166667
9	96999994	A->G	-	ENSG00000196312	MFSD14C	protein_coding	Intergenic	.	.	Alu	0.222222
9	97656335	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	97656450	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.388889
9	97656456	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.588235
9	97656458	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.105263
9	97656459	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.526316
9	97656522	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.125
9	97657228	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	97663719	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.5
9	97663959	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.15
9	97663965	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.157895
9	97678388	A->G	+	ENSG00000136936	XPA	protein_coding	Intergenic	.	.	Alu	0.125
9	97903049	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
9	97908062	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.181818
9	97908156	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.4
9	97996693	A->G	+	ENSG00000136938	ANP32B	protein_coding	Intergenic	.	.	Alu	0.117647
9	98005995	A->G	+	ENSG00000136938	ANP32B	protein_coding	Intergenic	.	.	Alu	0.461538
9	98062020	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.181818
9	98067822	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.1875
9	98068204	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.153846
9	98068209	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.181818
9	98068215	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.3
9	98068362	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.272727
9	98068585	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.166667
9	98068604	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.272727
9	98068692	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.454545
9	98068746	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.0952381
9	98068765	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.36
9	98068766	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.208333
9	98110761	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.4
9	98111300	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.133333
9	98111404	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.2
9	98111467	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.1875
9	98115520	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.166667
9	98115529	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.166667
9	98115572	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.2
9	98115578	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.3
9	98115587	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.333333
9	98115621	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.181818
9	98115656	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.166667
9	98116602	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.3
9	98116619	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.4
10	11174986	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.130435
10	11174987	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.155556
10	11175017	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.135135
10	11194098	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.166667
10	11234490	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0740741
10	11239803	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.0571429
10	11239804	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.171429
10	11239830	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.148148
10	11239853	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.16
10	11239859	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.130435
10	11239889	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.142857
10	11239954	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.4
10	11239965	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.133333
10	11240031	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.1875
10	11240040	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.117647
10	11241239	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.285714
10	11241389	A->G	+	ENSG00000048740	CELF2	protein_coding	Intergenic	.	.	Alu	0.583333
10	12007975	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.545455
10	12012343	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.25
10	12024198	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.1
10	12024365	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.214286
10	12025868	A->G	-	ENSG00000151461	UPF2	protein_coding	Intergenic	.	.	Alu	0.307692
10	12137986	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.2
10	12151787	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.130435
10	12151800	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.181818
10	12151805	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.277778
10	12151810	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.133333
10	12151872	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.333333
10	12151873	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.25
10	12151890	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.142857
10	12151912	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.166667
10	12152498	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.153846
10	12152535	A->G	+	ENSG00000065665	SEC61A2	protein_coding	Intergenic	.	.	Alu	0.4
10	12199892	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.3
10	12199927	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.125
10	12199940	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.133333
10	12200822	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.181818
10	12200830	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.25
10	12200858	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.2
10	12200888	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.133333
10	12203851	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.166667
10	12218344	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.214286
10	12218369	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.333333
10	12218379	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.153846
10	12218441	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.214286
10	12218443	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.133333
10	12218478	A->G	+	ENSG00000151465	CDC123	protein_coding	Intergenic	.	.	Alu	0.117647
10	12364494	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.2
10	12368283	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.166667
10	12373692	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.214286
10	12374095	A->G	+	ENSG00000183049	CAMK1D	protein_coding	Intergenic	.	.	Alu	0.181818
10	13113794	A->G	+	ENSG00000123240	OPTN	protein_coding	Intergenic	.	.	Alu	0.125
10	13343751	A->G	-	ENSG00000086475	SEPHS1	protein_coding	Intergenic	.	.	Alu	0.7
10	13343752	A->G	-	ENSG00000086475	SEPHS1	protein_coding	Intergenic	.	.	Alu	0.8
10	13343757	A->G	-	ENSG00000086475	SEPHS1	protein_coding	Intergenic	.	.	Alu	0.3
10	13343792	A->G	-	ENSG00000086475	SEPHS1	protein_coding	Intergenic	.	.	Alu	0.2
10	13625243	A->G	+	ENSG00000165630	PRPF18	protein_coding	Intergenic	.	.	Alu	0.166667
10	14551327	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.153846
10	14575382	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.153846
10	14581808	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.2
10	14582649	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.2
10	14582650	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.125
10	14582658	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.4
10	14594289	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.230769
10	14595523	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.176471
10	14595625	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.105263
10	14595626	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.111111
10	14599585	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.0625
10	14600742	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.1875
10	14600754	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.2
10	14849987	A->G	+	ENSG00000187522	HSPA14	protein_coding	Intergenic	.	.	Alu	0.111111
10	14850096	A->G	+	ENSG00000187522	HSPA14	protein_coding	Intergenic	.	.	Alu	0.0909091
10	14850149	A->G	+	ENSG00000187522	HSPA14	protein_coding	Intergenic	.	.	Alu	0.1
10	14850152	A->G	+	ENSG00000187522	HSPA14	protein_coding	Intergenic	.	.	Alu	0.0952381
10	17686339	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.16
10	17686430	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.115385
10	17686446	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.806452
10	17686454	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.1875
10	17686476	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.310345
10	17686477	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.2
10	17686516	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.636364
10	17686551	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.291667
10	17686557	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.166667
10	17686574	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.333333
10	17686594	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.3
10	17686624	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.176471
10	17686638	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.159091
10	17686639	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.191489
10	17686651	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.76
10	17687430	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0933333
10	17687752	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.057971
10	17688521	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.2
10	21598759	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.363636
10	21598760	A->G	+	ENSG00000078403	MLLT10	protein_coding	Intergenic	.	.	Alu	0.454545
10	21877149	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.230769
10	21877174	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.2
10	21877198	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.272727
10	21877212	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.25
10	21959321	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.214286
10	21959323	A->G	-	ENSG00000136770	DNAJC1	protein_coding	Intergenic	.	.	Alu	0.142857
10	22686743	A->G	-	ENSG00000150867	PIP4K2A	protein_coding	Intergenic	.	.	Alu	0.181818
10	22686745	A->G	-	ENSG00000150867	PIP4K2A	protein_coding	Intergenic	.	.	Alu	0.181818
10	26449755	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.133333
10	26449756	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.133333
10	26449829	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.4
10	26449969	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.2
10	26466599	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.272727
10	26466600	A->G	+	ENSG00000077420	APBB1IP	protein_coding	Intergenic	.	.	Alu	0.181818
10	26760627	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.315789
10	26760645	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.16
10	26760646	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.12
10	26760673	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.151515
10	26760707	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.48
10	26760724	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.818182
10	26760727	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.148148
10	26760766	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.52381
10	26760790	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.363636
10	26760807	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.115385
10	26760863	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.1
10	26760867	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.421053
10	26760951	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.133333
10	26761035	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.222222
10	26761040	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0833333
10	26761051	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.162162
10	26761067	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.428571
10	26761081	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.08
10	26761083	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.56
10	26761121	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26761124	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0571429
10	26761141	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.46875
10	26761190	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.217391
10	26761195	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.227273
10	26761217	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.677419
10	26764899	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0576923
10	26772852	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0625
10	26772870	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.222222
10	26772902	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.133333
10	26772977	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.266667
10	26773437	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.111111
10	26786380	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.181818
10	26788723	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26821201	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.2
10	26830965	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.2
10	27115131	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.222222
10	27115482	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.117647
10	27125726	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.166667
10	27126192	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.21875
10	27126198	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.129032
10	27126199	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.0666667
10	27126265	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.0666667
10	27126277	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.354839
10	27126294	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.0540541
10	27126325	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.075
10	27126379	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.177778
10	27140678	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.105263
10	27141190	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.111111
10	27141233	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.125
10	27141252	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.08
10	27141313	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.148148
10	27143269	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.5
10	27143312	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.111111
10	27143317	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.352941
10	27143330	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.2
10	27201149	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.181818
10	27203573	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.5
10	27221716	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.125
10	27221751	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.25
10	27221757	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.363636
10	27222667	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.214286
10	27222668	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.214286
10	27222750	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.105263
10	27222764	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.133333
10	27222809	A->G	-	ENSG00000107897	ACBD5	protein_coding	Intergenic	.	.	Alu	0.142857
10	27515012	A->G	+	ENSG00000099246	RAB18	protein_coding	Intergenic	.	.	Alu	0.105263
10	27515678	A->G	+	ENSG00000099246	RAB18	protein_coding	Intergenic	.	.	Alu	0.25
10	28525115	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.181818
10	28525125	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.454545
10	28525130	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.6
10	28525143	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.153846
10	28525238	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.2
10	28525259	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.2
10	28535988	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0555556
10	28538835	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0425532
10	28539557	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.365854
10	28539677	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0444444
10	28541481	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.133333
10	28544048	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0512821
10	28544057	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.047619
10	28544066	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0689655
10	28550075	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0869565
10	28551952	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.08
10	28551989	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.142857
10	28563679	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.461538
10	28563680	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.307692
10	28564144	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.416667
10	28564184	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.666667
10	28564185	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.238095
10	28564207	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.407407
10	28564210	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0714286
10	28564215	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0740741
10	28574560	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.2
10	28609243	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.166667
10	28609283	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.153846
10	28609284	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.153846
10	28609288	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.142857
10	28613139	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.117647
10	28613202	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.294118
10	30439766	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0235294
10	30446131	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.2
10	30446140	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.166667
10	30446154	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.230769
10	30452752	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.307692
10	31337742	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.142857
10	31337784	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.227273
10	31337811	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.1875
10	31337881	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.0833333
10	31337893	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.0666667
10	31339650	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.08
10	31339666	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.08
10	31339682	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.1
10	31339716	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.176471
10	31357863	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.5
10	31384185	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.181818
10	31391155	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.272727
10	32290970	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.25
10	32296020	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	32296088	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.153846
10	32297459	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.166667
10	32297559	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.190476
10	32297560	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.190476
10	32303053	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.117647
10	32324448	A->G	-	ENSG00000120616	EPC1	protein_coding	Intergenic	.	.	Alu	0.2
10	32358478	A->G	-	ENSG00000229327	AL391839.1	antisense	Intergenic	.	.	Alu	0.272727
10	32358523	A->G	-	ENSG00000229327	AL391839.1	antisense	Intergenic	.	.	Alu	0.2
10	32358537	A->G	-	ENSG00000229327	AL391839.1	antisense	Intergenic	.	.	Alu	0.3
10	32360701	A->G	-	ENSG00000229327	AL391839.1	antisense	Intergenic	.	.	Alu	0.0909091
10	32360706	A->G	-	ENSG00000229327	AL391839.1	antisense	Intergenic	.	.	Alu	0.12
10	35041614	A->G	-	ENSG00000108094	CUL2	protein_coding	Intergenic	.	.	Alu	0.117647
10	35067533	A->G	-	ENSG00000108094	CUL2	protein_coding	Intergenic	.	.	Alu	0.2
10	35353026	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.142857
10	35353029	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.214286
10	35353161	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.2
10	35353179	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.272727
10	35354420	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.2
10	38020116	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.421053
10	43141498	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.166667
10	43145512	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.125
10	43146009	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.0606061
10	43146627	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.4
10	43167601	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.214286
10	45728072	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.923077
10	45728079	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.428571
10	45728123	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.176471
10	45728136	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.25
10	45728153	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.521739
10	45728163	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.136364
10	45728214	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.4
10	45728239	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.222222
10	45728282	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.157895
10	45728292	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.0810811
10	45728303	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.425
10	45728306	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.473684
10	45728644	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.3
10	45728659	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.181818
10	45975283	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.6
10	45976491	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.181818
10	45976564	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.153846
10	45992830	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.166667
10	45993437	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.166667
10	45994139	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.133333
10	45994284	A->G	+	ENSG00000265354	TIMM23	protein_coding	Intergenic	.	.	Alu	0.133333
10	48421655	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.833333
10	48421658	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.181818
10	48421792	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.3
10	48422261	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.111111
10	48422284	A->G	+	ENSG00000107643	MAPK8	protein_coding	Intergenic	.	.	Alu	0.642857
10	49946025	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.166667
10	49957069	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.5
10	49967053	A->G	+	ENSG00000204152	TIMM23B	protein_coding	Intergenic	.	.	Alu	0.2
10	50068760	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.214286
10	50068811	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.375
10	50068829	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.105263
10	50068838	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.125
10	63204033	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0454545
10	63204063	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.238095
10	63204118	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.121951
10	63205906	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.170732
10	63234682	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63261332	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.117647
10	63261437	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	63458240	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63458269	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.125
10	63458282	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.117647
10	63458283	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.529412
10	63471835	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.307692
10	63471840	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.230769
10	63471987	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.4
10	63472006	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	63472013	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	63472025	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63472923	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.4
10	63492131	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.214286
10	63492190	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.545455
10	63492500	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63492509	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.142857
10	63492522	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.153846
10	63492592	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.133333
10	67886123	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.1875
10	67886140	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67886338	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.3
10	67886411	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.6
10	67886497	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.111111
10	67886508	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.25
10	67892316	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67892475	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.1
10	67893745	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.3
10	67894809	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67894839	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.111111
10	67894948	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.5
10	67895324	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.230769
10	67895348	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67896330	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.117647
10	67896335	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.125
10	67896618	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67896969	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.133333
10	67896970	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67897482	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.133333
10	67897494	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.153846
10	67897506	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67897547	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67897566	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.3
10	67897658	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67898180	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67898184	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.153846
10	67903195	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	68522905	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.357143
10	68522906	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.214286
10	68525514	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intergenic	.	.	Alu	0.2
10	68752617	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.4
10	68752721	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.266667
10	68752734	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.153846
10	68752767	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.181818
10	68757677	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.230769
10	68757923	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.1
10	68758156	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.15
10	68758196	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.130435
10	68758235	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.1
10	68758264	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.333333
10	68758289	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.2
10	68758290	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.1
10	68758315	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.538462
10	68758323	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.785714
10	68758412	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.1875
10	68758434	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.117647
10	68758455	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.1
10	68758457	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.105263
10	68758465	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.368421
10	68758915	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.153846
10	68758933	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.125
10	68759145	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.5
10	68759526	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.272727
10	68759527	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.272727
10	68759951	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.307692
10	68759952	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.153846
10	68759975	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.357143
10	68759976	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.5
10	68760108	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.117647
10	68760176	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.416667
10	68760180	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.153846
10	68760183	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.307692
10	68760251	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.272727
10	68963979	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.166667
10	68974857	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.142857
10	68974902	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.133333
10	68974905	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.133333
10	68974929	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.2
10	68974935	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.266667
10	68977015	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.105263
10	69099969	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.166667
10	69100098	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.125
10	69100099	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.09375
10	69103219	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.166667
10	69134816	A->G	+	ENSG00000122958	VPS26A	protein_coding	Intergenic	.	.	Alu	0.153846
10	69135488	A->G	+	ENSG00000122958	VPS26A	protein_coding	Intergenic	.	.	Alu	0.142857
10	69194266	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.285714
10	69194656	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.3
10	69194673	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.166667
10	69194715	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.4
10	69195846	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.2
10	69195919	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.3
10	69195982	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.166667
10	69196027	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.181818
10	69196237	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.230769
10	69196315	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.4
10	69196336	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.142857
10	69196345	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.133333
10	69380297	A->G	+	ENSG00000156515	HK1	protein_coding	Intergenic	.	.	Alu	0.153846
10	70166948	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.142857
10	70166953	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.0952381
10	70168532	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.0416667
10	70168923	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.375
10	71759398	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.142857
10	72339109	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.125
10	72339145	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.0952381
10	72339185	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.105263
10	72339458	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.181818
10	72339756	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.266667
10	72339806	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.142857
10	73147506	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.166667
10	73153231	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.1
10	73153254	A->G	-	ENSG00000122882	ECD	protein_coding	Intergenic	.	.	Alu	0.363636
10	73373294	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	73377666	A->G	-	ENSG00000138279	ANXA7	protein_coding	Intergenic	.	.	Alu	0.2
10	73377672	A->G	-	ENSG00000138279	ANXA7	protein_coding	Intergenic	.	.	Alu	0.222222
10	73377701	A->G	-	ENSG00000138279	ANXA7	protein_coding	Intergenic	.	.	Alu	0.142857
10	73377709	A->G	-	ENSG00000138279	ANXA7	protein_coding	Intergenic	.	.	Alu	0.428571
10	73377714	A->G	-	ENSG00000138279	ANXA7	protein_coding	Intergenic	.	.	Alu	0.0952381
10	73377720	A->G	-	ENSG00000138279	ANXA7	protein_coding	Intergenic	.	.	Alu	0.105263
10	73737448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
10	73753509	A->G	+	ENSG00000176986	SEC24C	protein_coding	Intergenic	.	.	Alu	0.2
10	73776953	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.266667
10	73777624	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.266667
10	73777789	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.166667
10	73777817	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.133333
10	73777934	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.3
10	73804963	A->G	-	ENSG00000272916	AC022400.7	protein_coding	Intergenic	.	.	Alu	0.181818
10	73805011	A->G	-	ENSG00000272916	AC022400.7	protein_coding	Intergenic	.	.	Alu	0.333333
10	74014344	A->G	+	ENSG00000225761	AL596247.1	sense_intronic	Intergenic	.	.	Alu	0.3
10	74203414	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.4
10	74203422	A->G	+	ENSG00000156110	ADK	protein_coding	Intergenic	.	.	Alu	0.2
10	74846513	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.105263
10	74846518	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.111111
10	74846578	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.166667
10	74859320	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.25
10	74859332	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.142857
10	74859337	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.214286
10	74864642	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.117647
10	74870022	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.3
10	74870024	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.2
10	74870098	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.3
10	74870115	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.230769
10	74871650	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.357143
10	74872469	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.176471
10	74872488	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.125
10	74872561	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.181818
10	74873358	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.2
10	74906549	A->G	+	ENSG00000156650	KAT6B	protein_coding	Intergenic	.	.	Alu	0.3
10	75169830	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.133333
10	75169834	A->G	+	ENSG00000156671	SAMD8	protein_coding	Intergenic	.	.	Alu	0.125
10	79093527	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.2
10	79093570	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.173913
10	79094931	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.15
10	80191347	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.214286
10	80191374	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.315789
10	80191382	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.176471
10	80199571	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.2
10	80199623	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.25
10	80200796	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.176471
10	84145954	A->G	+	ENSG00000165678	GHITM	protein_coding	Intergenic	.	.	Alu	0.117647
10	86464668	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.5
10	86465303	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.181818
10	86465344	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.166667
10	86465399	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.2
10	86513506	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.2
10	86515746	A->G	-	ENSG00000062650	WAPL	protein_coding	Intergenic	.	.	Alu	0.3
10	87073313	A->G	-	ENSG00000148672	GLUD1	protein_coding	Intergenic	.	.	Alu	0.272727
10	87073314	A->G	-	ENSG00000148672	GLUD1	protein_coding	Intergenic	.	.	Alu	0.181818
10	87095885	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.611111
10	87098819	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.2
10	87762671	A->G	-	ENSG00000138138	ATAD1	protein_coding	Intergenic	.	.	Alu	0.272727
10	87871595	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.125
10	87871599	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.192308
10	87871660	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.176471
10	87871764	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0384615
10	87873062	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.179487
10	87873095	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.102564
10	87873112	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0512821
10	87873118	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0512821
10	87873127	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0638298
10	87873159	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0625
10	87873173	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0888889
10	87873197	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0909091
10	87890800	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.153846
10	87890815	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.214286
10	87890921	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.0689655
10	87908520	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.2
10	87909492	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.2
10	87909503	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.181818
10	87940182	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.125
10	87940186	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.133333
10	87940365	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.181818
10	89721410	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.391304
10	89721470	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.470588
10	89721472	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.263158
10	89721490	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.315789
10	89721507	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.111111
10	89721549	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.117647
10	89721580	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.571429
10	90878594	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.1
10	90878657	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.333333
10	90878658	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.333333
10	90878664	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.111111
10	90878707	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.421053
10	90878755	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.125
10	90878775	A->G	+	ENSG00000148688	RPP30	protein_coding	Intergenic	.	.	Alu	0.117647
10	91214217	A->G	+	ENSG00000180628	PCGF5	protein_coding	Intergenic	.	.	Alu	0.727273
10	91804831	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.214286
10	91804843	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.153846
10	91839481	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.2
10	91840265	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.333333
10	91840269	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.117647
10	91840285	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.235294
10	91937094	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.25
10	91942163	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.3
10	91948510	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.277778
10	91948529	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.136364
10	91948532	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.157895
10	91948587	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.357143
10	91949907	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.142857
10	91950929	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.214286
10	91950960	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.142857
10	91953511	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.307692
10	91953512	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.148148
10	91969844	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.214286
10	92318305	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.285714
10	92318347	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.25
10	92324569	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.545455
10	92342383	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.117647
10	92345426	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.5
10	92345918	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.25
10	92345933	A->G	+	ENSG00000198060	5-Mar	protein_coding	Intergenic	.	.	Alu	0.4
10	92686783	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
10	94565943	A->G	+	ENSG00000119969	HELLS	protein_coding	Intergenic	.	.	Alu	0.2
10	94565954	A->G	+	ENSG00000119969	HELLS	protein_coding	Intergenic	.	.	Alu	0.4
10	94566916	A->G	+	ENSG00000119969	HELLS	protein_coding	Intergenic	.	.	Alu	0.181818
10	95681295	A->G	-	ENSG00000119977	TCTN3	protein_coding	Intergenic	.	.	Alu	0.166667
10	95691362	A->G	-	ENSG00000119977	TCTN3	protein_coding	Intergenic	.	.	Alu	0.3
10	95691426	A->G	-	ENSG00000119977	TCTN3	protein_coding	Intergenic	.	.	Alu	0.214286
10	96537716	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.153846
10	96563204	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.142857
10	96563629	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.117647
10	96564180	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.0833333
10	96569119	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.0571429
10	96569869	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.25
10	96569924	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.2
10	96569932	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.5
10	96570878	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.15
10	96570943	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.142857
10	96570994	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.166667
10	96571006	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.1
10	96571011	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.210526
10	96571012	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.105263
10	96580326	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.0810811
10	96580362	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.0740741
10	96704683	A->G	-	ENSG00000155629	PIK3AP1	protein_coding	Intergenic	.	.	Alu	0.181818
10	96841852	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.2
10	96842724	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.153846
10	96845710	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.7
10	96845729	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.25
10	96845978	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.230769
10	96846028	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.272727
10	96846060	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.3
10	96846087	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.307692
10	96846392	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.2
10	96846466	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.333333
10	96846516	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.1875
10	96847033	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.2
10	96847066	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.333333
10	96847067	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.266667
10	96847630	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.5
10	96848511	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.153846
10	96849444	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.1
10	96866629	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.25
10	96866637	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.166667
10	96867560	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.363636
10	96867638	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.166667
10	96872604	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.2
10	96874883	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.105263
10	96874888	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.105263
10	96874898	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.111111
10	96913843	A->G	+	ENSG00000196233	LCOR	protein_coding	Intergenic	.	.	Alu	0.3
10	98166067	A->G	+	ENSG00000166024	R3HCC1L	protein_coding	Intergenic	.	.	Alu	0.181818
11	10765736	A->G	+	ENSG00000198730	CTR9	protein_coding	Intergenic	.	.	Alu	0.125
11	10776817	A->G	+	ENSG00000198730	CTR9	protein_coding	Intergenic	.	.	Alu	0.181818
11	11859826	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.428571
11	11859957	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.1875
11	11859970	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.3125
11	11861188	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.272727
11	11861194	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.272727
11	11861318	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.153846
11	11887618	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.583333
11	11892494	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.5
11	11892499	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.181818
11	11892582	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.272727
11	11892709	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.105263
11	11892736	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.357143
11	11892741	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.1875
11	11892779	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.2
11	11893460	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.181818
11	11893506	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.294118
11	11893530	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.4375
11	11893562	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.0952381
11	11893570	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.0869565
11	11893615	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.0740741
11	11893622	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.125
11	11893682	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.0952381
11	11893738	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.08
11	11894335	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.206897
11	11894336	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.107143
11	11894362	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.1
11	11894418	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.166667
11	11905696	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.142857
11	11907822	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.433333
11	11907824	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.433333
11	11907834	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.103448
11	11907871	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.0833333
11	11907876	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.181818
11	11908322	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.210526
11	11908359	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.166667
11	11908374	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.1
11	11908378	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.0645161
11	11908391	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.181818
11	11908419	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.0967742
11	13323077	A->G	+	ENSG00000133794	ARNTL	protein_coding	Intergenic	.	.	Alu	0.133333
11	13443624	A->G	-	ENSG00000148925	BTBD10	protein_coding	Intergenic	.	.	Alu	0.2
11	13443657	A->G	-	ENSG00000148925	BTBD10	protein_coding	Intergenic	.	.	Alu	0.3
11	13673299	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.636364
11	13682652	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.117647
11	13683129	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.125
11	13683137	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.3125
11	13683138	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.176471
11	13683272	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.230769
11	13683299	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.285714
11	13683313	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.117647
11	13683314	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.111111
11	13683375	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	13703213	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.428571
11	13703219	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.4
11	13703226	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	13703247	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.166667
11	13703258	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.388889
11	13703263	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.1875
11	13703284	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.166667
11	13703323	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.416667
11	13703329	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.111111
11	13703331	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.333333
11	14305827	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.181818
11	14305828	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.181818
11	14306400	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.266667
11	14331580	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.142857
11	14331582	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.142857
11	14340234	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.909091
11	14340235	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.909091
11	14340373	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.5
11	14340395	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.181818
11	14346962	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.0869565
11	14346987	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.153846
11	14352826	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.5
11	14353506	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.416667
11	14353507	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.272727
11	14353566	A->G	-	ENSG00000133818	RRAS2	protein_coding	Intergenic	.	.	Alu	0.230769
11	14478725	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.125
11	14478731	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.59375
11	14515967	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.125
11	14516025	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.230769
11	14516044	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.416667
11	14516047	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.235294
11	14516082	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.117647
11	14516085	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.473684
11	14516088	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.105263
11	14516091	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.176471
11	14516124	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.1875
11	14516302	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.142857
11	14516405	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.4
11	14650285	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.0285714
11	14670906	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.315789
11	14670918	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.1
11	14670959	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.08
11	14670983	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.0769231
11	14670984	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.08
11	14671773	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.227273
11	14671846	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.307692
11	14671849	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.333333
11	14890812	A->G	-	ENSG00000186104	CYP2R1	protein_coding	Intergenic	.	.	Alu	0.111111
11	16740570	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0697674
11	16740692	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0526316
11	16756529	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.241379
11	16756543	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.103448
11	16756695	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.1
11	16756733	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.153846
11	17076645	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.216216
11	17076650	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.05
11	17125653	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.6
11	17125655	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.5
11	17125712	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.666667
11	17125720	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.2
11	17126353	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.210526
11	17126374	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.235294
11	17133725	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.2
11	17300191	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.2
11	17300194	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.4
11	17303101	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.3
11	17337912	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intergenic	.	.	Alu	0.130435
11	18333980	A->G	+	ENSG00000110768	GTF2H1	protein_coding	Intergenic	.	.	Alu	0.125
11	18503953	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.2
11	18505955	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.153846
11	18506449	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.181818
11	18507902	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.230769
11	18507928	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.166667
11	18507931	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.142857
11	18507945	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.133333
11	18507986	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.125
11	18507994	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.133333
11	18508000	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.176471
11	18508334	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.2
11	18508414	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.3
11	18512242	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.133333
11	18512284	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.166667
11	18513333	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.133333
11	18513393	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.214286
11	18513398	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.142857
11	18513810	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.181818
11	18513912	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.2
11	18514024	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.363636
11	18514071	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.818182
11	18520391	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.153846
11	18520491	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.142857
11	18525302	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.272727
11	18632063	A->G	-	ENSG00000179119	SPTY2D1	protein_coding	Intergenic	.	.	Alu	0.2
11	18632084	A->G	-	ENSG00000179119	SPTY2D1	protein_coding	Intergenic	.	.	Alu	0.166667
11	18632089	A->G	-	ENSG00000179119	SPTY2D1	protein_coding	Intergenic	.	.	Alu	0.363636
11	20504210	A->G	+	ENSG00000185238	PRMT3	protein_coding	Intergenic	.	.	Alu	0.3
11	32906648	A->G	+	ENSG00000060749	QSER1	protein_coding	Intergenic	.	.	Alu	0.272727
11	33074657	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.173913
11	33074672	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.192308
11	33074674	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.26087
11	33074697	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.111111
11	33074728	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.4
11	33074739	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.5
11	33074748	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.692308
11	33075290	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.181818
11	33075291	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.2
11	33075484	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.272727
11	33075486	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.2
11	33262917	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.136364
11	33263393	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33263482	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33263496	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	33263536	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.173913
11	33263538	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0869565
11	33266627	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	33266652	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.26087
11	33266653	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.0869565
11	33267948	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33267949	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33269997	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.272727
11	33270002	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.25
11	33272964	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33272976	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.307692
11	33273034	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33273054	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33276866	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33282107	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33282128	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	33282208	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	33282233	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	33282238	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.357143
11	33282310	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33282634	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33282635	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.333333
11	33282638	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33283371	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33283372	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33284536	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33284538	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	33284574	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	33285836	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	33285865	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	33285872	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.2
11	33285984	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.125
11	33756771	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.12
11	33756803	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.37931
11	33756870	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.142857
11	33756873	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.266667
11	33756945	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	33756951	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.272727
11	33757840	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.296296
11	33757899	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.225806
11	33764715	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.142857
11	33764717	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.15
11	33764891	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.125
11	33764898	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.285714
11	33764938	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.4
11	34060457	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.25
11	34060622	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.315789
11	34061287	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.25
11	34061333	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.157895
11	34061388	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.125
11	34061469	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.214286
11	34061470	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.285714
11	34076792	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.363636
11	34076810	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.4
11	34076814	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
11	34076864	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0833333
11	34076874	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.655172
11	34076880	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.147059
11	34076909	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0512821
11	34079152	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0425532
11	34079209	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0625
11	34079221	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0625
11	34079279	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.428571
11	34079280	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.217391
11	34079332	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.466667
11	34079341	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.108108
11	34079345	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0512821
11	34079355	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.305556
11	34083794	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	34084137	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.263158
11	34084139	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.2
11	34084189	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.105263
11	34084206	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.105263
11	34092884	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.181818
11	34094960	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	34094976	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	34107703	A->G	+	ENSG00000135372	NAT10	protein_coding	Intergenic	.	.	Alu	0.166667
11	34107717	A->G	+	ENSG00000135372	NAT10	protein_coding	Intergenic	.	.	Alu	0.117647
11	34107764	A->G	+	ENSG00000135372	NAT10	protein_coding	Intergenic	.	.	Alu	0.3
11	35187137	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.125
11	35187940	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0666667
11	35187943	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.125
11	35187944	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.133333
11	35212453	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.0909091
11	35212877	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.333333
11	35212924	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.181818
11	35212953	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.3
11	35213419	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.230769
11	35213441	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.133333
11	35216773	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.310345
11	35216806	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.361111
11	35218722	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.3
11	35218723	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.5
11	36486128	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4375
11	36486136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
11	36486137	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
11	36486210	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
11	36486227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.291667
11	36486257	A->G	-	.	.	.	Intergenic	.	.	Alu	0.121212
11	36486270	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
11	36486306	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
11	36486311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.410256
11	36486312	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
11	36486314	A->G	-	.	.	.	Intergenic	.	.	Alu	0.128205
11	36486826	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
11	36486832	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
11	36486844	A->G	-	.	.	.	Intergenic	.	.	Alu	0.09375
11	36486845	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
11	36486872	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
11	36486904	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	36486991	A->G	-	.	.	.	Intergenic	.	.	Alu	0.444444
11	36487008	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
11	36487009	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	43319500	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.363636
11	43319558	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.181818
11	43324201	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.0769231
11	43324232	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.208333
11	43324256	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.285714
11	43324494	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.0909091
11	43324495	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.0857143
11	43324569	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.166667
11	43324571	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.24
11	43383017	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.181818
11	43386987	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.2
11	43417716	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.2
11	43419712	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.181818
11	43424167	A->G	+	ENSG00000052841	TTC17	protein_coding	Intergenic	.	.	Alu	0.181818
11	44588999	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.181818
11	44589048	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.0909091
11	44589055	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.173913
11	44589056	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.0869565
11	44589070	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.166667
11	44589073	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.1
11	44589136	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.304348
11	44589159	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.111111
11	44589171	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.166667
11	44591920	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.166667
11	44612719	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.307692
11	44612795	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.166667
11	44612819	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.153846
11	44612822	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.166667
11	44612844	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.5
11	44612848	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.272727
11	44612851	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.181818
11	44613690	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.230769
11	44613758	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.3
11	44613769	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.181818
11	44613783	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.2
11	44614093	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.266667
11	44614112	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.1875
11	44614113	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.25
11	45864618	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.3
11	45864957	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.153846
11	45864980	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.285714
11	45865012	A->G	+	ENSG00000121671	CRY2	protein_coding	Intergenic	.	.	Alu	0.307692
11	45911761	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.0869565
11	45912436	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.272727
11	45912857	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.136364
11	45912889	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.111111
11	45912961	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.181818
11	45913082	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.25
11	45913087	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.272727
11	45913095	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.307692
11	45913096	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.230769
11	45913102	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.214286
11	46111432	A->G	-	ENSG00000135365	PHF21A	protein_coding	Intergenic	.	.	Alu	0.2
11	46358571	A->G	+	ENSG00000149091	DGKZ	protein_coding	Intergenic	.	.	Alu	0.181818
11	46358577	A->G	+	ENSG00000149091	DGKZ	protein_coding	Intergenic	.	.	Alu	0.166667
11	46454228	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.363636
11	46454952	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.2
11	46563419	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.15
11	46563425	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.105263
11	46566193	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.166667
11	46568375	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.153846
11	46571575	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.3
11	46575333	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.117647
11	46575370	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.2
11	46575397	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.214286
11	46575405	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.5
11	46580915	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.6
11	46580920	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.4
11	46580990	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.5
11	46581216	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.1875
11	46581507	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.230769
11	46581852	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.2
11	46581858	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.25
11	46581899	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.133333
11	46581937	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.133333
11	46582008	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.3
11	46586189	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.2
11	46586240	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.214286
11	46586287	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.7
11	46586297	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.2
11	46587175	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.153846
11	46589680	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.333333
11	46589687	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.25
11	46592566	A->G	-	ENSG00000110497	AMBRA1	protein_coding	Intergenic	.	.	Alu	0.125
11	46619567	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.181818
11	46619589	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.833333
11	46619631	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.5
11	46619662	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.133333
11	46619801	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.181818
11	46620197	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.142857
11	46620223	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.181818
11	46620357	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.105263
11	46620526	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.142857
11	46624106	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.105263
11	46624192	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.111111
11	46624204	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.130435
11	46624774	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.117647
11	46625469	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.357143
11	46625499	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.157895
11	46627258	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.125
11	46627259	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.1875
11	46630672	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.117647
11	46631236	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.117647
11	46631271	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.105263
11	46631294	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.105263
11	46631742	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.157895
11	46631794	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.0869565
11	46631804	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.107143
11	46631829	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.08
11	46632891	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.166667
11	46633142	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.25
11	46633164	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.266667
11	46633714	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.363636
11	46633774	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.461538
11	46636657	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.111111
11	46636795	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.235294
11	46636823	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.214286
11	46636857	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.636364
11	46638182	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.181818
11	46638317	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.2
11	46639233	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.185185
11	46639971	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.2
11	46640572	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.263158
11	46640631	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.285714
11	46640638	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.166667
11	46640644	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.0769231
11	46641173	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.153846
11	46658438	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.125
11	46658756	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.133333
11	46658797	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.117647
11	46683726	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	Intergenic	.	.	Alu	0.25
11	47163110	A->G	-	ENSG00000149179	C11orf49	protein_coding	Intergenic	.	.	Alu	0.636364
11	47163115	A->G	-	ENSG00000149179	C11orf49	protein_coding	Intergenic	.	.	Alu	0.454545
11	47163765	A->G	-	ENSG00000149179	C11orf49	protein_coding	Intergenic	.	.	Alu	0.181818
11	47163787	A->G	-	ENSG00000149179	C11orf49	protein_coding	Intergenic	.	.	Alu	0.181818
11	47168588	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.34375
11	47168589	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.451613
11	47168593	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.16129
11	47168597	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.16
11	47168617	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.103448
11	47168629	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0555556
11	47168653	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.102041
11	47168659	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.354167
11	47168687	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.108696
11	47168688	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0625
11	47168690	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0416667
11	47168697	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.16
11	47168705	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.155556
11	47168716	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0408163
11	47168718	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0576923
11	47168726	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0444444
11	47168741	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0727273
11	47168747	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0327869
11	47168750	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.234375
11	47168774	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.117647
11	47168787	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.151515
11	47168795	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.415385
11	47168796	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.145161
11	47168798	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.35
11	47168818	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0851064
11	47169055	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.190476
11	47169124	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.428571
11	47169132	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.363636
11	47169155	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.08
11	47169166	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0740741
11	47169214	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0740741
11	47169237	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.315789
11	47169701	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.146341
11	47169709	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.354839
11	47169766	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
11	47169774	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.285714
11	47169787	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0857143
11	47169812	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
11	47170077	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.12963
11	47170122	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0444444
11	47170145	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.157895
11	47170159	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.125
11	47170202	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0789474
11	47170224	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0882353
11	47170238	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.214286
11	47170262	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.170732
11	47170272	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.138889
11	47170710	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0408163
11	47170798	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.05
11	47170824	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0322581
11	47170864	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0322581
11	47170889	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.136364
11	47170894	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.152542
11	47170907	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.175
11	47287267	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.181818
11	47287410	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0666667
11	47287427	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.409091
11	47287431	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.44
11	47287466	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.269231
11	47287510	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0666667
11	47287607	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.428571
11	47287671	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.142857
11	47287672	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.142857
11	47287678	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.333333
11	47287686	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0588235
11	47287905	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.230769
11	47288156	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.529412
11	47288196	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.421053
11	47288215	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47309941	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.230769
11	47309999	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.3
11	47310089	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.181818
11	47310281	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.214286
11	47310282	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.142857
11	47310827	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.533333
11	47313859	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.166667
11	47313860	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.25
11	47313864	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.181818
11	47319195	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.357143
11	47319244	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.466667
11	47319342	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.1
11	47319372	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.115385
11	47319401	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0967742
11	47319736	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.1
11	47320603	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.230769
11	47320799	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.117647
11	47480263	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47480269	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47481944	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.130435
11	47481986	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47482037	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.238095
11	47482046	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.130435
11	47482095	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47482102	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.105263
11	47482103	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
11	47482154	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.214286
11	47482155	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.285714
11	47482157	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.307692
11	47482170	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.5
11	47492267	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3
11	47492478	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47492718	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.363636
11	47511124	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47514814	A->G	-	ENSG00000270072	AC090559.2	sense_intronic	Intergenic	.	.	Alu	0.230769
11	47515971	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.545455
11	47516055	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.117647
11	47516875	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.3
11	47516994	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.363636
11	47517062	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.571429
11	47519359	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47519368	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47519399	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47521973	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47521978	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47522468	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.133333
11	47522744	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47525567	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.259259
11	47525568	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.111111
11	47525840	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47525876	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.105263
11	47528572	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47528575	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47528998	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47529150	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47529163	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47529169	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47529180	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.333333
11	47529575	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47529735	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	47529738	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.105263
11	47529752	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.214286
11	47529758	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.105263
11	47531380	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.125
11	47531402	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47533456	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47533734	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47536206	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47536212	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47536221	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47536283	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47536284	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47536330	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.190476
11	47536514	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.125
11	47536538	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.1
11	47536596	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	47536641	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.285714
11	47536698	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47536706	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.416667
11	47538048	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.111111
11	47538199	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.222222
11	47540762	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47542222	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	47543224	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.25
11	47543277	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.125
11	47543347	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47543397	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.5
11	47543697	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47545400	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47548075	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.117647
11	47550217	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.545455
11	47550223	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.583333
11	47550280	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.571429
11	47550319	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.2
11	47550419	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.454545
11	47550448	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.615385
11	47550449	A->G	-	ENSG00000149187	CELF1	protein_coding	Intergenic	.	.	Alu	0.285714
11	47613831	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	47613865	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	47614496	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
11	47616606	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	47621841	A->G	-	ENSG00000109919	MTCH2	protein_coding	Intergenic	.	.	Alu	0.2
11	47740198	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.3
11	47740218	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.363636
11	47740686	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.25
11	47740986	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.166667
11	47741211	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.117647
11	47741224	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.294118
11	47741333	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.1
11	47741733	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.176471
11	47741801	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.0769231
11	47743400	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.142857
11	47743401	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.153846
11	47744352	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.214286
11	47749041	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.470588
11	47749042	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.352941
11	47749055	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.117647
11	47749235	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.214286
11	47749240	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.357143
11	47758474	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.125
11	47761373	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.136364
11	47761667	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.166667
11	47762070	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.1
11	47762193	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.3
11	47762195	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.272727
11	47762228	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.166667
11	47762308	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.307692
11	47762328	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.615385
11	47762353	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47762399	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.125
11	47762400	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.125
11	47762593	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.125
11	47763219	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.133333
11	47763281	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.333333
11	57719726	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.230769
11	57719792	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.333333
11	57719794	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.4
11	57719798	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.142857
11	57720501	A->G	+	ENSG00000213593	TMX2	protein_coding	Intergenic	.	.	Alu	0.2
11	59588368	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.166667
11	59588749	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.3125
11	59588780	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.153846
11	59589196	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.2
11	59593002	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.142857
11	59593044	A->G	-	ENSG00000110048	OSBP	protein_coding	Intergenic	.	.	Alu	0.176471
11	60975532	A->G	+	ENSG00000013725	CD6	protein_coding	Intergenic	.	.	Alu	0.214286
11	61319027	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.166667
11	61319071	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.125
11	61319110	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.111111
11	61324658	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.3
11	61325276	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	61410351	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.333333
11	61410359	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.166667
11	61410363	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.166667
11	61412366	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.352941
11	61412379	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.125
11	61412422	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.230769
11	61412464	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.285714
11	61412470	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.181818
11	61412510	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.307692
11	61412553	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.153846
11	61412556	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.214286
11	61412561	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.285714
11	61412562	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.285714
11	61412988	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.0769231
11	61412989	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.111111
11	61413047	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.333333
11	61413124	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.55
11	61413143	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.111111
11	61413144	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.294118
11	61413148	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.117647
11	61413184	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.571429
11	61413197	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.142857
11	61413200	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.142857
11	61413373	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.2
11	61413375	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.2
11	61413402	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.363636
11	61413448	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.416667
11	61413451	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.166667
11	61413468	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.333333
11	61413487	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.357143
11	61413548	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.294118
11	61413555	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.625
11	61413568	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.25
11	61413569	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.16
11	61413607	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.315789
11	61413615	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.333333
11	61414421	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.307692
11	61428321	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.125
11	61428476	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.25
11	62617654	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.266667
11	62617658	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.1875
11	62617695	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.166667
11	62617733	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.133333
11	62617765	A->G	-	ENSG00000149541	B3GAT3	protein_coding	Intergenic	.	.	Alu	0.1
11	62764376	A->G	+	ENSG00000168002	POLR2G	protein_coding	Intergenic	.	.	Alu	0.333333
11	62764382	A->G	+	ENSG00000168002	POLR2G	protein_coding	Intergenic	.	.	Alu	0.454545
11	62764735	A->G	+	ENSG00000168002	POLR2G	protein_coding	Intergenic	.	.	Alu	0.25
11	62813227	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62816697	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.181818
11	62816848	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.153846
11	62817000	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.222222
11	62817090	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.25
11	62819615	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.25
11	62819761	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0952381
11	62819796	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0833333
11	62820272	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62821151	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.210526
11	62821159	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.125
11	62821277	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62821823	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.181818
11	62822011	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.105263
11	62822118	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.125
11	62828217	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.25
11	62828229	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.333333
11	62828247	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62828253	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.181818
11	62828562	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.142857
11	62828604	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.12
11	62828614	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0833333
11	62828626	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.24
11	62828643	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.133333
11	62828650	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.117647
11	62828664	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.7
11	62829820	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.1
11	62830201	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62830251	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.125
11	62838043	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.384615
11	62838182	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.133333
11	62838213	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.652174
11	62838218	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.125
11	62838229	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.157895
11	62838238	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.578947
11	62838291	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.5625
11	62838658	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.6
11	62838675	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.166667
11	62840072	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.235294
11	62841315	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.0434783
11	63854469	A->G	+	ENSG00000072518	MARK2	protein_coding	Intergenic	.	.	Alu	0.3
11	64188615	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.3
11	64190065	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.153846
11	64190100	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.285714
11	64190130	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.363636
11	64195925	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.235294
11	64195998	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.133333
11	64196176	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.166667
11	64196253	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.2
11	64198447	A->G	+	ENSG00000168439	STIP1	protein_coding	Intergenic	.	.	Alu	0.142857
11	64794917	A->G	-	ENSG00000168067	MAP4K2	protein_coding	Intergenic	.	.	Alu	0.230769
11	64795144	A->G	-	ENSG00000168067	MAP4K2	protein_coding	Intergenic	.	.	Alu	0.230769
11	64795175	A->G	-	ENSG00000168067	MAP4K2	protein_coding	Intergenic	.	.	Alu	0.181818
11	64903987	A->G	-	ENSG00000110046	ATG2A	protein_coding	Intergenic	.	.	Alu	0.0769231
11	64903989	A->G	-	ENSG00000110046	ATG2A	protein_coding	Intergenic	.	.	Alu	0.461538
11	64904001	A->G	-	ENSG00000110046	ATG2A	protein_coding	Intergenic	.	.	Alu	0.125
11	64904043	A->G	-	ENSG00000110046	ATG2A	protein_coding	Intergenic	.	.	Alu	0.181818
11	64904066	A->G	-	ENSG00000110046	ATG2A	protein_coding	Intergenic	.	.	Alu	0.636364
11	64904195	A->G	-	ENSG00000110046	ATG2A	protein_coding	Intergenic	.	.	Alu	0.363636
11	64904215	A->G	-	ENSG00000110046	ATG2A	protein_coding	Intergenic	.	.	Alu	0.333333
11	64904232	A->G	-	ENSG00000110046	ATG2A	protein_coding	Intergenic	.	.	Alu	0.727273
11	65098096	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.615385
11	65100780	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.2
11	65100781	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.3
11	65100811	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.181818
11	65101507	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.230769
11	65102870	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.181818
11	65102958	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.153846
11	65102960	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.363636
11	65103051	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.2
11	65103965	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.3
11	65104006	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.3
11	65409543	A->G	+	ENSG00000126391	FRMD8	protein_coding	Intergenic	.	.	Alu	0.545455
11	65420844	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
11	65660796	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.116667
11	65660874	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.129032
11	65660915	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.310345
11	65660917	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.125
11	65660976	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.428571
11	65660982	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.111111
11	65660987	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.111111
11	65661103	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.272727
11	65661108	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.428571
11	65661127	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.647059
11	65661168	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0666667
11	65661192	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.5625
11	65661195	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.305556
11	65661199	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.27027
11	65661200	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0540541
11	65661203	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0540541
11	65661230	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0444444
11	65661243	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0789474
11	65661245	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0526316
11	65661277	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0555556
11	65661291	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.222222
11	65661299	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0461538
11	65661300	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0307692
11	65661302	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0615385
11	65661308	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0428571
11	65661316	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0447761
11	65774676	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
11	65898832	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.181818
11	66248391	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
11	66629440	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.115385
11	66630326	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0769231
11	66630367	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66630404	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.08
11	66630420	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0571429
11	66630422	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0555556
11	66630434	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66630469	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.107143
11	66630497	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66630518	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0833333
11	66630522	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0526316
11	66630526	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0526316
11	66630527	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.102564
11	66630723	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66631453	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66631741	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.1
11	66631752	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.217391
11	66631815	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.130435
11	66631837	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.235294
11	66633317	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66633330	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.272727
11	66633344	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.1
11	66633383	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0740741
11	66633409	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.137931
11	66633484	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.304348
11	66633535	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66633558	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.333333
11	66633563	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4375
11	66633627	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.5
11	66633634	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.4
11	66633669	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.3
11	66633763	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66633935	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66633956	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.333333
11	66634013	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66634042	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.363636
11	66634206	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.0689655
11	66637182	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66647927	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.230769
11	66647949	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66647988	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.25
11	66648384	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.133333
11	66648463	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66648553	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66648586	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.208333
11	66648660	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66648663	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.138889
11	66648667	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.324324
11	66648757	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66648758	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66649063	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0555556
11	66649106	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66649107	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.21875
11	66649124	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0810811
11	66649146	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0857143
11	66649172	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66649187	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0540541
11	66649214	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66649224	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0789474
11	66649438	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0588235
11	66649470	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.16129
11	66649489	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0526316
11	66650315	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.307692
11	66650320	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.166667
11	66650345	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.285714
11	66650394	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66650399	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.130435
11	66650420	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66650424	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66650450	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.111111
11	66650451	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.222222
11	66653523	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0952381
11	66653564	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.115385
11	66653605	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0909091
11	66653936	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66654044	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66654051	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0714286
11	66654158	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66654770	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.129032
11	66654899	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.0571429
11	66654902	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.25
11	66654918	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.151515
11	66654958	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.115385
11	66654964	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66654966	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.105263
11	66655504	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.08
11	66658761	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66658784	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.125
11	66658816	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.5
11	66658843	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66662586	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66663591	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66664780	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
11	66841956	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.25
11	66841968	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.117647
11	66842002	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.176471
11	67125229	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.133333
11	67125314	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.266667
11	67125322	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67127836	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.1875
11	67129379	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.181818
11	67130315	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.272727
11	67130334	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.181818
11	67131655	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.3
11	67135945	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.75
11	67135969	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.428571
11	67136020	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.230769
11	67136023	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.214286
11	67136882	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.3
11	67136945	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.3125
11	67138720	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.363636
11	67139519	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67139607	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.133333
11	67139827	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.416667
11	67139838	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.153846
11	67139907	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67142100	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.333333
11	67145370	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67145411	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.142857
11	67146540	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.2
11	67146648	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.5
11	67147795	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.153846
11	67147819	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.153846
11	67148300	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.166667
11	67151585	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.181818
11	67151845	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.235294
11	67151862	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.222222
11	67151878	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.266667
11	67152595	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.125
11	67293718	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.1
11	67293765	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.0909091
11	67400106	A->G	-	ENSG00000172531	PPP1CA	protein_coding	Intergenic	.	.	Alu	0.3
11	68056774	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.142857
11	68056775	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.214286
11	68056793	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.153846
11	68085393	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.125
11	68085420	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.333333
11	68085928	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.181818
11	68086058	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.111111
11	68086703	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.545455
11	68086731	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.0952381
11	68087261	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.111111
11	68087399	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.153846
11	68087468	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.142857
11	68088826	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.315789
11	68094495	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.181818
11	68095215	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.285714
11	68095240	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.117647
11	68096278	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68096279	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68104860	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.181818
11	68112549	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.4
11	68119966	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.105263
11	68119972	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.157895
11	68120003	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.545455
11	68191063	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.25
11	68202048	A->G	-	ENSG00000110066	KMT5B	protein_coding	Intergenic	.	.	Alu	0.166667
11	68476905	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.214286
11	68476973	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.142857
11	68478288	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.272727
11	68483742	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.0869565
11	68485812	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.466667
11	68491456	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.461538
11	68491585	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.153846
11	68491597	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.176471
11	68536395	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.4
11	68561886	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.153846
11	68561893	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.166667
11	68605187	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.133333
11	68606427	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.0909091
11	68606536	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.153846
11	68607825	A->G	+	ENSG00000110075	PPP6R3	protein_coding	Intergenic	.	.	Alu	0.133333
11	68759131	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.6
11	68759135	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.166667
11	68759137	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.25
11	68767409	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.166667
11	68767434	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.583333
11	68786144	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.181818
11	68786190	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.315789
11	68786218	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.105263
11	68787180	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.111111
11	68787192	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.214286
11	68790160	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.105263
11	68790168	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.428571
11	68790173	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.105263
11	68790195	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.1
11	68790225	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.25
11	68790250	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.2
11	68792082	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.190476
11	68792086	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.0952381
11	68792095	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.1
11	68792109	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.217391
11	68792148	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.538462
11	68792948	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.133333
11	68792965	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.222222
11	68792966	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.111111
11	68792971	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.125
11	68792991	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.0952381
11	68808644	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.2
11	68809560	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.166667
11	68809579	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.285714
11	68809605	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.153846
11	68809921	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.153846
11	68814772	A->G	-	ENSG00000110090	CPT1A	protein_coding	Intergenic	.	.	Alu	0.153846
11	72061174	A->G	-	ENSG00000137497	NUMA1	protein_coding	Intergenic	.	.	Alu	0.2
11	72715685	A->G	-	ENSG00000186635	ARAP1	protein_coding	Intergenic	.	.	Alu	0.3
11	72715717	A->G	-	ENSG00000186635	ARAP1	protein_coding	Intergenic	.	.	Alu	0.153846
11	73079005	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.545455
11	73081959	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.2
11	73082193	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.181818
11	73094390	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.636364
11	73099196	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.166667
11	73119180	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	1
11	73119264	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.4
11	73119637	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.416667
11	73131592	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.333333
11	73134880	A->G	-	ENSG00000137478	FCHSD2	protein_coding	Intergenic	.	.	Alu	0.238095
11	73701919	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.181818
11	73707877	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.230769
11	73712833	A->G	-	ENSG00000175582	RAB6A	protein_coding	Intergenic	.	.	Alu	0.2
11	73891498	A->G	+	ENSG00000175575	PAAF1	protein_coding	Intergenic	.	.	Alu	0.7
11	74966795	A->G	+	ENSG00000118363	SPCS2	protein_coding	Intergenic	.	.	Alu	0.357143
11	74966803	A->G	+	ENSG00000118363	SPCS2	protein_coding	Intergenic	.	.	Alu	0.153846
11	74966866	A->G	+	ENSG00000118363	SPCS2	protein_coding	Intergenic	.	.	Alu	0.111111
11	74967540	A->G	+	ENSG00000118363	SPCS2	protein_coding	Intergenic	.	.	Alu	0.2
11	74967541	A->G	+	ENSG00000118363	SPCS2	protein_coding	Intergenic	.	.	Alu	0.3
11	75400902	A->G	+	ENSG00000149273	RPS3	protein_coding	Intergenic	.	.	Alu	0.181818
11	75408636	A->G	+	ENSG00000149273	RPS3	protein_coding	Intergenic	.	.	Alu	0.181818
11	76362898	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.2
11	76362917	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.2
11	76362950	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.214286
11	76363035	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.153846
11	76363057	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.133333
11	76363081	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.15
11	76363116	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.133333
11	76363656	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.153846
11	76363726	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.166667
11	76363801	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.272727
11	76363892	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.538462
11	76365051	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.0952381
11	76365078	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.105263
11	76365084	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.277778
11	76365089	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.222222
11	76365160	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.285714
11	76365170	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.230769
11	76365439	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.259259
11	76365504	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.266667
11	76365522	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.387097
11	76365530	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.0769231
11	76365544	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.0869565
11	76365548	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.130435
11	76365600	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.117647
11	76365614	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.210526
11	76365619	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.105263
11	76365662	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.2
11	77614111	A->G	-	ENSG00000074201	CLNS1A	protein_coding	Intergenic	.	.	Alu	0.166667
11	77614116	A->G	-	ENSG00000074201	CLNS1A	protein_coding	Intergenic	.	.	Alu	0.142857
11	77614144	A->G	-	ENSG00000074201	CLNS1A	protein_coding	Intergenic	.	.	Alu	0.727273
11	77614146	A->G	-	ENSG00000074201	CLNS1A	protein_coding	Intergenic	.	.	Alu	0.363636
11	77715667	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.153846
11	77715679	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	77735825	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.2
11	77735903	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.2
11	77754815	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.2
11	77754886	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.1875
11	77754887	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.133333
11	77760067	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.545455
11	77781236	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.2
11	77781247	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.25
11	77781255	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	77810657	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	77810658	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	77814306	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.4
11	77814375	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.307692
11	77814391	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.357143
11	77814417	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.181818
11	77817855	A->G	-	ENSG00000048649	RSF1	protein_coding	Intergenic	.	.	Alu	0.285714
11	77992334	A->G	-	ENSG00000149262	INTS4	protein_coding	Intergenic	.	.	Alu	0.230769
11	77992339	A->G	-	ENSG00000149262	INTS4	protein_coding	Intergenic	.	.	Alu	0.461538
11	78330908	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	78330915	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.181818
11	78330929	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.416667
11	78330930	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	78331331	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.3
11	78336151	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.166667
11	78351105	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.666667
11	78375173	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.142857
11	78388193	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.166667
11	78388194	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.142857
11	78390368	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.117647
11	78390383	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.142857
11	78390467	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.333333
11	78390473	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.230769
11	78390477	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.285714
11	78390542	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.333333
11	78392054	A->G	-	ENSG00000254649	AP003086.3	antisense	Intergenic	.	.	Alu	0.181818
11	78406407	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.133333
11	78406655	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	78406657	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.153846
11	78413884	A->G	-	ENSG00000033327	GAB2	protein_coding	Intergenic	.	.	Alu	0.2
11	83065547	A->G	-	ENSG00000137502	RAB30	protein_coding	Intergenic	.	.	Alu	0.133333
11	83179379	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.2
11	83179383	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.333333
11	83179384	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.238095
11	83179411	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.190476
11	83179415	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.130435
11	83179485	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.0869565
11	83179511	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.0952381
11	83179512	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.190476
11	83179513	A->G	+	ENSG00000165494	PCF11	protein_coding	Intergenic	.	.	Alu	0.0952381
11	85954821	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	85954895	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
11	85955101	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	85955272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
11	85971619	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.2
11	85971624	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.454545
11	85971698	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.2
11	85971700	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.615385
11	85971880	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.181818
11	86008457	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0740741
11	86030996	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.230769
11	86037616	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0952381
11	86037660	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.111111
11	86037666	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.15
11	86039782	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.142857
11	86039790	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.142857
11	86039814	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.363636
11	86045401	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0540541
11	86045402	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.181818
11	86045432	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.16
11	86046881	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.35
11	86046910	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.157895
11	86048599	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0425532
11	86049194	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0789474
11	86049970	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.363636
11	86051578	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0555556
11	86053633	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0909091
11	86053665	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0833333
11	86053795	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.1
11	86054887	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.3
11	86054888	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.3
11	86054909	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.133333
11	86054910	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.133333
11	86055221	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0714286
11	86055230	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.44
11	86055247	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.12
11	86059541	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0606061
11	86059646	A->G	-	ENSG00000073921	PICALM	protein_coding	Intergenic	.	.	Alu	0.0588235
11	88328739	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.2
11	88328766	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.181818
11	88328796	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.4
11	88328828	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.266667
11	88329316	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.166667
11	88329319	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.25
11	88329334	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.363636
11	88329338	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.3
11	88329370	A->G	-	ENSG00000109861	CTSC	protein_coding	Intergenic	.	.	Alu	0.333333
11	93790878	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.133333
11	93792680	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.136364
11	93792760	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.1
11	93792794	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.0869565
11	93792820	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.105263
11	93799565	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.08
11	93799570	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.0714286
11	93799655	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.133333
11	93799696	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.133333
11	93802203	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.133333
11	93805382	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.142857
11	93805434	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.285714
11	93805460	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.368421
11	93805520	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.25
11	93806056	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.105263
11	93806061	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.105263
11	93806062	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.105263
11	95217031	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.181818
12	10216115	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0740741
12	10216161	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.333333
12	10216296	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.105263
12	10216774	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.166667
12	11661045	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.105263
12	11709440	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.181818
12	11833543	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.185185
12	12360287	A->G	+	ENSG00000165714	BORCS5	protein_coding	Intergenic	.	.	Alu	0.2
12	12553008	A->G	-	ENSG00000111266	DUSP16	protein_coding	Intergenic	.	.	Alu	0.2
12	12553012	A->G	-	ENSG00000111266	DUSP16	protein_coding	Intergenic	.	.	Alu	0.363636
12	12553013	A->G	-	ENSG00000111266	DUSP16	protein_coding	Intergenic	.	.	Alu	0.181818
12	12555958	A->G	-	ENSG00000111266	DUSP16	protein_coding	Intergenic	.	.	Alu	0.272727
12	12556027	A->G	-	ENSG00000111266	DUSP16	protein_coding	Intergenic	.	.	Alu	0.166667
12	14959201	A->G	-	ENSG00000111348	ARHGDIB	protein_coding	Intergenic	.	.	Alu	0.111111
12	21649889	A->G	-	ENSG00000111716	LDHB	protein_coding	Intergenic	.	.	Alu	0.285714
12	25082502	A->G	+	ENSG00000118308	LRMP	protein_coding	Intergenic	.	.	Alu	0.2
12	25082520	A->G	+	ENSG00000118308	LRMP	protein_coding	Intergenic	.	.	Alu	0.2
12	25212807	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.125
12	25212847	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.375
12	25216407	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.166667
12	25216413	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.333333
12	25217808	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.2
12	25219211	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.142857
12	25221318	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.142857
12	25221397	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.357143
12	25221437	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.388889
12	25221438	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.166667
12	25221461	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.266667
12	25221466	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.285714
12	25222027	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.142857
12	25222037	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.214286
12	25229994	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.315789
12	25230001	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.4
12	25230030	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.08
12	25248111	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.0769231
12	25248226	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.3
12	25248244	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.111111
12	26977691	A->G	-	ENSG00000247903	AC024896.1	antisense	Intergenic	.	.	Alu	0.2
12	27034516	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.285714
12	27034559	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.285714
12	27034606	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.133333
12	27034703	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.3
12	27034965	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.5
12	27035014	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.1
12	27035081	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.733333
12	27035125	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.214286
12	28407047	A->G	+	ENSG00000123106	CCDC91	protein_coding	Intergenic	.	.	Alu	0.3
12	31445453	A->G	-	ENSG00000170456	DENND5B	protein_coding	Intergenic	.	.	Alu	0.3
12	31965112	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.153846
12	31965771	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.142857
12	31965776	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.2
12	31976469	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.307692
12	31976474	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.2
12	31993248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
12	31993250	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
12	31993666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
12	31993696	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
12	31993724	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
12	31993767	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31994389	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31994395	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
12	31994447	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
12	31994455	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
12	31994468	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
12	31994477	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31994478	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
12	31994603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31994630	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31995246	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31995743	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
12	31996587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
12	31996618	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
12	31996621	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31997149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31997164	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31997195	A->G	+	.	.	.	Intergenic	.	.	Alu	0.470588
12	31997197	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
12	31997213	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
12	31997214	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
12	31997254	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
12	31997263	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
12	31997361	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
12	31997381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31997805	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31997811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31997838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31998569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
12	31998596	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31998605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
12	31998615	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31998631	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
12	31998650	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
12	31998666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
12	31998668	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
12	31999334	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
12	31999727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
12	31999787	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
12	32000013	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
12	32000019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
12	32714733	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.2
12	32714804	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.454545
12	32714805	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.5
12	32715702	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.181818
12	32718347	A->G	+	ENSG00000087470	DNM1L	protein_coding	Intergenic	.	.	Alu	0.2
12	34030024	A->G	+	ENSG00000245482	AC046130.1	antisense	Intergenic	.	.	Alu	0.181818
12	34030033	A->G	+	ENSG00000245482	AC046130.1	antisense	Intergenic	.	.	Alu	0.166667
12	42214544	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.111111
12	42214551	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.1875
12	42214553	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.133333
12	42214742	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.0909091
12	42214833	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.133333
12	42214849	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.142857
12	42214920	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.285714
12	42214921	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.2
12	42214928	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.142857
12	42214957	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.125
12	42214966	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.142857
12	42215387	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.2
12	42215394	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.142857
12	42222528	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.357143
12	42222530	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.388889
12	42223046	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.1875
12	42223085	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.217391
12	42226417	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.0652174
12	42347633	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.142857
12	42347660	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.1875
12	42347665	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.133333
12	42348223	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.333333
12	42352694	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.16
12	42352695	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.2
12	42352701	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.64
12	42360098	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.0833333
12	42360551	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.111111
12	42360552	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.5
12	42360620	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.222222
12	42360621	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.277778
12	42360660	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.263158
12	42360661	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.125
12	42360678	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.214286
12	42360692	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.2
12	42360723	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.208333
12	42360754	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.185185
12	42360755	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.296296
12	42360767	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42376518	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.2
12	42376606	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.210526
12	42376680	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.166667
12	42376732	A->G	+	ENSG00000134283	PPHLN1	protein_coding	Intergenic	.	.	Alu	0.157895
12	43800955	A->G	-	ENSG00000151239	TWF1	protein_coding	Intergenic	.	.	Alu	0.125
12	43802028	A->G	-	ENSG00000151239	TWF1	protein_coding	Intergenic	.	.	Alu	0.133333
12	43802029	A->G	-	ENSG00000151239	TWF1	protein_coding	Intergenic	.	.	Alu	0.133333
12	45743386	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45743392	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.454545
12	45748171	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.133333
12	45748200	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.111111
12	45753777	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.25
12	45763207	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.181818
12	45776692	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.5
12	45776694	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45776695	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.166667
12	45784256	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.277778
12	45784273	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.133333
12	45822319	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.181818
12	45826639	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.133333
12	45842556	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.166667
12	45843550	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.181818
12	45843552	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45897988	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.166667
12	45897995	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.5
12	45897998	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.333333
12	45898060	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.2
12	45898066	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.133333
12	45901761	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.181818
12	45901762	A->G	+	ENSG00000189079	ARID2	protein_coding	Intergenic	.	.	Alu	0.272727
12	45940892	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.1
12	45940907	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.1
12	45940943	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.133333
12	46202140	A->G	-	ENSG00000111371	SLC38A1	protein_coding	Intergenic	.	.	Alu	0.0833333
12	46215442	A->G	-	ENSG00000111371	SLC38A1	protein_coding	Intergenic	.	.	Alu	0.181818
12	46215556	A->G	-	ENSG00000111371	SLC38A1	protein_coding	Intergenic	.	.	Alu	0.125
12	48155525	A->G	-	ENSG00000177981	ASB8	protein_coding	Intergenic	.	.	Alu	0.6
12	48155980	A->G	-	ENSG00000177981	ASB8	protein_coding	Intergenic	.	.	Alu	0.25
12	48155990	A->G	-	ENSG00000177981	ASB8	protein_coding	Intergenic	.	.	Alu	0.181818
12	48657685	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.357143
12	48658593	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.2
12	48665968	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0571429
12	48666079	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	48666114	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0740741
12	48666130	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0588235
12	48666131	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0540541
12	48666184	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	48666197	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.08
12	48666295	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.176471
12	48696968	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.214286
12	48696994	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.230769
12	48697006	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.105263
12	48697013	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.210526
12	48697016	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.25
12	48697038	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.2
12	48697631	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.5
12	48697653	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.333333
12	48697656	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.2
12	48697703	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.25
12	48702977	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.133333
12	48707559	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.307692
12	48714125	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.2
12	49813755	A->G	-	ENSG00000167566	NCKAP5L	protein_coding	Intergenic	.	.	Alu	0.181818
12	50147316	A->G	-	ENSG00000272368	AC074032.1	antisense	Intergenic	.	.	Alu	0.272727
12	50147317	A->G	-	ENSG00000272368	AC074032.1	antisense	Intergenic	.	.	Alu	0.181818
12	50148227	A->G	-	ENSG00000272368	AC074032.1	antisense	Intergenic	.	.	Alu	0.142857
12	50149777	A->G	-	ENSG00000272368	AC074032.1	antisense	Intergenic	.	.	Alu	0.5
12	50152507	A->G	-	ENSG00000272368	AC074032.1	antisense	Intergenic	.	.	Alu	0.166667
12	50161743	A->G	-	ENSG00000272368	AC074032.1	antisense	Intergenic	.	.	Alu	0.181818
12	50407625	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.2
12	50408933	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.2
12	50443345	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.266667
12	50443410	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.416667
12	50443420	A->G	+	ENSG00000161813	LARP4	protein_coding	Intergenic	.	.	Alu	0.153846
12	50513649	A->G	+	ENSG00000066084	DIP2B	protein_coding	Intergenic	.	.	Alu	0.272727
12	50524808	A->G	+	ENSG00000066084	DIP2B	protein_coding	Intergenic	.	.	Alu	0.285714
12	53026109	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.2
12	53028380	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.105263
12	53032195	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.166667
12	53174245	A->G	-	ENSG00000139631	CSAD	protein_coding	Intergenic	.	.	Alu	0.2
12	53177572	A->G	-	ENSG00000139631	CSAD	protein_coding	Intergenic	.	.	Alu	0.181818
12	53456276	A->G	+	ENSG00000257379	AC023509.1	processed_transcript	Intergenic	.	.	Alu	0.111111
12	53458171	A->G	+	ENSG00000257379	AC023509.1	processed_transcript	Intergenic	.	.	Alu	0.153846
12	53470505	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.2
12	53668919	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.3
12	53668937	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.153846
12	53671946	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.166667
12	53671954	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.181818
12	53672417	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.166667
12	53672425	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.5
12	53672464	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.181818
12	53674700	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.133333
12	53674701	A->G	-	ENSG00000135390	ATP5MC2	protein_coding	Intergenic	.	.	Alu	0.133333
12	54414722	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.166667
12	54414725	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.166667
12	54414735	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.166667
12	54414800	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.2
12	54415065	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.214286
12	54415147	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.1875
12	54416146	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.111111
12	54416155	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.307692
12	54416166	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.3
12	54416190	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.153846
12	55766936	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55775024	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55776370	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.133333
12	55778209	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.266667
12	55778219	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55778311	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.176471
12	55778316	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.157895
12	55778335	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.210526
12	55778350	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.0952381
12	55778411	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55778426	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.2
12	55778727	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.12
12	55778737	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.285714
12	55778777	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55778823	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	55781371	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.285714
12	55781425	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.277778
12	55781471	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.222222
12	55781472	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55781477	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.210526
12	55781792	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.333333
12	55781866	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.230769
12	55781870	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.416667
12	55781915	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.142857
12	55781919	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.214286
12	55781957	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.384615
12	55782679	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.684211
12	55782684	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55782735	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.133333
12	55782753	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.3125
12	55782791	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.153846
12	55782995	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.8
12	55782999	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.6
12	55783096	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.705882
12	55783097	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.352941
12	55783858	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.111111
12	55785716	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.384615
12	55787110	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.375
12	55787180	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.363636
12	55787191	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.25
12	55787194	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.1875
12	55788571	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	55788683	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	55801326	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.363636
12	55810332	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	55943550	A->G	+	ENSG00000065357	DGKA	protein_coding	Intergenic	.	.	Alu	0.230769
12	55949895	A->G	+	ENSG00000065357	DGKA	protein_coding	Intergenic	.	.	Alu	0.272727
12	56250395	A->G	-	ENSG00000139645	ANKRD52	protein_coding	Intergenic	.	.	Alu	0.166667
12	56280363	A->G	-	ENSG00000062485	CS	protein_coding	Intergenic	.	.	Alu	0.2
12	56297592	A->G	-	ENSG00000062485	CS	protein_coding	Intergenic	.	.	Alu	0.2
12	56297657	A->G	-	ENSG00000062485	CS	protein_coding	Intergenic	.	.	Alu	0.2
12	56607592	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.142857
12	56607652	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.136364
12	56607836	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.210526
12	56607837	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.157895
12	56608250	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.4
12	56608312	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.25
12	56608315	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.166667
12	56608604	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.166667
12	56609038	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.133333
12	56609084	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.142857
12	56620415	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.230769
12	56620417	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.333333
12	56620418	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.384615
12	56620419	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.153846
12	56620457	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.153846
12	56620495	A->G	-	ENSG00000076108	BAZ2A	protein_coding	Intergenic	.	.	Alu	0.153846
12	56640989	A->G	-	ENSG00000110955	ATP5F1B	protein_coding	Intergenic	.	.	Alu	0.2
12	56641008	A->G	-	ENSG00000110955	ATP5F1B	protein_coding	Intergenic	.	.	Alu	0.3
12	56641715	A->G	-	ENSG00000110955	ATP5F1B	protein_coding	Intergenic	.	.	Alu	0.181818
12	56685098	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.25
12	57429505	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	57429506	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	57539797	A->G	-	ENSG00000175203	DCTN2	protein_coding	Intergenic	.	.	Alu	0.181818
12	57542813	A->G	-	ENSG00000175203	DCTN2	protein_coding	Intergenic	.	.	Alu	0.181818
12	57544639	A->G	-	ENSG00000175203	DCTN2	protein_coding	Intergenic	.	.	Alu	0.181818
12	57544649	A->G	-	ENSG00000175203	DCTN2	protein_coding	Intergenic	.	.	Alu	0.454545
12	57544665	A->G	-	ENSG00000175203	DCTN2	protein_coding	Intergenic	.	.	Alu	0.2
12	62282267	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.142857
12	62283723	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.142857
12	62319084	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.136364
12	62319180	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.186047
12	62331938	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.136364
12	62333322	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.235294
12	62333360	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.2
12	62333392	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.142857
12	62333396	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.1875
12	62333406	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.2
12	62333412	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.133333
12	62333527	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0645161
12	62333539	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.115385
12	62333552	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.0689655
12	62388202	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.5
12	62388213	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.666667
12	62388274	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.142857
12	62388294	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.181818
12	62388338	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.5
12	62388407	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.111111
12	62388982	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.3125
12	62388994	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.117647
12	62389074	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.125
12	62476576	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.2
12	62476880	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.272727
12	62476889	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.384615
12	62476974	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.153846
12	62476977	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.133333
12	62477003	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.214286
12	62507908	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.307692
12	62507979	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.181818
12	62507993	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.181818
12	62509289	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.181818
12	62509317	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.363636
12	62509377	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.2
12	62518205	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.285714
12	62574562	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.2
12	66151442	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.2
12	66151443	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.2
12	66193959	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.125
12	66194142	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.0833333
12	66195677	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.769231
12	66195678	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.692308
12	66195716	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.2
12	66195723	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	66195759	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.25
12	66195760	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.25
12	66195762	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	66200867	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	67282627	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.4
12	67283322	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.277778
12	67283355	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.210526
12	67283369	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.142857
12	67283463	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.117647
12	67283489	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.117647
12	67283503	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.133333
12	67283511	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.133333
12	67289629	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.125
12	67290450	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	67292231	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.2
12	67311469	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.0882353
12	68613341	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.107143
12	68615432	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0645161
12	68615435	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.148148
12	68615436	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.107143
12	68615437	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.222222
12	68615438	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.16
12	68615442	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.173913
12	68615452	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0909091
12	68615539	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.222222
12	68615577	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.08
12	68616025	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68616038	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.190476
12	68616098	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68616516	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0833333
12	68616549	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0869565
12	68616708	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68616845	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0714286
12	68617795	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0434783
12	68617825	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0465116
12	68617828	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.047619
12	68617857	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0869565
12	68617864	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0869565
12	68617947	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0425532
12	68617998	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0416667
12	68618989	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0526316
12	68619020	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1
12	68619025	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.20339
12	68619041	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0526316
12	68619045	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0526316
12	68619052	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0363636
12	68619060	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.04
12	68619087	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.196721
12	68620234	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0606061
12	68620644	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0526316
12	68620664	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0512821
12	68620675	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0612245
12	68620736	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68620738	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0357143
12	68620777	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0612245
12	68620788	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0740741
12	68620808	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0357143
12	68620840	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.170213
12	68620862	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0555556
12	68622902	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.178571
12	68622911	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.16
12	68622916	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.28
12	68622927	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68622953	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.204545
12	68622963	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.222222
12	68622985	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0612245
12	68623789	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68625672	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.176471
12	68625775	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0645161
12	68625780	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0606061
12	68625801	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68625863	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68625872	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0952381
12	68629050	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0652174
12	68629056	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68629116	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0535714
12	68629120	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0655738
12	68629126	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0892857
12	68629128	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0545455
12	68629132	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0384615
12	68629169	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0545455
12	68629178	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68629179	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0816327
12	68629226	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0652174
12	68629231	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0638298
12	68630709	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0444444
12	68630745	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0338983
12	68630752	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0350877
12	68630822	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0625
12	68632323	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0952381
12	68632853	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.138889
12	68632870	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68635520	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.2
12	68636486	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1
12	68636528	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0714286
12	68636540	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0714286
12	68636614	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.09375
12	68636803	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.08
12	68636815	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68636837	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68638691	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.238095
12	68638760	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1
12	68638762	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.162791
12	68638800	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0857143
12	68638842	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68638845	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0645161
12	68638875	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0512821
12	68638895	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0714286
12	68638896	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.26087
12	68638923	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0434783
12	68638935	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0566038
12	68646360	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.08
12	68646370	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0689655
12	68646498	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68646519	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68646540	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68646549	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.105263
12	68646556	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68646562	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0952381
12	68647182	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.214286
12	68647192	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.190476
12	68647468	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.272727
12	68647473	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.583333
12	68647482	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68647483	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.307692
12	68647495	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.230769
12	68693434	A->G	+	ENSG00000111581	NUP107	protein_coding	Intergenic	.	.	Alu	0.2
12	68693453	A->G	+	ENSG00000111581	NUP107	protein_coding	Intergenic	.	.	Alu	0.181818
12	68693466	A->G	+	ENSG00000111581	NUP107	protein_coding	Intergenic	.	.	Alu	0.181818
12	68817573	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.181818
12	68817574	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	68817628	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68818032	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.5
12	68818033	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.333333
12	68821112	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.2
12	68821213	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.3
12	68821306	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.222222
12	68821616	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.571429
12	68821980	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.272727
12	69242966	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.125
12	69243035	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.181818
12	69243973	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.142857
12	69244036	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.222222
12	69245854	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.0555556
12	69246007	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.0909091
12	69246008	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.08
12	69255297	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.16
12	69255302	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.192308
12	69256102	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.7
12	69260851	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.272727
12	69260852	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.0588235
12	69504245	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.2
12	69504262	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.416667
12	69504922	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.4
12	69540142	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.181818
12	69546621	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.3
12	69546665	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.2
12	69547407	A->G	+	ENSG00000166225	FRS2	protein_coding	Intergenic	.	.	Alu	0.2
12	70284325	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.117647
12	70290725	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.5
12	71615755	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.2
12	71615764	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.3
12	71615791	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.3
12	71616102	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.545455
12	71616163	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.333333
12	71616210	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.375
12	71616258	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.375
12	71616261	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.133333
12	71657771	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.214286
12	71657841	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.133333
12	71657867	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
12	71657881	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	71658386	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.1
12	71658568	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.1
12	71775796	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.0869565
12	71846861	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.153846
12	71846873	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.166667
12	71846901	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.2
12	71846902	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.272727
12	71846926	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.166667
12	71846979	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.111111
12	71847485	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.380952
12	71847616	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.307692
12	71847627	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.166667
12	71850538	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.181818
12	71866633	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.142857
12	76076821	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.115385
12	76076831	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.2
12	76076844	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.3
12	76076893	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.538462
12	76079354	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.08
12	76079400	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.0571429
12	76079417	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.0555556
12	76079437	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.0555556
12	76079462	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.190476
12	76079467	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
12	76079799	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.166667
12	76079808	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.5
12	76079902	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.117647
12	76079919	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.12
12	76080435	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.24
12	76080506	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.333333
12	76080538	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.222222
12	76081427	A->G	-	ENSG00000187109	NAP1L1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	76396524	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.307692
12	76528816	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.285714
12	76549548	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76550958	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.35
12	76550962	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0952381
12	76551046	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.222222
12	76556694	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.243243
12	76556760	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.222222
12	76556764	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.176471
12	76556801	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.263158
12	76556802	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.263158
12	76556815	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.307692
12	76557480	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.357143
12	76557493	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.538462
12	76557530	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.117647
12	76557532	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.733333
12	79799273	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.545455
12	79818461	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.08
12	79818476	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.4
12	79818524	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.08
12	79819737	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.0833333
12	79819745	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.190476
12	79896431	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.2
12	79896606	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.214286
12	79909480	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.0740741
12	79909492	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.0952381
12	79909613	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.2
12	79909623	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.272727
12	79909677	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.25
12	79909698	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.181818
12	79909895	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.176471
12	79909896	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.1875
12	79909950	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.363636
12	79909951	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.583333
12	79909972	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.166667
12	79910235	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.105263
12	79910236	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.105263
12	79910250	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.266667
12	79910263	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.117647
12	79910275	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.125
12	79910307	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.272727
12	79923784	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.0952381
12	79923786	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.142857
12	79923808	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.428571
12	79923851	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.166667
12	79923877	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.4375
12	79923880	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.25
12	79923968	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.272727
12	79924013	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.25
12	79924521	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.166667
12	79926314	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.142857
12	79926437	A->G	-	ENSG00000058272	PPP1R12A	protein_coding	Intergenic	.	.	Alu	0.3
12	92090475	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.1875
12	92090528	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.230769
12	92091630	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.173913
12	92091631	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0869565
12	92093145	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.307692
12	92093985	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.181818
12	92094506	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.142857
12	92094536	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.133333
12	92094561	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.2
12	92098454	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.130435
12	92105035	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0606061
12	92105078	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.1
12	92109696	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0645161
12	92109732	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.285714
12	92111835	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.08
12	92111859	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0952381
12	92111883	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.5
12	92112769	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.157895
12	92127816	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.166667
12	92127949	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0740741
12	92127953	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0714286
12	92127961	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0909091
12	92127974	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.121951
12	92129365	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.1
12	92129400	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.166667
12	93382904	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.4
12	93386460	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.454545
12	93386501	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.461538
12	93386505	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.5
12	93386535	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.2
12	93416827	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.125
12	93416840	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.125
12	93418189	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.235294
12	93418264	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0882353
12	93427938	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0645161
12	93427983	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.09375
12	93428013	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0833333
12	93428079	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0645161
12	93428146	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.105263
12	93429213	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.166667
12	93434998	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.272727
12	93435543	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.269231
12	93435544	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.153846
12	93435550	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.111111
12	93436194	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.1
12	93436303	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.08
12	93436323	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.117647
12	93436330	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.136364
12	93436661	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.277778
12	93436734	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0952381
12	93436740	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.1
12	93437045	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.166667
12	93437353	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.266667
12	93437579	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.119048
12	93437580	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.119048
12	93437631	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.105263
12	93437634	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.1
12	93437713	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.142857
12	93439334	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.147059
12	93439348	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0967742
12	93439354	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.0952381
12	93439464	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.142857
12	95053019	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.214286
12	95056024	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	95056032	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	95056037	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	95056078	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.222222
12	95056138	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.117647
12	95056693	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.125
12	95056847	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.307692
12	95056896	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.157895
12	95056928	A->G	-	ENSG00000120798	NR2C1	protein_coding	Intergenic	.	.	Alu	0.307692
12	95236728	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.142857
12	95245751	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.125
12	95245846	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.166667
12	95263611	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.142857
12	95263616	A->G	+	ENSG00000028203	VEZT	protein_coding	Intergenic	.	.	Alu	0.142857
12	95477325	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.181818
12	95477343	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.153846
12	95481175	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.166667
12	95481178	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.333333
12	95481268	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.3
12	95481272	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.636364
12	95481274	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.583333
12	95481304	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.428571
12	95482932	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.4
12	95488290	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.166667
12	95490155	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.3
12	96201439	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.230769
12	96201492	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.1875
12	96214254	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.153846
12	96214280	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	96284605	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.181818
12	96284810	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96293238	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.352941
12	96305858	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.181818
12	96305968	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.1875
12	96306382	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.176471
12	96307678	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.227273
12	96326010	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.272727
12	96327648	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.133333
12	96329086	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.764706
12	96329091	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.25
12	96329156	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.235294
12	96329178	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.210526
12	96330487	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.258065
12	96330562	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.181818
12	96330599	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.210526
12	96331170	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.166667
12	96331171	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.166667
12	96357346	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.272727
12	96379989	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.230769
12	96386040	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.266667
12	96386431	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.3125
12	96386624	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.1875
12	96386651	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.272727
12	96390187	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96395102	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.153846
12	96395155	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.4
12	98596737	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.116071
12	98596776	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0657895
12	98596804	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0769231
12	98596860	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0535714
12	98596863	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0333333
12	98596908	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.084507
12	98596921	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0263158
12	98596940	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0898876
12	98596971	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0214286
13	19710900	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0512821
13	19710940	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.205882
13	19710958	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0625
13	19710975	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0714286
13	19711061	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0606061
13	19711087	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.314286
13	19711455	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0714286
13	19711466	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.16129
13	19711552	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.181818
13	19711720	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.111111
13	19711749	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.185185
13	19711803	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.12
13	19711839	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.272727
13	19714677	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0540541
13	19714688	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0555556
13	19714727	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0487805
13	19714768	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0384615
13	19715820	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.1
13	19715951	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.157895
13	19716973	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.153846
13	19717349	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0789474
13	19717362	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0526316
13	19717403	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0810811
13	19717409	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.166667
13	19717795	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0689655
13	19717796	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.137931
13	19717975	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.0526316
13	19747620	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.2
13	19840235	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.153846
13	19846805	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.181818
13	19964485	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.2
13	19964561	A->G	+	ENSG00000121741	ZMYM2	protein_coding	Intergenic	.	.	Alu	0.133333
13	20070761	A->G	+	ENSG00000237672	KRR1P1	processed_pseudogene	Intergenic	.	.	Alu	0.125
13	20792486	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.181818
13	20819411	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.307692
13	20819436	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.363636
13	20834511	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.2
13	20835120	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.142857
13	20839007	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.125
13	20839046	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.125
13	20839546	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.214286
13	20839580	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.125
13	20839839	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.0952381
13	20840286	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.333333
13	20840290	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.272727
13	20840297	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.181818
13	20840305	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.125
13	20840346	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.2
13	20840440	A->G	-	ENSG00000132953	XPO4	protein_coding	Intergenic	.	.	Alu	0.25
13	20998119	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.3
13	21020937	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.230769
13	21029952	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.166667
13	21029958	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.2
13	21031648	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.117647
13	21032392	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.25
13	21032541	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.266667
13	21032555	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.2
13	21040139	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.153846
13	21040279	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.214286
13	21040286	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.166667
13	21041251	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.166667
13	21044821	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.125
13	21045008	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.125
13	21051916	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.266667
13	21052589	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.117647
13	21052619	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.1875
13	21052638	A->G	-	ENSG00000150457	LATS2	protein_coding	Intergenic	.	.	Alu	0.153846
13	21145753	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.333333
13	21146118	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.25
13	21146133	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.111111
13	21393824	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.272727
13	21393832	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.25
13	21396781	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.214286
13	21400822	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.666667
13	21400848	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.2
13	21400849	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.133333
13	21401179	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.181818
13	21401184	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.272727
13	21442572	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.333333
13	21442575	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.153846
13	21442672	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.111111
13	21449828	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.2
13	21451035	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.111111
13	21451049	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.117647
13	21451953	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	Intergenic	.	.	Alu	0.384615
13	21497517	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.133333
13	21497610	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.272727
13	21497647	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.3
13	21497954	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.636364
13	21497962	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.166667
13	21498005	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.181818
13	21498006	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.181818
13	21499539	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.181818
13	21499549	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.272727
13	21499913	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.666667
13	21499916	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.117647
13	21536492	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
13	23370973	A->G	-	ENSG00000151835	SACS	protein_coding	Intergenic	.	.	Alu	0.153846
13	24423297	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
13	24423298	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
13	24423375	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
13	24423386	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
13	24423509	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	24423914	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
13	24424018	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
13	24435794	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	24436506	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
13	24436511	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
13	24438008	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
13	24438009	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
13	24438030	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
13	24438031	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	24448176	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
13	24509304	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
13	24510829	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
13	25262500	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.181818
13	25265633	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.153846
13	25265650	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.230769
13	25305361	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.0869565
13	25306382	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.142857
13	27651758	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.5
13	27651776	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.235294
13	27651832	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.25
13	27652669	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.307692
13	27652806	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.6
13	27652999	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.153846
13	27653000	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.692308
13	27653003	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.642857
13	27653016	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.142857
13	27653083	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.307692
13	27653086	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.2
13	27653140	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.117647
13	27653160	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.166667
13	27653161	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.222222
13	28096259	A->G	-	ENSG00000122025	FLT3	protein_coding	Intergenic	.	.	Alu	0.4
13	28140048	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28145595	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28149190	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28149209	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28149247	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.157895
13	28149745	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.285714
13	28149789	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.466667
13	28149826	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28154595	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28154656	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.363636
13	28154676	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28158865	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28159528	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28167559	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28181389	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28186768	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0606061
13	28186976	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28186986	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.128205
13	28187065	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0689655
13	28187071	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28187072	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.115385
13	28187107	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.148148
13	28187165	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.115385
13	28187166	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.24
13	28187175	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28187223	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28187309	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0625
13	28187743	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.28
13	28187793	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.272727
13	28187830	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.16
13	28187833	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.4
13	28187835	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28187860	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28187867	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28187891	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.4375
13	28187928	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.121212
13	28187929	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28187933	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.16129
13	28187955	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28187956	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.102564
13	28187968	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.157895
13	28187974	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28189396	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.4
13	28189441	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.315789
13	28189444	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28189526	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28189527	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28189528	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0833333
13	28189532	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.047619
13	28189533	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0714286
13	28189948	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28189966	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.318182
13	28190000	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28190007	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.4
13	28190008	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.4
13	28190291	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.307692
13	28190379	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28194535	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28194545	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28194585	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.235294
13	28194607	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3125
13	28194609	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.176471
13	28194611	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28194633	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.222222
13	28194634	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28194645	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.25
13	28194650	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.111111
13	28194653	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.368421
13	28194708	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0857143
13	28194717	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0810811
13	28194738	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.428571
13	28195146	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.35
13	28195247	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28195282	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.384615
13	28195323	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.230769
13	28195389	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.142857
13	28195635	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28195636	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.421053
13	28195665	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28195710	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28195719	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28195736	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.222222
13	28195759	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.105263
13	28195780	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.133333
13	28195811	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0909091
13	28197604	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.222222
13	28197634	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.363636
13	28197647	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.533333
13	28197695	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28197699	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.166667
13	28197754	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.181818
13	28197780	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28198044	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28198071	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.117647
13	28198072	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.125
13	28198096	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.333333
13	28201060	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.1
13	28201072	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.285714
13	28202836	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.384615
13	28205675	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.0714286
13	28231781	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.235294
13	28231836	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.15
13	28234214	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.3
13	28272831	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.08
13	28273395	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	30625575	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.3
13	30629271	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.166667
13	30629412	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.1875
13	30629991	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.272727
13	30629993	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.181818
13	30630077	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.181818
13	30630081	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.181818
13	30630094	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.4
13	30644118	A->G	+	ENSG00000132952	USPL1	protein_coding	Intergenic	.	.	Alu	0.285714
13	32328341	A->G	+	ENSG00000139618	BRCA2	protein_coding	Intergenic	.	.	Alu	0.153846
13	32525586	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.2
13	32525622	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.190476
13	32525623	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.2
13	32525638	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.333333
13	32525667	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.1
13	32664863	A->G	+	ENSG00000083642	PDS5B	protein_coding	Intergenic	.	.	Alu	0.2
13	40615469	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.25
13	40615470	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40634566	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.181818
13	40636139	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.117647
13	40645901	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.125
13	40646453	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40646454	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40646630	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.15
13	40646670	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.15
13	40646731	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.3
13	40654256	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.105263
13	40655092	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.1
13	40655153	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.533333
13	40655170	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.636364
13	40655192	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.4
13	40655228	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.4
13	40655267	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40655274	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40655287	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.25
13	40655303	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.5
13	40660830	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0769231
13	40660859	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	40661387	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.181818
13	40661461	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.4
13	40661485	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40661521	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40664018	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.173913
13	40664107	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.214286
13	40664110	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40664237	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.2
13	40913213	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
13	40913215	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
13	40913229	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	40930149	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
13	40937945	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.111111
13	40938083	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.176471
13	40946789	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0357143
13	40946879	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0571429
13	40946881	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0555556
13	40949587	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0606061
13	40951709	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.153846
13	40952392	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40978269	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0408163
13	40987554	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
13	40990663	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.105263
13	40991527	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.272727
13	40991528	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.272727
13	40991556	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.133333
13	40993595	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.115385
13	40994384	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0789474
13	40994386	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.179487
13	40994480	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.129032
13	40994520	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.047619
13	40994560	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0645161
13	40994617	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.333333
13	40997330	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	40997560	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0740741
13	40997671	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1
13	40997894	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	40997933	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0425532
13	40998095	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.323529
13	40998100	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.121212
13	40998111	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.1875
13	40998139	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.243243
13	40998825	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	40998899	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0961538
13	40998900	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.08
13	40998929	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0588235
13	41008997	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.05
13	41009007	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.15
13	41009008	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	41009256	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.228571
13	41010147	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	41010203	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	41010365	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0714286
13	41010368	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0689655
13	41011478	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.233333
13	41011552	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0810811
13	41011609	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0555556
13	41012072	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.290323
13	41012077	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.192308
13	41012169	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
13	41012196	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.28
13	41012201	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.458333
13	41012250	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.105263
13	41050659	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
13	41053294	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.266667
13	41053313	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.2
13	41058864	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	41058873	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.230769
13	41058910	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	41349203	A->G	+	ENSG00000172766	NAA16	protein_coding	Intergenic	.	.	Alu	0.181818
13	41349222	A->G	+	ENSG00000172766	NAA16	protein_coding	Intergenic	.	.	Alu	0.272727
13	45342327	A->G	+	ENSG00000170919	TPT1-AS1	processed_transcript	Intergenic	.	.	Alu	0.15
13	46036062	A->G	-	ENSG00000123200	ZC3H13	protein_coding	Intergenic	.	.	Alu	0.230769
13	46036064	A->G	-	ENSG00000123200	ZC3H13	protein_coding	Intergenic	.	.	Alu	0.230769
13	48239439	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.103448
13	48239453	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.147059
13	48239485	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.3125
13	48239535	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.125
13	48240305	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0666667
13	48240306	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.103448
13	48240345	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.166667
13	48240347	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.391304
13	48240351	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.44
13	48240388	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0645161
13	48240390	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.0666667
13	49028462	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.2
13	49547818	A->G	-	ENSG00000136144	RCBTB1	protein_coding	Intergenic	.	.	Alu	0.166667
13	49548280	A->G	-	ENSG00000136144	RCBTB1	protein_coding	Intergenic	.	.	Alu	0.2
13	49549011	A->G	-	ENSG00000136144	RCBTB1	protein_coding	Intergenic	.	.	Alu	0.166667
13	49549069	A->G	-	ENSG00000136144	RCBTB1	protein_coding	Intergenic	.	.	Alu	0.25
13	49549086	A->G	-	ENSG00000136144	RCBTB1	protein_coding	Intergenic	.	.	Alu	0.166667
13	50001246	A->G	+	ENSG00000204977	TRIM13	protein_coding	Intergenic	.	.	Alu	0.181818
13	50057040	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.125
13	50111048	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.153846
13	50113818	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.176471
13	50113833	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.1875
13	50113921	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.153846
13	52019428	A->G	+	ENSG00000253710	ALG11	protein_coding	Intergenic	.	.	Alu	0.363636
13	52019495	A->G	+	ENSG00000253710	ALG11	protein_coding	Intergenic	.	.	Alu	0.142857
13	52019853	A->G	+	ENSG00000253710	ALG11	protein_coding	Intergenic	.	.	Alu	0.2
13	52191374	A->G	-	ENSG00000243406	MRPS31P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.24
13	52191422	A->G	-	ENSG00000243406	MRPS31P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.08
13	52191432	A->G	-	ENSG00000243406	MRPS31P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3125
13	52191565	A->G	-	ENSG00000243406	MRPS31P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
13	52192845	A->G	-	ENSG00000243406	MRPS31P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
13	52462982	A->G	+	ENSG00000136108	CKAP2	protein_coding	Intergenic	.	.	Alu	0.166667
13	52463007	A->G	+	ENSG00000136108	CKAP2	protein_coding	Intergenic	.	.	Alu	0.166667
13	52628215	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.0952381
13	52628217	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.0909091
13	52628362	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.111111
13	52629807	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.230769
13	52629848	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.357143
13	52630531	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.230769
13	52630532	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.25
13	52630545	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.133333
13	72779268	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.142857
13	72780071	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.103448
13	72780177	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.214286
13	72780243	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.1
13	72780269	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.12
13	72780279	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.235294
13	73935053	A->G	-	ENSG00000118922	KLF12	protein_coding	Intergenic	.	.	Alu	0.25
13	74130545	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
13	77023319	A->G	-	ENSG00000005812	FBXL3	protein_coding	Intergenic	.	.	Alu	0.0697674
13	77107581	A->G	-	ENSG00000283208	AC001226.2	protein_coding	Intergenic	.	.	Alu	0.117647
13	77107626	A->G	-	ENSG00000283208	AC001226.2	protein_coding	Intergenic	.	.	Alu	0.0952381
13	77107643	A->G	-	ENSG00000283208	AC001226.2	protein_coding	Intergenic	.	.	Alu	0.136364
13	77108824	A->G	-	ENSG00000283208	AC001226.2	protein_coding	Intergenic	.	.	Alu	0.181818
13	79394838	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.181818
13	79394852	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.25
13	79394853	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.181818
13	79395522	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.266667
13	79395551	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.111111
13	79395552	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.444444
13	79395619	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.421053
13	79395731	A->G	-	ENSG00000139746	RBM26	protein_coding	Intergenic	.	.	Alu	0.769231
13	95715556	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.2
13	95715562	A->G	+	ENSG00000102580	DNAJC3	protein_coding	Intergenic	.	.	Alu	0.272727
13	98517391	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.15
13	98517530	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.157895
13	98547295	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.181818
13	98568601	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.1875
13	99530171	A->G	+	ENSG00000125304	TM9SF2	protein_coding	Intergenic	.	.	Alu	0.25
13	99531000	A->G	+	ENSG00000125304	TM9SF2	protein_coding	Intergenic	.	.	Alu	0.363636
13	99532312	A->G	+	ENSG00000125304	TM9SF2	protein_coding	Intergenic	.	.	Alu	0.363636
13	99532435	A->G	+	ENSG00000125304	TM9SF2	protein_coding	Intergenic	.	.	Alu	0.142857
13	99544168	A->G	+	ENSG00000125304	TM9SF2	protein_coding	Intergenic	.	.	Alu	0.615385
13	99544173	A->G	+	ENSG00000125304	TM9SF2	protein_coding	Intergenic	.	.	Alu	0.153846
14	20478112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	20478149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
14	20478184	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
14	20478238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
14	20478285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
14	20478301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
14	20478315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
14	20480320	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	20480405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
14	20480406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
14	20480502	A->G	+	.	.	.	Intergenic	.	.	Alu	0.411765
14	20480856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
14	20480889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
14	20480894	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
14	20480895	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
14	20480963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	20480989	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	20481007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
14	20481047	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
14	20481048	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
14	20481103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16
14	21232494	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.166667
14	21244164	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.133333
14	21244199	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.181818
14	21244295	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.133333
14	21245943	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1
14	21245951	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0952381
14	21245990	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.111111
14	21246047	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.136364
14	21246096	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.15
14	21246097	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1
14	21246370	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.263158
14	21248120	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0526316
14	21248121	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.102564
14	21252408	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0952381
14	21252419	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.222222
14	21252448	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.3
14	21252449	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1
14	21252585	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.130435
14	21252586	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.25
14	21253074	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0869565
14	21253117	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0869565
14	21254782	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.1875
14	21256340	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0882353
14	21256363	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0512821
14	21256366	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0714286
14	21256747	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0555556
14	21256752	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0434783
14	21257691	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0851064
14	21257723	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0408163
14	21257810	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0454545
14	21261071	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0697674
14	21261094	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0571429
14	21261101	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0857143
14	21265721	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.04
14	21265737	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.219512
14	21265756	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0571429
14	21265764	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.263158
14	21266371	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.133333
14	21471399	A->G	-	ENSG00000129472	RAB2B	protein_coding	Intergenic	.	.	Alu	0.111111
14	21471414	A->G	-	ENSG00000129472	RAB2B	protein_coding	Intergenic	.	.	Alu	0.117647
14	21471425	A->G	-	ENSG00000129472	RAB2B	protein_coding	Intergenic	.	.	Alu	0.1875
14	21471496	A->G	-	ENSG00000129472	RAB2B	protein_coding	Intergenic	.	.	Alu	0.615385
14	21471506	A->G	-	ENSG00000129472	RAB2B	protein_coding	Intergenic	.	.	Alu	0.153846
14	21471523	A->G	-	ENSG00000129472	RAB2B	protein_coding	Intergenic	.	.	Alu	0.5
14	21471532	A->G	-	ENSG00000129472	RAB2B	protein_coding	Intergenic	.	.	Alu	0.272727
14	21480014	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.166667
14	21480016	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.166667
14	21480956	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.5
14	21481362	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.111111
14	21481389	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.285714
14	21481399	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.291667
14	21481413	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.142857
14	21481414	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.428571
14	21481453	A->G	+	ENSG00000092203	TOX4	protein_coding	Intergenic	.	.	Alu	0.0714286
14	21500091	A->G	+	ENSG00000165819	METTL3	protein_coding	Intergenic	.	.	Alu	0.166667
14	21502137	A->G	+	ENSG00000165819	METTL3	protein_coding	Intergenic	.	.	Alu	0.181818
14	22915974	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.117647
14	22916049	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.3
14	22916050	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.2
14	23074119	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.181818
14	23074309	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.173913
14	23074331	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.0952381
14	23074383	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.333333
14	23074402	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.263158
14	23074403	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.222222
14	23074465	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.428571
14	23074478	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.230769
14	23074508	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.642857
14	23074551	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.133333
14	23084219	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.2
14	23084220	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.4
14	23084226	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.454545
14	23084344	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.2
14	23084350	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.454545
14	23085099	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.166667
14	23091351	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.111111
14	23091355	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.117647
14	23091381	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.411765
14	24168891	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
14	24168892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
14	24168902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
14	24169031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
14	24169190	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
14	24169901	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
14	24169934	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
14	24169952	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	24170125	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
14	24170868	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	24435208	A->G	+	ENSG00000100441	KHNYN	protein_coding	Intergenic	.	.	Alu	0.5
14	30654441	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.181818
14	30655866	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.0769231
14	30658576	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.142857
14	30658598	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.142857
14	30658645	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.142857
14	30681086	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.166667
14	30684272	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.166667
14	30684275	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.333333
14	30694411	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.125
14	30694417	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.111111
14	30694490	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.1875
14	30694501	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.125
14	30694551	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.272727
14	30704237	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.166667
14	30704291	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.166667
14	30704307	A->G	+	ENSG00000092108	SCFD1	protein_coding	Intergenic	.	.	Alu	0.166667
14	31006917	A->G	-	ENSG00000196792	STRN3	protein_coding	Intergenic	.	.	Alu	0.3
14	31191275	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.4
14	31196151	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.3
14	31196152	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.2
14	31196250	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.181818
14	31200668	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.181818
14	31200740	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.333333
14	34530467	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.142857
14	34533277	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.153846
14	34533314	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.2
14	34567230	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.2
14	34580063	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.3
14	34583534	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.133333
14	34608771	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.166667
14	34608777	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.25
14	34616508	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.636364
14	34616645	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.181818
14	34617460	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.181818
14	34621184	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.181818
14	34621192	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.4
14	34622096	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.3
14	34788269	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.153846
14	34790865	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.117647
14	34790868	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.166667
14	34791083	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.133333
14	34791115	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.230769
14	34791117	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.571429
14	34856408	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.111111
14	34856422	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.133333
14	34863962	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.125
14	34865232	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.3
14	35001991	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.166667
14	35002980	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.111111
14	35002981	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.210526
14	35003008	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.142857
14	35003014	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.208333
14	35003020	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.166667
14	35005131	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.2
14	35005212	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.75
14	35005242	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.363636
14	35005259	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.666667
14	35005579	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.5
14	35005606	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.181818
14	35005616	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.583333
14	35021326	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.5
14	35021446	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.5
14	35021486	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.181818
14	35022629	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.230769
14	35025936	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.333333
14	35025958	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.2
14	35026240	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.75
14	35026242	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.363636
14	35026244	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.545455
14	35026307	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.263158
14	35026321	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.470588
14	35026322	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.411765
14	35026339	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.2
14	35026362	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.428571
14	35026443	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.2
14	35027204	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.2
14	35027230	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.384615
14	35027298	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.642857
14	35049100	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.285714
14	35049113	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.117647
14	35049520	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.214286
14	35052799	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.181818
14	35094233	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.166667
14	35094263	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.153846
14	35096979	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.25
14	35116344	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.166667
14	35116376	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.0952381
14	35116454	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.25
14	35116521	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.2
14	35116550	A->G	-	ENSG00000092020	PPP2R3C	protein_coding	Intergenic	.	.	Alu	0.214286
14	35720871	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.2
14	39184852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
14	39185079	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
14	39324724	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.363636
14	39324736	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.7
14	39324816	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.2
14	39324841	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.272727
14	39325641	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.416667
14	39325643	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.25
14	39325775	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.4
14	39325840	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.214286
14	39325843	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.5
14	39427696	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.25
14	39427832	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.3125
14	39427938	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.375
14	39427942	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.1875
14	39428302	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.117647
14	39428343	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.117647
14	39428424	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.125
14	39428456	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.0952381
14	44943610	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.2
14	44943813	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.25
14	45206504	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.263158
14	45207422	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.185185
14	45207468	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.4
14	45207471	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.166667
14	45207569	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.111111
14	45217396	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.153846
14	45217403	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.153846
14	45240174	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intergenic	.	.	Alu	0.5
14	49584256	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.129032
14	49584655	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.111111
14	49584664	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.25
14	49585258	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.0952381
14	49804224	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.2
14	49817357	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.3
14	49819710	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.2
14	49820506	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.105263
14	49820819	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.25
14	49823231	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.181818
14	49825484	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.166667
14	49825519	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.153846
14	49825700	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.181818
14	49832559	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.181818
14	49834762	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.363636
14	49834936	A->G	-	ENSG00000165525	NEMF	protein_coding	Intergenic	.	.	Alu	0.272727
14	50112884	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.5
14	50112899	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.166667
14	50112925	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.25
14	50112965	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.153846
14	50112970	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.181818
14	50113058	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.176471
14	50113059	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.117647
14	50114812	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.25
14	50114817	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.181818
14	50170475	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.3
14	50187578	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.166667
14	50187591	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.181818
14	50191220	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50193280	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.125
14	50193946	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.142857
14	50196910	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.130435
14	50196946	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.321429
14	50196970	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0833333
14	50198974	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.142857
14	50198999	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.111111
14	50199031	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.125
14	50199037	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.0833333
14	50199070	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.241379
14	50199071	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.142857
14	50202145	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.176471
14	50202186	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.181818
14	50221770	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.272727
14	50225222	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.166667
14	50484056	A->G	-	ENSG00000012983	MAP4K5	protein_coding	Intergenic	.	.	Alu	0.105263
14	50484057	A->G	-	ENSG00000012983	MAP4K5	protein_coding	Intergenic	.	.	Alu	0.111111
14	50725617	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.151515
14	50725659	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.444444
14	50799737	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.133333
14	50799747	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.181818
14	50803270	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.181818
14	50810435	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.2
14	50817800	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.153846
14	50817801	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.166667
14	50817853	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.384615
14	50817895	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.615385
14	50817909	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.3
14	51901376	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.461538
14	51901445	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.117647
14	51901456	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.105263
14	51917781	A->G	+	ENSG00000258928	AL358333.2	antisense	Intergenic	.	.	Alu	0.125
14	51917861	A->G	+	ENSG00000258928	AL358333.2	antisense	Intergenic	.	.	Alu	0.333333
14	51917865	A->G	+	ENSG00000258928	AL358333.2	antisense	Intergenic	.	.	Alu	0.166667
14	51918878	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.166667
14	51918894	A->G	+	ENSG00000186469	GNG2	protein_coding	Intergenic	.	.	Alu	0.333333
14	52712674	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.230769
14	52712692	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.8
14	52712697	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.125
14	52712709	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.125
14	52712817	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.923077
14	52712892	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.416667
14	52713049	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.466667
14	52713071	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.230769
14	52713072	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.307692
14	52714763	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.125
14	52717873	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.384615
14	52717874	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.230769
14	52717908	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.1875
14	52717947	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.461538
14	54863913	A->G	-	ENSG00000131979	GCH1	protein_coding	Intergenic	.	.	Alu	0.142857
14	54863950	A->G	-	ENSG00000131979	GCH1	protein_coding	Intergenic	.	.	Alu	0.363636
14	54863951	A->G	-	ENSG00000131979	GCH1	protein_coding	Intergenic	.	.	Alu	0.272727
14	55055154	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.119048
14	55055168	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0967742
14	55055219	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0571429
14	55055675	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.153846
14	55055755	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.176471
14	55055807	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55056639	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.117647
14	55057635	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.1
14	55057705	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0740741
14	55057706	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.103448
14	55060879	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.138889
14	55060881	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.285714
14	55060882	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.111111
14	55060908	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0967742
14	55060956	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.173913
14	55061029	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.130435
14	55061060	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.105263
14	55061070	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.176471
14	55284016	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55284042	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55284132	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.3
14	55284755	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.461538
14	55284757	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55284777	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.4375
14	55284825	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55289762	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.133333
14	55291652	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.111111
14	55291716	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55291737	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55291780	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.105263
14	55291827	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55292453	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.166667
14	55292499	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.111111
14	55292590	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.105263
14	55378963	A->G	-	ENSG00000126775	ATG14	protein_coding	Intergenic	.	.	Alu	0.5
14	55393606	A->G	-	ENSG00000126775	ATG14	protein_coding	Intergenic	.	.	Alu	0.166667
14	55393611	A->G	-	ENSG00000126775	ATG14	protein_coding	Intergenic	.	.	Alu	0.25
14	55393696	A->G	-	ENSG00000126775	ATG14	protein_coding	Intergenic	.	.	Alu	0.4
14	55393729	A->G	-	ENSG00000126775	ATG14	protein_coding	Intergenic	.	.	Alu	0.230769
14	55393821	A->G	-	ENSG00000126775	ATG14	protein_coding	Intergenic	.	.	Alu	0.333333
14	55394280	A->G	-	ENSG00000126775	ATG14	protein_coding	Intergenic	.	.	Alu	0.307692
14	55584397	A->G	+	ENSG00000126777	KTN1	protein_coding	Intergenic	.	.	Alu	0.5
14	55584646	A->G	+	ENSG00000126777	KTN1	protein_coding	Intergenic	.	.	Alu	0.333333
14	55584673	A->G	+	ENSG00000126777	KTN1	protein_coding	Intergenic	.	.	Alu	0.214286
14	56225118	A->G	+	ENSG00000139946	PELI2	protein_coding	Intergenic	.	.	Alu	0.538462
14	58228433	A->G	+	ENSG00000131966	ACTR10	protein_coding	Intergenic	.	.	Alu	0.285714
14	58274766	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.133333
14	58274776	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.1875
14	58277980	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.130435
14	58278006	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.0952381
14	58278050	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.4
14	58290845	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.611111
14	58291413	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.181818
14	58291414	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.181818
14	58291435	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.272727
14	58292689	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.142857
14	58309216	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.130435
14	58314565	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.4
14	58314697	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.2
14	58314869	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.25
14	58314924	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.166667
14	58327847	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.181818
14	58362333	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.2
14	58362810	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.133333
14	58362832	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.352941
14	58363539	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.153846
14	58363589	A->G	+	ENSG00000032219	ARID4A	protein_coding	Intergenic	.	.	Alu	0.142857
14	60256345	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.176471
14	60256383	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0952381
14	60263107	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0833333
14	60263162	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.136364
14	60273852	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.5
14	60273902	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.222222
14	60275504	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.137931
14	60275523	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.130435
14	60275626	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0512821
14	60275724	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0526316
14	60275733	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.0526316
14	61328901	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.4
14	61328941	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.3
14	61329488	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.384615
14	61329497	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.181818
14	61336949	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.2
14	61336971	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.166667
14	61336975	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.142857
14	61336990	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.333333
14	61337243	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.3
14	61337244	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.2
14	61337550	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.0952381
14	61337635	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.25
14	61337687	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.136364
14	61337688	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.318182
14	61337689	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.136364
14	61337701	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.08
14	61364135	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.153846
14	61364156	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.222222
14	61382167	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.142857
14	61382310	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.166667
14	61486782	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.636364
14	61490782	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.214286
14	61738849	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.0307692
14	61743256	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.2
14	64516062	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.142857
14	64516068	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.142857
14	64519525	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.142857
14	64519698	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.181818
14	65066692	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.166667
14	65066738	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.133333
14	65066799	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.133333
14	65066802	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.2
14	65067077	A->G	-	ENSG00000125952	MAX	protein_coding	Intergenic	.	.	Alu	0.153846
14	67592853	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.214286
14	67592871	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.214286
14	67592882	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.2
14	67592883	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.181818
14	67592897	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.2
14	67592965	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.166667
14	67592966	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.75
14	67592969	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.615385
14	67593060	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.363636
14	67593233	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.136364
14	67593238	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.130435
14	67593245	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.1
14	67662093	A->G	-	ENSG00000100568	VTI1B	protein_coding	Intergenic	.	.	Alu	0.2
14	67665540	A->G	-	ENSG00000100568	VTI1B	protein_coding	Intergenic	.	.	Alu	0.2
14	67669299	A->G	-	ENSG00000100568	VTI1B	protein_coding	Intergenic	.	.	Alu	0.25
14	67669300	A->G	-	ENSG00000100568	VTI1B	protein_coding	Intergenic	.	.	Alu	0.166667
14	67669394	A->G	-	ENSG00000100568	VTI1B	protein_coding	Intergenic	.	.	Alu	0.2
14	67670600	A->G	-	ENSG00000100568	VTI1B	protein_coding	Intergenic	.	.	Alu	0.153846
14	69110625	A->G	-	ENSG00000139990	DCAF5	protein_coding	Intergenic	.	.	Alu	0.5
14	69145221	A->G	-	ENSG00000139990	DCAF5	protein_coding	Intergenic	.	.	Alu	0.181818
14	69145222	A->G	-	ENSG00000139990	DCAF5	protein_coding	Intergenic	.	.	Alu	0.25
14	70920562	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.0789474
14	70921414	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.225806
14	70921433	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.0769231
14	70924072	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.142857
14	70924182	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.117647
14	70925032	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.2
14	70925058	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.363636
14	70925241	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.222222
14	70925251	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.117647
14	70935338	A->G	+	ENSG00000100731	PCNX1	protein_coding	Intergenic	.	.	Alu	0.333333
14	71357857	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.181818
14	71359344	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.384615
14	71399482	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.117647
14	73020143	A->G	-	ENSG00000165861	ZFYVE1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73086350	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.25
14	73086388	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.4
14	73086728	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.142857
14	73086774	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.266667
14	73086808	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.133333
14	73086879	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.230769
14	73091449	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.142857
14	73091466	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
14	73091475	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.153846
14	73093571	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.133333
14	73098000	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.153846
14	73098340	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.222222
14	73098366	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.176471
14	73118563	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.333333
14	73143757	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.105263
14	73143758	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.111111
14	73143827	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.5
14	73143830	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.7
14	73145553	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.692308
14	73145557	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.142857
14	73145577	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.117647
14	73145614	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.2
14	73145986	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73146026	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.142857
14	73146028	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73146069	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.375
14	73146327	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73146370	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.166667
14	73901868	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.142857
14	73901880	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.230769
14	73906662	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73907721	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.133333
14	73925528	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.3
14	73925822	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.3
14	73925830	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.3
14	73928710	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73930836	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.166667
14	74088195	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.3
14	74088458	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.166667
14	74088485	A->G	+	ENSG00000205659	LIN52	protein_coding	Intergenic	.	.	Alu	0.4
14	74689991	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.4
14	74694745	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.2
14	74695257	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.1875
14	74695259	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.3125
14	74695283	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.235294
14	74695298	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.142857
14	74697881	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.3
14	74697903	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.333333
14	74697913	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.1875
14	74697937	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.235294
14	74698374	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.136364
14	74698384	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.2
14	74833361	A->G	+	ENSG00000119596	YLPM1	protein_coding	Intergenic	.	.	Alu	0.181818
14	74894685	A->G	+	ENSG00000119689	DLST	protein_coding	Intergenic	.	.	Alu	0.1
14	74894687	A->G	+	ENSG00000119689	DLST	protein_coding	Intergenic	.	.	Alu	0.176471
14	74895032	A->G	+	ENSG00000119689	DLST	protein_coding	Intergenic	.	.	Alu	0.166667
14	74895065	A->G	+	ENSG00000119689	DLST	protein_coding	Intergenic	.	.	Alu	0.333333
14	74895556	A->G	+	ENSG00000119689	DLST	protein_coding	Intergenic	.	.	Alu	0.2
14	74895577	A->G	+	ENSG00000119689	DLST	protein_coding	Intergenic	.	.	Alu	0.166667
14	77535199	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.333333
14	77535200	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.214286
14	77535206	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.2
14	77726557	A->G	-	ENSG00000119705	SLIRP	protein_coding	Intergenic	.	.	Alu	0.272727
14	77726575	A->G	-	ENSG00000119705	SLIRP	protein_coding	Intergenic	.	.	Alu	0.2
14	77726576	A->G	-	ENSG00000119705	SLIRP	protein_coding	Intergenic	.	.	Alu	0.3
14	88574956	A->G	+	ENSG00000100722	ZC3H14	protein_coding	Intergenic	.	.	Alu	0.2
14	89407707	A->G	-	ENSG00000258380	AL356805.1	antisense	Intergenic	.	.	Alu	0.166667
14	89407763	A->G	-	ENSG00000258380	AL356805.1	antisense	Intergenic	.	.	Alu	0.2
14	89554364	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.166667
14	89564972	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.2
14	89591690	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.153846
14	89591809	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.3
14	89593834	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.117647
14	89593857	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.153846
14	89593858	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.166667
14	89594777	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.0833333
14	89594804	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.2
14	89598528	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.125
14	89605855	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.272727
14	89609367	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.153846
14	89609380	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.125
14	89609382	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.125
14	89609385	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.125
14	89609406	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.166667
14	89609407	A->G	-	ENSG00000259053	AL137230.2	processed_transcript	Intergenic	.	.	Alu	0.166667
14	91463659	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.166667
14	91468545	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91468583	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91468586	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.133333
14	91469709	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.133333
14	91479121	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0681818
14	91479143	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0444444
14	91479147	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.104167
14	91479601	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.117647
14	91479679	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0769231
14	91479885	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.111111
14	91480801	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.172414
14	91480806	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0689655
14	91480919	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0833333
14	91481210	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.1
14	91481246	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0952381
14	91495875	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.230769
14	91499000	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91499013	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.230769
14	91502350	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.15
14	91502374	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.3125
14	91502417	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.473684
14	91503080	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0909091
14	91503098	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.291667
14	91503132	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.105263
14	91505287	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91506653	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.166667
14	91506689	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.136364
14	91506825	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91507068	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.1875
14	91507139	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.25
14	92090052	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92090339	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.153846
14	92091206	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.166667
14	92091883	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92103496	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92103501	A->G	-	ENSG00000066427	ATXN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92661636	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92662950	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92663085	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.2
14	93216235	A->G	+	ENSG00000012963	UBR7	protein_coding	Intergenic	.	.	Alu	0.166667
14	93216255	A->G	+	ENSG00000012963	UBR7	protein_coding	Intergenic	.	.	Alu	0.2
14	93216281	A->G	+	ENSG00000012963	UBR7	protein_coding	Intergenic	.	.	Alu	0.2
14	94053754	A->G	-	ENSG00000089737	DDX24	protein_coding	Intergenic	.	.	Alu	0.0930233
14	94053768	A->G	-	ENSG00000089737	DDX24	protein_coding	Intergenic	.	.	Alu	0.0571429
14	95448436	A->G	-	ENSG00000176438	SYNE3	protein_coding	Intergenic	.	.	Alu	0.25
14	96525631	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.230769
14	96529643	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.2
14	96529671	A->G	+	ENSG00000090060	PAPOLA	protein_coding	Intergenic	.	.	Alu	0.0740741
15	21017647	A->G	+	.	.	.	Intergenic	.	.	Alu	1
15	21017696	A->G	+	.	.	.	Intergenic	.	.	Alu	1
15	22842653	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.2
15	22843319	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.166667
15	22846603	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.3
15	22847086	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.3
15	22847564	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.25
15	22847565	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.166667
15	22850030	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.727273
15	23007165	A->G	-	ENSG00000275835	TUBGCP5	protein_coding	Intergenic	.	.	Alu	0.2
15	23007214	A->G	-	ENSG00000275835	TUBGCP5	protein_coding	Intergenic	.	.	Alu	0.8
15	24963339	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.181818
15	24963388	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.259259
15	24963405	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.393939
15	24963429	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.166667
15	24963459	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0833333
15	24963468	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.130435
15	24963784	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0689655
15	24963825	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.151515
15	24963853	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.444444
15	24963870	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.483871
15	24963921	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.15
15	24963935	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0869565
15	24964007	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.258065
15	24964335	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.142857
15	24964337	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.1
15	24964410	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.25
15	24964419	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.153846
15	24964422	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.375
15	24964432	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.153846
15	24964445	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.181818
15	24964474	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.214286
15	24964477	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.5
15	24964483	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.285714
15	24964515	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.5625
15	24964516	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.6
15	24964560	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.15
15	24964566	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.545455
15	24964581	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.6
15	24965282	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.125
15	24965328	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.3
15	24965403	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.266667
15	24967453	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.105263
15	24967469	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0869565
15	24967475	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.107143
15	24969363	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0740741
15	24970325	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.3
15	24970365	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.2
15	24970385	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.25
15	24970420	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0869565
15	24970442	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0952381
15	24970459	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.25
15	24970468	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0952381
15	24970485	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.190476
15	24970505	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.117647
15	24973111	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.142857
15	24973123	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0952381
15	24973136	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.142857
15	24973150	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0833333
15	24973467	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.2
15	25361396	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	25416096	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	1
15	25422982	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.05
15	25426086	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.53125
15	25426884	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.204545
15	25426891	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0666667
15	25426895	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0666667
15	25426915	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0909091
15	25426986	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0967742
15	25427708	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.1875
15	25429631	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.285714
15	25429632	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.075
15	25429656	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.333333
15	25429663	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.464286
15	25429682	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0740741
15	25429757	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.12
15	25429769	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.296296
15	25429770	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.222222
15	25429794	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0714286
15	25429800	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0769231
15	25429801	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.153846
15	25429802	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.384615
15	25431403	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	25431432	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.142857
15	25431440	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	25431491	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.117647
15	25431513	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	25431516	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0909091
15	25431521	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.1
15	25431544	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.235294
15	25431561	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.117647
15	25431616	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	25431652	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.130435
15	25433252	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0769231
15	25433353	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.12
15	25433389	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.1
15	25433825	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.325
15	25433832	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.153846
15	25433864	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.125
15	25433943	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.733333
15	25433945	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.233333
15	25433948	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.451613
15	25433958	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0967742
15	25434010	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.190476
15	25434320	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0487805
15	25434322	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.097561
15	25436497	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.0882353
15	25436668	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.571429
15	25436669	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.428571
15	25436673	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.272727
15	25436732	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.846154
15	25436735	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.916667
15	25436736	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.25
15	25437307	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.217391
15	25437321	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.157895
15	25437369	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.818182
15	25437415	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.428571
15	25437433	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.130435
15	25437479	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.424242
15	25732376	A->G	-	ENSG00000206190	ATP10A	protein_coding	Intergenic	.	.	Alu	0.2
15	25748792	A->G	-	ENSG00000206190	ATP10A	protein_coding	Intergenic	.	.	Alu	0.181818
15	25752503	A->G	-	ENSG00000206190	ATP10A	protein_coding	Intergenic	.	.	Alu	0.416667
15	25768609	A->G	-	ENSG00000206190	ATP10A	protein_coding	Intergenic	.	.	Alu	0.133333
15	30485139	A->G	+	ENSG00000215302	AC127502.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
15	30485163	A->G	+	ENSG00000215302	AC127502.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
15	30937923	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.181818
15	30937925	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	1
15	32468230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
15	32518435	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
15	32522552	A->G	-	ENSG00000223509	AC135983.2	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.125
15	32522690	A->G	-	ENSG00000223509	AC135983.2	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
15	32522691	A->G	-	ENSG00000223509	AC135983.2	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3
15	34099671	A->G	-	ENSG00000134153	EMC7	protein_coding	Intergenic	.	.	Alu	0.333333
15	34246136	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.166667
15	34246798	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.142857
15	34246901	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.3
15	34246902	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.2
15	34246923	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.133333
15	34247886	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.2
15	34249315	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.105263
15	34249325	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.388889
15	34249330	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.266667
15	34249342	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.153846
15	34249356	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.214286
15	34249357	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.230769
15	34326306	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.363636
15	34334034	A->G	-	ENSG00000140199	SLC12A6	protein_coding	Intergenic	.	.	Alu	0.2
15	34949700	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.181818
15	34962242	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.166667
15	34962250	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.230769
15	34962558	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.133333
15	34963868	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.0740741
15	40688498	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
15	40692752	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.153846
15	40692840	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
15	41088944	A->G	-	ENSG00000128908	INO80	protein_coding	Intergenic	.	.	Alu	0.166667
15	41287209	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.263158
15	41439872	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.166667
15	41439926	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.230769
15	41444555	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.153846
15	41444557	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.214286
15	41444563	A->G	+	ENSG00000137815	RTF1	protein_coding	Intergenic	.	.	Alu	0.142857
15	41714693	A->G	+	ENSG00000174197	MGA	protein_coding	Intergenic	.	.	Alu	0.0909091
15	42189484	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.294118
15	42189494	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.416667
15	42189511	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.166667
15	42189512	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.166667
15	42190018	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.545455
15	42190019	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.583333
15	42190033	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.181818
15	42190047	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.214286
15	42190066	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.25
15	42190091	A->G	-	ENSG00000166887	VPS39	protein_coding	Intergenic	.	.	Alu	0.142857
15	42237746	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.333333
15	42238225	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.153846
15	42238260	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.125
15	42238544	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.105263
15	42259237	A->G	-	ENSG00000103978	TMEM87A	protein_coding	Intergenic	.	.	Alu	0.181818
15	43154538	A->G	+	ENSG00000137842	TMEM62	protein_coding	Intergenic	.	.	Alu	0.230769
15	43749703	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.0869565
15	43749904	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.111111
15	44347084	A->G	+	ENSG00000166734	CASC4	protein_coding	Intergenic	.	.	Alu	0.2
15	44462012	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.181818
15	44462081	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.153846
15	44462124	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.153846
15	44462134	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.166667
15	44470577	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.125
15	44470578	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.235294
15	44470589	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.4
15	44470609	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.153846
15	44470620	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.214286
15	44474001	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.2
15	44474242	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.384615
15	44505319	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.272727
15	44506107	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.142857
15	44506123	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.2
15	44506265	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.25
15	44506277	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.2
15	44506517	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.125
15	44506635	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.173913
15	44508298	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intergenic	.	.	Alu	0.166667
15	44565011	A->G	+	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.166667
15	44566971	A->G	+	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.7
15	44719980	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
15	49010655	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.166667
15	49010662	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.416667
15	49010712	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.307692
15	49010749	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.111111
15	49010767	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.142857
15	49010787	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.166667
15	49022153	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.230769
15	49022427	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.142857
15	49022518	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.307692
15	49891598	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.363636
15	49891870	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.545455
15	50000051	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.176471
15	50000054	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.5
15	50000108	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.307692
15	50000172	A->G	-	ENSG00000104043	ATP8B4	protein_coding	Intergenic	.	.	Alu	0.888889
15	50282138	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.25
15	50282186	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50282194	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.3
15	50282492	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.181818
15	50283607	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.2
15	50337546	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.153846
15	50338528	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.166667
15	50338531	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.181818
15	50339206	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.3
15	50345546	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.192308
15	50345554	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.24
15	50345840	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.230769
15	50345912	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.166667
15	50348284	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.142857
15	50348327	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.222222
15	50348415	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.125
15	50348445	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.125
15	50348474	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.117647
15	50348477	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.375
15	50348478	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.125
15	50348762	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.5
15	50348847	A->G	-	ENSG00000104064	GABPB1	protein_coding	Intergenic	.	.	Alu	0.615385
15	50426109	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.1875
15	50426110	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.125
15	50427023	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.5
15	50427122	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.125
15	50427136	A->G	+	ENSG00000138592	USP8	protein_coding	Intergenic	.	.	Alu	0.117647
15	50635863	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.3
15	50637039	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.2
15	50653039	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.230769
15	50656456	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.363636
15	50656462	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.3
15	50679766	A->G	-	ENSG00000092439	TRPM7	protein_coding	Intergenic	.	.	Alu	0.6
15	50715121	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.166667
15	50715142	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.166667
15	50729520	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50734391	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.272727
15	50737052	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50739474	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50740172	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50741737	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50743484	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50745275	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.461538
15	50745279	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.181818
15	50745672	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.166667
15	50745733	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.3
15	50745737	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50751894	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.263158
15	50751921	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.133333
15	50751945	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.166667
15	50752642	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.272727
15	50752649	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.272727
15	50755847	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.181818
15	50755857	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.3
15	50755878	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.3
15	50756668	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.0909091
15	50756669	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.136364
15	50759078	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.153846
15	50759097	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.153846
15	50759174	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.105263
15	50761072	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.181818
15	50761101	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.25
15	50761603	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.153846
15	50761849	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.105263
15	51728380	A->G	-	ENSG00000140280	LYSMD2	protein_coding	Intergenic	.	.	Alu	0.166667
15	51728383	A->G	-	ENSG00000140280	LYSMD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	51729596	A->G	-	ENSG00000140280	LYSMD2	protein_coding	Intergenic	.	.	Alu	0.266667
15	51729653	A->G	-	ENSG00000140280	LYSMD2	protein_coding	Intergenic	.	.	Alu	0.105263
15	51729678	A->G	-	ENSG00000140280	LYSMD2	protein_coding	Intergenic	.	.	Alu	0.125
15	51729679	A->G	-	ENSG00000140280	LYSMD2	protein_coding	Intergenic	.	.	Alu	0.117647
15	51729730	A->G	-	ENSG00000140280	LYSMD2	protein_coding	Intergenic	.	.	Alu	0.272727
15	51730325	A->G	-	ENSG00000140280	LYSMD2	protein_coding	Intergenic	.	.	Alu	0.166667
15	51866269	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.2
15	51866273	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.2
15	51872664	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.181818
15	51872699	A->G	+	ENSG00000138594	TMOD3	protein_coding	Intergenic	.	.	Alu	0.117647
15	52557799	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.25
15	52557850	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.0740741
15	52557872	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.0769231
15	52558237	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.107143
15	52558256	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.28
15	52558882	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.173913
15	52558939	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.129032
15	52562492	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.0555556
15	52566303	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.105263
15	52663723	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.133333
15	52663784	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.333333
15	52664852	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.3
15	52664856	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.2
15	52673592	A->G	-	ENSG00000047346	FAM214A	protein_coding	Intergenic	.	.	Alu	0.125
15	55325662	A->G	+	ENSG00000069943	PIGB	protein_coding	Intergenic	.	.	Alu	0.181818
15	55365461	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.166667
15	55365497	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.125
15	55365506	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.2
15	55365541	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.363636
15	55370556	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.181818
15	55371001	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.2
15	56167261	A->G	-	ENSG00000181827	RFX7	protein_coding	Intergenic	.	.	Alu	0.181818
15	56235239	A->G	-	ENSG00000181827	RFX7	protein_coding	Intergenic	.	.	Alu	0.0909091
15	56960529	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.153846
15	56992012	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.3
15	57119367	A->G	+	ENSG00000140262	TCF12	protein_coding	Intergenic	.	.	Alu	0.2
15	58604111	A->G	-	ENSG00000137845	ADAM10	protein_coding	Intergenic	.	.	Alu	0.137931
15	58604233	A->G	-	ENSG00000137845	ADAM10	protein_coding	Intergenic	.	.	Alu	0.25
15	58604239	A->G	-	ENSG00000137845	ADAM10	protein_coding	Intergenic	.	.	Alu	0.125
15	58604249	A->G	-	ENSG00000137845	ADAM10	protein_coding	Intergenic	.	.	Alu	0.266667
15	58604347	A->G	-	ENSG00000137845	ADAM10	protein_coding	Intergenic	.	.	Alu	0.2
15	58605026	A->G	-	ENSG00000137845	ADAM10	protein_coding	Intergenic	.	.	Alu	0.157895
15	58880744	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58880808	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	58919026	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.181818
15	58919377	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.5
15	58919505	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.125
15	58921939	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.230769
15	58922255	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.181818
15	58922760	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.111111
15	58922773	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.105263
15	58922841	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.166667
15	58922880	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.5
15	58922886	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.153846
15	58923161	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.7
15	58923192	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.125
15	58923324	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.277778
15	58925507	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.117647
15	58929267	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.153846
15	58929365	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.181818
15	58929366	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.272727
15	58929625	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	58929676	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.142857
15	58929677	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.133333
15	58930652	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.125
15	59672345	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.153846
15	59672356	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.2
15	59673682	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.117647
15	59673687	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.1
15	59675421	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.117647
15	59675547	A->G	-	ENSG00000140299	BNIP2	protein_coding	Intergenic	.	.	Alu	0.117647
15	60521357	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.166667
15	60521380	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.117647
15	60521450	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.105263
15	60522557	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.142857
15	60522613	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.153846
15	60522645	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.285714
15	60522675	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.2
15	60522735	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.117647
15	60560509	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.2
15	60560582	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.0952381
15	60560613	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.181818
15	60560626	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.0689655
15	60560633	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.0740741
15	60562076	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.153846
15	60562123	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.111111
15	60562675	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.166667
15	60577400	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.0416667
15	60581820	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.224138
15	63124738	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63124743	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.214286
15	63128365	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.153846
15	63128387	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.142857
15	63128437	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.117647
15	63128439	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.222222
15	63128440	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.166667
15	63129011	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.4375
15	63192893	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0689655
15	63193013	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0454545
15	63193690	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.08
15	63197594	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0740741
15	63197609	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0571429
15	63197612	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.147059
15	63197642	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0697674
15	63197648	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0434783
15	63199769	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0588235
15	63199833	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0645161
15	63199849	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.15625
15	63199855	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.193548
15	63200524	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.137931
15	63200532	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0645161
15	63200597	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.0645161
15	63209532	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.181818
15	63213882	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.4
15	63214030	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.25
15	63214031	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63214600	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.08
15	63214601	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.16
15	63214607	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.26087
15	63215759	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.1875
15	63215765	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63215779	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.105263
15	63215782	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.105263
15	63215875	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.08
15	63215953	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.2
15	63216355	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.578947
15	63216386	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63216409	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63216607	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	1
15	63216608	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.8
15	63216788	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.176471
15	63216792	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.176471
15	63216815	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.25
15	63228206	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.115385
15	63235109	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.76
15	63235110	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.16
15	63235213	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.235294
15	63235217	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.157895
15	63235264	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.2
15	63235309	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.315789
15	63235339	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.55
15	63235394	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63239493	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.181818
15	63241221	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.133333
15	63241275	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.1
15	63241294	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.142857
15	63241298	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.2
15	63280018	A->G	+	ENSG00000138613	APH1B	protein_coding	Intergenic	.	.	Alu	0.181818
15	63280045	A->G	+	ENSG00000138613	APH1B	protein_coding	Intergenic	.	.	Alu	0.181818
15	63281088	A->G	+	ENSG00000138613	APH1B	protein_coding	Intergenic	.	.	Alu	0.3
15	63529990	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63529994	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.181818
15	63546815	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.142857
15	63546868	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0714286
15	63547962	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.1
15	63548793	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0740741
15	63548797	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0689655
15	63550902	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.125
15	63567275	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.230769
15	63568276	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.416667
15	63569316	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.421053
15	63581464	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.153846
15	63581974	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.142857
15	63582162	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0909091
15	63676628	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.153846
15	63676644	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.307692
15	63676661	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.214286
15	63676717	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.272727
15	63681472	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.3
15	63693056	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.166667
15	63693121	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63693341	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.166667
15	63721463	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.181818
15	63740007	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.142857
15	63787804	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.272727
15	63787835	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.142857
15	63787904	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.166667
15	63806284	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	64100854	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.3125
15	64102400	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.333333
15	64109213	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.2
15	64109293	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64117526	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.2
15	64119177	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64119257	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.230769
15	64119356	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.133333
15	64119374	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.647059
15	64119384	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.1875
15	64119387	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.125
15	64120694	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.333333
15	64120720	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.117647
15	64120769	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64120774	A->G	+	ENSG00000028528	SNX1	protein_coding	Intergenic	.	.	Alu	0.166667
15	64868564	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64868565	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.2
15	64877257	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	64881028	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.3
15	64881033	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	65656923	A->G	-	ENSG00000074621	SLC24A1	protein_coding	Intergenic	.	.	Alu	0.2
15	65668238	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65668239	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.384615
15	65668271	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.692308
15	65668301	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.9
15	65668306	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65668347	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.583333
15	65668404	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65668473	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65668476	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.307692
15	65668481	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.416667
15	65668482	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.75
15	65668774	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.363636
15	65668807	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.333333
15	65734847	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.105263
15	65734871	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.409091
15	65734899	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65734910	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.428571
15	65735033	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65735148	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65735160	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65735161	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65735198	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.105263
15	65735206	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.15
15	65735212	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65737117	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.107143
15	65737136	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.172414
15	65737139	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65737151	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0769231
15	65737258	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65737301	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65737331	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
15	65755706	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65757372	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.272727
15	65758386	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65758406	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.285714
15	65760309	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.272727
15	65762439	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.5
15	65762517	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65762546	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65762572	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65762607	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65768155	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65768159	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65768198	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0740741
15	65768199	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65768230	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.08
15	65768283	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65768303	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.277778
15	65774584	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65774954	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.08
15	65777541	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65777546	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65777571	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.15
15	65777580	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.173913
15	65777779	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.151515
15	65777879	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.210526
15	65779079	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65779199	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.222222
15	65779263	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.117647
15	65779276	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65779293	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65779344	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65779373	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65779380	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65779582	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0909091
15	65779626	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.1
15	65779798	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65779887	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0869565
15	65779939	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65779941	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65787190	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.2
15	65788293	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.272727
15	65788347	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65788364	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65788370	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65788675	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.391304
15	65788760	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.230769
15	65789220	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0857143
15	65789298	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.357143
15	65789302	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0666667
15	65789319	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0689655
15	65789324	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.178571
15	65789899	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0714286
15	65789911	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.130435
15	65789912	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0909091
15	65789938	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.12
15	65789988	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	67075768	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.307692
15	67097327	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.0952381
15	67097430	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.166667
15	67113352	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.272727
15	67113364	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.153846
15	67113372	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.25
15	67113373	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.25
15	67124057	A->G	+	ENSG00000166949	SMAD3	protein_coding	Intergenic	.	.	Alu	0.363636
15	68059456	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.125
15	68059591	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.25
15	68065012	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.285714
15	68065841	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.166667
15	68066219	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.133333
15	68066224	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.117647
15	68068240	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.272727
15	68075983	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.181818
15	68118178	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.181818
15	68118616	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.142857
15	68118638	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.166667
15	68136862	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.352941
15	68814316	A->G	-	ENSG00000140350	ANP32A	protein_coding	Intergenic	.	.	Alu	0.153846
15	72352151	A->G	-	ENSG00000260729	AC009690.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72352351	A->G	-	ENSG00000260729	AC009690.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72352385	A->G	-	ENSG00000260729	AC009690.1	protein_coding	Intergenic	.	.	Alu	0.454545
15	72369676	A->G	-	ENSG00000260729	AC009690.1	protein_coding	Intergenic	.	.	Alu	0.153846
15	72369678	A->G	-	ENSG00000260729	AC009690.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72375227	A->G	-	ENSG00000260729	AC009690.1	protein_coding	Intergenic	.	.	Alu	0.2
15	72478955	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.08
15	72478971	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	72481460	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0588235
15	72481564	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.136364
15	72481565	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.304348
15	72481607	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72481640	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72481954	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72482953	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.129032
15	72482980	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.0666667
15	72498602	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.333333
15	72499176	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.266667
15	72499210	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.125
15	72507579	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.222222
15	72507602	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.416667
15	72525841	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.272727
15	72525918	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72528668	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.3
15	72528734	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72528740	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72529343	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72529402	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.117647
15	72529441	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72533725	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72561826	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.125
15	72561852	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72561853	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.6
15	72563083	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.461538
15	72563088	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.363636
15	72563150	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72563151	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.266667
15	72563190	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.133333
15	72563237	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72563293	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72563294	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.25
15	72574984	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.111111
15	72577539	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.583333
15	72577552	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.133333
15	72577553	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.133333
15	72577588	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.235294
15	72577630	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.117647
15	72763458	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.133333
15	72776221	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.235294
15	72776267	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.4375
15	72776271	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.266667
15	72776976	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.5
15	72777006	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.777778
15	72777007	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
15	72778064	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.4
15	72778137	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.181818
15	72778140	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.272727
15	72778166	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.2
15	72778173	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.181818
15	72780687	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.0869565
15	73609549	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.181818
15	73613879	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.272727
15	73613913	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.2
15	73626978	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.133333
15	73626990	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.25
15	73626991	A->G	-	ENSG00000156642	NPTN	protein_coding	Intergenic	.	.	Alu	0.454545
15	74549522	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.2
15	74576521	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intergenic	.	.	Alu	0.272727
15	74846689	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.6
15	74848206	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.272727
15	74848310	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.333333
15	74848335	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.272727
15	74848349	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.25
15	74868640	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.181818
15	74868999	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.133333
15	74869067	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.125
15	74871261	A->G	-	ENSG00000140497	SCAMP2	protein_coding	Intergenic	.	.	Alu	0.176471
15	75376600	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.105263
15	75376618	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.1
15	75376619	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.1
15	75376674	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.111111
15	75376776	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.08
15	75377225	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.25
15	75377231	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.428571
15	75377428	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.0714286
15	75377442	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.0869565
15	75377501	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.0606061
15	75378205	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.6
15	75378525	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.133333
15	75379187	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.117647
15	75382813	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	75382824	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.2
15	75383667	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.153846
15	75383773	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.2
15	75383895	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.2
15	75428646	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.454545
15	75428653	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.181818
15	75429299	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.153846
15	75443035	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.125
15	75877010	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.133333
15	75885315	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.0714286
15	75885368	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.0512821
15	75886139	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.684211
15	75886143	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.782609
15	75886151	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.217391
15	75886200	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.384615
15	75886219	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.133333
15	75886220	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.2
15	75886249	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.166667
15	75886367	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.0952381
15	75886638	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.111111
15	75886767	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.6
15	75886784	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.214286
15	75886789	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.142857
15	75886793	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.214286
15	75886808	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.117647
15	75886812	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.318182
15	75886845	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.136364
15	75887112	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.0681818
15	77040659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
15	78022664	A->G	-	ENSG00000167202	TBC1D2B	protein_coding	Intergenic	.	.	Alu	0.2
15	78022673	A->G	-	ENSG00000167202	TBC1D2B	protein_coding	Intergenic	.	.	Alu	0.277778
15	78022724	A->G	-	ENSG00000167202	TBC1D2B	protein_coding	Intergenic	.	.	Alu	0.214286
15	78022762	A->G	-	ENSG00000167202	TBC1D2B	protein_coding	Intergenic	.	.	Alu	0.2
15	78022772	A->G	-	ENSG00000167202	TBC1D2B	protein_coding	Intergenic	.	.	Alu	0.333333
15	78468065	A->G	+	ENSG00000136381	IREB2	protein_coding	Intergenic	.	.	Alu	0.3
15	78875959	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.166667
15	78876038	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.153846
15	78876055	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.2
15	78887803	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.108108
15	78887878	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.125
15	78887879	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.272727
15	78887883	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.375
15	78887896	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0689655
15	78887918	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.125
15	78887934	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	78887959	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	78887962	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.136364
15	78888199	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0588235
15	78888360	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.06
15	78889934	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0675676
15	78890013	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	78890024	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0576923
15	78890047	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0625
15	78890064	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0350877
15	78890069	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0535714
15	78890109	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.05
15	78890116	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0444444
15	78890126	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	78890141	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.119048
15	78890582	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.205128
15	78890585	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.184211
15	78890594	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0555556
15	78890599	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.147059
15	78898424	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
15	78898449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
15	78898484	A->G	+	.	.	.	Intergenic	.	.	Alu	0.037037
15	78899206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
15	78899308	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0240964
15	78899394	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
15	78899476	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
15	78899508	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0222222
15	78899512	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0206186
15	78900531	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
15	78903480	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
15	80064770	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80064780	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80065734	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.105263
15	80065755	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
15	80069789	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0740741
15	80069818	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0740741
15	80083012	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80083013	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80083131	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.461538
15	80083173	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.105263
15	80083190	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.176471
15	80083198	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.8
15	80083274	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0416667
15	80083637	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.322581
15	80083705	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.121212
15	80083729	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.185185
15	80083730	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0740741
15	80083731	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80083744	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0909091
15	80083752	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0909091
15	80083764	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.192308
15	80083770	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0740741
15	80083771	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.333333
15	80083817	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.09375
15	80088290	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.178571
15	80088334	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.52381
15	80088335	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.47619
15	80088382	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.125
15	80089491	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0666667
15	80089508	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80089516	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0666667
15	80089517	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.1
15	80091679	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80091703	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80091709	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.178571
15	80091739	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.136364
15	80091743	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80093239	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.1875
15	80097069	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.263158
15	80097086	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80097099	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.272727
15	80097100	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.458333
15	80097117	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.136364
15	80097141	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.210526
15	80097177	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.1
15	80097183	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.625
15	80097209	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80097252	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.541667
15	80097261	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.333333
15	80097262	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.666667
15	80097393	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80097399	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.285714
15	80097410	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.857143
15	80097414	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.375
15	80097415	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.4375
15	80097483	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.461538
15	80097487	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80097488	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.461538
15	80097505	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.363636
15	80097555	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.117647
15	80097570	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.263158
15	80101309	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80101352	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.2
15	80101446	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0952381
15	80101451	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80101873	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80101959	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.181818
15	80102003	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.142857
15	80102239	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.12
15	80102251	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80102267	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.125
15	80102271	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.15
15	80102309	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80102389	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80102398	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.153846
15	80103918	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.708333
15	80103928	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.259259
15	80103978	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.157895
15	80104032	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0869565
15	80104047	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0666667
15	80104257	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0526316
15	80104266	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.184211
15	80104267	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.657895
15	80104272	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.184211
15	80104294	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0857143
15	80104320	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0833333
15	80104321	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.0769231
15	80104346	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.214286
15	80104380	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.733333
15	80108762	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80108867	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	80111982	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.08
15	80111998	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.384615
15	80112017	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.470588
15	80112394	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.214286
15	80112657	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	80112658	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.111111
15	82823627	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.130435
15	82823659	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.1
15	82823666	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0833333
15	82824214	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.230769
15	82824238	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.153846
15	82824258	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.3125
15	82824360	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.25
15	82824462	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0606061
15	82824666	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.228571
15	82824700	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.321429
15	82824701	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.208333
15	82824886	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0487805
15	82824901	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0952381
15	82824931	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0416667
15	82824937	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0980392
15	82824941	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.265306
15	82824942	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.04
15	82824956	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0512821
15	82824972	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.114286
15	82825002	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.344828
15	82825004	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.285714
15	82825014	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.09375
15	82825019	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0625
15	82825031	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0555556
15	82825046	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.0606061
15	82825074	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.151515
15	83023472	A->G	-	ENSG00000259767	AC022558.1	sense_intronic	Intergenic	.	.	Alu	0.181818
15	83052359	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.0882353
15	83052664	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.153846
15	83052846	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.166667
15	83054094	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.1875
15	83054136	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.4
15	83054216	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.6
15	83054255	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.166667
15	83054323	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.6
15	83054324	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.173913
15	83054335	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.12
15	83054647	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.125
15	83054686	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.142857
15	83054731	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.166667
15	83054732	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.272727
15	83054788	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.272727
15	83054832	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.363636
15	83056034	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.05
15	83056080	A->G	-	ENSG00000260608	AC024270.4	antisense	Intergenic	.	.	Alu	0.0526316
15	84532815	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
15	84532825	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
15	84537031	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
15	84537140	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
15	84551973	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
15	84551974	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
15	84551980	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.294118
15	84552059	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.421053
15	84552119	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
15	84552298	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
15	84552319	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
15	84552464	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
15	84561171	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
15	84690505	A->G	-	ENSG00000140612	SEC11A	protein_coding	Intergenic	.	.	Alu	0.272727
15	84752024	A->G	+	ENSG00000166716	ZNF592	protein_coding	Intergenic	.	.	Alu	0.2
15	85400349	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.181818
15	85401062	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.166667
15	85586336	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.117647
15	85587668	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.105263
15	85595261	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.25
15	85641693	A->G	+	ENSG00000259367	AC087286.2	antisense	Intergenic	.	.	Alu	0.615385
15	85657012	A->G	+	ENSG00000259367	AC087286.2	antisense	Intergenic	.	.	Alu	0.133333
15	85677786	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.333333
15	85677788	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.25
15	85711902	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.166667
15	85711974	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.125
15	88640735	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.25
15	88640844	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.181818
15	88640879	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.272727
15	88640887	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.181818
15	88641110	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.1875
15	88641134	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.222222
15	88641247	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.176471
15	88642020	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.133333
15	88642681	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.157895
15	88642694	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.227273
15	88642697	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.272727
15	88642710	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.16
15	88642758	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.181818
15	88642814	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.0769231
15	88642825	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.578947
15	88643009	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.153846
15	88643084	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.133333
15	88643088	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.1875
15	88643108	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.117647
15	88643160	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.230769
15	88643190	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.294118
15	89094623	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.210526
15	89097922	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.285714
15	89097930	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.111111
15	89097970	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.230769
15	89097984	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.153846
15	89098024	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.294118
15	89099366	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.142857
15	89099416	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.0952381
15	89099418	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.272727
15	89099515	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.421053
15	89099562	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.166667
15	89099718	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.117647
15	89099719	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.117647
15	89105916	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	89105970	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.166667
15	89106094	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	90542279	A->G	+	ENSG00000140577	CRTC3	protein_coding	Intergenic	.	.	Alu	0.153846
15	92892970	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0392157
15	92893097	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0689655
15	92894137	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0983607
15	92909727	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	92910068	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0769231
15	92910532	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.25
15	92910593	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.153846
15	92910616	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.176471
15	92911542	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	92911552	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.190476
15	92911617	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.1
15	92911618	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0952381
15	92911676	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.172414
15	92916610	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.222222
15	92916617	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.1
15	92916826	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0689655
15	92917441	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	92917450	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.5
15	92917516	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	92919667	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	92950673	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.0952381
15	92987373	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	92987474	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.230769
15	92987480	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	92987486	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.272727
15	92987571	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.133333
15	98655812	A->G	+	ENSG00000140443	IGF1R	protein_coding	Intergenic	.	.	Alu	0.166667
15	98655928	A->G	+	ENSG00000140443	IGF1R	protein_coding	Intergenic	.	.	Alu	0.133333
15	98655936	A->G	+	ENSG00000140443	IGF1R	protein_coding	Intergenic	.	.	Alu	0.111111
15	99605075	A->G	+	ENSG00000068305	MEF2A	protein_coding	Intergenic	.	.	Alu	0.2
15	99663382	A->G	+	ENSG00000068305	MEF2A	protein_coding	Intergenic	.	.	Alu	0.333333
15	99663388	A->G	+	ENSG00000068305	MEF2A	protein_coding	Intergenic	.	.	Alu	0.15
15	99694532	A->G	+	ENSG00000068305	MEF2A	protein_coding	Intergenic	.	.	Alu	0.444444
16	11569487	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.3
16	11571967	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.333333
16	11575983	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.15
16	11578174	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.266667
16	11580828	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.111111
16	11581402	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.125
16	11581403	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.375
16	11581444	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.111111
16	11581459	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.153846
16	11581481	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.2
16	11581532	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.111111
16	11581567	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.294118
16	11581583	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.2
16	11681048	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.2
16	11707516	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.235294
16	11707517	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.117647
16	11707825	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.294118
16	11707830	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.4
16	11707861	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.0952381
16	11707865	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.190476
16	11707866	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.190476
16	11707891	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.3125
16	11707903	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.222222
16	11707917	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.222222
16	11707954	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.333333
16	11707962	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.307692
16	11713444	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.181818
16	11713459	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.166667
16	11713479	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.25
16	11713483	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.230769
16	11720813	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.133333
16	11720814	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.466667
16	11720815	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.6
16	11720915	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.181818
16	11724135	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.214286
16	11724200	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.357143
16	11724529	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.117647
16	11725913	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.0869565
16	11725968	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.1875
16	11726042	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.266667
16	11726393	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.357143
16	11787524	A->G	-	ENSG00000122299	ZC3H7A	protein_coding	Intergenic	.	.	Alu	0.363636
16	11882758	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.285714
16	11882772	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.416667
16	11892227	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.272727
16	11893138	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.2
16	11893274	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.166667
16	11893275	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.272727
16	11893298	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.181818
16	11893376	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.153846
16	11893397	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.181818
16	11895664	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.148148
16	11895719	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.285714
16	11895723	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.25
16	11900116	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.117647
16	11900117	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.125
16	11900911	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.1
16	11901080	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.117647
16	11901709	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.153846
16	11901879	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.1
16	11901908	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.133333
16	11901911	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.133333
16	11902617	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.133333
16	11902680	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.538462
16	11902989	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.117647
16	11904234	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.153846
16	11904918	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.125
16	11904992	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.111111
16	11905006	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.1
16	11905054	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.111111
16	11905655	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.214286
16	11906104	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.153846
16	11906459	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.25
16	11906465	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.133333
16	11906479	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0714286
16	11909801	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0967742
16	11909816	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0588235
16	11909982	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.184211
16	11909998	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.097561
16	11911968	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.105263
16	11911972	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	14635803	A->G	+	ENSG00000103429	BFAR	protein_coding	Intergenic	.	.	Alu	0.2
16	14977552	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	14978595	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.133333
16	14978597	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.133333
16	14978647	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.272727
16	14978669	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	14978672	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	14986008	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.2
16	14990946	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.5
16	15080559	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.4
16	15080626	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15080630	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.25
16	15083214	A->G	-	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15680774	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.230769
16	15680775	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15680792	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15682276	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.230769
16	15682286	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15682909	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.4
16	15682941	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15683762	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intergenic	.	.	Alu	0.125
16	15683843	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intergenic	.	.	Alu	0.1875
16	15685367	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.2
16	15686541	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15686557	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15686558	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.363636
16	15697080	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.214286
16	15697097	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.533333
16	15697102	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.266667
16	15697144	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.176471
16	15697184	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15697263	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.333333
16	15697317	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.272727
16	15697507	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.230769
16	15697508	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15697509	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.384615
16	15698041	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15698049	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15698270	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.272727
16	15698277	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.2
16	15733642	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.176471
16	15733643	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.117647
16	15951924	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15954056	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15954085	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.1
16	15956119	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.333333
16	15956572	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.444444
16	15956599	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.333333
16	15960222	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0555556
16	15960226	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0555556
16	15960344	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.130435
16	15965553	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15965554	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15966261	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15966833	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15966933	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.214286
16	15968069	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.117647
16	15968102	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.111111
16	15968108	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.15
16	15968122	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.357143
16	15968157	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.117647
16	15968239	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15968308	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.105263
16	15968510	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.2
16	15968747	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15969032	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.1
16	15969037	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.105263
16	15972860	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15972863	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	15972928	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.4
16	15973720	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	15973721	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15973743	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	15973780	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.105263
16	15973794	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.388889
16	15973838	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15974812	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	15974818	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.230769
16	15974887	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.411765
16	15975054	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.333333
16	15975063	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.117647
16	15975581	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.133333
16	15975686	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.411765
16	15976250	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.1875
16	15978106	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0714286
16	16017334	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.111111
16	16017343	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.470588
16	16017370	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.176471
16	16017378	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.25
16	16019153	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	16021590	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	16021610	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.285714
16	16021623	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	16021645	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.0869565
16	16022931	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.285714
16	16022960	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.266667
16	16023086	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.3
16	16023149	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.307692
16	16029501	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	16030920	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.4
16	16030977	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	16113407	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	16114421	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.285714
16	16114441	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	16116743	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.153846
16	16116774	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.307692
16	16116780	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.166667
16	16127300	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.25
16	16128252	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.111111
16	16128765	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.4
16	16128785	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.545455
16	16129663	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	16138882	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.230769
16	16138890	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.142857
16	16138910	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.181818
16	16138944	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.333333
16	18787041	A->G	-	ENSG00000134419	RPS15A	protein_coding	Intergenic	.	.	Alu	0.181818
16	18787047	A->G	-	ENSG00000134419	RPS15A	protein_coding	Intergenic	.	.	Alu	0.25
16	18800022	A->G	-	ENSG00000260342	AC138811.2	protein_coding	Intergenic	.	.	Alu	0.153846
16	18922823	A->G	-	ENSG00000157106	SMG1	protein_coding	Intergenic	.	.	Alu	0.210526
16	18922835	A->G	-	ENSG00000157106	SMG1	protein_coding	Intergenic	.	.	Alu	0.470588
16	18922836	A->G	-	ENSG00000157106	SMG1	protein_coding	Intergenic	.	.	Alu	0.277778
16	20739249	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.5
16	20739395	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.153846
16	20739457	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.25
16	20740247	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.15
16	20740248	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.15
16	20740284	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.35
16	20740313	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.153846
16	21466785	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
16	21466789	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.285714
16	21466796	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
16	21504537	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
16	21505276	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
16	21505277	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
16	21506885	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.411765
16	21506899	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3125
16	21506900	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
16	21516802	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	21516853	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
16	21850483	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.272727
16	21850486	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.384615
16	21861817	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.2
16	21868346	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.125
16	21868384	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.133333
16	21868398	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.0952381
16	21868421	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.0869565
16	21868434	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.176471
16	21868439	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.235294
16	21875378	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.75
16	21875405	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.333333
16	21956099	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.4
16	21956266	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.277778
16	21956329	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.333333
16	21956391	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.333333
16	21956423	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.2
16	22208629	A->G	+	ENSG00000103319	EEF2K	protein_coding	Intergenic	.	.	Alu	0.214286
16	22299989	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.1875
16	22330143	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.5
16	22330320	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.416667
16	22330321	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.5
16	22330346	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.153846
16	22330347	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.153846
16	22477112	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
16	22477114	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
16	22477938	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
16	22477968	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
16	22477969	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
16	22477978	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	23462366	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	23476990	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.181818
16	23477014	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.25
16	23507576	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23507714	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.363636
16	23507717	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.2
16	23507718	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23507908	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.333333
16	23507934	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.25
16	23507946	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.571429
16	23508245	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.2
16	23567313	A->G	+	ENSG00000103353	UBFD1	protein_coding	Intergenic	.	.	Alu	0.666667
16	23860630	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.2
16	23860666	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.181818
16	23860680	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.2
16	23871717	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.25
16	23871758	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.142857
16	23871761	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.142857
16	23924013	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.5
16	23924019	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.5
16	23943323	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.3
16	24210071	A->G	+	ENSG00000166501	PRKCB	protein_coding	Intergenic	.	.	Alu	0.181818
16	24735010	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.0952381
16	24735162	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.2
16	24741888	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.153846
16	24741890	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.166667
16	24741954	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.105263
16	24741976	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.0952381
16	24742010	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.0833333
16	24742058	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.0689655
16	24742736	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.428571
16	24742792	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.384615
16	24742852	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.0909091
16	24742896	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.0645161
16	24743345	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.166667
16	24743583	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.181818
16	24743589	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.142857
16	24745741	A->G	+	ENSG00000090905	TNRC6A	protein_coding	Intergenic	.	.	Alu	0.222222
16	24970938	A->G	-	ENSG00000140750	ARHGAP17	protein_coding	Intergenic	.	.	Alu	0.166667
16	27316106	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.2
16	27317118	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.1875
16	27361213	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.3
16	27479561	A->G	-	ENSG00000077235	GTF3C1	protein_coding	Intergenic	.	.	Alu	0.181818
16	27479580	A->G	-	ENSG00000077235	GTF3C1	protein_coding	Intergenic	.	.	Alu	0.2
16	27479966	A->G	-	ENSG00000077235	GTF3C1	protein_coding	Intergenic	.	.	Alu	0.666667
16	28168267	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.307692
16	28168274	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.5
16	28168288	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.461538
16	28168293	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.125
16	28168345	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.0952381
16	28168359	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.142857
16	28168371	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.315789
16	28168383	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.333333
16	28168400	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.125
16	28168431	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28168474	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.277778
16	28168477	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.3125
16	28168612	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.0588235
16	28168637	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.142857
16	28168670	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.857143
16	28168699	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.230769
16	28168740	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.208333
16	28168755	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.0645161
16	28168766	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.46875
16	28168823	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.341463
16	28168847	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.0540541
16	28168852	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.0909091
16	28168894	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.5
16	28168903	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.172414
16	28827616	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.216216
16	28827686	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0512821
16	28827795	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.173913
16	28828325	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.466667
16	28828331	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.1875
16	28828401	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.214286
16	28828434	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.166667
16	28828435	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.166667
16	28828436	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.166667
16	28828439	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.272727
16	28828517	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.166667
16	28828532	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.111111
16	28828536	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.235294
16	28828537	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.222222
16	28828539	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.611111
16	28828811	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0645161
16	28828825	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.4375
16	28828855	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0512821
16	28828885	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0810811
16	28828923	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.611111
16	28828926	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.428571
16	28828993	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.08
16	28829005	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.12
16	28829007	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.346154
16	28829011	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.384615
16	28829096	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.125
16	28829136	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.304348
16	28829148	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0740741
16	28829237	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.125
16	28829279	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.111111
16	28831381	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.241935
16	28831392	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0289855
16	28831428	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.25
16	28831445	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.215686
16	28831494	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0638298
16	28831504	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0392157
16	28831686	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.2
16	28831722	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.205128
16	28831723	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0512821
16	28831724	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.05
16	28831726	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.05
16	28831737	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0666667
16	28831757	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.114286
16	28831805	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.113636
16	28831810	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.0512821
16	28918790	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.583333
16	28918843	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.181818
16	28918878	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.363636
16	28918918	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.25
16	28918932	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.4
16	28918936	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.230769
16	28955010	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.4
16	28955104	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.315789
16	28955105	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.166667
16	28955126	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.857143
16	28955143	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.481481
16	28955146	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.259259
16	28955157	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.172414
16	28955176	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.206897
16	28955305	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.25
16	28955306	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.583333
16	28955322	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.25
16	28955343	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	28955344	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	28955357	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.5
16	28955616	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.272727
16	28955699	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.3
16	28955716	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	28955775	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.181818
16	28955841	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.388889
16	28955850	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.133333
16	28955851	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.266667
16	28958308	A->G	+	ENSG00000260853	AC109460.2	antisense	Intergenic	.	.	Alu	0.181818
16	29547196	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	29577445	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	29588063	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
16	29589647	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	29591765	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.352941
16	29591766	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.176471
16	29591790	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.461538
16	29591793	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
16	30263608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
16	30653578	A->G	+	ENSG00000156858	PRR14	protein_coding	Intergenic	.	.	Alu	0.181818
16	31121202	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0526316
16	31121826	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.15
16	31359249	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.533333
16	31359262	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31452192	A->G	-	ENSG00000261474	AC026471.4	lincRNA	Intergenic	.	.	Alu	0.181818
16	31454273	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
16	31454310	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
16	31454326	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
16	31891754	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.09375
16	31892121	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.09375
16	31892130	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.0967742
16	31892179	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.1
16	31892300	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.315789
16	31892310	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.352941
16	31892315	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.15
16	31892381	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.157895
16	31892382	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.142857
16	46654769	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
16	46661084	A->G	-	ENSG00000261131	AC012186.2	sense_intronic	Intergenic	.	.	Alu	0.272727
16	48369509	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.111111
16	48369536	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.111111
16	48369630	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.0769231
16	48369660	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.103448
16	48369666	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.107143
16	48369730	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.0909091
16	48376630	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.133333
16	48376646	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.2
16	48377875	A->G	-	ENSG00000196470	SIAH1	protein_coding	Intergenic	.	.	Alu	0.181818
16	48559529	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.0612245
16	48584666	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.166667
16	48593825	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.181818
16	48604354	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.105263
16	48604441	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.166667
16	48605101	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.214286
16	48605233	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.2
16	48609211	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.153846
16	50164851	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.272727
16	50341390	A->G	-	ENSG00000166164	BRD7	protein_coding	Intergenic	.	.	Alu	0.238095
16	50341458	A->G	-	ENSG00000166164	BRD7	protein_coding	Intergenic	.	.	Alu	0.133333
16	50341475	A->G	-	ENSG00000166164	BRD7	protein_coding	Intergenic	.	.	Alu	0.333333
16	50341484	A->G	-	ENSG00000166164	BRD7	protein_coding	Intergenic	.	.	Alu	0.363636
16	50341521	A->G	-	ENSG00000166164	BRD7	protein_coding	Intergenic	.	.	Alu	0.416667
16	50341535	A->G	-	ENSG00000166164	BRD7	protein_coding	Intergenic	.	.	Alu	0.25
16	50341543	A->G	-	ENSG00000166164	BRD7	protein_coding	Intergenic	.	.	Alu	0.181818
16	50342688	A->G	-	ENSG00000166164	BRD7	protein_coding	Intergenic	.	.	Alu	0.2
16	50674288	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.222222
16	50674339	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.176471
16	50674347	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.235294
16	50674374	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.181818
16	50674388	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.222222
16	50674436	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.136364
16	50674475	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.08
16	50674494	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.0909091
16	50745468	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0714286
16	50745472	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0526316
16	50745682	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0645161
16	50745694	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0625
16	50746087	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.133333
16	50746142	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.125
16	50746179	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.133333
16	50746221	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0952381
16	50746258	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0833333
16	50749000	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0833333
16	50749003	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0526316
16	50749011	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.125
16	50749042	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0555556
16	50749046	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.189189
16	50749055	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.0588235
16	50749108	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.136364
16	50758997	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.25
16	53440573	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.142857
16	53440575	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.125
16	53440633	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.105263
16	53440693	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.133333
16	53440738	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.133333
16	53441921	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.181818
16	53441950	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.142857
16	53441960	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.461538
16	53442002	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.15
16	53442005	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.2
16	53442081	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.533333
16	53442205	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.5625
16	53442209	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.6
16	53442218	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.352941
16	53447748	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.181818
16	53466553	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.384615
16	53467623	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.142857
16	53468357	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.166667
16	53469149	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.181818
16	56385372	A->G	-	ENSG00000159461	AMFR	protein_coding	Intergenic	.	.	Alu	0.25
16	56385433	A->G	-	ENSG00000159461	AMFR	protein_coding	Intergenic	.	.	Alu	0.153846
16	56385436	A->G	-	ENSG00000159461	AMFR	protein_coding	Intergenic	.	.	Alu	0.153846
16	56385512	A->G	-	ENSG00000159461	AMFR	protein_coding	Intergenic	.	.	Alu	0.666667
16	56940406	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.384615
16	56940446	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.148148
16	56940472	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.1
16	56940479	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.344828
16	56940516	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0769231
16	56940553	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0909091
16	56940813	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0666667
16	56940859	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.266667
16	56940860	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0689655
16	57056307	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.416667
16	57056370	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.416667
16	57056391	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.3
16	57056403	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.590909
16	57056430	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.722222
16	57056487	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.0952381
16	57056499	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.315789
16	57056510	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.35
16	57056511	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.15
16	57056512	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.15
16	57056557	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.25
16	57056678	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.153846
16	57056933	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.133333
16	57056942	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.133333
16	57057373	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.769231
16	57057374	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.153846
16	57057411	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.722222
16	57175280	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.25
16	57175285	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.25
16	57175286	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.333333
16	57177481	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.5
16	57177746	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.1
16	57177749	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.2
16	57177767	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.333333
16	57177768	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.166667
16	57177822	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.2
16	57177824	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.454545
16	57177853	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.4
16	57177869	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.533333
16	57177895	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.666667
16	57177958	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.3
16	57183560	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.181818
16	57183600	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.130435
16	57183606	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.166667
16	57183612	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.130435
16	57183619	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.73913
16	57193548	A->G	+	ENSG00000159579	RSPRY1	protein_coding	Intergenic	.	.	Alu	0.272727
16	57193567	A->G	+	ENSG00000159579	RSPRY1	protein_coding	Intergenic	.	.	Alu	0.363636
16	57654996	A->G	+	ENSG00000205336	ADGRG1	protein_coding	Intergenic	.	.	Alu	0.2
16	58612019	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	58612027	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.153846
16	58617143	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.142857
16	58617946	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.142857
16	58618336	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.133333
16	58618340	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.2
16	58618349	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	58619157	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.4375
16	58622192	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.3
16	58622603	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.0740741
16	58626896	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.222222
16	66806492	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.235294
16	66806497	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.133333
16	66806510	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.25
16	66807958	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.333333
16	66807982	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	66808035	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.2
16	66808051	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.615385
16	66808055	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.230769
16	66808124	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.0952381
16	66815430	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.176471
16	66815443	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.111111
16	66822391	A->G	-	ENSG00000159593	NAE1	protein_coding	Intergenic	.	.	Alu	0.2
16	67032245	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.153846
16	67032282	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.181818
16	67072896	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.3
16	67078449	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.272727
16	67078498	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.333333
16	67081659	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.2
16	67081685	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.9
16	67081691	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.333333
16	67232857	A->G	+	ENSG00000135723	FHOD1	protein_coding	Intergenic	.	.	Alu	0.3
16	67234838	A->G	-	ENSG00000135723	FHOD1	protein_coding	Intergenic	.	.	Alu	0.416667
16	67234842	A->G	-	ENSG00000135723	FHOD1	protein_coding	Intergenic	.	.	Alu	0.454545
16	67466408	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.2
16	67471417	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.166667
16	67471449	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.3
16	67559142	A->G	-	ENSG00000261386	AC027682.4	lincRNA	Intergenic	.	.	Alu	0.153846
16	67567104	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.157895
16	67574752	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67574820	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67574824	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67575142	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.133333
16	67575191	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.461538
16	67578433	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.142857
16	67578450	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.230769
16	67581423	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.133333
16	67581440	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67581643	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.230769
16	67581765	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67583615	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.181818
16	67587194	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.181818
16	67587197	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.181818
16	67587937	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.105263
16	67588861	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67589078	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67589090	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67589825	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.1
16	67589993	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.0689655
16	67590750	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67590781	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67591789	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.363636
16	67591810	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.428571
16	67591838	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.3
16	67591848	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.272727
16	67591975	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.0833333
16	67591987	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.125
16	67592275	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.363636
16	67592292	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.3
16	67592559	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.25
16	67597087	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.25
16	67597090	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.230769
16	67598008	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.166667
16	67598013	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.117647
16	67598051	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.3
16	67598054	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67598076	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.153846
16	67603873	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.4
16	67603874	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.4
16	68145036	A->G	+	ENSG00000072736	NFATC3	protein_coding	Intergenic	.	.	Alu	0.142857
16	69375677	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.166667
16	69380571	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.142857
16	69380594	A->G	-	ENSG00000132604	TERF2	protein_coding	Intergenic	.	.	Alu	0.230769
16	69571105	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.153846
16	69574762	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.0952381
16	69575268	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69580346	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.5
16	69580384	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.133333
16	69580410	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.368421
16	69580480	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69580862	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.230769
16	69581222	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.125
16	69581242	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.230769
16	69582190	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.272727
16	69584039	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69584146	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69584639	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69584642	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69584650	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.357143
16	69584678	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.142857
16	69589950	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.153846
16	69589975	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.411765
16	69593352	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69598127	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.214286
16	69598128	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.142857
16	69629672	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.111111
16	69629744	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.181818
16	69638010	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.1
16	69638035	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.173913
16	69638096	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.08
16	69661945	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.230769
16	69661961	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.166667
16	69663061	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.3
16	69664290	A->G	+	ENSG00000102908	NFAT5	protein_coding	Intergenic	.	.	Alu	0.2
16	69994864	A->G	-	ENSG00000196696	AC009022.1	processed_transcript	Intergenic	.	.	Alu	0.583333
16	69994865	A->G	-	ENSG00000196696	AC009022.1	processed_transcript	Intergenic	.	.	Alu	0.166667
16	69994879	A->G	-	ENSG00000196696	AC009022.1	processed_transcript	Intergenic	.	.	Alu	0.181818
16	70543628	A->G	+	ENSG00000189091	SF3B3	protein_coding	Intergenic	.	.	Alu	0.3
16	70543679	A->G	+	ENSG00000189091	SF3B3	protein_coding	Intergenic	.	.	Alu	0.2
16	71750912	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.1875
16	71751055	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.117647
16	71751249	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.166667
16	71760423	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.181818
16	71774266	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.1875
16	71804787	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intergenic	.	.	Alu	0.214286
16	71897040	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.2
16	71901275	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.153846
16	71902435	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.2
16	71902470	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.181818
16	71906377	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.2
16	71925576	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.25
16	71925590	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.142857
16	71925703	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.363636
16	71925708	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.363636
16	71925875	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.1
16	71925880	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.0833333
16	71926095	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.5
16	71926096	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.6
16	71926104	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.3
16	71926395	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.4
16	71926424	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.166667
16	71926469	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.153846
16	71926483	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.2
16	71926607	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.166667
16	71926608	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.25
16	71927238	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.272727
16	71927245	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.125
16	72107054	A->G	+	ENSG00000140829	DHX38	protein_coding	Intergenic	.	.	Alu	0.2
16	74298594	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.3125
16	74298661	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.166667
16	74298662	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.0689655
16	74298715	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.105263
16	74298731	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.266667
16	74298777	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.1875
16	74298824	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.130435
16	74299428	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.357143
16	74299483	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.25
16	74299515	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.103448
16	74299525	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.172414
16	74302567	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.1
16	74302622	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.176471
16	74303815	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.142857
16	74303879	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.0952381
16	74363483	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
16	74363485	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
16	74364237	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.210526
16	74364506	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.461538
16	74364745	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
16	74365720	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
16	74365721	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
16	74365816	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
16	74603324	A->G	-	ENSG00000090863	GLG1	protein_coding	Intergenic	.	.	Alu	0.133333
16	74603327	A->G	-	ENSG00000090863	GLG1	protein_coding	Intergenic	.	.	Alu	0.461538
16	74603328	A->G	-	ENSG00000090863	GLG1	protein_coding	Intergenic	.	.	Alu	0.153846
16	75450690	A->G	-	ENSG00000261717	AC009163.4	protein_coding	Intergenic	.	.	Alu	0.2
16	75450828	A->G	-	ENSG00000261717	AC009163.4	protein_coding	Intergenic	.	.	Alu	0.153846
16	75451305	A->G	-	ENSG00000261717	AC009163.4	protein_coding	Intergenic	.	.	Alu	0.2
16	75574839	A->G	+	ENSG00000034713	GABARAPL2	protein_coding	Intergenic	.	.	Alu	0.272727
16	75574912	A->G	+	ENSG00000034713	GABARAPL2	protein_coding	Intergenic	.	.	Alu	0.25
16	75574953	A->G	+	ENSG00000034713	GABARAPL2	protein_coding	Intergenic	.	.	Alu	0.125
16	75574978	A->G	+	ENSG00000034713	GABARAPL2	protein_coding	Intergenic	.	.	Alu	0.125
16	75574984	A->G	+	ENSG00000034713	GABARAPL2	protein_coding	Intergenic	.	.	Alu	0.125
16	75648760	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.0833333
16	75648815	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.0769231
16	75648816	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.111111
16	75648828	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.0645161
16	75648882	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.333333
16	75648926	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.0645161
16	75649102	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.111111
16	75649324	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.142857
16	75649334	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.115385
16	75649423	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.0952381
16	75649437	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.105263
16	75649456	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.12
16	75649465	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.142857
16	75650693	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.153846
16	75650697	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.384615
16	75650771	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.0666667
16	75650806	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.151515
16	85558938	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.2
16	85558958	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	85558960	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.2
16	85560192	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.230769
16	85560216	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	85560261	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	85560265	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.181818
16	85560317	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.2
16	85560856	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.166667
16	85560867	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.153846
16	85560873	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.470588
16	85560950	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.105263
16	85561047	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.333333
16	85561057	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.222222
16	85618916	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.416667
16	85618925	A->G	+	ENSG00000131149	GSE1	protein_coding	Intergenic	.	.	Alu	0.2
16	85783055	A->G	-	ENSG00000131148	EMC8	protein_coding	Intergenic	.	.	Alu	0.307692
16	85783057	A->G	-	ENSG00000131148	EMC8	protein_coding	Intergenic	.	.	Alu	0.285714
16	85794472	A->G	-	ENSG00000131148	EMC8	protein_coding	Intergenic	.	.	Alu	0.166667
16	87357493	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.2
16	87357505	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.142857
16	87357521	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.153846
16	87357523	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.153846
16	87357529	A->G	-	ENSG00000103264	FBXO31	protein_coding	Intergenic	.	.	Alu	0.166667
16	87396957	A->G	+	ENSG00000261592	AC010531.3	antisense	Intergenic	.	.	Alu	0.3
16	88591177	A->G	+	ENSG00000158545	ZC3H18	protein_coding	Intergenic	.	.	Alu	0.8
16	88644581	A->G	-	ENSG00000051523	CYBA	protein_coding	Intergenic	.	.	Alu	0.0384615
16	88647296	A->G	-	ENSG00000051523	CYBA	protein_coding	Intergenic	.	.	Alu	0.117647
16	88730482	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intergenic	.	.	Alu	0.727273
16	88961913	A->G	-	ENSG00000129993	CBFA2T3	protein_coding	Intergenic	.	.	Alu	1
16	89387561	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89389223	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.166667
16	89389228	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89389284	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.133333
16	89405359	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.214286
16	89405421	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.166667
16	89405601	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.125
16	89446492	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89469153	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.0869565
16	89469460	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
16	89650640	A->G	-	ENSG00000131165	CHMP1A	protein_coding	Intergenic	.	.	Alu	0.272727
16	89651133	A->G	-	ENSG00000131165	CHMP1A	protein_coding	Intergenic	.	.	Alu	0.307692
16	89724392	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.166667
16	89726263	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.2
16	89726397	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.117647
16	89735038	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.2
16	89742045	A->G	+	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.2
16	89742066	A->G	+	ENSG00000187741	FANCA	protein_coding	Intergenic	.	.	Alu	0.181818
16	89875139	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.142857
16	89878016	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.142857
16	89887070	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.222222
16	89887173	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.142857
16	89888002	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.230769
16	89888052	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.3
16	89888083	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.3
16	89888469	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.166667
16	89888510	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.214286
16	89889226	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.333333
16	89891767	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.137931
16	89891808	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.0714286
16	89973449	A->G	+	ENSG00000223959	AFG3L1P	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.125
16	89973467	A->G	+	ENSG00000223959	AFG3L1P	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.111111
16	89976797	A->G	+	ENSG00000223959	AFG3L1P	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.3
17	12064317	A->G	+	ENSG00000065559	MAP2K4	protein_coding	Intergenic	.	.	Alu	0.571429
17	13010206	A->G	-	ENSG00000006744	ELAC2	protein_coding	Intergenic	.	.	Alu	0.166667
17	13010231	A->G	-	ENSG00000006744	ELAC2	protein_coding	Intergenic	.	.	Alu	0.785714
17	15529446	A->G	-	ENSG00000175106	TVP23C	protein_coding	Intergenic	.	.	Alu	0.454545
17	16012800	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.117647
17	16013093	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.153846
17	16013097	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.153846
17	16013130	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.285714
17	16018619	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.333333
17	16018705	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.272727
17	16020692	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.6
17	16020693	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.4
17	16051700	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.125
17	16051707	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.117647
17	16051709	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.466667
17	16051729	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
17	16051749	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.166667
17	16052253	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.4
17	16054426	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.111111
17	16054453	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.1
17	16054459	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.111111
17	16054498	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
17	16054510	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
17	16136216	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intergenic	.	.	Alu	0.333333
17	17256724	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.230769
17	17258436	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.2
17	17266581	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.117647
17	17267472	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.117647
17	17277478	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.166667
17	17278099	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.230769
17	17829737	A->G	-	ENSG00000072310	SREBF1	protein_coding	Intergenic	.	.	Alu	0.2
17	17829742	A->G	-	ENSG00000072310	SREBF1	protein_coding	Intergenic	.	.	Alu	0.2
17	18273843	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.153846
17	18321584	A->G	+	ENSG00000176994	SMCR8	protein_coding	Intergenic	.	.	Alu	0.166667
17	18321585	A->G	+	ENSG00000176994	SMCR8	protein_coding	Intergenic	.	.	Alu	0.25
17	18321606	A->G	+	ENSG00000176994	SMCR8	protein_coding	Intergenic	.	.	Alu	0.181818
17	18321733	A->G	+	ENSG00000176994	SMCR8	protein_coding	Intergenic	.	.	Alu	0.153846
17	18651641	A->G	+	ENSG00000189375	TBC1D28	protein_coding	Intergenic	.	.	Alu	0.5625
17	21039504	A->G	-	ENSG00000124422	USP22	protein_coding	Intergenic	.	.	Alu	0.176471
17	21292487	A->G	+	ENSG00000034152	MAP2K3	protein_coding	Intergenic	.	.	Alu	0.0952381
17	27297690	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.333333
17	27297691	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.133333
17	28565672	A->G	-	ENSG00000087111	PIGS	protein_coding	Intergenic	.	.	Alu	0.153846
17	28569348	A->G	-	ENSG00000087111	PIGS	protein_coding	Intergenic	.	.	Alu	0.454545
17	28569402	A->G	-	ENSG00000087111	PIGS	protein_coding	Intergenic	.	.	Alu	0.133333
17	28666809	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.117647
17	28667116	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.25
17	28670707	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.111111
17	28803051	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.2
17	28803569	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.181818
17	28803570	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.181818
17	28830751	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.3
17	28831575	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.3
17	28838021	A->G	-	ENSG00000173065	FAM222B	protein_coding	Intergenic	.	.	Alu	0.4
17	28930960	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.181818
17	28930977	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.153846
17	28931055	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.105263
17	28932325	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.181818
17	28932331	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.545455
17	28932413	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.533333
17	28933827	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.133333
17	28942332	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.111111
17	28947046	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.545455
17	28947406	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.277778
17	28947412	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.222222
17	28947421	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.16
17	28947470	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.166667
17	28947502	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.105263
17	28947531	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.190476
17	28947532	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.368421
17	29271454	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.272727
17	29272338	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.25
17	29272379	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29274475	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.133333
17	29277267	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29277284	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29277901	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.214286
17	29277913	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.1875
17	29278518	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.272727
17	29278519	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29279600	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.08
17	29279625	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0740741
17	29279845	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.125
17	29279957	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.3125
17	29279979	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.105263
17	29279983	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.294118
17	29280006	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29280045	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.285714
17	29280091	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.157895
17	29280509	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.12
17	29280768	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	29280829	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
17	29281440	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.125
17	29281456	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29281570	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.12
17	29281576	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.157895
17	29281580	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.1
17	29281916	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29283441	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.230769
17	29288317	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.111111
17	29288318	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0769231
17	29288906	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.193548
17	29288907	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.0645161
17	29288961	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29289000	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29289115	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.217391
17	29289119	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.136364
17	29289124	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.222222
17	29290102	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.208333
17	29290112	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29290117	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.130435
17	29290127	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.173913
17	29290412	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.176471
17	29290429	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.466667
17	29290438	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
17	29290450	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.176471
17	29290452	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.44
17	29290539	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.111111
17	29290586	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.111111
17	29749758	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.133333
17	29749812	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.285714
17	29750674	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.583333
17	29750679	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.166667
17	29751363	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.133333
17	29753161	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.117647
17	29753193	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.333333
17	29755684	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.105263
17	29755697	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29755759	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.181818
17	29755826	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29756690	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.1
17	29756715	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.352941
17	29756723	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.1
17	29756760	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.153846
17	29757925	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.133333
17	29757935	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	29923462	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	30288464	A->G	-	ENSG00000108578	BLMH	protein_coding	Intergenic	.	.	Alu	0.4
17	30485379	A->G	+	ENSG00000108587	GOSR1	protein_coding	Intergenic	.	.	Alu	0.272727
17	30485626	A->G	+	ENSG00000108587	GOSR1	protein_coding	Intergenic	.	.	Alu	0.307692
17	30487850	A->G	+	ENSG00000108587	GOSR1	protein_coding	Intergenic	.	.	Alu	0.2
17	30487978	A->G	+	ENSG00000108587	GOSR1	protein_coding	Intergenic	.	.	Alu	0.181818
17	30487986	A->G	+	ENSG00000108587	GOSR1	protein_coding	Intergenic	.	.	Alu	0.363636
17	30489370	A->G	+	ENSG00000108587	GOSR1	protein_coding	Intergenic	.	.	Alu	0.153846
17	30735362	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.428571
17	30735365	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
17	30735370	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
17	30735436	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
17	30735441	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
17	30735459	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
17	30735460	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
17	30736958	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
17	30737651	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	30737733	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
17	30737783	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.157895
17	30738144	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0952381
17	30745271	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	30745285	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3125
17	30745318	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
17	30745789	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.428571
17	30745792	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.235294
17	30745799	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
17	30745854	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
17	30749504	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	30751050	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
17	30752558	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
17	30752664	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
17	30753948	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
17	30754124	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
17	30754144	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
17	30756648	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	30757814	A->G	+	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.416667
17	30810964	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intergenic	.	.	Alu	0.166667
17	31876949	A->G	-	ENSG00000108651	UTP6	protein_coding	Intergenic	.	.	Alu	0.153846
17	31876950	A->G	-	ENSG00000108651	UTP6	protein_coding	Intergenic	.	.	Alu	0.230769
17	31950052	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.217391
17	31950116	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.333333
17	31950119	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.2
17	31950126	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.25
17	31950910	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.3
17	31953130	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.12
17	31953235	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.0833333
17	31955305	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.142857
17	31955730	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.181818
17	31956981	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.272727
17	31957673	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.166667
17	31958304	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.230769
17	31962511	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.142857
17	31963521	A->G	+	ENSG00000178691	SUZ12	protein_coding	Intergenic	.	.	Alu	0.153846
17	32037181	A->G	+	ENSG00000185158	LRRC37B	protein_coding	Intergenic	.	.	Alu	0.5
17	32037242	A->G	+	ENSG00000185158	LRRC37B	protein_coding	Intergenic	.	.	Alu	0.2
17	32037243	A->G	+	ENSG00000185158	LRRC37B	protein_coding	Intergenic	.	.	Alu	0.2
17	32037255	A->G	+	ENSG00000185158	LRRC37B	protein_coding	Intergenic	.	.	Alu	0.272727
17	32354115	A->G	+	ENSG00000265794	AC005899.4	processed_transcript	Intergenic	.	.	Alu	0.142857
17	32354713	A->G	+	ENSG00000265794	AC005899.4	processed_transcript	Intergenic	.	.	Alu	0.2
17	32390174	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	32447961	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.1875
17	32447981	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.157895
17	32449127	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.210526
17	32449150	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.105263
17	32449176	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.227273
17	32449223	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.352941
17	32449224	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.294118
17	32449240	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.111111
17	32449258	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.133333
17	32449284	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.117647
17	32450097	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.0555556
17	32450141	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.172414
17	32450796	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.115385
17	32450825	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.0645161
17	32451839	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.12
17	32451842	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.08
17	32466231	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.25
17	32466232	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.133333
17	32475663	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.133333
17	32475698	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.111111
17	32475699	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.210526
17	32475716	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.8125
17	32475728	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.166667
17	32475783	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.153846
17	32475814	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.235294
17	32475815	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.3125
17	32475821	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.1875
17	32475845	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.15
17	32475846	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.0952381
17	32476017	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.117647
17	32476054	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.133333
17	32476161	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.25
17	32476189	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.105263
17	32476202	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.222222
17	32476211	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.227273
17	35044493	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.230769
17	35044495	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.384615
17	35048140	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.142857
17	35048213	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.454545
17	35050339	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35050340	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35050476	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35050567	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.142857
17	35050614	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.272727
17	35061773	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35070416	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.176471
17	35076301	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.363636
17	35078378	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.583333
17	35078775	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.153846
17	35078814	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35078832	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35078836	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.3
17	35078880	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35079217	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.166667
17	35084195	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35084422	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.25
17	35084810	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.181818
17	35084813	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35085558	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.2
17	35085567	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.3
17	35085568	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.5
17	35086425	A->G	-	ENSG00000092871	RFFL	protein_coding	Intergenic	.	.	Alu	0.103448
17	35468785	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.571429
17	35471233	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.133333
17	35471234	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.133333
17	35471330	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.2
17	35604337	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.125
17	35609265	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.2
17	35610219	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.461538
17	35610278	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.133333
17	35610287	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.125
17	35610289	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.235294
17	35610297	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.1875
17	35610313	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.25
17	35628547	A->G	+	ENSG00000006125	AP2B1	protein_coding	Intergenic	.	.	Alu	0.25
17	36548729	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36548734	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36561193	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.153846
17	36561225	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.153846
17	36561375	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.1
17	36562271	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.125
17	36562306	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36566482	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	36566636	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.08
17	36568186	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.2
17	36568192	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.363636
17	36568320	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.1875
17	36568355	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.125
17	36568426	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.133333
17	36568436	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.2
17	36568807	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.434783
17	36568897	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	36568936	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	36568953	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.266667
17	36569148	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.2
17	36569184	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.1
17	36569250	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	36569265	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36569301	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.222222
17	36569361	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.133333
17	36570122	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	36570187	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.173913
17	36570290	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36572536	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.12
17	36572610	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.1875
17	36573193	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.133333
17	36573213	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.647059
17	36575890	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	36576083	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36584455	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.181818
17	36584521	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.230769
17	36584581	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.153846
17	36584590	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.230769
17	36584685	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.153846
17	36584715	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.133333
17	36584722	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.3125
17	36584723	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.6875
17	36584733	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.111111
17	36584843	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.2
17	36584879	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.166667
17	36584898	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.615385
17	36587633	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0606061
17	36587685	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
17	36587737	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0571429
17	36587788	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0588235
17	36587802	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.111111
17	36587812	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.147059
17	36587828	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0416667
17	36587832	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0576923
17	36588618	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.214286
17	36588661	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	36588679	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.192308
17	36588693	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.222222
17	36588700	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intergenic	.	.	Alu	0.142857
17	36956721	A->G	+	ENSG00000275700	AATF	protein_coding	Intergenic	.	.	Alu	0.181818
17	36956722	A->G	+	ENSG00000275700	AATF	protein_coding	Intergenic	.	.	Alu	0.2
17	36956748	A->G	+	ENSG00000275700	AATF	protein_coding	Intergenic	.	.	Alu	0.181818
17	36959064	A->G	+	ENSG00000275700	AATF	protein_coding	Intergenic	.	.	Alu	0.4
17	37623330	A->G	-	ENSG00000278053	DDX52	protein_coding	Intergenic	.	.	Alu	0.4
17	37634881	A->G	-	ENSG00000278053	DDX52	protein_coding	Intergenic	.	.	Alu	0.3
17	38493288	A->G	+	ENSG00000275832	ARHGAP23	protein_coding	Intergenic	.	.	Alu	0.3
17	38505908	A->G	+	ENSG00000275832	ARHGAP23	protein_coding	Intergenic	.	.	Alu	0.2
17	38756582	A->G	+	ENSG00000277791	PSMB3	protein_coding	Intergenic	.	.	Alu	0.272727
17	38899998	A->G	+	ENSG00000002834	LASP1	protein_coding	Intergenic	.	.	Alu	0.166667
17	38900283	A->G	+	ENSG00000002834	LASP1	protein_coding	Intergenic	.	.	Alu	0.166667
17	38909551	A->G	+	ENSG00000002834	LASP1	protein_coding	Intergenic	.	.	Alu	0.181818
17	38909877	A->G	+	ENSG00000002834	LASP1	protein_coding	Intergenic	.	.	Alu	0.153846
17	38909987	A->G	+	ENSG00000002834	LASP1	protein_coding	Intergenic	.	.	Alu	0.117647
17	38910826	A->G	+	ENSG00000002834	LASP1	protein_coding	Intergenic	.	.	Alu	0.181818
17	38910827	A->G	+	ENSG00000002834	LASP1	protein_coding	Intergenic	.	.	Alu	0.272727
17	39377981	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.818182
17	39386145	A->G	-	ENSG00000108306	FBXL20	protein_coding	Intergenic	.	.	Alu	0.2
17	39472096	A->G	+	ENSG00000167258	CDK12	protein_coding	Intergenic	.	.	Alu	0.8
17	39654351	A->G	+	ENSG00000131748	STARD3	protein_coding	Intergenic	.	.	Alu	0.545455
17	39991778	A->G	+	ENSG00000108344	PSMD3	protein_coding	Intergenic	.	.	Alu	0.25
17	41761561	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.181818
17	41778394	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.3
17	41779153	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.2
17	41779867	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.0952381
17	41779948	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.16
17	41779949	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.16
17	41783385	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.357143
17	41783390	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.25
17	41783420	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.272727
17	41783461	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.230769
17	41783464	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.133333
17	41783552	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.454545
17	41783664	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.714286
17	41783676	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.4
17	41783677	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.15
17	41783678	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.2
17	41783803	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.2
17	41783807	A->G	-	ENSG00000173801	JUP	protein_coding	Intergenic	.	.	Alu	0.5
17	41851723	A->G	-	.	.	.	Intergenic	.	.	Alu	0.206897
17	41851789	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	41851799	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	41851864	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
17	41852117	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0540541
17	41852130	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
17	41852131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.184211
17	41852176	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	41852185	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
17	41852197	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	41852213	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	41852216	A->G	-	.	.	.	Intergenic	.	.	Alu	0.45
17	41852243	A->G	-	.	.	.	Intergenic	.	.	Alu	0.217391
17	41852283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	41852289	A->G	-	.	.	.	Intergenic	.	.	Alu	0.388889
17	41852290	A->G	-	.	.	.	Intergenic	.	.	Alu	0.611111
17	41852308	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
17	41852325	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
17	41852534	A->G	-	.	.	.	Intergenic	.	.	Alu	0.75
17	41852556	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	41852608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	41852611	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	41852642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
17	41852643	A->G	-	.	.	.	Intergenic	.	.	Alu	0.533333
17	41852691	A->G	-	.	.	.	Intergenic	.	.	Alu	0.242424
17	41852708	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
17	41982762	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.25
17	41982884	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.1875
17	41986289	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.2
17	42005776	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.117647
17	42006250	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.272727
17	42008190	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.181818
17	42012240	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.3
17	42145676	A->G	-	ENSG00000267261	AC099811.2	protein_coding	Intergenic	.	.	Alu	0.166667
17	42150255	A->G	-	ENSG00000267261	AC099811.2	protein_coding	Intergenic	.	.	Alu	0.153846
17	42270146	A->G	-	ENSG00000173757	STAT5B	protein_coding	Intergenic	.	.	Alu	0.181818
17	42270147	A->G	-	ENSG00000173757	STAT5B	protein_coding	Intergenic	.	.	Alu	0.166667
17	42270152	A->G	-	ENSG00000173757	STAT5B	protein_coding	Intergenic	.	.	Alu	0.181818
17	42301594	A->G	+	ENSG00000126561	STAT5A	protein_coding	Intergenic	.	.	Alu	0.461538
17	42301603	A->G	+	ENSG00000126561	STAT5A	protein_coding	Intergenic	.	.	Alu	0.642857
17	42301618	A->G	+	ENSG00000126561	STAT5A	protein_coding	Intergenic	.	.	Alu	0.368421
17	42302705	A->G	+	ENSG00000126561	STAT5A	protein_coding	Intergenic	.	.	Alu	0.625
17	42302714	A->G	+	ENSG00000126561	STAT5A	protein_coding	Intergenic	.	.	Alu	0.15
17	42318026	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.153846
17	42318068	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.117647
17	42320513	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42328476	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.125
17	42348952	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.153846
17	42349004	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.142857
17	42349006	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.214286
17	42351048	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.181818
17	42352084	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42363582	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42366576	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42372747	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.2
17	42376832	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42377370	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.214286
17	42380813	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.166667
17	42380830	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.214286
17	42380837	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.181818
17	42383478	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.111111
17	42384715	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.153846
17	42384749	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.153846
17	42386691	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.09375
17	43222197	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.545455
17	43226508	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.333333
17	43497488	A->G	+	ENSG00000067596	DHX8	protein_coding	Intergenic	.	.	Alu	0.25
17	43497658	A->G	+	ENSG00000067596	DHX8	protein_coding	Intergenic	.	.	Alu	0.230769
17	43498684	A->G	+	ENSG00000067596	DHX8	protein_coding	Intergenic	.	.	Alu	0.25
17	43501668	A->G	+	ENSG00000067596	DHX8	protein_coding	Intergenic	.	.	Alu	0.181818
17	43502289	A->G	+	ENSG00000067596	DHX8	protein_coding	Intergenic	.	.	Alu	0.2
17	43502297	A->G	+	ENSG00000067596	DHX8	protein_coding	Intergenic	.	.	Alu	0.3
17	43502298	A->G	+	ENSG00000067596	DHX8	protein_coding	Intergenic	.	.	Alu	0.2
17	44094995	A->G	-	ENSG00000108840	HDAC5	protein_coding	Intergenic	.	.	Alu	0.352941
17	44095014	A->G	-	ENSG00000108840	HDAC5	protein_coding	Intergenic	.	.	Alu	0.1875
17	44104155	A->G	-	ENSG00000108840	HDAC5	protein_coding	Intergenic	.	.	Alu	0.153846
17	44107238	A->G	-	ENSG00000108840	HDAC5	protein_coding	Intergenic	.	.	Alu	0.454545
17	44208175	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.176471
17	44208201	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.142857
17	44208242	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.263158
17	44208252	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.0952381
17	44208268	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.111111
17	44209037	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.111111
17	44444556	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.3
17	44446508	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.153846
17	44449423	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.133333
17	44454278	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.2
17	44454322	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.153846
17	44454342	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.181818
17	44454650	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.153846
17	44454696	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.1
17	44454704	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.263158
17	44455474	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.2
17	44455487	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.181818
17	44456324	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.2
17	44456328	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.2
17	44456362	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.272727
17	44456531	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.125
17	44456552	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.25
17	44457717	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.133333
17	44458611	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.181818
17	44458614	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.181818
17	44458750	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.25
17	44458766	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.0769231
17	44461326	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.1
17	44463209	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.125
17	44478458	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.133333
17	44478655	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.142857
17	44478836	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.166667
17	44478871	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.117647
17	44481180	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.166667
17	44489045	A->G	-	ENSG00000186566	GPATCH8	protein_coding	Intergenic	.	.	Alu	0.153846
17	44680974	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.1875
17	44681179	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.153846
17	44873416	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.222222
17	44873453	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.166667
17	44873494	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.166667
17	44874312	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.142857
17	44875148	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.181818
17	45068708	A->G	+	ENSG00000136448	NMT1	protein_coding	Intergenic	.	.	Alu	0.117647
17	45068724	A->G	+	ENSG00000136448	NMT1	protein_coding	Intergenic	.	.	Alu	0.357143
17	45095752	A->G	+	ENSG00000136448	NMT1	protein_coding	Intergenic	.	.	Alu	0.272727
17	45301990	A->G	-	ENSG00000006062	MAP3K14	protein_coding	Intergenic	.	.	Alu	0.2
17	45308913	A->G	-	ENSG00000006062	MAP3K14	protein_coding	Intergenic	.	.	Alu	0.181818
17	45467147	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.181818
17	45467148	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.454545
17	45467220	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.181818
17	45467516	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.727273
17	45470505	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.25
17	45470823	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.2
17	45505643	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
17	45505674	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	45505704	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
17	45505720	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	45538336	A->G	-	ENSG00000214425	LRRC37A4P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
17	45573674	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
17	45574233	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	45574260	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16129
17	45574263	A->G	-	.	.	.	Intergenic	.	.	Alu	0.193548
17	45574321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.151515
17	45574324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.393939
17	45574803	A->G	-	.	.	.	Intergenic	.	.	Alu	0.764706
17	45574914	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	45575585	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
17	45575586	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
17	45575637	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0810811
17	45575643	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0555556
17	45576073	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	45576103	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
17	45576107	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
17	45576110	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
17	45577431	A->G	-	.	.	.	Intergenic	.	.	Alu	0.703704
17	45577458	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
17	45579743	A->G	-	.	.	.	Intergenic	.	.	Alu	0.725
17	45580923	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	45581561	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	45582922	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	45583394	A->G	-	.	.	.	Intergenic	.	.	Alu	0.8125
17	45583824	A->G	-	.	.	.	Intergenic	.	.	Alu	1
17	45585764	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	46047662	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.181818
17	46047679	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.5
17	46102514	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.2
17	46105835	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.3
17	46112522	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.25
17	46112537	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.307692
17	46112563	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.166667
17	46112573	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.190476
17	46112602	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.105263
17	46112603	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.105263
17	46112987	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.153846
17	46147348	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.1
17	46148859	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.1
17	46155430	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0769231
17	46155437	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.08
17	46156131	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0645161
17	46158669	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0882353
17	46158673	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.117647
17	46160460	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.230769
17	46160469	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.09375
17	46160497	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0645161
17	46165007	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.05
17	46165025	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.05
17	46165031	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0769231
17	46165055	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.538462
17	46165085	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.09375
17	46165365	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.1
17	46165371	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.363636
17	46165607	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.2
17	46166130	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.2
17	46166131	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.3
17	46166183	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.1875
17	46166295	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0666667
17	46166329	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.222222
17	46166349	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.384615
17	46168390	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0740741
17	46168444	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0833333
17	46170060	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.0689655
17	46170144	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.315789
17	46170146	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.210526
17	46186261	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.181818
17	46186331	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intergenic	.	.	Alu	0.3125
17	46489539	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
17	46489586	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
17	46489603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	46497990	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	46500924	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	46500925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
17	46500973	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	46500994	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
17	46501079	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
17	46501355	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	46501358	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	46501410	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
17	46501449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	46502313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
17	46502359	A->G	+	.	.	.	Intergenic	.	.	Alu	0.809524
17	46502367	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
17	46502431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
17	46532850	A->G	-	ENSG00000238083	LRRC37A2	protein_coding	Intergenic	.	.	Alu	0.52381
17	46532856	A->G	-	ENSG00000238083	LRRC37A2	protein_coding	Intergenic	.	.	Alu	0.181818
17	46532879	A->G	-	ENSG00000238083	LRRC37A2	protein_coding	Intergenic	.	.	Alu	0.235294
17	46532880	A->G	-	ENSG00000238083	LRRC37A2	protein_coding	Intergenic	.	.	Alu	0.1875
17	46535174	A->G	-	ENSG00000238083	LRRC37A2	protein_coding	Intergenic	.	.	Alu	0.384615
17	46535176	A->G	-	ENSG00000238083	LRRC37A2	protein_coding	Intergenic	.	.	Alu	0.384615
17	47155853	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.272727
17	47164606	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.0909091
17	47164632	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.176471
17	47164695	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.230769
17	47169562	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.25
17	47178451	A->G	-	ENSG00000004897	CDC27	protein_coding	Intergenic	.	.	Alu	0.133333
17	47532559	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.181818
17	47546305	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.25
17	47569893	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.333333
17	47590268	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.181818
17	47599849	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.133333
17	47599876	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.333333
17	47599898	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.3
17	47599921	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.2
17	47600178	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.9
17	47600255	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.133333
17	47600280	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.333333
17	47600968	A->G	+	ENSG00000141279	NPEPPS	protein_coding	Intergenic	.	.	Alu	0.125
17	47674135	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intergenic	.	.	Alu	0.235294
17	47674140	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intergenic	.	.	Alu	0.75
17	47674201	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intergenic	.	.	Alu	0.285714
17	48872601	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	48924017	A->G	+	ENSG00000159202	UBE2Z	protein_coding	Intergenic	.	.	Alu	0.272727
17	48943352	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.181818
17	48943492	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.117647
17	48943513	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.238095
17	48943514	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.0952381
17	48943525	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.157895
17	49810357	A->G	+	ENSG00000136504	KAT7	protein_coding	Intergenic	.	.	Alu	0.2
17	50724286	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.105263
17	50724321	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.107143
17	50724365	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0789474
17	50724366	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0540541
17	50724400	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.1
17	50724453	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50727926	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.2
17	50728622	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.125
17	50728647	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.117647
17	50728683	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.133333
17	50728693	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.133333
17	50728822	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.210526
17	50734504	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.105263
17	50734556	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.125
17	50735040	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.153846
17	50735525	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0952381
17	50735569	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.142857
17	50735585	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.571429
17	50735605	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.352941
17	50735606	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.473684
17	50735708	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.722222
17	50735718	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.555556
17	50735732	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.210526
17	50735772	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.105263
17	50735861	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.2
17	50735877	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.666667
17	50735878	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.416667
17	50735883	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.461538
17	50735972	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50735977	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.333333
17	50735980	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50736397	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0833333
17	50741816	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.107143
17	50741830	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.129032
17	50741884	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.0714286
17	50741902	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.133333
17	50741903	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.125
17	50741995	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.588235
17	50998147	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.3
17	51023829	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51032234	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.125
17	51032235	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.133333
17	51032301	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.272727
17	51032701	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.285714
17	51032790	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51032796	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.384615
17	51032797	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51032851	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.416667
17	51032852	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51032877	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51037465	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.333333
17	51037501	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.125
17	51037537	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.142857
17	51037550	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.307692
17	51040018	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.117647
17	51049733	A->G	-	ENSG00000249870	AC005920.2	antisense	Intergenic	.	.	Alu	0.2
17	51190308	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.0833333
17	51190316	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.130435
17	51190375	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.125
17	51251844	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.363636
17	51251958	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.142857
17	57419636	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
17	57428362	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.181818
17	57457565	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.25
17	57460230	A->G	+	ENSG00000153944	MSI2	protein_coding	Intergenic	.	.	Alu	0.2
17	58274637	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.142857
17	58274654	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.166667
17	58274663	A->G	-	ENSG00000005381	MPO	protein_coding	Intergenic	.	.	Alu	0.307692
17	58341266	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.125
17	58341291	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.230769
17	58341343	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.117647
17	58342863	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.1
17	58343050	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.25
17	58343062	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.125
17	58343071	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.111111
17	58343233	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0952381
17	58343326	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.181818
17	58343331	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.181818
17	59580935	A->G	+	ENSG00000108406	DHX40	protein_coding	Intergenic	.	.	Alu	0.153846
17	59581064	A->G	+	ENSG00000108406	DHX40	protein_coding	Intergenic	.	.	Alu	0.2
17	59693244	A->G	+	ENSG00000141378	PTRH2	protein_coding	Intergenic	.	.	Alu	0.3
17	59693279	A->G	+	ENSG00000141378	PTRH2	protein_coding	Intergenic	.	.	Alu	0.181818
17	59736918	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.0740741
17	59747836	A->G	+	ENSG00000062716	VMP1	protein_coding	Intergenic	.	.	Alu	0.2
17	59894674	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.1
17	59894794	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.105263
17	59894814	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	59899896	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.2
17	59899927	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.105263
17	59900466	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.133333
17	59901833	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.133333
17	59902205	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.142857
17	59902290	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.153846
17	59902310	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.25
17	59902680	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.2
17	59906630	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.2
17	59907561	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.142857
17	59908332	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.25
17	59908338	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.2
17	59909092	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.153846
17	59909093	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.153846
17	59911073	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.25
17	59936604	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.235294
17	59936613	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.125
17	59936660	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.133333
17	59936664	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.230769
17	59936695	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.6
17	59936987	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.266667
17	59936993	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.133333
17	59936999	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.461538
17	59937043	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.454545
17	59937067	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.2
17	59942074	A->G	+	ENSG00000267318	AC005702.1	protein_coding	Intergenic	.	.	Alu	0.181818
17	59944499	A->G	+	ENSG00000267318	AC005702.1	protein_coding	Intergenic	.	.	Alu	0.25
17	59945064	A->G	+	ENSG00000267318	AC005702.1	protein_coding	Intergenic	.	.	Alu	0.153846
17	60521038	A->G	-	ENSG00000062725	APPBP2	protein_coding	Intergenic	.	.	Alu	0.3
17	60523411	A->G	-	ENSG00000062725	APPBP2	protein_coding	Intergenic	.	.	Alu	0.153846
17	61970866	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.230769
17	61970903	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.133333
17	61970906	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.133333
17	61970989	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	61971436	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.454545
17	61971437	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.272727
17	61971464	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.142857
17	61971491	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.230769
17	61971505	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.3
17	62000039	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.272727
17	62024675	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.3
17	62028652	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	62037786	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.125
17	62037846	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.142857
17	62037872	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.214286
17	62038268	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62038893	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.333333
17	62038901	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.285714
17	62038902	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.136364
17	62039350	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	62040009	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0952381
17	62040030	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.105263
17	62041648	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	62041674	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.266667
17	62041684	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.153846
17	62041732	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.411765
17	62041810	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.08
17	62041815	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	62041816	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0833333
17	62041833	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.1875
17	62041855	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.6
17	62041856	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.48
17	62041872	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.263158
17	62042307	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.125
17	62042374	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.181818
17	62042399	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.125
17	62042440	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.142857
17	62042450	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.153846
17	62042486	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.3125
17	62042539	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	62042915	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.173913
17	62042939	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.208333
17	62043012	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.117647
17	62043069	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0952381
17	62043072	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.1
17	62043120	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.166667
17	62045441	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.1
17	62046751	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.538462
17	62046754	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.230769
17	62046755	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	62046984	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.666667
17	62047007	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0909091
17	62047126	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0869565
17	62047127	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.0869565
17	62047154	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.111111
17	62047792	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.133333
17	62048171	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.4
17	62060041	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.466667
17	62060047	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.117647
17	62060066	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.307692
17	62060496	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.3
17	62060498	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.5
17	62060520	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.3
17	62060940	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.25
17	62060980	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.333333
17	62475454	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.272727
17	62494318	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62499412	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.272727
17	62499417	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.181818
17	62504985	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62581998	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.214286
17	62582001	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.428571
17	62582047	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62582048	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.133333
17	62582061	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.230769
17	62582068	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.272727
17	62582301	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.1875
17	62582303	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.230769
17	62582349	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.142857
17	62584326	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.166667
17	62584605	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	62589826	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.461538
17	62589830	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.615385
17	62590425	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.0714286
17	62590508	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.142857
17	62590740	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.125
17	62590753	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.153846
17	63642993	A->G	+	ENSG00000198909	MAP3K3	protein_coding	Intergenic	.	.	Alu	0.153846
17	63763122	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.454545
17	63763124	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.545455
17	63763126	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.272727
17	63768453	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.411765
17	63768604	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.166667
17	63768653	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.142857
17	63768660	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.142857
17	63768854	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.105263
17	63770720	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.181818
17	63835153	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.2
17	63835867	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.2
17	63835956	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.130435
17	63835988	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.285714
17	63836008	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.684211
17	63836010	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.105263
17	63836280	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.111111
17	63836321	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.25
17	63836341	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.230769
17	63836374	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.133333
17	63836376	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.142857
17	63836382	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.5
17	63836412	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.1
17	63836416	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.1
17	63836436	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.105263
17	63836442	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.277778
17	63839884	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.105263
17	63839935	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.285714
17	63839944	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.333333
17	63839964	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.181818
17	63840253	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.2
17	63840310	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.181818
17	63840373	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.4
17	63840382	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.153846
17	63840393	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.153846
17	64488451	A->G	-	ENSG00000256525	POLG2	protein_coding	Intergenic	.	.	Alu	0.142857
17	64489644	A->G	-	ENSG00000256525	POLG2	protein_coding	Intergenic	.	.	Alu	0.3
17	64509294	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.357143
17	64509312	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.5
17	64509415	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.538462
17	64520635	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.3
17	64520643	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.2
17	64520667	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.307692
17	64520668	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.285714
17	64520707	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.2
17	64521116	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.916667
17	64521122	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.416667
17	64522050	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.538462
17	64522053	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.416667
17	64522103	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.444444
17	64522112	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.266667
17	64522364	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.0909091
17	64522380	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.0909091
17	64522392	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.269231
17	64522409	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.166667
17	64522458	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.16
17	64522460	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.84
17	64636957	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.266667
17	64639359	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
17	64644073	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.142857
17	64644138	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.25
17	64644422	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.3
17	64644496	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
17	64644513	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.363636
17	64645483	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.142857
17	64645556	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.266667
17	64645706	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.125
17	64645744	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.3
17	64647835	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.125
17	64647838	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.0909091
17	64647940	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
17	64648660	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
17	64648740	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.153846
17	64648751	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.166667
17	64653644	A->G	-	ENSG00000108854	SMURF2	protein_coding	Intergenic	.	.	Alu	0.2
17	64809515	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
17	64809519	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
17	64809520	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
17	64810050	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
17	64813879	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
17	64816685	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
17	64816727	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
17	64817480	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.454545
17	64817490	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
17	64817543	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.318182
17	64817560	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
17	64817569	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
17	64817572	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
17	64817604	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.136364
17	64817618	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0869565
17	65015004	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0714286
17	65015022	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.146341
17	65015023	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0952381
17	65015045	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0810811
17	65015049	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.119048
17	65015066	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0882353
17	65015403	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0576923
17	65015418	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.108696
17	65015473	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.128205
17	65015541	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0869565
17	65015611	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.111111
17	65016505	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0666667
17	65016525	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0465116
17	65016566	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0465116
17	65016634	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.106383
17	65016635	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0638298
17	65038320	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.285714
17	65038340	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.230769
17	65043566	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.272727
17	65044022	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.111111
17	65052861	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.153846
17	65052864	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.272727
17	65052879	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.2
17	65052883	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.272727
17	67134133	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.4
17	67172643	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.0952381
17	67172675	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.181818
17	67172676	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.181818
17	67172878	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.1875
17	67176671	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.25
17	67177232	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.315789
17	67190908	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.0909091
17	67207860	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.133333
17	67207861	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.2
17	67207887	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.142857
17	67207893	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.142857
17	67215022	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.181818
17	67215035	A->G	-	ENSG00000198265	HELZ	protein_coding	Intergenic	.	.	Alu	0.454545
17	67342828	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.272727
17	67342852	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.142857
17	67342853	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67348752	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.08
17	67348753	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.16
17	67348754	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.115385
17	67348763	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.08
17	67348856	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.117647
17	67348873	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.388889
17	67348874	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.277778
17	67348884	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1875
17	67348982	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.5
17	67351940	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0833333
17	67352237	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.272727
17	67352241	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67352257	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.142857
17	67353483	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0909091
17	67353586	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.142857
17	67354197	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.48
17	67354243	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67354311	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67354324	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.304348
17	67354327	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0909091
17	67354334	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.133333
17	67354358	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.428571
17	67354746	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0731707
17	67354764	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0666667
17	67354772	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67354824	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0571429
17	67354841	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0789474
17	67355285	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0606061
17	67355871	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.25
17	67358018	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.3
17	67358021	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.809524
17	67358060	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.8
17	67358086	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.129032
17	67358102	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.08
17	67358142	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67358196	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.266667
17	67358309	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67358311	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.6875
17	67358322	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.5
17	67358323	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67358350	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.08
17	67358376	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.384615
17	67358381	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.5
17	67358419	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0769231
17	67358420	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67358424	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.192308
17	67358440	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67358444	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0909091
17	67358446	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0909091
17	67358461	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.285714
17	67358521	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67358537	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.727273
17	67359206	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.05
17	67359207	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0512821
17	67363235	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67363300	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.105263
17	67363387	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67363388	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67363858	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0869565
17	67364044	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.08
17	67364967	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0588235
17	67365068	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.111111
17	67365072	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.157895
17	67365138	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67392424	A->G	+	ENSG00000154217	PITPNC1	protein_coding	Intergenic	.	.	Alu	0.272727
17	67392425	A->G	+	ENSG00000154217	PITPNC1	protein_coding	Intergenic	.	.	Alu	0.166667
17	67393985	A->G	+	ENSG00000154217	PITPNC1	protein_coding	Intergenic	.	.	Alu	0.2
17	67394100	A->G	+	ENSG00000154217	PITPNC1	protein_coding	Intergenic	.	.	Alu	0.166667
17	67395274	A->G	+	ENSG00000154217	PITPNC1	protein_coding	Intergenic	.	.	Alu	0.25
17	67395280	A->G	+	ENSG00000154217	PITPNC1	protein_coding	Intergenic	.	.	Alu	0.272727
17	67395412	A->G	+	ENSG00000154217	PITPNC1	protein_coding	Intergenic	.	.	Alu	0.181818
17	67880660	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.181818
17	67906353	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.3
17	67907110	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.6
17	67907473	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.357143
17	67907481	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.375
17	67907536	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.181818
17	67907537	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.181818
17	67907578	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.181818
17	67909220	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.111111
17	68121492	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	73204103	A->G	+	ENSG00000166685	COG1	protein_coding	Intergenic	.	.	Alu	0.125
17	73204147	A->G	+	ENSG00000166685	COG1	protein_coding	Intergenic	.	.	Alu	0.181818
17	73204148	A->G	+	ENSG00000166685	COG1	protein_coding	Intergenic	.	.	Alu	0.0909091
17	73204151	A->G	+	ENSG00000166685	COG1	protein_coding	Intergenic	.	.	Alu	0.142857
17	73224358	A->G	-	ENSG00000133193	FAM104A	protein_coding	Intergenic	.	.	Alu	0.2
17	74208763	A->G	+	ENSG00000172809	RPL38	protein_coding	Intergenic	.	.	Alu	0.142857
17	74208886	A->G	+	ENSG00000172809	RPL38	protein_coding	Intergenic	.	.	Alu	0.2
17	74766652	A->G	+	ENSG00000109062	SLC9A3R1	protein_coding	Intergenic	.	.	Alu	0.583333
17	74766654	A->G	+	ENSG00000109062	SLC9A3R1	protein_coding	Intergenic	.	.	Alu	0.615385
17	74766660	A->G	+	ENSG00000109062	SLC9A3R1	protein_coding	Intergenic	.	.	Alu	0.230769
17	74782168	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.3
17	74782248	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.5
17	74782251	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.272727
17	75104514	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.153846
17	75104520	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.133333
17	75104546	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.133333
17	75146348	A->G	-	ENSG00000263786	AC022211.1	sense_intronic	Intergenic	.	.	Alu	0.2
17	75176533	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.357143
17	75176534	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75178733	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.08
17	75179406	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75179838	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.466667
17	75179839	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.142857
17	75179840	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.4
17	75322312	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75322875	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75322997	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0952381
17	75323072	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.3
17	75323906	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75330351	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.263158
17	75351506	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75356260	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.384615
17	75356400	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75356426	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.230769
17	75366564	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.153846
17	75366682	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0833333
17	75366686	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.08
17	75366688	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.08
17	75368683	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.1
17	75368748	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.111111
17	75368767	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.105263
17	75368768	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.111111
17	75368792	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.08
17	75368818	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0769231
17	75368821	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.0769231
17	75374317	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75374352	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.5
17	75374485	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.1
17	75374881	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.448276
17	75375011	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.142857
17	75375020	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.125
17	75375040	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.111111
17	75375044	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.222222
17	75375135	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.142857
17	75375181	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.285714
17	75375189	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.3
17	75376836	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.277778
17	75379537	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.3
17	75379599	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.125
17	75379619	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.117647
17	75383847	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.384615
17	75387253	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75388653	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.2
17	75388696	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.133333
17	75599159	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.166667
17	75599172	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.166667
17	75599174	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.181818
17	75601172	A->G	+	ENSG00000266714	MYO15B	protein_coding	Intergenic	.	.	Alu	0.181818
17	75674805	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.125
17	75675207	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.230769
17	75682709	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.142857
17	75682798	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.181818
17	75682801	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.166667
17	75682820	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.25
17	75682843	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.2
17	75690458	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.214286
17	75787324	A->G	+	ENSG00000132478	UNK	protein_coding	Intergenic	.	.	Alu	0.3
17	75790393	A->G	+	ENSG00000132478	UNK	protein_coding	Intergenic	.	.	Alu	0.25
17	75790449	A->G	+	ENSG00000132478	UNK	protein_coding	Intergenic	.	.	Alu	0.142857
17	75902375	A->G	-	ENSG00000204316	MRPL38	protein_coding	Intergenic	.	.	Alu	0.3
17	76717630	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.133333
17	76717674	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.1875
17	76719896	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.2
17	76722589	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.130435
17	76722595	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.178571
17	76722629	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.157895
17	76722810	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.142857
17	76723048	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.2
17	76723164	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0952381
17	76724183	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0909091
17	76724199	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.1
17	76724282	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.172414
17	76724286	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.133333
17	76724330	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0689655
17	76724349	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0967742
17	76724367	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.1
17	76724416	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0689655
17	76725192	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76725264	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.25
17	76725296	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.153846
17	76725323	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.153846
17	76727462	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.133333
17	76727811	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.181818
17	76728093	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.166667
17	77152045	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.153846
17	77152075	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.125
17	77152090	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.384615
17	77152280	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.4
17	77152281	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.636364
17	77152415	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.3
17	77152416	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.2
17	77200321	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.3
17	77200371	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.666667
17	77200378	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.133333
17	77970958	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.142857
17	77976655	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.181818
17	77976809	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.153846
17	78379953	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.5
17	78379960	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.4
17	78404480	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.2
17	78404765	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78404790	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.4
17	78422522	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.5
17	78422530	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.6875
17	78422597	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78422598	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.307692
17	78422709	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.384615
17	78422897	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.230769
17	78422912	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.357143
17	78422940	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78422941	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78422949	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78423038	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.307692
17	78689474	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.214286
17	78699846	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78702897	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.428571
17	78702950	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78703300	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.214286
17	78703329	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.272727
17	78703380	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.363636
17	78720718	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.117647
17	78720750	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.214286
17	78720766	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.461538
17	78720869	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.615385
17	78728423	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78728430	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78734020	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78749305	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78749312	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78749591	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.125
17	78751069	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.1
17	78751081	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78751172	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78753209	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78754571	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78755713	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78755811	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78755854	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78755864	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.272727
17	78755867	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.384615
17	78756783	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.125
17	78757696	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78757728	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.210526
17	78757748	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.181818
17	78763867	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.3125
17	78769825	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78769987	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.117647
17	78770034	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.388889
17	78770037	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.235294
17	78770038	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.176471
17	78770087	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	78770202	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.1875
17	78770224	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.125
17	78770481	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0645161
17	78770486	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0606061
17	78770507	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.09375
17	78770524	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0625
17	78770557	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78770583	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.285714
17	78770596	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0769231
17	78770601	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.15
17	78770612	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.210526
17	78770635	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	78770645	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.176471
17	78770650	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.111111
17	78771210	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.153846
17	78771256	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.0952381
17	78773219	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.2
17	78773222	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.125
17	78773282	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.2
17	78816220	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.111111
17	78816228	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.117647
17	78816271	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.571429
17	78816298	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.583333
17	78834139	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.1
17	78834584	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.2
17	78985013	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
17	80292342	A->G	+	ENSG00000173821	RNF213	protein_coding	Intergenic	.	.	Alu	0.166667
17	81560955	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
17	81590619	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
17	81590625	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
17	81591297	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
17	81595309	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.357143
17	81601457	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.153846
17	81610475	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
17	81634946	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.153846
17	81636070	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
17	81856912	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.307692
17	81857056	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.153846
17	81857413	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.2
17	81857416	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.133333
17	81881229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
17	81881230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
17	81881294	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
17	81881341	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	81881351	A->G	-	.	.	.	Intergenic	.	.	Alu	0.9
17	81881425	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
17	81881441	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
17	81886709	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
17	82094654	A->G	-	ENSG00000169710	FASN	protein_coding	Intergenic	.	.	Alu	0.111111
17	82256293	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.125
17	82256299	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.0740741
17	82256339	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.0833333
17	82256391	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.12
17	82256430	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.25
17	82257084	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.190476
17	82257098	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.0909091
17	82258112	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.16
17	82258160	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.125
17	82265036	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.133333
17	82265071	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.173913
17	82265072	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.173913
17	82265276	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.153846
17	82460939	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.909091
17	82460947	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.5
17	82460953	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.666667
17	82461041	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.166667
17	82461044	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.210526
17	82461054	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.578947
17	82461411	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.166667
17	82461430	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.125
17	82461482	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.111111
17	82461491	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.631579
17	82461532	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.615385
17	82466556	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.111111
17	82466557	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.176471
17	82466565	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.214286
17	82467146	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.117647
17	82467147	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.117647
17	82467150	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.125
17	82467531	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.166667
17	82467538	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.181818
17	82467756	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.1875
17	82467778	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.1875
17	82468056	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.5
17	82468057	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.625
17	82468374	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.142857
17	82482873	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.2
17	82620199	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.25
17	82621227	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.230769
17	82626423	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.5
17	82626447	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.142857
17	82626450	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.214286
17	82628025	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.25
17	82628026	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.5
17	82628060	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.384615
17	82628077	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.214286
17	82628113	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.588235
17	82628218	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.2
17	82628482	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.363636
17	82628645	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.214286
17	82628659	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.214286
17	82628743	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.25
18	11889691	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intergenic	.	.	Alu	0.2
18	11889719	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intergenic	.	.	Alu	0.272727
18	11905299	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intergenic	.	.	Alu	0.3
18	12310376	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.266667
18	12310550	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.6
18	12310555	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12310605	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.181818
18	12310609	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.8
18	12310741	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.4375
18	12310750	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.4
18	12310763	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.153846
18	12311542	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0833333
18	12312750	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.111111
18	12316934	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.153846
18	12317213	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.25
18	12317234	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0952381
18	12317358	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0869565
18	12317377	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.08
18	12317428	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.230769
18	12318857	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.214286
18	12318858	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.428571
18	12318861	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.142857
18	12318888	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.181818
18	12319692	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.263158
18	12319744	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0869565
18	12319745	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.173913
18	12319746	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0833333
18	12319818	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.5
18	12319867	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12319995	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.230769
18	12322136	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.230769
18	12322139	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.230769
18	12322181	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.333333
18	12322210	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0909091
18	12322223	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.28
18	12322250	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.166667
18	12322258	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12322277	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.12
18	12322278	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.230769
18	12322280	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.115385
18	12322413	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.5
18	12322429	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.136364
18	12322448	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.08
18	12322454	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.115385
18	12322455	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.115385
18	12322472	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.307692
18	12322535	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.115385
18	12322538	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0769231
18	12323078	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.0740741
18	12323765	A->G	+	ENSG00000176014	TUBB6	protein_coding	Intergenic	.	.	Alu	0.2
18	12723564	A->G	+	ENSG00000128789	PSMG2	protein_coding	Intergenic	.	.	Alu	0.142857
18	12723589	A->G	+	ENSG00000128789	PSMG2	protein_coding	Intergenic	.	.	Alu	0.277778
18	12723592	A->G	+	ENSG00000128789	PSMG2	protein_coding	Intergenic	.	.	Alu	0.117647
18	12723666	A->G	+	ENSG00000128789	PSMG2	protein_coding	Intergenic	.	.	Alu	0.08
18	12850273	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.25
18	12856842	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.166667
18	12856843	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.166667
18	12878631	A->G	-	ENSG00000175354	PTPN2	protein_coding	Intergenic	.	.	Alu	0.166667
18	12970521	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.272727
18	12970554	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intergenic	.	.	Alu	0.166667
18	13750571	A->G	+	ENSG00000101654	RNMT	protein_coding	Intergenic	.	.	Alu	0.0952381
18	13750585	A->G	+	ENSG00000101654	RNMT	protein_coding	Intergenic	.	.	Alu	0.142857
18	13750590	A->G	+	ENSG00000101654	RNMT	protein_coding	Intergenic	.	.	Alu	0.117647
18	20994441	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.3
18	21017959	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.5
18	21018382	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.133333
18	21018418	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.111111
18	21018430	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.105263
18	21018447	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.117647
18	21018448	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.117647
18	21018467	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.117647
18	21018468	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.125
18	21019030	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.272727
18	21019184	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.391304
18	21019214	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.15
18	21019216	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.444444
18	21019221	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.125
18	21019227	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	21019239	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.142857
18	21019250	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.111111
18	21019275	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.0833333
18	21019292	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.363636
18	21019343	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.15
18	21019350	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.190476
18	21019358	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.0869565
18	21019364	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	21019373	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.111111
18	21019374	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.222222
18	21019604	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.266667
18	21019612	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.25
18	21025522	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.153846
18	21032788	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.285714
18	21032789	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.133333
18	21032795	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.214286
18	21033000	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.125
18	21033081	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.55
18	21046912	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.166667
18	21060637	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.333333
18	21061298	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21061299	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21061307	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.5
18	21088347	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21090363	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21102717	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.25
18	21102718	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.1875
18	21103597	A->G	-	ENSG00000067900	ROCK1	protein_coding	Intergenic	.	.	Alu	0.166667
18	21528739	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
18	21528744	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
18	21528745	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
18	21528751	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
18	21546623	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.117647
18	21555636	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21563009	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.142857
18	21581527	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.142857
18	21584562	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.214286
18	21584719	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.111111
18	21585737	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21585766	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.181818
18	21588745	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.2
18	21596144	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.133333
18	21596159	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.5
18	21596171	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.157895
18	21596186	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.411765
18	21701266	A->G	-	ENSG00000158201	ABHD3	protein_coding	Intergenic	.	.	Alu	0.0869565
18	23469627	A->G	+	ENSG00000101782	RIOK3	protein_coding	Intergenic	.	.	Alu	0.4
18	23470177	A->G	+	ENSG00000101782	RIOK3	protein_coding	Intergenic	.	.	Alu	0.153846
18	23470251	A->G	+	ENSG00000101782	RIOK3	protein_coding	Intergenic	.	.	Alu	0.1875
18	23480831	A->G	+	ENSG00000101782	RIOK3	protein_coding	Intergenic	.	.	Alu	0.181818
18	23520534	A->G	+	ENSG00000141452	RMC1	protein_coding	Intergenic	.	.	Alu	0.133333
18	23527480	A->G	-	ENSG00000141452	RMC1	protein_coding	Intergenic	.	.	Alu	0.266667
18	23532340	A->G	-	ENSG00000141458	NPC1	protein_coding	Intergenic	.	.	Alu	0.235294
18	23532362	A->G	-	ENSG00000141458	NPC1	protein_coding	Intergenic	.	.	Alu	0.125
18	26078824	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.125
18	26078843	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.142857
18	26079751	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.111111
18	26081367	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.0952381
18	26081392	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.173913
18	26081394	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.0952381
18	26081447	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.142857
18	26081455	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.173913
18	26081463	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.142857
18	26081464	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.0952381
18	26081823	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.333333
18	26081840	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.210526
18	26081847	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.105263
18	26081886	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.285714
18	26081936	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.304348
18	26081963	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.269231
18	26081975	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.178571
18	26081976	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.0714286
18	26082014	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.16
18	26082026	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.0666667
18	26082045	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.25
18	26082050	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.157895
18	32024624	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.4
18	32024669	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.2
18	32032774	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.111111
18	32032791	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.117647
18	32032794	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.117647
18	32039340	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.384615
18	32039342	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.153846
18	32041158	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.545455
18	32044943	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.2
18	32047972	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.105263
18	32047975	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.125
18	32051362	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.125
18	32051438	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.125
18	32051452	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.277778
18	32051807	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.384615
18	32054303	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.25
18	32054367	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0869565
18	32055096	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.153846
18	32058051	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.181818
18	32058052	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.181818
18	32064201	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.214286
18	32104153	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.142857
18	32104210	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.157895
18	32104213	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.105263
18	32108798	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.363636
18	32109698	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.230769
18	32112570	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.3
18	32120079	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.3125
18	32120398	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.277778
18	32120418	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.4375
18	32121938	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.2
18	32122052	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.153846
18	32122129	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.181818
18	32122546	A->G	+	ENSG00000263393	AC011825.2	antisense	Intergenic	.	.	Alu	0.157895
18	35057034	A->G	+	ENSG00000166974	MAPRE2	protein_coding	Intergenic	.	.	Alu	0.153846
18	35496637	A->G	-	ENSG00000267140	AC007998.2	protein_coding	Intergenic	.	.	Alu	0.166667
18	35641061	A->G	+	ENSG00000141429	GALNT1	protein_coding	Intergenic	.	.	Alu	0.3
18	36127482	A->G	-	ENSG00000141424	SLC39A6	protein_coding	Intergenic	.	.	Alu	0.333333
18	36127502	A->G	-	ENSG00000141424	SLC39A6	protein_coding	Intergenic	.	.	Alu	0.230769
18	36127868	A->G	-	ENSG00000141424	SLC39A6	protein_coding	Intergenic	.	.	Alu	0.416667
18	36130977	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.178571
18	36131027	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.15
18	36131053	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.296296
18	36132040	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.238095
18	36132043	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.181818
18	36132050	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.26087
18	36132091	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.1
18	36148174	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.454545
18	36148275	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.166667
18	36148603	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.181818
18	36148604	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.272727
18	36148673	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.25
18	36148677	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.272727
18	36148737	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.166667
18	36148773	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.4
18	36151292	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.272727
18	36165961	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0714286
18	36165976	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.333333
18	36165980	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0689655
18	36166014	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.111111
18	36166029	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0571429
18	36166034	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0833333
18	36166046	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0857143
18	36166072	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0625
18	36166073	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.25
18	36166082	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0645161
18	36166099	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.212121
18	36166113	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.181818
18	36166114	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0869565
18	36166175	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.294118
18	36166177	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.121212
18	36166431	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.166667
18	36166460	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.153846
18	36166470	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.692308
18	36166471	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.153846
18	36166472	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.153846
18	36166512	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.214286
18	36166566	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.545455
18	36166571	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.181818
18	36793942	A->G	-	ENSG00000134779	TPGS2	protein_coding	Intergenic	.	.	Alu	0.0833333
18	42047531	A->G	+	ENSG00000078142	PIK3C3	protein_coding	Intergenic	.	.	Alu	0.214286
18	42047549	A->G	+	ENSG00000078142	PIK3C3	protein_coding	Intergenic	.	.	Alu	0.833333
18	42047554	A->G	+	ENSG00000078142	PIK3C3	protein_coding	Intergenic	.	.	Alu	0.416667
18	45947158	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.3
18	45947170	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.181818
18	45947171	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.181818
18	45953631	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.375
18	46095719	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.133333
18	46096722	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.166667
18	46096760	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.1875
18	46096765	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.125
18	46096920	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.157895
18	46096921	A->G	-	ENSG00000152234	ATP5F1A	protein_coding	Intergenic	.	.	Alu	0.105263
18	46220880	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.0571429
18	46220881	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.0555556
18	47860011	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.384615
18	47860035	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.588235
18	47860050	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.55
18	47860054	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.125
18	47860060	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.521739
18	47860074	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.333333
18	47860079	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.0952381
18	47860120	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.714286
18	47860436	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.571429
18	47860491	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.125
18	47924534	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.2
18	49388082	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.2
18	49388110	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.272727
18	49388315	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.5
18	49389549	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.142857
18	49389589	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.111111
18	49389608	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.217391
18	49389660	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.1
18	49389661	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.1
18	49389747	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.235294
18	49389748	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.294118
18	49389801	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.166667
18	49390164	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.235294
18	49390193	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.333333
18	49390223	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.125
18	49390229	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.733333
18	49390260	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.181818
18	49390308	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.157895
18	49390330	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.307692
18	49390335	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.357143
18	51178663	A->G	-	ENSG00000176624	MEX3C	protein_coding	Intergenic	.	.	Alu	0.2
18	54843003	A->G	+	ENSG00000041353	RAB27B	protein_coding	Intergenic	.	.	Alu	0.272727
18	54844506	A->G	+	ENSG00000041353	RAB27B	protein_coding	Intergenic	.	.	Alu	0.3
18	56607012	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.157895
18	56607020	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.111111
18	56607062	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.111111
18	56607605	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.1
18	56607614	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.157895
18	56607673	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.230769
18	56607747	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.2
18	56612582	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.153846
18	56613091	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.15
18	56613112	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.0833333
18	56613579	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.166667
18	56613584	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.153846
18	56613933	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.133333
18	56613946	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.166667
18	56613950	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.176471
18	56613951	A->G	-	ENSG00000091164	TXNL1	protein_coding	Intergenic	.	.	Alu	0.166667
18	57618657	A->G	-	ENSG00000134440	NARS	protein_coding	Intergenic	.	.	Alu	0.111111
18	57618698	A->G	-	ENSG00000134440	NARS	protein_coding	Intergenic	.	.	Alu	0.230769
18	57619852	A->G	-	ENSG00000134440	NARS	protein_coding	Intergenic	.	.	Alu	0.272727
18	58680002	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0952381
18	58700807	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.181818
18	58700808	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.181818
18	58704479	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.2
18	58704569	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.3
18	58737857	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.142857
18	59144475	A->G	+	ENSG00000166562	SEC11C	protein_coding	Intergenic	.	.	Alu	0.25
18	63396313	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.272727
18	63396318	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.117647
18	63398423	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.133333
18	63398581	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.176471
18	63398603	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.111111
18	63418604	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.153846
18	63418628	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.133333
18	63419330	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.3
18	79119003	A->G	+	ENSG00000166377	ATP9B	protein_coding	Intergenic	.	.	Alu	0.8
18	79685038	A->G	+	ENSG00000060069	CTDP1	protein_coding	Intergenic	.	.	Alu	0.526316
18	79974156	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.142857
18	79983233	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.2
18	79984359	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.157895
18	79984408	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.133333
18	79984496	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.181818
18	79984533	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.2
18	79984746	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.133333
18	79984747	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.142857
18	79984760	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.166667
18	79985384	A->G	-	ENSG00000141759	TXNL4A	protein_coding	Intergenic	.	.	Alu	0.117647
18	80120683	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.133333
18	80122049	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.105263
18	80122069	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.117647
18	80122085	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.166667
18	80128552	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.2
18	80128615	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.2
18	80132824	A->G	+	ENSG00000101544	ADNP2	protein_coding	Intergenic	.	.	Alu	0.3
19	10162542	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.166667
19	10170828	A->G	-	ENSG00000130816	DNMT1	protein_coding	Intergenic	.	.	Alu	0.117647
19	10272076	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.133333
19	10275612	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.142857
19	10275613	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.133333
19	10279649	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.25
19	10280639	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.1875
19	10281799	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10282893	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10282934	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.142857
19	10282945	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.125
19	10282968	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.142857
19	10328359	A->G	-	ENSG00000161847	RAVER1	protein_coding	Intergenic	.	.	Alu	0.2
19	10362952	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.307692
19	10362978	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.272727
19	10363024	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.285714
19	10363051	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.133333
19	10363439	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.461538
19	10364361	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.230769
19	10512240	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	10512242	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
19	10545370	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.230769
19	10545373	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.461538
19	10545497	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.111111
19	10545511	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.133333
19	10546079	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.285714
19	10546420	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.214286
19	10546445	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.2
19	10546446	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.25
19	10546589	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.125
19	10546615	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.133333
19	10546616	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.214286
19	10547507	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.214286
19	10547548	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.153846
19	10547567	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.333333
19	10547776	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.166667
19	10547777	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.333333
19	10549250	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.166667
19	10549257	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.272727
19	10550288	A->G	+	ENSG00000130734	ATG4D	protein_coding	Intergenic	.	.	Alu	0.166667
19	10563088	A->G	-	ENSG00000129347	KRI1	protein_coding	Intergenic	.	.	Alu	0.272727
19	10563093	A->G	-	ENSG00000129347	KRI1	protein_coding	Intergenic	.	.	Alu	0.181818
19	10563118	A->G	-	ENSG00000129347	KRI1	protein_coding	Intergenic	.	.	Alu	0.461538
19	10605121	A->G	+	ENSG00000129353	SLC44A2	protein_coding	Intergenic	.	.	Alu	0.2
19	10605141	A->G	+	ENSG00000129353	SLC44A2	protein_coding	Intergenic	.	.	Alu	0.230769
19	10610026	A->G	+	ENSG00000129353	SLC44A2	protein_coding	Intergenic	.	.	Alu	0.2
19	10657926	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.181818
19	10658023	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.0869565
19	10658034	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.0833333
19	10658037	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.208333
19	10658088	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.222222
19	10658099	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.111111
19	10658174	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.181818
19	10659229	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.214286
19	10659305	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.125
19	10661337	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.272727
19	10663756	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.25
19	10664844	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.142857
19	10667028	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.4
19	10720608	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.181818
19	10722863	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.214286
19	10722879	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.133333
19	10722901	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.105263
19	10727397	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.117647
19	10730073	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.2
19	10735725	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.1875
19	10794648	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.6
19	10794657	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.153846
19	10930367	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.25
19	10930374	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.153846
19	10930629	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.15
19	10930656	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.1
19	10930657	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.0869565
19	10930717	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.08
19	10930770	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.25
19	10930877	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.1
19	10930940	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.1875
19	10963208	A->G	+	ENSG00000127616	SMARCA4	protein_coding	Intergenic	.	.	Alu	0.2
19	11825062	A->G	+	ENSG00000171295	ZNF440	protein_coding	Intergenic	.	.	Alu	0.2
19	11825063	A->G	+	ENSG00000171295	ZNF440	protein_coding	Intergenic	.	.	Alu	0.2
19	11927339	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.181818
19	11928046	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.6
19	11928048	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.181818
19	11928176	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.181818
19	11928222	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.166667
19	11928825	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.2
19	11928842	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.25
19	11928871	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.352941
19	11931838	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.272727
19	11932264	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.181818
19	11932301	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.307692
19	11932323	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.125
19	11933163	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.117647
19	11933175	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.125
19	11933197	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.5
19	11933240	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.2
19	11934087	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.166667
19	11934761	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.2
19	11934770	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.3
19	11934787	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.307692
19	11934800	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.454545
19	11935508	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.230769
19	11939726	A->G	+	ENSG00000196757	ZNF700	protein_coding	Intergenic	.	.	Alu	0.214286
19	12002474	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.4
19	12002780	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.105263
19	12002904	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.1
19	12012148	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.538462
19	12012157	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.533333
19	12012223	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.117647
19	12012484	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.307692
19	12012496	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.133333
19	12012506	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.230769
19	12012546	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
19	12012909	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.214286
19	12012912	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.166667
19	12021193	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.25
19	12021233	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intergenic	.	.	Alu	0.272727
19	12177420	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.214286
19	12183245	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.25
19	12183286	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.181818
19	12283941	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.2
19	12283943	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.3
19	12286391	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.25
19	12286392	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.3125
19	12288509	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.214286
19	12288514	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.615385
19	12290129	A->G	-	ENSG00000197857	ZNF44	protein_coding	Intergenic	.	.	Alu	0.2
19	12627029	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.133333
19	12627030	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.133333
19	12627038	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.214286
19	12627060	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.285714
19	12677699	A->G	-	ENSG00000095059	DHPS	protein_coding	Intergenic	.	.	Alu	0.181818
19	12677703	A->G	-	ENSG00000095059	DHPS	protein_coding	Intergenic	.	.	Alu	0.3
19	12678641	A->G	-	ENSG00000095059	DHPS	protein_coding	Intergenic	.	.	Alu	0.230769
19	12731879	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.208333
19	12731940	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.181818
19	12731943	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.3
19	12731960	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.181818
19	12732793	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.153846
19	12732808	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.142857
19	12732961	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.03125
19	12732972	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.0983607
19	12732980	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.0344828
19	12733105	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.0408163
19	12733141	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.030303
19	12733198	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.0526316
19	12941365	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.05
19	12941536	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.142857
19	12942834	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0857143
19	12942850	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0714286
19	13759677	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.230769
19	13759727	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.133333
19	13759728	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.2
19	13759927	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.357143
19	13759963	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.142857
19	13760001	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.272727
19	13760012	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.363636
19	13760053	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.2
19	13760054	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.466667
19	13760127	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.181818
19	13760136	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.142857
19	13760148	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.166667
19	13760155	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.272727
19	13760625	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.181818
19	13760647	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.181818
19	13760672	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.6
19	14385911	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.2
19	14385973	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.7
19	14386222	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.153846
19	14386227	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
19	14386336	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
19	14389527	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.173913
19	14389681	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14389696	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0833333
19	14390011	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.189189
19	14390021	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0606061
19	14390025	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14390026	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0625
19	14390347	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.153846
19	14390363	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.125
19	14390383	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.269231
19	14390423	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0714286
19	14390424	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.166667
19	14390437	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.304348
19	14390441	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14392641	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14392792	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0909091
19	14392835	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.111111
19	14398554	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.538462
19	14398596	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14398865	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14398866	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.481481
19	14398921	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0810811
19	14398935	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0810811
19	14398942	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0789474
19	14398954	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.135135
19	14398967	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.16129
19	14398968	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0606061
19	14398981	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14398983	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0714286
19	14398987	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0833333
19	14399674	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0645161
19	14399939	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.1
19	14399940	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.206897
19	14399944	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0714286
19	14400282	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
19	14400294	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.2
19	14400365	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.466667
19	14400389	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.5
19	14400542	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.133333
19	14400563	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.117647
19	14400590	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.111111
19	14400591	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.105263
19	14400645	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.210526
19	14401003	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.037037
19	14401017	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0612245
19	14401020	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0416667
19	14401104	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.04
19	14402259	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0555556
19	14402312	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.0517241
19	14403062	A->G	+	ENSG00000267379	AC008569.1	antisense	Intergenic	.	.	Alu	0.0909091
19	14403502	A->G	+	ENSG00000267379	AC008569.1	antisense	Intergenic	.	.	Alu	0.037037
19	14416070	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.2
19	14416722	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.181818
19	14416886	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.166667
19	14418656	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.153846
19	14418689	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.166667
19	15311702	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.214286
19	15311719	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.214286
19	15312813	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.181818
19	15312892	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.133333
19	15312894	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.133333
19	15329037	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.0714286
19	15329040	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.0689655
19	15338396	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	15338435	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
19	15355704	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.230769
19	15355705	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.25
19	15355711	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.3
19	15355771	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.230769
19	15355775	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.153846
19	15356763	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.266667
19	15356764	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.133333
19	15356941	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.3
19	15358458	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.08
19	15358633	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.166667
19	15366562	A->G	-	ENSG00000105127	AKAP8	protein_coding	Intergenic	.	.	Alu	0.166667
19	15386836	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.272727
19	15392033	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.2
19	15392060	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.2
19	15392093	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.5
19	15394574	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.142857
19	15395401	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.153846
19	15395408	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.105263
19	15462135	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.125
19	16077901	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.470588
19	16080539	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.123457
19	16080561	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0487805
19	16080564	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.128205
19	16080596	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0454545
19	16080624	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0612245
19	16080659	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0576923
19	16080660	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0377358
19	16080669	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0652174
19	16080714	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0555556
19	16080754	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.06
19	16081562	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.047619
19	16082323	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.2
19	16082832	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16082833	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16082941	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0909091
19	16083391	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.230769
19	16083810	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.181818
19	16084092	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.2
19	16084103	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.25
19	16084118	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.294118
19	16084134	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.565217
19	16085080	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.15
19	16085182	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0952381
19	16091533	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.136364
19	16091695	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16091724	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16091725	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16093027	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16559558	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.166667
19	16563056	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.25
19	16563076	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.181818
19	16563077	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.363636
19	16563095	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.3
19	16563548	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.166667
19	16563576	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.1
19	16563694	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.176471
19	16563698	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.1875
19	16563708	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.125
19	16563740	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.4375
19	16563760	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.166667
19	16569251	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.25
19	16569666	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.6
19	16569674	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.2
19	16569781	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.181818
19	16570916	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.153846
19	16612363	A->G	-	ENSG00000105085	MED26	protein_coding	Intergenic	.	.	Alu	0.1875
19	16612417	A->G	-	ENSG00000105085	MED26	protein_coding	Intergenic	.	.	Alu	0.307692
19	16612513	A->G	-	ENSG00000105085	MED26	protein_coding	Intergenic	.	.	Alu	0.2
19	16636534	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.461538
19	16636542	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.125
19	16636550	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.125
19	16636722	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.157895
19	16636831	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.142857
19	16636858	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.2
19	16641778	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.181818
19	16641860	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.181818
19	16642313	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.333333
19	16642355	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.153846
19	16642375	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.3
19	16642540	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.3
19	16642618	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.2
19	16642728	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.55
19	16642735	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.210526
19	16642736	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.526316
19	16642744	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.117647
19	16642948	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.416667
19	16642956	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.333333
19	16642961	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.384615
19	16642962	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.714286
19	16643017	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.416667
19	16643018	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.272727
19	16643475	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.133333
19	17080613	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17080726	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.230769
19	17080789	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17080808	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.307692
19	17080818	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.125
19	17081257	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.125
19	17083147	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.230769
19	17083823	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.266667
19	17083834	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.235294
19	17083843	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.117647
19	17083903	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.0714286
19	17084154	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.6875
19	17087809	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17088960	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17092548	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17094673	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.416667
19	17094687	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.142857
19	17096035	A->G	+	ENSG00000269066	AC020908.3	antisense	Intergenic	.	.	Alu	0.214286
19	17096054	A->G	+	ENSG00000269066	AC020908.3	antisense	Intergenic	.	.	Alu	0.166667
19	17097316	A->G	+	ENSG00000269066	AC020908.3	antisense	Intergenic	.	.	Alu	0.166667
19	17098316	A->G	+	ENSG00000269066	AC020908.3	antisense	Intergenic	.	.	Alu	0.230769
19	17104594	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.111111
19	17104623	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17104628	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.142857
19	17104689	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17106082	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17106137	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.315789
19	17106168	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.08
19	17106193	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.0952381
19	17106218	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.0909091
19	17107221	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.136364
19	17107222	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17109272	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17115058	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17115082	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.117647
19	17115106	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.125
19	17117762	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.111111
19	17117858	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17118373	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17119830	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17119878	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17122664	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.133333
19	17130010	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17130055	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.3
19	17130081	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17130082	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.272727
19	17156320	A->G	+	ENSG00000268056	AC020913.1	antisense	Intergenic	.	.	Alu	0.166667
19	17414131	A->G	+	ENSG00000282851	BISPR	lincRNA	Intergenic	.	.	Alu	0.3
19	17846064	A->G	-	ENSG00000105639	JAK3	protein_coding	Intergenic	.	.	Alu	0.230769
19	17846068	A->G	-	ENSG00000105639	JAK3	protein_coding	Intergenic	.	.	Alu	0.166667
19	18003052	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.166667
19	18003089	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.117647
19	18003189	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.263158
19	18011779	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.230769
19	18011784	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.307692
19	18268571	A->G	-	ENSG00000130518	IQCN	protein_coding	Intergenic	.	.	Alu	0.166667
19	18275297	A->G	-	.	.	.	Intergenic	.	.	Alu	0.263158
19	18275324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
19	18275329	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	18276111	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
19	18277779	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	18471122	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.181818
19	18471263	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.25
19	18471292	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.153846
19	18471568	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.3
19	18838241	A->G	+	ENSG00000005007	UPF1	protein_coding	Intergenic	.	.	Alu	0.416667
19	18838439	A->G	+	ENSG00000005007	UPF1	protein_coding	Intergenic	.	.	Alu	0.133333
19	18842067	A->G	+	ENSG00000005007	UPF1	protein_coding	Intergenic	.	.	Alu	0.142857
19	18843794	A->G	+	ENSG00000005007	UPF1	protein_coding	Intergenic	.	.	Alu	0.25
19	18843795	A->G	+	ENSG00000005007	UPF1	protein_coding	Intergenic	.	.	Alu	0.125
19	18908175	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.153846
19	18908189	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0909091
19	18908237	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.473684
19	18908375	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.105263
19	18908423	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.5
19	18908697	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.125
19	18908698	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.133333
19	18908876	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.307692
19	18908898	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.153846
19	18908922	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	18908936	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0909091
19	18908952	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.235294
19	18908954	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.4375
19	18908962	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.533333
19	18908964	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	18908996	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0769231
19	18909785	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.105263
19	18909794	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
19	18910502	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0689655
19	18912295	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0833333
19	18912312	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0952381
19	18912382	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	18912383	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.117647
19	18914481	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0952381
19	18914818	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.133333
19	18915132	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
19	18915164	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.111111
19	18916063	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.153846
19	18916102	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.272727
19	18916845	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.1875
19	18916878	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.181818
19	18917546	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.125
19	18918632	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.125
19	18918647	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.105263
19	18918701	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
19	18918702	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0714286
19	19032426	A->G	-	ENSG00000064607	SUGP2	protein_coding	Intergenic	.	.	Alu	0.133333
19	19032449	A->G	-	ENSG00000064607	SUGP2	protein_coding	Intergenic	.	.	Alu	0.117647
19	19309432	A->G	-	ENSG00000105705	SUGP1	protein_coding	Intergenic	.	.	Alu	0.6
19	19322115	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.105263
19	19322127	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.466667
19	19322132	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.153846
19	19322173	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.181818
19	19322370	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.307692
19	19322417	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.736842
19	19322434	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	19322437	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.217391
19	19322478	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.347826
19	19322488	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	19322555	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.315789
19	19322586	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.12
19	19322588	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.0769231
19	19323219	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.166667
19	19325516	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.2
19	19325519	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.2
19	19325613	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.25
19	19326275	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.133333
19	19326831	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.357143
19	19328039	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.4
19	19328057	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.25
19	19328062	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.181818
19	19329762	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.105263
19	19331682	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.142857
19	19401081	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.3
19	19401089	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.3
19	19401090	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.3
19	19411984	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.2
19	19424158	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.153846
19	19479899	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.166667
19	19482217	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.166667
19	19482218	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.166667
19	19482261	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.142857
19	19482270	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.357143
19	19617511	A->G	-	ENSG00000105717	PBX4	protein_coding	Intergenic	.	.	Alu	0.181818
19	19670305	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.833333
19	19670307	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.4
19	19670369	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.75
19	19670370	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.307692
19	19670373	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.230769
19	19670406	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.166667
19	19670422	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.153846
19	19670579	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.117647
19	19670595	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.133333
19	19670610	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.117647
19	19670636	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.785714
19	19670650	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.642857
19	19670703	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.176471
19	19673455	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.181818
19	19675737	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.0869565
19	19675784	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.0952381
19	19675794	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.166667
19	19675856	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.115385
19	19675956	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.125
19	19676075	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.333333
19	19676086	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.1875
19	19789939	A->G	-	ENSG00000267481	AC011477.2	sense_intronic	Intergenic	.	.	Alu	0.230769
19	19789944	A->G	-	ENSG00000267481	AC011477.2	sense_intronic	Intergenic	.	.	Alu	0.5
19	19789949	A->G	-	ENSG00000267481	AC011477.2	sense_intronic	Intergenic	.	.	Alu	0.142857
19	19813881	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.142857
19	19818872	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.214286
19	19818905	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.142857
19	19819864	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.111111
19	19821079	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.153846
19	19821171	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.117647
19	20641827	A->G	-	ENSG00000188171	ZNF626	protein_coding	Intergenic	.	.	Alu	0.5
19	20641828	A->G	-	ENSG00000188171	ZNF626	protein_coding	Intergenic	.	.	Alu	0.533333
19	21021235	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.133333
19	21021297	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.444444
19	21021317	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.5
19	21021453	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.105263
19	21021898	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.222222
19	21021967	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.111111
19	21021980	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.133333
19	21022012	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.105263
19	21022021	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.277778
19	21022038	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.25
19	21022098	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.133333
19	21022101	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.2
19	21022112	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.157895
19	21085553	A->G	+	ENSG00000160352	ZNF714	protein_coding	Intergenic	.	.	Alu	0.416667
19	21103762	A->G	+	ENSG00000160352	ZNF714	protein_coding	Intergenic	.	.	Alu	0.3
19	21144292	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.2
19	21144340	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.1875
19	21144356	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.181818
19	21144466	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.08
19	21147342	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.5
19	21147484	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.230769
19	21147491	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.384615
19	21148257	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.214286
19	21148269	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.133333
19	21168467	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.2
19	21319514	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.3
19	21319632	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.133333
19	21320060	A->G	-	ENSG00000182141	ZNF708	protein_coding	Intergenic	.	.	Alu	0.181818
19	21376609	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.555556
19	21376610	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.611111
19	21377173	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.346154
19	21377176	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.230769
19	21377186	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.142857
19	21377196	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.1
19	21377200	A->G	+	ENSG00000172687	ZNF738	protein_coding	Intergenic	.	.	Alu	0.5625
19	21824008	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.4
19	21824012	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.181818
19	21824014	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.454545
19	21834165	A->G	-	ENSG00000198521	ZNF43	protein_coding	Intergenic	.	.	Alu	0.2
19	23258541	A->G	-	ENSG00000283201	AC092329.3	protein_coding	Intergenic	.	.	Alu	0.166667
19	23264771	A->G	-	ENSG00000283201	AC092329.3	protein_coding	Intergenic	.	.	Alu	0.142857
19	23367082	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.105263
19	23367193	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.125
19	23367995	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.8
19	23368021	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.538462
19	23370586	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.125
19	23370591	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.111111
19	23370599	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.15
19	23370624	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.208333
19	23370731	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.1875
19	23370732	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.368421
19	23371238	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.133333
19	23371246	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.1
19	23371283	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.157895
19	23371289	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.166667
19	23683023	A->G	-	ENSG00000197372	ZNF675	protein_coding	Intergenic	.	.	Alu	0.166667
19	23683089	A->G	-	ENSG00000197372	ZNF675	protein_coding	Intergenic	.	.	Alu	0.0833333
19	23685172	A->G	-	ENSG00000197372	ZNF675	protein_coding	Intergenic	.	.	Alu	0.2
19	24055153	A->G	+	ENSG00000268362	AC092279.1	lincRNA	Intergenic	.	.	Alu	0.2
19	24090536	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.363636
19	24092054	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.181818
19	24109799	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.277778
19	24109833	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.130435
19	24109851	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.117647
19	24109861	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.2
19	24109867	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.461538
19	24110299	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.142857
19	24110352	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.176471
19	24110353	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.117647
19	24118219	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.133333
19	24118263	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.117647
19	24118289	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.111111
19	24118926	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.153846
19	24118991	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.181818
19	24119031	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.545455
19	24119545	A->G	+	ENSG00000213096	ZNF254	protein_coding	Intergenic	.	.	Alu	0.142857
19	29943221	A->G	+	ENSG00000105176	URI1	protein_coding	Intergenic	.	.	Alu	0.105263
19	29943222	A->G	+	ENSG00000105176	URI1	protein_coding	Intergenic	.	.	Alu	0.15
19	32700547	A->G	+	ENSG00000213965	NUDT19	protein_coding	Intergenic	.	.	Alu	0.272727
19	34187028	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.272727
19	34187031	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.230769
19	34187559	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.153846
19	34193946	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34198496	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34198548	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.111111
19	34198557	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.263158
19	34198566	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.142857
19	34198866	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34199237	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.105263
19	34199254	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.277778
19	34199266	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.130435
19	34199320	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34199333	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.3
19	34199351	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0909091
19	34201412	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.125
19	34201921	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0833333
19	34201922	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0769231
19	34202312	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.172414
19	34202435	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.0833333
19	34210624	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.214286
19	34210675	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.105263
19	34211704	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.142857
19	34212300	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.166667
19	34213030	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.133333
19	34216529	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.181818
19	34216680	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.125
19	34225904	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34433727	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.181818
19	34434211	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.4
19	34434368	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.3125
19	34448488	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.2
19	34448521	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.181818
19	34471489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
19	34472146	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	35160001	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.166667
19	35160025	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.214286
19	35160048	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.142857
19	35160070	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.166667
19	35160406	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.105263
19	35160546	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.285714
19	35160580	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.125
19	35274611	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.294118
19	35274643	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.08
19	35274716	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.315789
19	35274726	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.4
19	35885738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	35891652	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0869565
19	35891759	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.166667
19	35891804	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.230769
19	35891805	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.230769
19	35891999	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.25
19	35892105	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0909091
19	35892176	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.130435
19	35892255	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0869565
19	35892275	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0689655
19	35892319	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.105263
19	35892324	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.294118
19	35893061	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.166667
19	35893087	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.166667
19	36560015	A->G	-	ENSG00000186020	ZNF529	protein_coding	Intergenic	.	.	Alu	0.181818
19	37238137	A->G	+	ENSG00000188283	ZNF383	protein_coding	Intergenic	.	.	Alu	0.181818
19	37328260	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.133333
19	38626617	A->G	+	ENSG00000178982	EIF3K	protein_coding	Intergenic	.	.	Alu	0.181818
19	38626868	A->G	+	ENSG00000178982	EIF3K	protein_coding	Intergenic	.	.	Alu	0.2
19	38627615	A->G	+	ENSG00000178982	EIF3K	protein_coding	Intergenic	.	.	Alu	0.25
19	38627631	A->G	+	ENSG00000178982	EIF3K	protein_coding	Intergenic	.	.	Alu	0.363636
19	38673020	A->G	+	ENSG00000130402	ACTN4	protein_coding	Intergenic	.	.	Alu	0.2
19	38704266	A->G	+	ENSG00000130402	ACTN4	protein_coding	Intergenic	.	.	Alu	0.2
19	38896069	A->G	-	ENSG00000068903	SIRT2	protein_coding	Intergenic	.	.	Alu	0.2
19	39332886	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.2
19	39332891	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.3
19	39333443	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.363636
19	39333497	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.25
19	39333533	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.153846
19	39333534	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.153846
19	39334540	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.0952381
19	39334879	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.0810811
19	39334904	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.0833333
19	39334915	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.0625
19	39334978	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.117647
19	39334987	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.133333
19	39335021	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.285714
19	39978871	A->G	+	ENSG00000013275	PSMC4	protein_coding	Intergenic	.	.	Alu	0.153846
19	41266158	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.111111
19	41332747	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.166667
19	41335771	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.153846
19	41339254	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.4
19	44166381	A->G	+	ENSG00000167380	ZNF226	protein_coding	Intergenic	.	.	Alu	0.214286
19	44166398	A->G	+	ENSG00000167380	ZNF226	protein_coding	Intergenic	.	.	Alu	0.153846
19	44750393	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.0952381
19	44750398	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.0769231
19	44750416	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.0645161
19	44751625	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.0408163
19	44755648	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.107143
19	44755839	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45004604	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45004612	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.333333
19	45004613	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.583333
19	45004672	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.285714
19	45004682	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45004720	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45004747	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45004920	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45004992	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.222222
19	45005040	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45005872	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.08
19	45006424	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.08
19	45006810	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45010038	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.148148
19	45010044	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0740741
19	45010045	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45010778	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45010956	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.107143
19	45012952	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0444444
19	45012970	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0425532
19	45013221	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.15
19	45013222	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.190476
19	45013259	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45013324	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45013329	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.421053
19	45013721	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45013782	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0810811
19	45014380	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0967742
19	45014433	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0925926
19	45014582	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0869565
19	45014618	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45014728	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45014771	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.08
19	45014781	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.08
19	45015137	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0571429
19	45016084	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0540541
19	45016089	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0769231
19	45016798	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0606061
19	45017410	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.08
19	45017745	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45017746	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.210526
19	45017779	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45017785	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.25
19	45018150	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45018155	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45018281	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.176471
19	45018283	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45018310	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45018523	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45018733	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45018816	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45019082	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.137931
19	45019086	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45019114	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.108108
19	45019116	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0555556
19	45019166	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0350877
19	45019202	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0961538
19	45019220	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0434783
19	45019325	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0512821
19	45019697	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45019700	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45019795	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.25
19	45019860	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.08
19	45019886	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0666667
19	45020317	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.128205
19	45020336	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.137931
19	45020398	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0869565
19	45020476	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45020479	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45020933	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.5625
19	45020946	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0666667
19	45020950	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0714286
19	45021010	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45021032	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.222222
19	45021041	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.176471
19	45021064	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.15
19	45021068	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45021081	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.285714
19	45021151	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.263158
19	45021674	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.230769
19	45021679	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45021755	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.25
19	45021775	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45031297	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45031315	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45031377	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45031399	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45033926	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45033930	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.153846
19	45033940	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1875
19	45033953	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45036705	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45037160	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45037177	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45042693	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.3
19	45042706	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.272727
19	45518512	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.4
19	45518517	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.181818
19	45518685	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.2
19	45518686	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.181818
19	45856791	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.2
19	45857871	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.166667
19	45857896	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.153846
19	45857947	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.3
19	45858991	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.142857
19	45858992	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.35
19	45859023	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.25
19	45859024	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.3
19	45859353	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.1875
19	45859354	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.125
19	45859380	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.176471
19	45859500	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.105263
19	45859524	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.153846
19	45859553	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.181818
19	45859807	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.12
19	45859839	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.0714286
19	45860253	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.133333
19	45860342	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.47619
19	45860358	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45860375	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.318182
19	45860574	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.5
19	45860679	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.272727
19	45860716	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.142857
19	45860755	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.384615
19	46743803	A->G	-	ENSG00000090372	STRN4	protein_coding	Intergenic	.	.	Alu	0.2
19	46744584	A->G	-	ENSG00000090372	STRN4	protein_coding	Intergenic	.	.	Alu	0.125
19	46744625	A->G	-	ENSG00000090372	STRN4	protein_coding	Intergenic	.	.	Alu	0.0952381
19	47266202	A->G	+	ENSG00000105321	CCDC9	protein_coding	Intergenic	.	.	Alu	0.2
19	47508881	A->G	-	ENSG00000105402	NAPA	protein_coding	Intergenic	.	.	Alu	0.363636
19	48328068	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.166667
19	48328860	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.137931
19	48328866	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0625
19	48328912	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.09375
19	48328970	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.09375
19	49086749	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.2
19	49089197	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.125
19	49089257	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.181818
19	49089278	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.333333
19	49089422	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.2
19	49091142	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.2
19	49093114	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.125
19	49093971	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.181818
19	49093977	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.230769
19	49094365	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.142857
19	49094414	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.307692
19	49096187	A->G	+	ENSG00000104852	SNRNP70	protein_coding	Intergenic	.	.	Alu	0.3
19	49488800	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.1875
19	49489297	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.125
19	49489305	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.259259
19	49627203	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	49804802	A->G	+	ENSG00000196961	AP2A1	protein_coding	Intergenic	.	.	Alu	0.25
19	49804843	A->G	+	ENSG00000196961	AP2A1	protein_coding	Intergenic	.	.	Alu	0.2
19	49927134	A->G	-	ENSG00000104951	IL4I1	protein_coding	Intergenic	.	.	Alu	0.3
19	50803461	A->G	-	ENSG00000167747	C19orf48	protein_coding	Intergenic	.	.	Alu	0.3
19	51969707	A->G	-	ENSG00000269235	ZNF350-AS1	antisense	Intergenic	.	.	Alu	0.181818
19	52193595	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.0740741
19	52197417	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.230769
19	52197419	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.142857
19	52197572	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.125
19	52199443	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.105263
19	52199445	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.117647
19	52225256	A->G	+	ENSG00000268015	AC010320.2	antisense	Intergenic	.	.	Alu	0.181818
19	52271059	A->G	+	ENSG00000196214	ZNF766	protein_coding	Intergenic	.	.	Alu	0.2
19	52407314	A->G	+	ENSG00000167555	ZNF528	protein_coding	Intergenic	.	.	Alu	0.3
19	52558489	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52618156	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.153846
19	52855864	A->G	-	ENSG00000204604	ZNF468	protein_coding	Intergenic	.	.	Alu	0.7
19	52925289	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.157895
19	52926483	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.142857
19	52926829	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	52926830	A->G	-	ENSG00000283088	AC010487.3	protein_coding	Intergenic	.	.	Alu	0.181818
19	52934720	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
19	52935931	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.272727
19	52935936	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
19	52939402	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.142857
19	52939526	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
19	52940505	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.214286
19	52940524	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.5
19	53088413	A->G	-	ENSG00000170949	ZNF160	protein_coding	Intergenic	.	.	Alu	0.181818
19	53541890	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.2
19	53541906	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.307692
19	53564333	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.230769
19	53567800	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.142857
19	54098726	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.166667
19	54202249	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0273973
19	54203602	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.125
19	54205848	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.075
19	54444422	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
19	54444431	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	54451802	A->G	+	ENSG00000167615	LENG8	protein_coding	Intergenic	.	.	Alu	1
19	57300469	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
19	57300527	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
19	57300535	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
19	57300966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
19	57301107	A->G	+	.	.	.	Intergenic	.	.	Alu	1
19	57301198	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
19	57770888	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.2
19	57770951	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.166667
19	57771357	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.2
19	57771883	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.181818
19	57772084	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.153846
19	57774030	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.181818
19	57775202	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.181818
19	57775458	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.2
19	57775477	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.166667
19	57777190	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.0909091
19	57787274	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.181818
19	57843065	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.0666667
19	57843070	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.0606061
19	57843802	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.25
19	57843812	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.307692
19	57843862	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.153846
19	57844224	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.307692
19	57844252	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.6
19	57844254	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.363636
19	57854807	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.266667
19	57855822	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	57906544	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.6
19	57906558	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.285714
19	57906598	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.2
19	57915313	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.5
19	58095051	A->G	-	ENSG00000121413	ZSCAN18	protein_coding	Intergenic	.	.	Alu	0.6
19	58187491	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.117647
19	58187521	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.142857
19	58187522	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.214286
19	58187678	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.125
19	58187698	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.133333
19	58187805	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.181818
19	58187806	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.363636
19	58188537	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.3125
19	58188559	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.142857
19	58194103	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.142857
19	58194104	A->G	+	ENSG00000171606	ZNF274	protein_coding	Intergenic	.	.	Alu	0.142857
19	58349218	A->G	+	ENSG00000121410	A1BG	protein_coding	Intergenic	.	.	Alu	0.25
20	17676793	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.1875
20	17676837	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.125
20	17676862	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.28
20	17676872	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.172414
20	17676904	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	17676908	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.214286
20	17676912	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0689655
20	17676941	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	17677015	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
20	17677589	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.214286
20	17677623	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	17677727	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.4
20	17677731	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.2
20	17677756	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.117647
20	17677832	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.173913
20	17677833	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.478261
20	17677834	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.285714
20	21363963	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.857143
20	21364647	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.166667
20	21364651	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.363636
20	25314186	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.2
20	25387404	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.166667
20	25387439	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.2
20	25695224	A->G	-	ENSG00000130684	ZNF337	protein_coding	Intergenic	.	.	Alu	0.2
20	25695750	A->G	-	ENSG00000130684	ZNF337	protein_coding	Intergenic	.	.	Alu	0.2
20	25695755	A->G	-	ENSG00000130684	ZNF337	protein_coding	Intergenic	.	.	Alu	0.166667
20	31564955	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.153846
20	32370917	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.2
20	32371419	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.2
20	32371664	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.214286
20	32371670	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.125
20	32374074	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.214286
20	32374087	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.375
20	32374165	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.181818
20	32374510	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.153846
20	32380570	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.166667
20	32380709	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.181818
20	32382085	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.363636
20	32382097	A->G	+	ENSG00000171456	ASXL1	protein_coding	Intergenic	.	.	Alu	0.181818
20	32832568	A->G	+	ENSG00000101367	MAPRE1	protein_coding	Intergenic	.	.	Alu	0.166667
20	33821660	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.2
20	33821662	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.3
20	33821702	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.2
20	34073913	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.333333
20	34086091	A->G	+	ENSG00000125970	RALY	protein_coding	Intergenic	.	.	Alu	0.25
20	34200636	A->G	+	ENSG00000101440	ASIP	protein_coding	Intergenic	.	.	Alu	1
20	34369282	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.285714
20	34373904	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.266667
20	34373948	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.166667
20	34380997	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.454545
20	34428607	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.142857
20	34434021	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.2
20	34463216	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.142857
20	34467274	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.181818
20	34467320	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.272727
20	34467328	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.363636
20	34467483	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.1
20	34467815	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.3
20	34467852	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.142857
20	34468152	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.166667
20	34468164	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.181818
20	34468604	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.181818
20	34468605	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.272727
20	34468773	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.153846
20	34469389	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.142857
20	34469428	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.25
20	34469430	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.133333
20	34470820	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.105263
20	34470821	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.157895
20	34470837	A->G	+	ENSG00000078747	ITCH	protein_coding	Intergenic	.	.	Alu	0.133333
20	35089281	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.181818
20	35713437	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0851064
20	35713611	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0588235
20	35717045	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0689655
20	35719264	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.172414
20	35719485	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.3
20	35719539	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.125
20	35719601	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.3
20	35720590	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.2
20	35720647	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.15
20	35720725	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.24
20	35720766	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35723869	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.133333
20	35723984	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.08
20	35726406	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0869565
20	35726426	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.103448
20	35726962	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0540541
20	35727215	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.107143
20	35727303	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0454545
20	35727549	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0425532
20	35727586	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0540541
20	35727587	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0540541
20	35727614	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0740741
20	35728915	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.1
20	35728981	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.08
20	35736685	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0740741
20	35736713	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.222222
20	35736736	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.333333
20	35736762	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.2
20	35736791	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.333333
20	35736817	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.909091
20	35736846	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35737014	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35737015	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.131579
20	35737085	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.352941
20	35737108	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.142857
20	35737109	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0952381
20	35737135	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.166667
20	35737148	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.176471
20	35737241	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0625
20	35737460	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0833333
20	35737478	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.12
20	35737555	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.111111
20	35737618	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0714286
20	35737620	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0666667
20	35737676	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0555556
20	35853488	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.4
20	36576804	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.454545
20	36576805	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.272727
20	36576834	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.363636
20	36577130	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.117647
20	36578354	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.25
20	36629838	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.3
20	36913927	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	36914917	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	37212327	A->G	+	ENSG00000118705	RPN2	protein_coding	Intergenic	.	.	Alu	0.272727
20	37212333	A->G	+	ENSG00000118705	RPN2	protein_coding	Intergenic	.	.	Alu	0.2
20	38077098	A->G	+	ENSG00000101413	RPRD1B	protein_coding	Intergenic	.	.	Alu	0.1
20	38077929	A->G	+	ENSG00000101413	RPRD1B	protein_coding	Intergenic	.	.	Alu	0.181818
20	38501387	A->G	+	ENSG00000170471	RALGAPB	protein_coding	Intergenic	.	.	Alu	0.153846
20	38501433	A->G	+	ENSG00000170471	RALGAPB	protein_coding	Intergenic	.	.	Alu	0.181818
20	38501601	A->G	+	ENSG00000170471	RALGAPB	protein_coding	Intergenic	.	.	Alu	0.1875
20	38501604	A->G	+	ENSG00000170471	RALGAPB	protein_coding	Intergenic	.	.	Alu	0.25
20	38808158	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.241071
20	38808167	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0642202
20	38808672	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.26087
20	38808706	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.171429
20	38808707	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0571429
20	38808715	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0824742
20	38809877	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0246914
20	38818785	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.25
20	38818878	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0625
20	38818896	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0571429
20	38818940	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0769231
20	38819412	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0377358
20	38819454	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0697674
20	38824317	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0714286
20	38824405	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.12766
20	38825414	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0769231
20	38836371	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0555556
20	38836758	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0465116
20	38846770	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.105263
20	38846779	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.105263
20	38846813	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.347826
20	38846818	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0769231
20	38846822	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.153846
20	38846890	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.12
20	38847400	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.1
20	38847457	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0714286
20	38847491	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.111111
20	38847502	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.105263
20	38847540	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.181818
20	38847609	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.2
20	38847618	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.133333
20	38851839	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0571429
20	38864063	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.434783
20	38864069	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.125
20	38865552	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.357143
20	38865556	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.285714
20	38865848	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.130435
20	38865937	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.4
20	38865938	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.5
20	38866887	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.130435
20	38866955	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.125
20	38866972	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.173913
20	38867043	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.5
20	38912413	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.1
20	38912629	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.117647
20	38912632	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.117647
20	38912889	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.363636
20	38912963	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.5
20	38914768	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.2
20	38914769	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.2
20	38914942	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.2
20	41042122	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41042172	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.0606061
20	41056493	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.15
20	41056504	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.210526
20	41056620	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.285714
20	41056622	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.133333
20	41093932	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.142857
20	41095153	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.166667
20	41512211	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.153846
20	41602871	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.2
20	41603609	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.153846
20	41603621	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.153846
20	41610505	A->G	-	ENSG00000124177	CHD6	protein_coding	Intergenic	.	.	Alu	0.166667
20	44502459	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.125
20	44502514	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.230769
20	44502515	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.384615
20	44502523	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.714286
20	44502770	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.153846
20	44502847	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.1
20	44502856	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.117647
20	44505460	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.3
20	44510579	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.1
20	44510588	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.2
20	44510700	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.285714
20	44510728	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.266667
20	44510981	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.0952381
20	44510982	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.142857
20	44510999	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.117647
20	44511021	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.105263
20	44511038	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.380952
20	44511078	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.133333
20	44511084	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.117647
20	44511096	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.384615
20	44511108	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.214286
20	44511126	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.307692
20	44516154	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.230769
20	44516180	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.153846
20	44516202	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.333333
20	44516216	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.181818
20	44516264	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.272727
20	44516288	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.6
20	44516298	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.2
20	45014376	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.3
20	45034770	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.2
20	45065992	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.363636
20	45071998	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.2
20	45895352	A->G	+	ENSG00000064601	CTSA	protein_coding	Intergenic	.	.	Alu	0.166667
20	45895478	A->G	+	ENSG00000064601	CTSA	protein_coding	Intergenic	.	.	Alu	0.181818
20	45954833	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.636364
20	45954840	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.166667
20	45954860	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.181818
20	46397614	A->G	-	ENSG00000062598	ELMO2	protein_coding	Intergenic	.	.	Alu	0.142857
20	46398389	A->G	-	ENSG00000062598	ELMO2	protein_coding	Intergenic	.	.	Alu	0.166667
20	47505322	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
20	47507712	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.3
20	47507719	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.272727
20	47512114	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
20	47513549	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.111111
20	47513574	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.2
20	47515748	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.181818
20	47517056	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.181818
20	47518288	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.461538
20	47530563	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.181818
20	47535161	A->G	+	ENSG00000124151	NCOA3	protein_coding	Intergenic	.	.	Alu	0.272727
20	48643454	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.25
20	48643462	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.363636
20	48643696	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.25
20	48643736	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.272727
20	48643776	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.2
20	48925758	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.461538
20	48926477	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.2
20	48926480	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.2
20	48926528	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.153846
20	48926539	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.1875
20	48926558	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.1875
20	48926563	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.117647
20	48926576	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.105263
20	48926585	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.25
20	48926592	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	48926600	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.125
20	48926611	A->G	+	ENSG00000124198	ARFGEF2	protein_coding	Intergenic	.	.	Alu	0.153846
20	49064893	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.2
20	49064945	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.125
20	49065010	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.4
20	49070698	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.181818
20	49071617	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.2
20	49071690	A->G	+	ENSG00000124207	CSE1L	protein_coding	Intergenic	.	.	Alu	0.181818
20	49127620	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.181818
20	49127654	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.2
20	49132637	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.181818
20	49141979	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.272727
20	49142006	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.133333
20	49143427	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.2
20	49143481	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.615385
20	49143498	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.25
20	49143510	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.2
20	49157831	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.3
20	49159663	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.363636
20	49159699	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.2
20	49164014	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.181818
20	49173413	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.2
20	49232149	A->G	+	ENSG00000124228	DDX27	protein_coding	Intergenic	.	.	Alu	0.153846
20	49251383	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.272727
20	49262367	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.2
20	49263767	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.117647
20	49707687	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.176471
20	49707690	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.25
20	49707722	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.25
20	49709521	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.181818
20	49709717	A->G	-	ENSG00000158470	B4GALT5	protein_coding	Intergenic	.	.	Alu	0.133333
20	49856672	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.181818
20	49856675	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.272727
20	49856742	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.4
20	49856743	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.3
20	49942009	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.125
20	49942159	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.08
20	49942208	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.0967742
20	49942749	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.210526
20	49942756	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.1
20	49943763	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.272727
20	49943776	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.272727
20	50088529	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.0714286
20	50091143	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.272727
20	50091144	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.25
20	50091229	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.133333
20	50091235	A->G	-	ENSG00000244687	UBE2V1	protein_coding	Intergenic	.	.	Alu	0.133333
20	50544225	A->G	+	ENSG00000196396	PTPN1	protein_coding	Intergenic	.	.	Alu	0.2
20	50545165	A->G	+	ENSG00000196396	PTPN1	protein_coding	Intergenic	.	.	Alu	0.454545
20	50896711	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.25
20	50899724	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.272727
20	50907655	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.105263
20	50907870	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0666667
20	50907877	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.1
20	50910355	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0833333
20	50910492	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.129032
20	50910537	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0645161
20	50910540	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0740741
20	50910543	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.357143
20	50910565	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0833333
20	50910945	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.2
20	50912219	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0869565
20	50912223	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0909091
20	50912230	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.142857
20	50912232	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.65
20	50912284	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.214286
20	50912285	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.2
20	50912311	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.210526
20	50912343	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.142857
20	50912429	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.181818
20	50912993	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0625
20	50913059	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.32
20	50919403	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.08
20	50919411	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.28
20	50919419	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.357143
20	50920092	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.0833333
20	50920120	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.166667
20	50920153	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.111111
20	50920195	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.181818
20	50925822	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.1
20	50925884	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.227273
20	50925938	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.125
20	50927633	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.125
20	50927691	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.333333
20	50942607	A->G	-	ENSG00000259456	ADNP-AS1	antisense	Intergenic	.	.	Alu	0.166667
20	50950704	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.214286
20	50950707	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.142857
20	50950775	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.166667
20	50950787	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.454545
20	50950801	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.181818
20	50950817	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.3
20	50950847	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.272727
20	50955643	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.272727
20	51527880	A->G	-	ENSG00000101096	NFATC2	protein_coding	Intergenic	.	.	Alu	0.3
20	51527933	A->G	-	ENSG00000101096	NFATC2	protein_coding	Intergenic	.	.	Alu	0.2
20	51527976	A->G	-	ENSG00000101096	NFATC2	protein_coding	Intergenic	.	.	Alu	0.3
20	53573556	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.285714
20	56477617	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	56477635	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	56477693	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.142857
20	56478272	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.363636
20	56498299	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.230769
20	56503753	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.181818
20	56506961	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.214286
20	56506962	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.133333
20	56506965	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.214286
20	58314286	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.272727
20	58314299	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.307692
20	58314303	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.454545
20	58314663	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.214286
20	58314664	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.142857
20	58314665	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.285714
20	58314679	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.153846
20	58327052	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.181818
20	58327058	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.5
20	62125798	A->G	+	ENSG00000149657	LSM14B	protein_coding	Intergenic	.	.	Alu	0.2
20	62140612	A->G	-	ENSG00000101182	PSMA7	protein_coding	Intergenic	.	.	Alu	0.4375
20	62275114	A->G	+	ENSG00000130703	OSBPL2	protein_coding	Intergenic	.	.	Alu	0.2
20	62275587	A->G	+	ENSG00000130703	OSBPL2	protein_coding	Intergenic	.	.	Alu	0.2
20	62275683	A->G	+	ENSG00000130703	OSBPL2	protein_coding	Intergenic	.	.	Alu	0.166667
20	62915643	A->G	-	ENSG00000101191	DIDO1	protein_coding	Intergenic	.	.	Alu	0.176471
20	62915645	A->G	-	ENSG00000101191	DIDO1	protein_coding	Intergenic	.	.	Alu	0.157895
20	62915804	A->G	-	ENSG00000101191	DIDO1	protein_coding	Intergenic	.	.	Alu	0.121212
20	62931089	A->G	-	ENSG00000101191	DIDO1	protein_coding	Intergenic	.	.	Alu	0.105263
20	62932147	A->G	-	ENSG00000101191	DIDO1	protein_coding	Intergenic	.	.	Alu	0.2
20	63596755	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.2
20	63596869	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.166667
20	63596870	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.166667
20	63597390	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.3
20	63597423	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.2
20	63597443	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.153846
20	64013094	A->G	+	ENSG00000101161	PRPF6	protein_coding	Intergenic	.	.	Alu	0.363636
21	14993723	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.117647
21	15017331	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.272727
21	15017339	A->G	-	ENSG00000180530	NRIP1	protein_coding	Intergenic	.	.	Alu	0.2
21	17600603	A->G	-	ENSG00000154640	BTG3	protein_coding	Intergenic	.	.	Alu	0.05
21	17601490	A->G	-	ENSG00000154640	BTG3	protein_coding	Intergenic	.	.	Alu	0.129032
21	17601522	A->G	-	ENSG00000154640	BTG3	protein_coding	Intergenic	.	.	Alu	0.0833333
21	17601524	A->G	-	ENSG00000154640	BTG3	protein_coding	Intergenic	.	.	Alu	0.08
21	29028696	A->G	+	ENSG00000156256	USP16	protein_coding	Intergenic	.	.	Alu	0.125
21	29035798	A->G	+	ENSG00000156256	USP16	protein_coding	Intergenic	.	.	Alu	0.692308
21	29054886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
21	29055541	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
21	29055568	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
21	31726413	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.181818
21	31726540	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.363636
21	31727114	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.1
21	31727146	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.105263
21	31727150	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.111111
21	31727216	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.117647
21	31727262	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.142857
21	31727273	A->G	-	ENSG00000156304	SCAF4	protein_coding	Intergenic	.	.	Alu	0.153846
21	33231945	A->G	+	ENSG00000159110	IFNAR2	protein_coding	Intergenic	.	.	Alu	0.4
21	33337120	A->G	+	ENSG00000142166	IFNAR1	protein_coding	Intergenic	.	.	Alu	0.454545
21	33337148	A->G	+	ENSG00000142166	IFNAR1	protein_coding	Intergenic	.	.	Alu	0.142857
21	33337180	A->G	+	ENSG00000142166	IFNAR1	protein_coding	Intergenic	.	.	Alu	0.307692
21	33406760	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.25
21	33406884	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.1875
21	33423811	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.272727
21	33424046	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.153846
21	33430126	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.136364
21	33430469	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33430474	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.357143
21	33430555	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.125
21	33430572	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.142857
21	33430673	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.2
21	33430700	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.277778
21	33430705	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.222222
21	33431423	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.181818
21	33431456	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.3
21	33527431	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.153846
21	33527471	A->G	-	ENSG00000159131	GART	protein_coding	Intergenic	.	.	Alu	0.2
21	33905008	A->G	-	ENSG00000241837	ATP5PO	protein_coding	Intergenic	.	.	Alu	0.142857
21	33905014	A->G	-	ENSG00000241837	ATP5PO	protein_coding	Intergenic	.	.	Alu	0.214286
21	33905669	A->G	-	ENSG00000241837	ATP5PO	protein_coding	Intergenic	.	.	Alu	0.176471
21	34794777	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.4
21	34798000	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.454545
21	34872103	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.173913
21	34872116	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0869565
21	34872135	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.1
21	34872796	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.16
21	35022650	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.25
21	35022660	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.454545
21	35022715	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.363636
21	35023007	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.176471
21	35023010	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.529412
21	35023011	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.176471
21	35023017	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.2
21	35023081	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.545455
21	35023138	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.15
21	35023139	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.15
21	35023140	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.4
21	35023145	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.1
21	35023194	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.0909091
21	35023195	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.227273
21	35023216	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.153846
21	35023217	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.333333
21	36329992	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.181818
21	36340837	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.181818
21	36340839	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.181818
21	36346204	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.2
21	36346240	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.2
21	36370756	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.2
21	37374606	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.117647
21	37375587	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.214286
21	37375589	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.714286
21	37375606	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.105263
21	37375630	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.0769231
21	37375643	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.65
21	37375691	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.176471
21	37375710	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.428571
21	37375783	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.125
21	37376255	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.28
21	37376344	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.25
21	37376366	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.153846
21	37376430	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.157895
21	37376438	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.105263
21	37378368	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.111111
21	37378412	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.111111
21	37402856	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.117647
21	37402863	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.111111
21	37406433	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.125
21	37406467	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.105263
21	37409803	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.52381
21	39245144	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.153846
21	39299861	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.230769
21	39299941	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.2
21	39305938	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.111111
21	39308360	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.133333
21	39308370	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.214286
21	39308400	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.363636
21	39309159	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.166667
21	39309444	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.2
21	39310361	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.105263
21	39310748	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.1
21	39311414	A->G	-	ENSG00000185658	BRWD1	protein_coding	Intergenic	.	.	Alu	0.333333
21	41448542	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.7
21	43682042	A->G	+	ENSG00000160208	RRP1B	protein_coding	Intergenic	.	.	Alu	0.3
21	43686065	A->G	+	ENSG00000160208	RRP1B	protein_coding	Intergenic	.	.	Alu	0.111111
21	44019214	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.272727
21	44019230	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.181818
21	44040868	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.142857
21	44081433	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.142857
21	44081820	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.181818
21	44093396	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.181818
21	44852255	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.4
21	44852275	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.363636
21	44852279	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.416667
21	44852310	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.2
21	44853396	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.454545
21	44857211	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.272727
21	44857365	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.125
21	44857419	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.153846
21	44857446	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.153846
21	44857448	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.153846
21	44862407	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.166667
21	44864508	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.272727
21	44864557	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.384615
21	44864576	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.125
21	44869498	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.0697674
21	44869518	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.0571429
21	44869566	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.30303
21	44869571	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.117647
21	44869572	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.171429
21	44869578	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.375
21	44869590	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.133333
21	44870284	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.136364
21	44870296	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.0465116
21	44870297	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.0930233
21	44870311	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.0810811
21	44870324	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.0434783
21	44870329	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.0714286
21	45650051	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.117647
21	45650128	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.214286
21	45650143	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.166667
21	45650530	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.454545
21	45650599	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.642857
21	45650638	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.2
21	46193656	A->G	-	ENSG00000160285	LSS	protein_coding	Intergenic	.	.	Alu	0.384615
21	46268777	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.2
21	46268799	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.181818
21	46268912	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.166667
21	46268922	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.647059
21	46268955	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.263158
21	46268956	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.105263
21	46268975	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.888889
21	46269344	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.545455
21	46269399	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.111111
21	46273113	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intergenic	.	.	Alu	0.0769231
21	46637834	A->G	+	ENSG00000160310	PRMT2	protein_coding	Intergenic	.	.	Alu	0.181818
21	46637847	A->G	+	ENSG00000160310	PRMT2	protein_coding	Intergenic	.	.	Alu	0.272727
22	16604409	A->G	+	ENSG00000283633	AP000547.3	lincRNA	Intergenic	.	.	Alu	0.625
22	16607309	A->G	+	ENSG00000283633	AP000547.3	lincRNA	Intergenic	.	.	Alu	0.2
22	17089694	A->G	+	ENSG00000177663	IL17RA	protein_coding	Intergenic	.	.	Alu	0.454545
22	17089726	A->G	+	ENSG00000177663	IL17RA	protein_coding	Intergenic	.	.	Alu	0.181818
22	17089744	A->G	+	ENSG00000177663	IL17RA	protein_coding	Intergenic	.	.	Alu	0.2
22	17090292	A->G	+	ENSG00000177663	IL17RA	protein_coding	Intergenic	.	.	Alu	0.230769
22	17619718	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.2
22	17619721	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.181818
22	17621562	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.2
22	17621574	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.153846
22	17623429	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.181818
22	17623555	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.166667
22	17626245	A->G	-	ENSG00000131100	ATP6V1E1	protein_coding	Intergenic	.	.	Alu	0.3
22	17986086	A->G	-	ENSG00000243156	MICAL3	protein_coding	Intergenic	.	.	Alu	0.3
22	17986126	A->G	-	ENSG00000243156	MICAL3	protein_coding	Intergenic	.	.	Alu	0.3
22	19112504	A->G	-	ENSG00000070413	DGCR2	protein_coding	Intergenic	.	.	Alu	0.4
22	19460898	A->G	-	ENSG00000070010	UFD1	protein_coding	Intergenic	.	.	Alu	0.2
22	19462102	A->G	-	ENSG00000070010	UFD1	protein_coding	Intergenic	.	.	Alu	0.636364
22	20494215	A->G	-	ENSG00000099910	KLHL22	protein_coding	Intergenic	.	.	Alu	0.545455
22	20494216	A->G	-	ENSG00000099910	KLHL22	protein_coding	Intergenic	.	.	Alu	0.181818
22	20494247	A->G	-	ENSG00000099910	KLHL22	protein_coding	Intergenic	.	.	Alu	0.2
22	20494255	A->G	-	ENSG00000099910	KLHL22	protein_coding	Intergenic	.	.	Alu	0.636364
22	20525211	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.181818
22	20525219	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.166667
22	20542172	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.157895
22	20561833	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.235294
22	20562036	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.272727
22	20572645	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.153846
22	20572719	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.142857
22	20572733	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.111111
22	20572737	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.611111
22	20572770	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.0714286
22	20572778	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20572804	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.222222
22	20572850	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.111111
22	20573086	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.411765
22	20573094	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.3125
22	20573108	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.125
22	20573151	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.111111
22	20573168	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.125
22	20573177	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20573230	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.157895
22	20573238	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.0909091
22	20573242	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.5
22	20573244	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.0740741
22	20575598	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.105263
22	20754121	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.153846
22	20814565	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.272727
22	20851167	A->G	-	ENSG00000241973	PI4KA	protein_coding	Intergenic	.	.	Alu	0.166667
22	21575910	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.142857
22	21617535	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.375
22	21617544	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.0909091
22	21618419	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.8
22	21618727	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.5
22	21618812	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.25
22	21619740	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.3
22	21619809	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.416667
22	21620112	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.125
22	21620188	A->G	+	ENSG00000185651	UBE2L3	protein_coding	Intergenic	.	.	Alu	0.166667
22	21691044	A->G	+	ENSG00000100023	PPIL2	protein_coding	Intergenic	.	.	Alu	0.181818
22	21795612	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	21832824	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.176471
22	21832825	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.222222
22	21833175	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.230769
22	21834032	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	21834033	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	21840365	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.214286
22	21840400	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.125
22	21841875	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.181818
22	21849121	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	21849167	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.4
22	21851546	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	21853843	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.272727
22	21853868	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.4
22	21864239	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.153846
22	21864246	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.272727
22	21864423	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.166667
22	23185403	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.125
22	23194540	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.166667
22	23194790	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.2
22	23194821	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.333333
22	23194826	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.142857
22	23195165	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.166667
22	23198970	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.0833333
22	23200340	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.230769
22	23200444	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.32
22	23200803	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.153846
22	23200821	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.142857
22	23200822	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.285714
22	23203080	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.0645161
22	23296700	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.125
22	23297316	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.2
22	23297333	A->G	+	ENSG00000186716	BCR	protein_coding	Intergenic	.	.	Alu	0.2
22	24041975	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.333333
22	24041983	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.428571
22	24042045	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.2
22	24042052	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.181818
22	24042053	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.545455
22	24042116	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.142857
22	24042136	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	24042343	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.272727
22	24173580	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.538462
22	24173581	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.384615
22	24173657	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.181818
22	24173658	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.181818
22	24173669	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.133333
22	24173714	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.272727
22	24173737	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.217391
22	24173740	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.142857
22	24173755	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.190476
22	24174228	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.208333
22	24174241	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.684211
22	24174271	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.142857
22	24174312	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.2
22	24174314	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.181818
22	24174381	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.533333
22	24174390	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.142857
22	24371379	A->G	+	ENSG00000100014	SPECC1L	protein_coding	Intergenic	.	.	Alu	0.2
22	24544844	A->G	-	ENSG00000138867	GUCD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	24544845	A->G	-	ENSG00000138867	GUCD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	24552916	A->G	-	ENSG00000138867	GUCD1	protein_coding	Intergenic	.	.	Alu	0.3
22	24552921	A->G	-	ENSG00000138867	GUCD1	protein_coding	Intergenic	.	.	Alu	0.2
22	24552924	A->G	-	ENSG00000138867	GUCD1	protein_coding	Intergenic	.	.	Alu	0.4
22	24573867	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0625
22	25352111	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.294118
22	25370293	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.133333
22	25370298	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.142857
22	25397063	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.181818
22	25397514	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.181818
22	25397515	A->G	-	ENSG00000100068	LRP5L	protein_coding	Intergenic	.	.	Alu	0.25
22	26579128	A->G	-	ENSG00000128294	TPST2	protein_coding	Intergenic	.	.	Alu	0.2
22	26579129	A->G	-	ENSG00000128294	TPST2	protein_coding	Intergenic	.	.	Alu	0.2
22	26579135	A->G	-	ENSG00000128294	TPST2	protein_coding	Intergenic	.	.	Alu	0.272727
22	26587875	A->G	-	ENSG00000128294	TPST2	protein_coding	Intergenic	.	.	Alu	0.230769
22	27901679	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.181818
22	27909361	A->G	-	ENSG00000180957	PITPNB	protein_coding	Intergenic	.	.	Alu	0.166667
22	29180444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.075
22	29278915	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.2
22	29278916	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.181818
22	29280172	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0666667
22	29280773	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.2
22	29280774	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.2
22	29281198	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0869565
22	29281439	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.2
22	29287311	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.036036
22	29287312	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0384615
22	29287342	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0581395
22	29287897	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.271429
22	29287901	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0571429
22	29293287	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.105263
22	29295127	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.181818
22	29297178	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.333333
22	29505424	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
22	29505444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
22	29891704	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.25
22	29891707	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.416667
22	29913005	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.5
22	29977057	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.190476
22	29977109	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.1
22	29977110	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.1
22	29977145	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.136364
22	29977177	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.105263
22	29977181	A->G	+	ENSG00000100330	MTMR3	protein_coding	Intergenic	.	.	Alu	0.117647
22	30316283	A->G	-	ENSG00000099992	TBC1D10A	protein_coding	Intergenic	.	.	Alu	0.25
22	31285910	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0588235
22	31285928	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0645161
22	31285929	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0645161
22	31286206	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.12766
22	31286221	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.111111
22	31287089	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0731707
22	31287194	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0377358
22	31287199	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0377358
22	31287201	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0377358
22	31287215	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0789474
22	31287245	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0638298
22	31287508	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.1
22	31287511	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0512821
22	31288156	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0540541
22	31288159	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0789474
22	31288160	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0789474
22	31288180	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.25
22	31288360	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.176471
22	31479971	A->G	-	ENSG00000185721	DRG1	protein_coding	Intergenic	.	.	Alu	0.181818
22	31479991	A->G	-	ENSG00000185721	DRG1	protein_coding	Intergenic	.	.	Alu	0.384615
22	31483430	A->G	-	ENSG00000185721	DRG1	protein_coding	Intergenic	.	.	Alu	0.25
22	31607050	A->G	+	ENSG00000198089	SFI1	protein_coding	Intergenic	.	.	Alu	0.4
22	31634786	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.181818
22	31635054	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.538462
22	31645279	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.5
22	31645284	A->G	-	ENSG00000241878	PISD	protein_coding	Intergenic	.	.	Alu	0.166667
22	31740612	A->G	-	ENSG00000183530	PRR14L	protein_coding	Intergenic	.	.	Alu	0.3
22	31740636	A->G	-	ENSG00000183530	PRR14L	protein_coding	Intergenic	.	.	Alu	0.2
22	35269247	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.2
22	35269323	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.125
22	35269360	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.157895
22	35402218	A->G	+	ENSG00000100297	MCM5	protein_coding	Intergenic	.	.	Alu	0.2
22	35402744	A->G	+	ENSG00000100297	MCM5	protein_coding	Intergenic	.	.	Alu	0.357143
22	35402766	A->G	+	ENSG00000100297	MCM5	protein_coding	Intergenic	.	.	Alu	0.125
22	35654825	A->G	+	ENSG00000221963	APOL6	protein_coding	Intergenic	.	.	Alu	0.363636
22	35656037	A->G	+	ENSG00000221963	APOL6	protein_coding	Intergenic	.	.	Alu	0.7
22	36150101	A->G	-	ENSG00000128284	APOL3	protein_coding	Intergenic	.	.	Alu	0.181818
22	36152874	A->G	-	ENSG00000128284	APOL3	protein_coding	Intergenic	.	.	Alu	0.133333
22	36308473	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.388889
22	36310058	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.4
22	36310187	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.111111
22	36310305	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36310351	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.08
22	36338720	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.538462
22	36345892	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36345955	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.15
22	36346777	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.125
22	36346794	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.153846
22	36346878	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.214286
22	36347476	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.214286
22	36347568	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36347659	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.181818
22	36366025	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36366088	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.230769
22	36366112	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36371674	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.6
22	36371675	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.5
22	36372270	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.272727
22	36372442	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.363636
22	36517778	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.346154
22	36517845	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.0769231
22	36517926	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.136364
22	36517927	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.181818
22	36517930	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.272727
22	36518286	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.111111
22	36518323	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.2
22	36518334	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.222222
22	36518406	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.173913
22	36518411	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.125
22	37674592	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
22	37857932	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.636364
22	37857988	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.416667
22	37858055	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37858091	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.769231
22	37858096	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.142857
22	37858305	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37858324	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37858325	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.181818
22	37869036	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.2
22	37870863	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.2
22	37870892	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.466667
22	37871024	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.25
22	37871048	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.214286
22	37872187	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.307692
22	37872217	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.222222
22	37872218	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.210526
22	37872264	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.08
22	37872277	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.130435
22	37872345	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.133333
22	37872359	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.25
22	37872386	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.125
22	37872752	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.166667
22	37872823	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.125
22	37873089	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.0909091
22	37873662	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.117647
22	38269443	A->G	-	ENSG00000198792	TMEM184B	protein_coding	Intergenic	.	.	Alu	0.166667
22	38302635	A->G	-	ENSG00000213923	CSNK1E	protein_coding	Intergenic	.	.	Alu	0.5
22	38302659	A->G	-	ENSG00000213923	CSNK1E	protein_coding	Intergenic	.	.	Alu	0.3
22	38502193	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.12963
22	38502208	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.12
22	38502226	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0909091
22	38502291	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0731707
22	38502314	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0833333
22	38505005	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.139535
22	38505020	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.04
22	38505024	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0363636
22	38505025	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.06
22	38505037	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0392157
22	38505046	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0576923
22	38505047	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.117647
22	38505110	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.129032
22	38690499	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	38690519	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.166667
22	40049022	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40049279	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.210526
22	40049295	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.578947
22	40049300	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.157895
22	40049307	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.428571
22	40052677	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.1
22	40052701	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.166667
22	40054096	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40054828	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.125
22	40054900	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.105263
22	40061295	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.1
22	40062037	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.5
22	40062330	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.214286
22	40062429	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40067016	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.0869565
22	40071911	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.125
22	40071988	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.272727
22	40076278	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.125
22	40076296	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.166667
22	40076617	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40078266	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.285714
22	40078320	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.214286
22	40078453	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.428571
22	40078508	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.571429
22	40079760	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.230769
22	40091013	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40091062	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.166667
22	40092245	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40092250	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.230769
22	40092253	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.166667
22	40092282	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40092283	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.454545
22	40092288	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40092608	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.461538
22	40092642	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.153846
22	40092693	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40093862	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.555556
22	40098753	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40104166	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.3
22	40112987	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.363636
22	40126826	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.08
22	40126856	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40126865	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.1
22	40127663	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.2
22	40127854	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40127855	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40128805	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.125
22	40167804	A->G	+	ENSG00000100354	TNRC6B	protein_coding	Intergenic	.	.	Alu	0.181818
22	40953090	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.166667
22	40953091	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.08
22	40953108	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.0740741
22	40953117	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.103448
22	40953174	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	40953258	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.133333
22	40956551	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.2
22	40957765	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.181818
22	40960030	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.636364
22	40960032	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.454545
22	40960039	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.2
22	41099109	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.235294
22	41099145	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.105263
22	41100212	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.269231
22	41108484	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.166667
22	41118700	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.111111
22	41118728	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.111111
22	41120904	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.529412
22	41120931	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.105263
22	41136276	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.1875
22	41136540	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.2
22	41141730	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.4375
22	41141770	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.142857
22	41141789	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.111111
22	41141877	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.277778
22	41141942	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.0714286
22	41141945	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.0740741
22	41142713	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.153846
22	41143250	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.0909091
22	41143313	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.1875
22	41143625	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.133333
22	41143650	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.0689655
22	41143737	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.153846
22	41143788	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.111111
22	41143793	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.210526
22	41143841	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.117647
22	41154551	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.2
22	41259800	A->G	-	ENSG00000100401	RANGAP1	protein_coding	Intergenic	.	.	Alu	0.166667
22	41276529	A->G	-	ENSG00000100401	RANGAP1	protein_coding	Intergenic	.	.	Alu	0.153846
22	41463118	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.2
22	41463818	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.3125
22	41463834	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.235294
22	41463847	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.142857
22	41463850	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.153846
22	41463855	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.142857
22	41463872	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.133333
22	41465435	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.153846
22	41467138	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.181818
22	41472665	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.166667
22	41472710	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.133333
22	41472722	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.272727
22	41522128	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.416667
22	41522142	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.333333
22	41522143	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.272727
22	41522205	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.25
22	41522222	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.4375
22	41522226	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.411765
22	41522254	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.692308
22	41522260	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.5
22	41522321	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.0952381
22	41522327	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.136364
22	41530370	A->G	+	ENSG00000100413	POLR3H	protein_coding	Intergenic	.	.	Alu	0.142857
22	41623297	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.230769
22	41623801	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.2
22	41623820	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.166667
22	41624327	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.181818
22	41625493	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.142857
22	41677369	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.230769
22	41677401	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.142857
22	41838679	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.125
22	41843726	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.363636
22	41843739	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.461538
22	41843740	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.461538
22	41843785	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.153846
22	41845070	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.142857
22	41845203	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.3
22	41855313	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.2
22	41855332	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.5
22	41855868	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.2
22	41879129	A->G	+	ENSG00000198911	SREBF2	protein_coding	Intergenic	.	.	Alu	0.214286
22	42265338	A->G	-	ENSG00000100207	TCF20	protein_coding	Intergenic	.	.	Alu	0.153846
22	42517057	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.1875
22	42517061	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.117647
22	42588721	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.4
22	42588858	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.0869565
22	42588984	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.117647
22	42589038	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.25
22	42589121	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.6
22	42589186	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.545455
22	42590286	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.2
22	42590327	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.2
22	42590456	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.105263
22	42590820	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.153846
22	42594005	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.121212
22	42594017	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.0689655
22	42594018	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.1
22	42594077	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.111111
22	42594094	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.117647
22	42594480	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.4
22	42598579	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.4
22	42827825	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.153846
22	42827827	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.153846
22	42828761	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.3
22	42954026	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	42984251	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.166667
22	43006632	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.3
22	43006732	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	43006776	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.222222
22	43011782	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.2
22	43011921	A->G	-	ENSG00000100266	PACSIN2	protein_coding	Intergenic	.	.	Alu	0.333333
22	44678576	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.25
22	44678577	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.333333
22	44678589	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.166667
22	44693278	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.181818
22	44693285	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.3
22	44694909	A->G	+	ENSG00000186654	PRR5	protein_coding	Intergenic	.	.	Alu	0.166667
22	45333344	A->G	+	ENSG00000100376	FAM118A	protein_coding	Intergenic	.	.	Alu	0.3
22	46152920	A->G	+	ENSG00000186951	PPARA	protein_coding	Intergenic	.	.	Alu	0.153846
22	46729257	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.2
22	46733044	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.181818
22	46733785	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.125
22	46733797	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.148148
22	46733845	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.2
22	46733953	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.222222
22	49812201	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.384615
22	49812509	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.115385
22	49812519	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.296296
22	49812569	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0714286
22	49813362	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.166667
22	49813368	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.388889
22	49813417	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.388889
22	49813590	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.117647
22	49813669	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.166667
22	49813683	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.115385
22	49813684	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0833333
22	49813710	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.25
22	49813720	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.25
22	49813767	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.352941
22	49813772	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.470588
22	49813815	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.583333
22	49816681	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0851064
22	49816727	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.225
22	49816729	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.105263
22	49816731	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	49817908	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.117647
22	49817926	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.125
22	49817947	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.111111
22	49818643	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0869565
22	49818762	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0833333
22	49818764	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.16
22	49818777	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.115385
22	49819001	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0566038
22	49819015	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0377358
22	49819054	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0526316
22	49819055	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	49819090	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0666667
22	49819092	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0645161
22	49819177	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.114286
22	49819431	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.25
22	49819453	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	49819562	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.272727
22	49819588	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.466667
22	49819589	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.8
22	49819721	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0909091
22	49819728	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.6
22	49819730	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.217391
22	49819885	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0512821
22	49819886	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.102564
22	49819887	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0512821
22	49819990	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	49820014	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0714286
22	49820047	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.151515
22	49820538	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0689655
22	49821671	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.2
22	49822663	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0645161
22	49822674	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0666667
22	49822677	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.1875
22	49822696	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0555556
22	49859835	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.714286
22	49859847	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.142857
22	49859896	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.166667
22	49861378	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.333333
22	49871070	A->G	+	ENSG00000100426	ZBED4	protein_coding	Intergenic	.	.	Alu	0.3
22	50205376	A->G	+	ENSG00000073169	SELENOO	protein_coding	Intergenic	.	.	Alu	0.2
22	50205385	A->G	+	ENSG00000073169	SELENOO	protein_coding	Intergenic	.	.	Alu	0.166667
22	50207392	A->G	+	ENSG00000073169	SELENOO	protein_coding	Intergenic	.	.	Alu	0.153846
22	50373790	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.333333
22	50373795	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.181818
22	50373977	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.181818
22	50376200	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.272727
22	50376205	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.2
22	50376277	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.133333
22	50383003	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.272727
22	50383004	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.272727
22	50383120	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.142857
22	50384968	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.2
22	50384983	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.2
22	50385219	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.133333
22	50395585	A->G	+	ENSG00000100239	PPP6R2	protein_coding	Intergenic	.	.	Alu	0.3
22	50624104	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.166667
22	50624106	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.166667
22	50624132	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.692308
22	50624137	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.142857
22	50624168	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.545455
22	50708342	A->G	+	ENSG00000251322	SHANK3	protein_coding	Intergenic	.	.	Alu	0.285714
22	50708946	A->G	+	ENSG00000251322	SHANK3	protein_coding	Intergenic	.	.	Alu	0.454545
22	50708947	A->G	+	ENSG00000251322	SHANK3	protein_coding	Intergenic	.	.	Alu	0.363636
22	50708948	A->G	+	ENSG00000251322	SHANK3	protein_coding	Intergenic	.	.	Alu	0.181818
22	50708971	A->G	+	ENSG00000251322	SHANK3	protein_coding	Intergenic	.	.	Alu	0.153846
1	100281773	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.142857
1	100283060	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.2
1	100285674	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.25
1	100290493	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.533333
1	100290500	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.705882
1	100290542	A->G	+	ENSG00000137996	RTCA	protein_coding	Intergenic	.	.	Alu	0.162162
1	100393778	A->G	+	ENSG00000234332	BCAS2P2	processed_pseudogene	Intergenic	.	.	Alu	0.357143
1	100393792	A->G	+	ENSG00000234332	BCAS2P2	processed_pseudogene	Intergenic	.	.	Alu	0.466667
1	100394200	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.142857
1	100394214	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.4
1	100394215	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.428571
1	100394232	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.333333
1	100394282	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.1
1	100410028	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.294118
1	100410385	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.2
1	100410386	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.2
1	100410422	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.3
1	100424899	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.166667
1	100425131	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.357143
1	100426323	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.238095
1	100426348	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.1
1	100426352	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.333333
1	100429928	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.266667
1	100431770	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.142857
1	100436924	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.272727
1	100436987	A->G	+	ENSG00000079335	CDC14A	protein_coding	Intergenic	.	.	Alu	0.4
1	109063514	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0769231
1	109063550	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0833333
1	109063551	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.181818
1	109063580	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0869565
1	109063619	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0487805
1	109063684	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0689655
1	109072848	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.2
1	109072863	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.3
1	109407844	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.153846
1	109418131	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.166667
1	110036868	A->G	+	ENSG00000143093	STRIP1	protein_coding	Intergenic	.	.	Alu	0.2
1	110359431	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	110359530	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.142857
1	110359563	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.277778
1	110359569	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.166667
1	110360443	A->G	+	ENSG00000224699	LAMTOR5-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
1	110367385	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.6
1	110367387	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.3
1	110369538	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.5
1	110369539	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.2
1	110369554	A->G	+	ENSG00000168679	SLC16A4	protein_coding	Intergenic	.	.	Alu	0.3
1	110901650	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
1	110901665	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
1	111640778	A->G	+	ENSG00000116473	RAP1A	protein_coding	Intergenic	.	.	Alu	0.117647
1	112655216	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.272727
1	112655260	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112655324	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112655356	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112655366	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	112655392	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.470588
1	112655397	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.25
1	112655427	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	112655588	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	112655611	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0967742
1	112655632	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	112655637	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.26087
1	112655638	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	112655666	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	112655702	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.333333
1	112655735	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.272727
1	112662210	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	112662235	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.1
1	112662242	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0588235
1	112663091	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.153846
1	112663094	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.133333
1	112663727	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.230769
1	112663895	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.333333
1	112663942	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3125
1	112664854	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.214286
1	112664855	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	112664885	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.111111
1	112664887	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.157895
1	112664924	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.111111
1	112668739	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.181818
1	112668751	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112683470	A->G	+	ENSG00000155363	MOV10	protein_coding	Intergenic	.	.	Alu	0.133333
1	112924866	A->G	-	ENSG00000155380	SLC16A1	protein_coding	Intergenic	.	.	Alu	0.166667
1	113715398	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.15
1	113723469	A->G	-	ENSG00000116793	PHTF1	protein_coding	Intergenic	.	.	Alu	0.3
1	113855329	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.363636
1	113855338	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.384615
1	113855448	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.7
1	113856097	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.214286
1	113856143	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.1
1	113856179	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.5
1	113856182	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.210526
1	113856211	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.0869565
1	113856214	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.0952381
1	113856219	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.1
1	113856221	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.15
1	113903177	A->G	-	ENSG00000134262	AP4B1	protein_coding	Intergenic	.	.	Alu	0.272727
1	113939229	A->G	+	ENSG00000163349	HIPK1	protein_coding	Intergenic	.	.	Alu	0.153846
1	114713362	A->G	-	ENSG00000213281	NRAS	protein_coding	Intergenic	.	.	Alu	0.117647
1	114713390	A->G	-	ENSG00000213281	NRAS	protein_coding	Intergenic	.	.	Alu	0.176471
1	114744562	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0338983
1	114753657	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.105263
1	114753688	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.115385
1	114753804	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.333333
1	114753816	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.153846
1	114753833	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.107143
1	114753854	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.1
1	114754100	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0526316
1	114754127	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	114754265	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.357143
1	114754266	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.5
1	114754274	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.384615
1	117082711	A->G	+	ENSG00000116830	TTF2	protein_coding	Intergenic	.	.	Alu	0.5
1	117610640	A->G	+	ENSG00000183508	TENT5C	protein_coding	Intergenic	.	.	Alu	0.214286
1	145774990	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.142857
1	145775498	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145779329	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.181818
1	145779354	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.230769
1	145782451	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.588235
1	145782452	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.529412
1	145783071	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.15
1	145787329	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.166667
1	145787367	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145801520	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.153846
1	145812815	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145842890	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
1	145852252	A->G	-	ENSG00000131788	PIAS3	protein_coding	Intergenic	.	.	Alu	0.454545
1	145852256	A->G	-	ENSG00000131788	PIAS3	protein_coding	Intergenic	.	.	Alu	0.636364
1	145852823	A->G	-	ENSG00000131788	PIAS3	protein_coding	Intergenic	.	.	Alu	0.181818
1	145852838	A->G	-	ENSG00000131788	PIAS3	protein_coding	Intergenic	.	.	Alu	0.3
1	148427221	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
1	148427225	A->G	-	ENSG00000231551	AC245100.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
1	149887412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
1	149887468	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	149887489	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
1	150295675	A->G	+	ENSG00000266472	MRPS21	protein_coding	Intergenic	.	.	Alu	0.3
1	150335990	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.166667
1	150339102	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.166667
1	150339104	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.5
1	150340002	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.117647
1	150340702	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.153846
1	150340703	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.166667
1	150341951	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.230769
1	150341964	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.133333
1	150341966	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.133333
1	150341978	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.117647
1	150347469	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.2
1	150378727	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.2
1	150429545	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.181818
1	150429583	A->G	+	ENSG00000163125	RPRD2	protein_coding	Intergenic	.	.	Alu	0.181818
1	150570918	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
1	150612484	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150613260	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.3
1	150617346	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.15
1	150617416	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.3
1	150617756	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.157895
1	150617825	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.142857
1	150617853	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150617890	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150617909	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.142857
1	150617962	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150618249	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150618546	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.153846
1	150618563	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.153846
1	150619093	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150619099	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150619190	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.125
1	150620682	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.117647
1	150620706	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150620720	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.111111
1	150620749	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.166667
1	150620849	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.315789
1	150620917	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.125
1	150620953	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.583333
1	150620956	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.285714
1	150621021	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.117647
1	150621052	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150621056	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.153846
1	150931110	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.2
1	151319210	A->G	-	ENSG00000143393	PI4KB	protein_coding	Intergenic	.	.	Alu	0.166667
1	151434064	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
1	151434091	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.35
1	151434106	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.125
1	151434350	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.363636
1	151434352	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	151434362	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151434379	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.142857
1	151434398	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	151434417	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.25
1	151435070	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.142857
1	151435080	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151447135	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.3
1	151447206	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151447223	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.545455
1	151448361	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.285714
1	151448377	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.230769
1	151448382	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	151448419	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.4
1	151448782	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.272727
1	151450402	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151450420	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
1	151450445	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	151450468	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151452479	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.181818
1	153639871	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0952381
1	153639931	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.15
1	153639954	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.12
1	153639957	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.16
1	153639983	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.222222
1	153640026	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.1
1	153640035	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.153846
1	153640241	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.142857
1	153640242	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.130435
1	153640297	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.2
1	153640316	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.111111
1	153640317	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.111111
1	153640323	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.210526
1	153640551	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.111111
1	153640578	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.136364
1	153640593	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0952381
1	153640651	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.2
1	153669583	A->G	-	ENSG00000143621	ILF2	protein_coding	Intergenic	.	.	Alu	0.125
1	153669723	A->G	-	ENSG00000143621	ILF2	protein_coding	Intergenic	.	.	Alu	0.181818
1	153858651	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
1	153864432	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
1	153874978	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
1	153874988	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	153877633	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
1	153880781	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.125
1	153880855	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.133333
1	153890006	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
1	153895566	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.3
1	153898609	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.111111
1	153900381	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	153900546	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.133333
1	153900551	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.133333
1	153900576	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.357143
1	153900608	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	153900612	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
1	153900664	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.28
1	153901151	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	153901741	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
1	153901742	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
1	153902655	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	153902656	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.25
1	153902722	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.125
1	153902728	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	153902729	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.111111
1	153904129	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.117647
1	153904132	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.153846
1	153904158	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	153904171	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.2
1	153908259	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.272727
1	153908283	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.142857
1	153908302	A->G	-	ENSG00000143614	GATAD2B	protein_coding	Intergenic	.	.	Alu	0.117647
1	154163004	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.1
1	154163055	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.190476
1	154163064	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	154164333	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.15625
1	154164340	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.09375
1	154164419	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.258065
1	154164433	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.0909091
1	154165260	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.181818
1	154165299	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.157895
1	154173917	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.230769
1	154174235	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.142857
1	154174272	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.181818
1	154174662	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.2
1	154175953	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.2
1	154176857	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.0833333
1	154179846	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.0666667
1	154252759	A->G	+	ENSG00000143569	UBAP2L	protein_coding	Intergenic	.	.	Alu	0.142857
1	155475408	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.25
1	155539969	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.272727
1	155540017	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.4
1	155540019	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.2
1	155543254	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.235294
1	155543328	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.272727
1	155543883	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155547551	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.272727
1	155550960	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.3
1	155551048	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155551893	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.181818
1	155551900	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.181818
1	155553902	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.133333
1	155554182	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.117647
1	155554451	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.166667
1	155554584	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.2
1	155554655	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.111111
1	155556137	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.296296
1	155556152	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.538462
1	155556190	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.117647
1	155556289	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.304348
1	155556290	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.08
1	155556298	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.0833333
1	155556303	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.142857
1	155556814	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.636364
1	155556885	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.142857
1	155556886	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.666667
1	155556928	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.230769
1	155556929	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.384615
1	155556932	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.230769
1	155556933	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.307692
1	155558440	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.25
1	155558571	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.352941
1	155558572	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.176471
1	155558921	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.08
1	155559150	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.545455
1	155559452	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.363636
1	155559453	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.272727
1	155559483	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.2
1	155566423	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
1	155661788	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155661794	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155662247	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155662256	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155662308	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.333333
1	155662367	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.15
1	155662378	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.315789
1	155662383	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	155662738	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155662818	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.125
1	155664568	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.125
1	155665598	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155666888	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155667382	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.15
1	155667396	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	155668189	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.117647
1	155669310	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.157895
1	155669809	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.08
1	155669851	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	155669898	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.428571
1	155669901	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.214286
1	155670019	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.16
1	155670085	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0714286
1	155670086	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.115385
1	155671276	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	155671283	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.230769
1	155673286	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155673682	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155675596	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	155676100	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.3125
1	155680655	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	155680664	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.129032
1	155680713	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0606061
1	155680723	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.125
1	155680749	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	155680794	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	155680804	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	155680818	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.121212
1	155680822	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.151515
1	155681503	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0857143
1	155681551	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	155681583	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.375
1	155682827	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155682894	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155683431	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.2
1	155683484	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.1875
1	155683490	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	155683507	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	155683556	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.194444
1	155683573	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	155683612	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.139535
1	155683622	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.205128
1	155683894	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	155683950	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	155684003	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.12766
1	155684004	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.148936
1	155684030	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0526316
1	155684037	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155684076	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.4
1	155684148	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.157895
1	155684201	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	155684209	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.08
1	155684212	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.130435
1	155684765	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	155906960	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155907439	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.6
1	155908061	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155918324	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.166667
1	155918349	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.142857
1	155932877	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.333333
1	155932880	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.2
1	155932933	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.133333
1	155956630	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.166667
1	155956633	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.166667
1	155956639	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.142857
1	155956701	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.214286
1	155956764	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.3
1	156213473	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.153846
1	156213565	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.125
1	156214623	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.105263
1	156214658	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.1875
1	156214663	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.1875
1	156214718	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.181818
1	156214725	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.142857
1	156214730	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.166667
1	156214978	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.266667
1	156220226	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.3
1	156222524	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.181818
1	156225160	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.166667
1	156225161	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.5
1	156225162	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.333333
1	156225165	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.833333
1	156469318	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0625
1	156469325	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.303571
1	156469326	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.107143
1	156469354	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0612245
1	156469355	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0851064
1	156469422	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.275
1	156469474	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0681818
1	156469525	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0540541
1	156469644	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.3
1	156469645	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.166667
1	156469764	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.259259
1	156469774	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0740741
1	156469786	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.147059
1	156469799	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.108108
1	156469803	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.117647
1	156469804	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0967742
1	156469834	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.214286
1	156469842	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.08
1	156470256	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.291667
1	156470273	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.166667
1	156471268	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0769231
1	156471269	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0512821
1	156471295	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0769231
1	156471301	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0882353
1	156471302	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0526316
1	156471304	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0526316
1	156471327	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.222222
1	156474206	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0384615
1	156474266	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0606061
1	156474277	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0645161
1	156474301	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.111111
1	156474337	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.263158
1	156474367	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.30303
1	156474392	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0625
1	156474405	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0625
1	156474436	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.272727
1	156474796	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0465116
1	159011108	A->G	+	ENSG00000163565	IFI16	protein_coding	Intergenic	.	.	Alu	0.25
1	159011110	A->G	+	ENSG00000163565	IFI16	protein_coding	Intergenic	.	.	Alu	0.142857
1	159011197	A->G	+	ENSG00000163565	IFI16	protein_coding	Intergenic	.	.	Alu	0.0833333
1	160257937	A->G	-	ENSG00000132716	DCAF8	protein_coding	Intergenic	.	.	Alu	0.333333
1	160326756	A->G	-	ENSG00000122218	COPA	protein_coding	Intergenic	.	.	Alu	0.583333
1	161106848	A->G	-	ENSG00000143256	PFDN2	protein_coding	Intergenic	.	.	Alu	0.181818
1	161106874	A->G	-	ENSG00000143256	PFDN2	protein_coding	Intergenic	.	.	Alu	0.153846
1	161116802	A->G	-	ENSG00000143256	PFDN2	protein_coding	Intergenic	.	.	Alu	0.153846
1	161116805	A->G	-	ENSG00000143256	PFDN2	protein_coding	Intergenic	.	.	Alu	0.181818
1	161116826	A->G	-	ENSG00000143256	PFDN2	protein_coding	Intergenic	.	.	Alu	0.272727
1	161866827	A->G	+	ENSG00000118217	ATF6	protein_coding	Intergenic	.	.	Alu	0.636364
1	161866865	A->G	+	ENSG00000118217	ATF6	protein_coding	Intergenic	.	.	Alu	0.454545
1	165745093	A->G	-	ENSG00000143183	TMCO1	protein_coding	Intergenic	.	.	Alu	0.272727
1	167234637	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.4
1	167241933	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.538462
1	167241941	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.470588
1	167241983	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.230769
1	167241984	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.916667
1	167243260	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.714286
1	167243301	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.333333
1	167243302	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.461538
1	167243736	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.166667
1	167243738	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.142857
1	167243750	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.133333
1	167251925	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.272727
1	167252100	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.25
1	167252124	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.210526
1	167252130	A->G	+	ENSG00000143190	POU2F1	protein_coding	Intergenic	.	.	Alu	0.222222
1	167450411	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.181818
1	167450728	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.142857
1	167458765	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intergenic	.	.	Alu	0.176471
1	167458766	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intergenic	.	.	Alu	0.235294
1	167458770	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intergenic	.	.	Alu	0.352941
1	167459549	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intergenic	.	.	Alu	0.125
1	167459599	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intergenic	.	.	Alu	0.363636
1	167460167	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.181818
1	167469075	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.153846
1	167469085	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.142857
1	167476696	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.166667
1	167476702	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.181818
1	167476784	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.142857
1	167481024	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.0952381
1	167481030	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.08
1	167481057	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.0909091
1	167481107	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.142857
1	167481192	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.176471
1	167481204	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.277778
1	167481211	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.315789
1	167481224	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.1
1	167481235	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.315789
1	167487253	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.117647
1	167487255	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.2
1	167487269	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.153846
1	167487766	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.153846
1	167487809	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.230769
1	167487823	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.166667
1	167487855	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.166667
1	167487981	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.333333
1	167488005	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.2
1	167490715	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.352941
1	167490716	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.294118
1	167490767	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.0714286
1	167490803	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.08
1	167490831	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.173913
1	167490832	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.0869565
1	167490904	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.181818
1	167506959	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.133333
1	167506964	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.285714
1	167506969	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.142857
1	167506993	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.153846
1	167506999	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.5
1	167507035	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.571429
1	167507061	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.266667
1	167507191	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.307692
1	167507192	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.307692
1	167507577	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.222222
1	167507753	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.166667
1	167507754	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.166667
1	167507779	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.357143
1	168181269	A->G	+	ENSG00000143155	TIPRL	protein_coding	Intergenic	.	.	Alu	0.181818
1	168181979	A->G	+	ENSG00000143155	TIPRL	protein_coding	Intergenic	.	.	Alu	0.4
1	171487140	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.315789
1	171487155	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.1
1	171487652	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0666667
1	171487653	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.159091
1	171487735	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.125
1	171487738	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.242424
1	171493573	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.2
1	171493587	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.8
1	171496840	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
1	171496849	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.125
1	171496881	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0869565
1	171496981	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.176471
1	171500536	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.172414
1	171501351	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0666667
1	171502895	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.380952
1	171502943	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.111111
1	171503282	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.25
1	171507409	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.1
1	171507490	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.125
1	171527507	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.3
1	171527515	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.3
1	171546740	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.172414
1	171546743	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.714286
1	171546801	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.208333
1	171546803	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.08
1	171546804	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.24
1	171546853	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.15
1	171547020	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0833333
1	171547026	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.2
1	171547031	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.09375
1	171547783	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.0588235
1	171577877	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.3
1	171577878	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.272727
1	171578025	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
1	171578031	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.181818
1	171578351	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.142857
1	172546011	A->G	+	ENSG00000094975	SUCO	protein_coding	Intergenic	.	.	Alu	0.266667
1	172546048	A->G	+	ENSG00000094975	SUCO	protein_coding	Intergenic	.	.	Alu	0.285714
1	172546075	A->G	+	ENSG00000094975	SUCO	protein_coding	Intergenic	.	.	Alu	0.214286
1	172546749	A->G	+	ENSG00000094975	SUCO	protein_coding	Intergenic	.	.	Alu	0.230769
1	172546788	A->G	+	ENSG00000094975	SUCO	protein_coding	Intergenic	.	.	Alu	0.363636
1	172546824	A->G	+	ENSG00000094975	SUCO	protein_coding	Intergenic	.	.	Alu	0.2
1	173722186	A->G	+	ENSG00000076321	KLHL20	protein_coding	Intergenic	.	.	Alu	0.272727
1	173722187	A->G	+	ENSG00000076321	KLHL20	protein_coding	Intergenic	.	.	Alu	0.166667
1	173722372	A->G	+	ENSG00000076321	KLHL20	protein_coding	Intergenic	.	.	Alu	0.2
1	173863138	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
1	173979483	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.166667
1	173990982	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.25
1	173991073	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.3
1	173993505	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.583333
1	173994271	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.222222
1	173994307	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.1
1	173994310	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.117647
1	173997143	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.133333
1	173997218	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.133333
1	173998969	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.117647
1	173998972	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.1
1	173998994	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.111111
1	173998999	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.105263
1	173999217	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
1	173999223	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.142857
1	174002935	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.636364
1	174004250	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.176471
1	174004252	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.235294
1	174004488	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.25
1	174004735	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.2
1	174006131	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.117647
1	174007498	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.238095
1	174007579	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.153846
1	174007588	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.416667
1	174007631	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.25
1	174007632	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.125
1	174007633	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.117647
1	174007643	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.105263
1	174007677	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.230769
1	174007685	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.3125
1	174009716	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.1
1	174009755	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.166667
1	174010543	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
1	174010641	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.130435
1	174010660	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.12
1	174012594	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
1	174020791	A->G	-	ENSG00000135870	RC3H1	protein_coding	Intergenic	.	.	Alu	0.1
1	174851730	A->G	+	ENSG00000152061	RABGAP1L	protein_coding	Intergenic	.	.	Alu	0.181818
1	174851756	A->G	+	ENSG00000152061	RABGAP1L	protein_coding	Intergenic	.	.	Alu	0.2
1	175975694	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	175975704	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	175976567	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.3
1	176020060	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	176064659	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	176069125	A->G	-	ENSG00000143207	COP1	protein_coding	Intergenic	.	.	Alu	0.3
1	179328120	A->G	+	ENSG00000057252	SOAT1	protein_coding	Intergenic	.	.	Alu	0.3
1	179328123	A->G	+	ENSG00000057252	SOAT1	protein_coding	Intergenic	.	.	Alu	0.2
1	179328124	A->G	+	ENSG00000057252	SOAT1	protein_coding	Intergenic	.	.	Alu	0.5
1	179890858	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	179890859	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	179908888	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	179908911	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.2
1	179908954	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	179908957	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.2
1	179908978	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.2
1	179909510	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	179909638	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	179909640	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.125
1	179909824	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.4
1	179909832	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.363636
1	179909964	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.75
1	179909973	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	179910038	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.136364
1	182863918	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0588235
1	182863921	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0588235
1	182863932	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0487805
1	182863963	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0909091
1	182863970	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.258065
1	182863971	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0666667
1	182863995	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0606061
1	182864198	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0425532
1	182864281	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.333333
1	182869861	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0952381
1	182869874	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.125
1	182872069	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.0416667
1	183521781	A->G	+	ENSG00000116698	SMG7	protein_coding	Intergenic	.	.	Alu	0.272727
1	184937286	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.133333
1	184952304	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.111111
1	184958243	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.133333
1	184958251	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.133333
1	184958253	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.133333
1	184958263	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.166667
1	184958292	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.133333
1	184958337	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.157895
1	184958811	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.466667
1	184958888	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.5625
1	184958893	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.3125
1	184960705	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.0869565
1	184969781	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.0714286
1	184969811	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.352941
1	184969903	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.0555556
1	184969921	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.0740741
1	184969969	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.296296
1	184969974	A->G	-	ENSG00000135842	FAM129A	protein_coding	Intergenic	.	.	Alu	0.208333
1	185056428	A->G	+	ENSG00000121481	RNF2	protein_coding	Intergenic	.	.	Alu	0.363636
1	185290097	A->G	-	ENSG00000116668	SWT1	protein_coding	Intergenic	.	.	Alu	0.3
1	186409088	A->G	+	ENSG00000157181	ODR4	protein_coding	Intergenic	.	.	Alu	0.166667
1	193163386	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.272727
1	193168689	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.181818
1	193168690	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.181818
1	193168759	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.166667
1	193168777	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.307692
1	193169311	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.25
1	193169422	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.272727
1	193169470	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.125
1	193191606	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.181818
1	193191620	A->G	+	ENSG00000134371	CDC73	protein_coding	Intergenic	.	.	Alu	0.2
1	197771014	A->G	-	ENSG00000213047	DENND1B	protein_coding	Intergenic	.	.	Alu	0.166667
1	198666178	A->G	+	ENSG00000261573	AL157402.2	antisense	Intergenic	.	.	Alu	0.0588235
1	198668235	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.0526316
1	198680346	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.153846
1	198680373	A->G	+	ENSG00000081237	PTPRC	protein_coding	Intergenic	.	.	Alu	0.142857
1	200657506	A->G	-	ENSG00000118197	DDX59	protein_coding	Intergenic	.	.	Alu	0.6
1	200658574	A->G	-	ENSG00000118197	DDX59	protein_coding	Intergenic	.	.	Alu	0.153846
1	200658596	A->G	-	ENSG00000118197	DDX59	protein_coding	Intergenic	.	.	Alu	0.2
1	200658601	A->G	-	ENSG00000118197	DDX59	protein_coding	Intergenic	.	.	Alu	0.2
1	200658627	A->G	-	ENSG00000118197	DDX59	protein_coding	Intergenic	.	.	Alu	0.1
1	200658699	A->G	-	ENSG00000118197	DDX59	protein_coding	Intergenic	.	.	Alu	0.3
1	201959235	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.111111
1	201959249	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.0952381
1	201959321	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.2
1	201959720	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.222222
1	201959725	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.117647
1	201959746	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.133333
1	201959787	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.125
1	201959796	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.105263
1	201959956	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.0740741
1	201960136	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.153846
1	201960138	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.583333
1	201960199	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.181818
1	201960235	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.333333
1	201961012	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.153846
1	201961192	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.2
1	201961329	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.133333
1	201961335	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.1875
1	201961576	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.0689655
1	201961577	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.0689655
1	201961583	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.103448
1	201961590	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.444444
1	201961596	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.238095
1	202136966	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.133333
1	202137436	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.3
1	202137503	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.0952381
1	202137515	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.333333
1	202137532	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.15
1	202137551	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.133333
1	202137589	A->G	-	ENSG00000143862	ARL8A	protein_coding	Intergenic	.	.	Alu	0.153846
1	202149552	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.0952381
1	202149610	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.125
1	202769158	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.142857
1	202769582	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.0833333
1	202769625	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.25
1	202769647	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.545455
1	202776766	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.166667
1	202776815	A->G	-	ENSG00000117139	KDM5B	protein_coding	Intergenic	.	.	Alu	0.166667
1	202948868	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.111111
1	202948951	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.166667
1	203009492	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.133333
1	203014609	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.181818
1	203022168	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.181818
1	203022234	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.230769
1	203022238	A->G	+	ENSG00000163444	TMEM183A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203776267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	203776270	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
1	203809073	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203809379	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.181818
1	203809397	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.214286
1	203809399	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.214286
1	203809729	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.454545
1	203810662	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.133333
1	203812052	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.1
1	203812765	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203812779	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.181818
1	203814854	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.428571
1	203814904	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.0909091
1	203815050	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.125
1	203816442	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.117647
1	203816482	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.117647
1	203816492	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.133333
1	203819484	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.153846
1	203837700	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.230769
1	203851410	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.2
1	204400350	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.153846
1	204527415	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.230769
1	204534513	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.310345
1	204534536	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.34375
1	204534588	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0714286
1	204534591	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.148148
1	204534600	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.2
1	204534653	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.111111
1	204534675	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0689655
1	204535422	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0740741
1	204535650	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.363636
1	204535698	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.333333
1	204535699	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.133333
1	204535780	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.230769
1	204535802	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.125
1	204536006	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.142857
1	204536007	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.380952
1	204536012	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.238095
1	204536042	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.533333
1	204536050	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.133333
1	204536129	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.2
1	204536141	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.153846
1	204536158	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.133333
1	204536167	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.117647
1	204536184	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.1875
1	204536197	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.346154
1	204536204	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.1
1	204536234	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0740741
1	205729958	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.3
1	205734078	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.384615
1	205734174	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.181818
1	205736076	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.4
1	205736169	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.454545
1	205736170	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.333333
1	205736224	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.105263
1	205736566	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.5
1	205736568	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.5
1	205738523	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.3
1	205740397	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.125
1	205740621	A->G	-	ENSG00000069275	NUCKS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	206561759	A->G	+	ENSG00000266094	RASSF5	protein_coding	Intergenic	.	.	Alu	0.142857
1	206561770	A->G	+	ENSG00000266094	RASSF5	protein_coding	Intergenic	.	.	Alu	0.133333
1	206711728	A->G	+	ENSG00000162889	MAPKAPK2	protein_coding	Intergenic	.	.	Alu	0.08
1	206711751	A->G	+	ENSG00000162889	MAPKAPK2	protein_coding	Intergenic	.	.	Alu	0.142857
1	206712859	A->G	+	ENSG00000162889	MAPKAPK2	protein_coding	Intergenic	.	.	Alu	0.181818
1	211262309	A->G	+	ENSG00000117625	RCOR3	protein_coding	Intergenic	.	.	Alu	0.235294
1	211264628	A->G	+	ENSG00000117625	RCOR3	protein_coding	Intergenic	.	.	Alu	0.3
1	211264629	A->G	+	ENSG00000117625	RCOR3	protein_coding	Intergenic	.	.	Alu	0.181818
1	211825921	A->G	-	ENSG00000123684	LPGAT1	protein_coding	Intergenic	.	.	Alu	0.363636
1	212330272	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.2
1	212330320	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.307692
1	212330469	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.0909091
1	212331260	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.384615
1	212331261	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.214286
1	212331294	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.2
1	212331378	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.181818
1	212331389	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.2
1	212331437	A->G	+	ENSG00000234915	AL360091.3	antisense	Intergenic	.	.	Alu	0.230769
1	212334395	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.111111
1	212336277	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.153846
1	212336290	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.125
1	212336299	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.153846
1	212338522	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.266667
1	212338543	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.111111
1	212338601	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.153846
1	212341743	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.153846
1	212344065	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.125
1	212344072	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.25
1	212344154	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.3
1	212344163	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.4
1	212351528	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.1
1	212351563	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.166667
1	212352158	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.1875
1	212352290	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.111111
1	212352297	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.5
1	212352654	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.153846
1	212352657	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.333333
1	212352724	A->G	+	ENSG00000066027	PPP2R5A	protein_coding	Intergenic	.	.	Alu	0.0869565
1	212756347	A->G	-	ENSG00000117697	NSL1	protein_coding	Intergenic	.	.	Alu	0.2
1	217604094	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.2
1	217604106	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.2
1	217604121	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.4
1	217604148	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.454545
1	217604269	A->G	-	ENSG00000092978	GPATCH2	protein_coding	Intergenic	.	.	Alu	0.3
1	222714790	A->G	+	ENSG00000162819	BROX	protein_coding	Intergenic	.	.	Alu	0.411765
1	222714794	A->G	+	ENSG00000162819	BROX	protein_coding	Intergenic	.	.	Alu	0.529412
1	223786718	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	223786739	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.08
1	223786745	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.2
1	223786835	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.214286
1	223786878	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.125
1	223786879	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.1875
1	223787334	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	223787510	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	223787703	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.266667
1	223787778	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	223787783	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.142857
1	223787803	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.230769
1	223790291	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.190476
1	223790410	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	223790436	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.111111
1	223790442	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.384615
1	223790449	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.148148
1	223790458	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	223790543	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.333333
1	223790652	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.25
1	223790736	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.25
1	223790742	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.777778
1	223790771	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	223790772	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.15
1	223790774	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.1
1	223790785	A->G	-	ENSG00000143514	TP53BP2	protein_coding	Intergenic	.	.	Alu	0.1
1	224135812	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.2
1	224136881	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.2
1	224137435	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.166667
1	224391569	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0869565
1	224391599	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.111111
1	224391642	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.153846
1	224391664	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.315789
1	224391665	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.421053
1	224396771	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.133333
1	224397279	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.148148
1	224397282	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0740741
1	224399888	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0952381
1	224399889	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.285714
1	224399936	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.714286
1	224399941	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.666667
1	224400818	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.181818
1	224400841	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.2
1	224411784	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.541667
1	224411798	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.115385
1	224411834	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.111111
1	224411838	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0909091
1	224411870	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0909091
1	224411925	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.125
1	224411950	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.0512821
1	224414729	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.125
1	224416421	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.166667
1	224426100	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.142857
1	225784509	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.2
1	225788331	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.4
1	225788349	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.733333
1	225788358	A->G	+	ENSG00000143742	SRP9	protein_coding	Intergenic	.	.	Alu	0.4
1	225863246	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.4
1	225863248	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.181818
1	225863250	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.166667
1	225863264	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intergenic	.	.	Alu	0.5
1	225997527	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.0740741
1	225997578	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.135135
1	225997594	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.212121
1	225997635	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.0857143
1	225997673	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.363636
1	225997691	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.25
1	225997697	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	225997726	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.136364
1	225997896	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.277778
1	225997964	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.117647
1	225997970	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.15
1	225997992	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.142857
1	225998044	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.473684
1	225998045	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.222222
1	225998089	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.25
1	225998090	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.105263
1	226067619	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.0645161
1	226067621	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.0625
1	226067622	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.125
1	226067634	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.0833333
1	226067661	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.0740741
1	226067674	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.0952381
1	226183664	A->G	-	ENSG00000182827	ACBD3	protein_coding	Intergenic	.	.	Alu	0.2
1	226720807	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.111111
1	226726485	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.133333
1	226729758	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.142857
1	226729761	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.153846
1	226729803	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.166667
1	226732355	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.0909091
1	229480779	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.3
1	229481613	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.454545
1	229481616	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.818182
1	229481617	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.636364
1	229483159	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.166667
1	229483161	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.363636
1	229483177	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.166667
1	235115379	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.238095
1	235115385	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.190476
1	235117375	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.181818
1	235126548	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.2
1	235126570	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.416667
1	235126717	A->G	-	ENSG00000173726	TOMM20	protein_coding	Intergenic	.	.	Alu	0.272727
1	235133289	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.176471
1	235142341	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.6
1	235142344	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.454545
1	235142346	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.416667
1	235142393	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.2
1	235142816	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.153846
1	235142820	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.384615
1	235142846	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.166667
1	235145545	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.2
1	235145551	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.153846
1	235150271	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.166667
1	235150278	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.142857
1	235153603	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.2
1	235153629	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.214286
1	235153630	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.214286
1	235153698	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.357143
1	235153699	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.153846
1	235153705	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.166667
1	235154442	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.153846
1	235154464	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.357143
1	235154481	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.3
1	235154502	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.133333
1	235154520	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.25
1	235154542	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.142857
1	235154548	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.117647
1	235160142	A->G	-	ENSG00000188739	RBM34	protein_coding	Intergenic	.	.	Alu	0.0606061
1	235169865	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235172326	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.333333
1	235172422	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235174688	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1875
1	235174690	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.235294
1	235201523	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.7
1	235210035	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235212182	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.176471
1	235212183	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.117647
1	235212188	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.176471
1	235231689	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235231760	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235232612	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.117647
1	235232618	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235233309	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.272727
1	235238638	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1
1	235238659	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.263158
1	235238793	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.157895
1	235238802	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235238824	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.214286
1	235247905	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.25
1	235248203	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.4
1	235248238	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235257610	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.25
1	235257645	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235257674	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235257675	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.133333
1	235258285	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.222222
1	235258328	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.111111
1	235283903	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235283974	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235284657	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235287072	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235287135	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235295292	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0952381
1	235296544	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235296548	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235299036	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.130435
1	235300159	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235303544	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.130435
1	235303600	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.157895
1	235304301	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235306322	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.25
1	235306339	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.25
1	235306355	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.375
1	235306390	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235306459	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.3
1	235306776	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.5
1	235306823	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.117647
1	235306851	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.111111
1	235306853	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.111111
1	235307411	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.176471
1	235307423	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235310762	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235310766	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.307692
1	235311582	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.105263
1	235312810	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.142857
1	235312916	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235313086	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235313125	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.1875
1	235313198	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0952381
1	235313200	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0952381
1	235313205	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.363636
1	235313206	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.217391
1	235313257	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.5
1	235318876	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.157895
1	235320183	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.2
1	235320222	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.0833333
1	235826850	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0869565
1	235826901	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.125
1	235827105	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0540541
1	235827284	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.142857
1	235827306	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.125
1	235827331	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.230769
1	235827343	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0588235
1	235827355	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0540541
1	235857042	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.153846
1	235861748	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.173913
1	235861787	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.25
1	236569402	A->G	-	ENSG00000119285	HEATR1	protein_coding	Intergenic	.	.	Alu	0.176471
1	236601344	A->G	-	ENSG00000119285	HEATR1	protein_coding	Intergenic	.	.	Alu	0.2
1	236601634	A->G	-	ENSG00000119285	HEATR1	protein_coding	Intergenic	.	.	Alu	0.2
1	236799397	A->G	+	ENSG00000116984	MTR	protein_coding	Intergenic	.	.	Alu	0.0740741
1	236799400	A->G	+	ENSG00000116984	MTR	protein_coding	Intergenic	.	.	Alu	0.0769231
1	243243741	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.5
1	243244498	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.2
1	243244540	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.166667
1	243244626	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.125
1	243244663	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.1875
1	243244664	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.266667
1	243244684	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.142857
1	243244689	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.230769
1	243246284	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.153846
1	243247421	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.25
1	243247422	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.25
1	243249169	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.3125
1	243249175	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.111111
1	243249191	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.0869565
1	243249208	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.0833333
1	243249209	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.125
1	243249234	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.105263
1	243249293	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.176471
1	243249296	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.111111
1	243249332	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.153846
1	243249382	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.3
1	244420904	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.25
1	244420957	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.142857
1	244420958	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.714286
1	244420964	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.538462
1	244421722	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.190476
1	244421734	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.2
1	244421985	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.2
1	244421995	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.307692
1	246560929	A->G	-	ENSG00000162851	TFB2M	protein_coding	Intergenic	.	.	Alu	0.3
1	246601095	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.2
1	246621739	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.181818
1	246661332	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.363636
1	246661353	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.181818
1	246870340	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.153846
1	246870371	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.181818
1	246922194	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	246922197	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.181818
1	246922297	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.4
1	246922338	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.125
1	246922352	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.153846
1	246922455	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.176471
1	246922589	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.133333
1	246922597	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.142857
1	246922613	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.214286
1	246929370	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.125
1	246929382	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.115385
1	246929872	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.307692
1	246930277	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0645161
1	246930289	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	246930671	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0540541
1	246930685	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0869565
1	246930686	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.0681818
1	246930702	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.454545
1	247128611	A->G	+	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.8
1	247155657	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.153846
1	247205786	A->G	-	ENSG00000227671	AL390728.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
1	247205820	A->G	-	ENSG00000227671	AL390728.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
1	247205824	A->G	-	ENSG00000227671	AL390728.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
1	247205847	A->G	-	ENSG00000227671	AL390728.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
1	247206915	A->G	-	ENSG00000227671	AL390728.4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
1	247870751	A->G	+	ENSG00000162722	TRIM58	protein_coding	Intergenic	.	.	Alu	0.25
2	101275242	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.025974
2	101275398	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0606061
2	101275722	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0769231
2	101277547	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.5
2	101277548	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.2
2	101281028	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.266667
2	101284425	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.416667
2	101284459	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.208333
2	101284464	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101284469	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.130435
2	101284498	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.368421
2	101284573	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.176471
2	101284992	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.176471
2	101285006	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.133333
2	101285018	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1875
2	101285019	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.133333
2	101285091	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1875
2	101285117	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.272727
2	101287320	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0666667
2	101288060	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0769231
2	101288083	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0909091
2	101288310	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0689655
2	101292151	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.4375
2	101296077	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.166667
2	101297477	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.166667
2	101297517	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.111111
2	101297558	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.157895
2	101298228	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.307692
2	101298229	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.153846
2	101298249	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.2
2	101298349	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.285714
2	101298384	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.181818
2	101300642	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.25
2	101300644	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.125
2	101301585	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.266667
2	101302858	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.105263
2	101302894	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.130435
2	101302928	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.173913
2	101302966	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.105263
2	101302975	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.125
2	101303188	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.142857
2	101303254	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1
2	101303730	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1875
2	101304229	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.111111
2	101304230	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.277778
2	101304353	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.117647
2	101307240	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.117647
2	101307406	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.26087
2	101307452	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.117647
2	101854478	A->G	+	ENSG00000071054	MAP4K4	protein_coding	Intergenic	.	.	Alu	0.363636
2	105749901	A->G	+	ENSG00000071051	NCK2	protein_coding	Intergenic	.	.	Alu	0.111111
2	105749910	A->G	+	ENSG00000071051	NCK2	protein_coding	Intergenic	.	.	Alu	0.105263
2	105749951	A->G	+	ENSG00000071051	NCK2	protein_coding	Intergenic	.	.	Alu	0.1
2	108455439	A->G	+	ENSG00000135968	GCC2	protein_coding	Intergenic	.	.	Alu	0.153846
2	108537091	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.416667
2	108544634	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
2	108569835	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.2
2	108721482	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108721515	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.105263
2	108737612	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.363636
2	108738728	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	108738729	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108738732	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.32
2	108738733	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.08
2	108738839	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.133333
2	108739857	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.2
2	108739868	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	108739881	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.153846
2	108741219	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	108741719	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.115385
2	108742319	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.153846
2	108742324	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.272727
2	108742421	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0731707
2	108742443	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0882353
2	108742487	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0576923
2	108742489	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0666667
2	108742511	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.169811
2	108742547	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0862069
2	108742566	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0307692
2	108742584	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.03125
2	108742808	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.451613
2	108742820	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.12
2	108742850	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108742869	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.1
2	108742906	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.185185
2	108742918	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.129032
2	108742996	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.3125
2	108743036	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.166667
2	108743051	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	108743065	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108743541	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0425532
2	108744146	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108744194	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.105263
2	108744217	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108744218	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.176471
2	108744227	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.111111
2	108744257	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.192308
2	108744265	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.16
2	108744283	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.12
2	108744284	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.16
2	108744325	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.173913
2	108744338	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.1
2	108744345	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.15
2	108744355	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.130435
2	108744356	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	108773193	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0967742
2	108773211	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	108774339	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.1
2	108816971	A->G	+	ENSG00000163006	CCDC138	protein_coding	Intergenic	.	.	Alu	0.2
2	112409534	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.272727
2	112409538	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.12
2	112409552	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.107143
2	112409580	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.15
2	112410552	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.0869565
2	112410588	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.0689655
2	112654641	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.583333
2	112654642	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	112654647	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	112654709	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	112654811	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	112654848	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	112655073	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	112655086	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	112655134	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	112655135	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.5
2	112655149	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.227273
2	112655221	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.268293
2	112655245	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.25641
2	113584966	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
2	113585454	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
2	113710628	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.181818
2	113748040	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113748263	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113748326	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.6
2	113748361	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113749257	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.166667
2	113749258	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.176471
2	113749259	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.166667
2	113749284	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.222222
2	113749328	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.75
2	113749334	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.210526
2	113749414	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.352941
2	113749417	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.444444
2	113749436	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.176471
2	113749485	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.384615
2	113749493	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.416667
2	113749510	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.2
2	113751022	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.0869565
2	113751033	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.333333
2	113933253	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.222222
2	113933460	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.3
2	113933733	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.230769
2	113936127	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0740741
2	113948249	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	113948267	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	113948324	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.111111
2	113948336	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.176471
2	113949724	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0769231
2	113949728	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.0740741
2	117964898	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.133333
2	117992448	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.166667
2	117993802	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.125
2	118010053	A->G	-	ENSG00000235066	AC009303.2	antisense	Intergenic	.	.	Alu	0.3
2	127332950	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.142857
2	127333021	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.25
2	127333999	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127334004	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.133333
2	127334012	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.133333
2	127334037	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.208333
2	127334038	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.12
2	127334066	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.304348
2	127334086	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127334534	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127343797	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.272727
2	127343871	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.25
2	127343912	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127343953	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127344584	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.142857
2	127344901	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.12
2	127344948	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.173913
2	127344953	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	127344961	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.571429
2	127345003	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.176471
2	127345016	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.125
2	127345029	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.125
2	127345086	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	127345091	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.458333
2	127345097	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	127345114	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127348153	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.357143
2	127348374	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127348391	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.125
2	127349365	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.107143
2	127349393	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	127352015	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.142857
2	127352127	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127361057	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.1
2	127363160	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.157895
2	127363167	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.190476
2	127363781	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.294118
2	127363795	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.333333
2	127363875	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127364877	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.176471
2	127364945	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.117647
2	127365006	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.3
2	127366905	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127368065	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.142857
2	127368096	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127368239	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.1875
2	127368844	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.1
2	127375440	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0769231
2	127375444	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0714286
2	127375446	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.482759
2	127375498	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.315789
2	127375506	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.157895
2	127375507	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.45
2	127375580	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127375586	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.166667
2	127375672	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.125
2	127375675	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.1875
2	127376949	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127377004	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	127377042	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.866667
2	127377052	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.125
2	127377055	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.176471
2	127382799	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127749266	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.166667
2	127749290	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.15
2	127749316	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.294118
2	127749865	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.181818
2	127750056	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.153846
2	127752962	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.181818
2	127794455	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.125
2	127796346	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.263158
2	127801703	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.153846
2	127802728	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.307692
2	127805997	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.2
2	127807943	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.105263
2	127807959	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.0769231
2	127872106	A->G	-	ENSG00000144233	AMMECR1L	protein_coding	Intergenic	.	.	Alu	0.2
2	130158008	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.15
2	130158021	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.0769231
2	130158024	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.666667
2	130158058	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.2
2	130158096	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.375
2	130158131	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.157895
2	130158484	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.4
2	130158485	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.4
2	130158560	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.176471
2	130159035	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.5625
2	130159080	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.722222
2	130159084	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.111111
2	130159092	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.25
2	130159123	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.142857
2	130159127	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.4375
2	130159165	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.157895
2	130159173	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.111111
2	130159176	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.3125
2	130159222	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.181818
2	130159421	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.25
2	130159422	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.181818
2	130159454	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.7
2	130159459	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.214286
2	130165849	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.454545
2	130170648	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.2
2	130170663	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.2
2	130170961	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.181818
2	130170966	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.454545
2	131068297	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.181818
2	131068341	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.181818
2	131068377	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131068410	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131073899	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.647059
2	131078741	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.214286
2	131078754	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.133333
2	131078874	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131080896	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.153846
2	131080904	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.181818
2	131084861	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.1
2	131084883	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	131084914	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.0625
2	131084974	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.2
2	131087251	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.0606061
2	131088041	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.230769
2	131088083	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.285714
2	131088098	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131088124	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131088184	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.142857
2	131089104	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.166667
2	131089105	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.153846
2	131089131	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.214286
2	131089159	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.153846
2	131090648	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.181818
2	131090649	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.363636
2	131091885	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.0645161
2	131109078	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.111111
2	131109107	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.125
2	131109673	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.133333
2	131113195	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.181818
2	131113287	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.461538
2	131113293	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.357143
2	131117333	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.2
2	131145410	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.272727
2	131145441	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.3
2	131146035	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.636364
2	131496548	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.4
2	131501801	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	1
2	131503247	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131503255	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131503305	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.133333
2	131503937	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.37037
2	131505059	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.0869565
2	131505064	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.0833333
2	131505081	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.0833333
2	131505154	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.111111
2	131505328	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.214286
2	131505335	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
2	131505520	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.384615
2	131505543	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.142857
2	131505558	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.25
2	131505599	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
2	131505621	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.230769
2	131505623	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.153846
2	131505627	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.230769
2	131505639	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
2	131505647	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.133333
2	131505836	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.4
2	131505928	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.3
2	131505943	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.181818
2	131506611	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.285714
2	131507670	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.285714
2	131507671	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.333333
2	131507704	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131507726	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.416667
2	131507745	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.133333
2	131507751	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.142857
2	131507801	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.4
2	131508105	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131513383	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.6875
2	131513393	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.823529
2	131513432	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.117647
2	131513458	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.8
2	131513461	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.8
2	131513477	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.117647
2	131513484	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.111111
2	131513497	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.1
2	131513514	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.266667
2	131513528	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.666667
2	131513540	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.176471
2	131513565	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.176471
2	131513593	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131513862	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
2	131513866	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.4
2	131513896	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131513897	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
2	131513909	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.125
2	131513929	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.545455
2	131513940	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.25
2	131513959	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.461538
2	131514434	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.1875
2	131514546	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.363636
2	131514554	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.363636
2	131514581	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.117647
2	131514851	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.1
2	131514862	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.210526
2	131514880	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.357143
2	131514898	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.5
2	131514936	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.16
2	131514970	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.666667
2	131514986	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.130435
2	131515053	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.136364
2	134923012	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.272727
2	134929913	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.153846
2	134929931	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.333333
2	134949114	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.181818
2	134950060	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.117647
2	135103305	A->G	+	ENSG00000115839	RAB3GAP1	protein_coding	Intergenic	.	.	Alu	0.636364
2	135746017	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.5
2	135746019	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.5
2	135746043	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.111111
2	135746058	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0909091
2	135746075	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0909091
2	135747145	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0731707
2	135747146	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0666667
2	135748714	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.133333
2	135750160	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.133333
2	135751127	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.2
2	135751395	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.210526
2	135751449	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0909091
2	135751450	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0909091
2	135751462	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.125
2	135759873	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.2
2	135759977	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.2
2	135760161	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.294118
2	135760168	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.117647
2	135760197	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.25
2	135760268	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.12
2	135760271	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.461538
2	135760272	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.230769
2	135760273	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.0769231
2	135760275	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.28
2	135760414	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.235294
2	135769026	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.181818
2	143272375	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.272727
2	143272376	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.3
2	143737939	A->G	+	ENSG00000257277	AC092652.2	antisense	Intergenic	.	.	Alu	0.2
2	143737967	A->G	+	ENSG00000257277	AC092652.2	antisense	Intergenic	.	.	Alu	0.272727
2	143737978	A->G	+	ENSG00000257277	AC092652.2	antisense	Intergenic	.	.	Alu	0.25
2	144314468	A->G	-	ENSG00000121964	GTDC1	protein_coding	Intergenic	.	.	Alu	0.153846
2	148647407	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	148696187	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.214286
2	148696267	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.08
2	148728069	A->G	+	ENSG00000135999	EPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	151420550	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	151420554	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.368421
2	151420590	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.142857
2	151420616	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.181818
2	151421612	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.176471
2	151421615	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.444444
2	151421706	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.142857
2	151422032	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	151422034	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.133333
2	151422600	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.142857
2	151422604	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.142857
2	151422617	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.133333
2	151422791	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.1
2	151424284	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	151424301	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.230769
2	151424363	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	151424364	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	151426746	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	151426747	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.272727
2	151426776	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.25
2	151426786	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.333333
2	151426808	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	151426827	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	151427235	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.125
2	151427243	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.1875
2	151427310	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	151428095	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.2
2	152709917	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.4
2	152709920	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.133333
2	152709943	A->G	-	ENSG00000196504	PRPF40A	protein_coding	Intergenic	.	.	Alu	0.153846
2	157328658	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
2	157328701	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
2	157331043	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
2	157331113	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
2	157331151	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
2	157345443	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
2	157350063	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
2	157353527	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
2	157353881	A->G	-	.	.	.	Intergenic	.	.	Alu	0.178571
2	157353913	A->G	-	.	.	.	Intergenic	.	.	Alu	0.192308
2	157353968	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
2	157354131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
2	157361895	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
2	157362725	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
2	159714648	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.137931
2	159715464	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.3
2	159716391	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0952381
2	159716418	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.105263
2	159716503	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.08
2	159716529	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.25
2	159716539	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
2	159716575	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.214286
2	159730983	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0588235
2	159730990	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.05
2	159731026	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0857143
2	159731103	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0769231
2	159731491	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0909091
2	159731499	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.380952
2	159731526	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.181818
2	159731564	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.2
2	159731633	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.111111
2	159732741	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.08
2	159732806	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.517241
2	159732808	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.178571
2	159732812	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.206897
2	159733296	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.08
2	159733338	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0869565
2	159736486	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.307692
2	159736487	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.444444
2	159742784	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.2
2	159742830	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.2
2	159870329	A->G	-	ENSG00000054219	LY75	protein_coding	Intergenic	.	.	Alu	0.272727
2	159870343	A->G	-	ENSG00000054219	LY75	protein_coding	Intergenic	.	.	Alu	0.333333
2	159870364	A->G	-	ENSG00000054219	LY75	protein_coding	Intergenic	.	.	Alu	0.25
2	159870365	A->G	-	ENSG00000054219	LY75	protein_coding	Intergenic	.	.	Alu	0.416667
2	161153318	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.454545
2	161153319	A->G	+	ENSG00000224467	AC009313.1	antisense	Intergenic	.	.	Alu	0.363636
2	161166673	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.105263
2	161166778	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.111111
2	161167697	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.117647
2	161167749	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.0952381
2	161167762	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.315789
2	161167765	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.166667
2	161167766	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.166667
2	161167799	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.166667
2	161167898	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.181818
2	161167901	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.25
2	161168631	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.181818
2	161168647	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.153846
2	161168683	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.125
2	161168686	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.25
2	161168713	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.133333
2	161168775	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.357143
2	161205824	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.153846
2	161205829	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.166667
2	165768012	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.173913
2	165768891	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.363636
2	165768892	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.181818
2	165769491	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.25
2	165769562	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.545455
2	165769585	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.4
2	165769591	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.428571
2	165769646	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.0740741
2	165923080	A->G	-	ENSG00000123607	TTC21B	protein_coding	Intergenic	.	.	Alu	0.37037
2	165923124	A->G	-	ENSG00000123607	TTC21B	protein_coding	Intergenic	.	.	Alu	0.352941
2	165923176	A->G	-	ENSG00000123607	TTC21B	protein_coding	Intergenic	.	.	Alu	0.5
2	169624079	A->G	+	ENSG00000138398	PPIG	protein_coding	Intergenic	.	.	Alu	0.181818
2	170932061	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.4
2	170932064	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.2
2	170943910	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.2
2	170945251	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.2
2	170946277	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.266667
2	170947998	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.2
2	170952745	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.136364
2	170952755	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.363636
2	170952793	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.153846
2	170952890	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.363636
2	170952910	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.454545
2	170952911	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.363636
2	170952914	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.4
2	170953194	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.428571
2	170953195	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.285714
2	170953276	A->G	+	ENSG00000115806	GORASP2	protein_coding	Intergenic	.	.	Alu	0.230769
2	170999819	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.272727
2	171005502	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.210526
2	171005619	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.230769
2	171005624	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.181818
2	171005671	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	171123325	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.181818
2	171123334	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.545455
2	171123370	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.5
2	171123420	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.272727
2	171149784	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	171151098	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.133333
2	171151156	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	171151164	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	171151225	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	171151232	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.142857
2	171926754	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.25
2	171928948	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.7
2	171929030	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.272727
2	171930231	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.363636
2	171931130	A->G	+	ENSG00000115840	SLC25A12	protein_coding	Intergenic	.	.	Alu	0.142857
2	172576133	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.545455
2	172584784	A->G	+	ENSG00000152256	PDK1	protein_coding	Intergenic	.	.	Alu	0.2
2	173921591	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.277778
2	173921633	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.181818
2	173926596	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.230769
2	173927051	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.125
2	173927103	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.157895
2	173931455	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.111111
2	173931623	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.1875
2	173932369	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0487805
2	173932372	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.121951
2	173932447	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0857143
2	173932463	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0384615
2	173932464	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0377358
2	173932748	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.190476
2	173932749	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	173932825	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.3
2	173932880	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.142857
2	173932892	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.130435
2	173932910	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.16
2	173932945	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.147059
2	173932985	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.05
2	173935229	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.105263
2	173938240	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0645161
2	173938333	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.181818
2	173943532	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.05
2	173945882	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0606061
2	173946070	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	174198000	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.2
2	174209043	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.117647
2	174209081	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.117647
2	174216618	A->G	-	ENSG00000138430	OLA1	protein_coding	Intergenic	.	.	Alu	0.2
2	174352492	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.136364
2	174353725	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.166667
2	174356221	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	174356222	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.222222
2	174356273	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.2
2	174356286	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.230769
2	174356294	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.142857
2	174356300	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.142857
2	174368574	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	174368650	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.111111
2	174370322	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.0857143
2	174372783	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	174375893	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	174375894	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	174375901	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.208333
2	174375919	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.173913
2	174375948	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.117647
2	174376134	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.368421
2	174376541	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	174376608	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.307692
2	174377560	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.16129
2	174377572	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	174377646	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.217391
2	174377743	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.133333
2	174377778	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.142857
2	174384671	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.153846
2	174385012	A->G	-	ENSG00000138433	CIR1	protein_coding	Intergenic	.	.	Alu	0.538462
2	174576081	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.133333
2	174577669	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.1
2	174577708	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.133333
2	174577797	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.3
2	174579140	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.181818
2	174579155	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.285714
2	174579278	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.142857
2	174580089	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.2
2	174580099	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.133333
2	174580188	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.166667
2	174580209	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.142857
2	174629137	A->G	-	ENSG00000236449	AC010894.3	antisense	Intergenic	.	.	Alu	0.133333
2	175141507	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.214286
2	175157738	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.181818
2	175157951	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.25
2	175158318	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.380952
2	175158323	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.2
2	175158328	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.318182
2	175158354	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.5
2	175158397	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.153846
2	175158398	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.153846
2	175158440	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.333333
2	175158441	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.166667
2	175159219	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.416667
2	175159233	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.153846
2	175160167	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.368421
2	175160168	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.111111
2	175160916	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.277778
2	175160939	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.125
2	175161036	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.2
2	175163687	A->G	-	ENSG00000115966	ATF2	protein_coding	Intergenic	.	.	Alu	0.1
2	177214540	A->G	+	ENSG00000170144	HNRNPA3	protein_coding	Intergenic	.	.	Alu	0.3
2	177243731	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.35
2	177244071	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.214286
2	177247417	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.111111
2	177248987	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.1875
2	177249051	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.368421
2	177249108	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.157895
2	178434134	A->G	+	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.4
2	178434271	A->G	-	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.133333
2	178434557	A->G	-	ENSG00000223960	AC009948.1	antisense	Intergenic	.	.	Alu	0.214286
2	186501776	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.214286
2	186501781	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.153846
2	186501811	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.1875
2	186501829	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.266667
2	186502149	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.2
2	186502168	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.5
2	186502327	A->G	+	ENSG00000065548	ZC3H15	protein_coding	Intergenic	.	.	Alu	0.3
2	186628545	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.5
2	186628625	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.5
2	187539995	A->G	-	ENSG00000224063	AC007319.1	antisense	Intergenic	.	.	Alu	0.3
2	189774251	A->G	-	ENSG00000128699	ORMDL1	protein_coding	Intergenic	.	.	Alu	0.181818
2	190885331	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.25
2	190885337	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.142857
2	190885370	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.1
2	190885424	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.0377358
2	190885464	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.0545455
2	190885466	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.037037
2	190886078	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.0784314
2	190886145	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.0227273
2	190886147	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.021978
2	190886661	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.0882353
2	190924794	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.125
2	190924870	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.142857
2	190930332	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.111111
2	191011516	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.521739
2	191011551	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.314286
2	191011557	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.171429
2	191011950	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	191011983	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0512821
2	191012170	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.15
2	191012196	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.270833
2	191012221	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.405405
2	191012329	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.12766
2	191012333	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	191012334	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	191012353	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.183673
2	191012408	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.285714
2	191073430	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.272727
2	191073436	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.181818
2	191073442	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.416667
2	191073443	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.333333
2	191074943	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	191074944	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	191075129	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.2
2	196142082	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0588235
2	196142150	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.222222
2	196142187	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.2
2	196142197	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.1875
2	196142223	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.153846
2	196158902	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0952381
2	196159408	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.1
2	196159558	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0740741
2	196159585	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0810811
2	196161591	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.153846
2	196996654	A->G	-	ENSG00000065413	ANKRD44	protein_coding	Intergenic	.	.	Alu	0.454545
2	196996662	A->G	-	ENSG00000065413	ANKRD44	protein_coding	Intergenic	.	.	Alu	0.454545
2	197274843	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.272727
2	197274876	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.166667
2	197274978	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.2
2	197274993	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.25
2	197274994	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.272727
2	197276019	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.153846
2	197284267	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.130435
2	197290091	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.2
2	197290873	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
2	197291081	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.153846
2	197291087	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.142857
2	197291293	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
2	197291466	A->G	-	ENSG00000236977	ANKRD44-IT1	sense_intronic	Intergenic	.	.	Alu	0.1875
2	197304071	A->G	-	ENSG00000065413	ANKRD44	protein_coding	Intergenic	.	.	Alu	0.0740741
2	197465638	A->G	+	ENSG00000115520	COQ10B	protein_coding	Intergenic	.	.	Alu	0.142857
2	197468304	A->G	+	ENSG00000115520	COQ10B	protein_coding	Intergenic	.	.	Alu	0.181818
2	197469317	A->G	+	ENSG00000115520	COQ10B	protein_coding	Intergenic	.	.	Alu	0.285714
2	197475714	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	197491921	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.357143
2	197491946	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.4375
2	197492000	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.125
2	197492001	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.333333
2	197492049	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	197492075	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.12
2	197492293	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.157895
2	197492327	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.6875
2	197492328	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.125
2	197492360	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.105263
2	197519076	A->G	+	ENSG00000270757	HSPE1-MOB4	protein_coding	Intergenic	.	.	Alu	0.1
2	197519101	A->G	+	ENSG00000270757	HSPE1-MOB4	protein_coding	Intergenic	.	.	Alu	0.333333
2	199937625	A->G	-	ENSG00000178074	C2orf69	protein_coding	Intergenic	.	.	Alu	0.2
2	199965551	A->G	+	ENSG00000162972	MAIP1	protein_coding	Intergenic	.	.	Alu	0.1
2	199965646	A->G	+	ENSG00000162972	MAIP1	protein_coding	Intergenic	.	.	Alu	0.047619
2	199965647	A->G	+	ENSG00000162972	MAIP1	protein_coding	Intergenic	.	.	Alu	0.097561
2	199969557	A->G	+	ENSG00000162972	MAIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	199974850	A->G	+	ENSG00000162972	MAIP1	protein_coding	Intergenic	.	.	Alu	0.181818
2	199974896	A->G	+	ENSG00000162972	MAIP1	protein_coding	Intergenic	.	.	Alu	0.25
2	200819701	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.181818
2	200821608	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0857143
2	200855217	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0416667
2	200855231	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0487805
2	200855744	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0307692
2	200855750	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0357143
2	200855764	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.04
2	200855765	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0851064
2	200855806	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.047619
2	200855825	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.230769
2	200856242	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.25
2	200856247	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.125
2	200856248	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.125
2	201134054	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.142857
2	201134094	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.153846
2	201134100	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.176471
2	201134114	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.176471
2	201134159	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.142857
2	201135847	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.3
2	201135861	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.272727
2	201135862	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.272727
2	201142851	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.333333
2	201142861	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.125
2	202229179	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.3
2	202229180	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.3
2	202234745	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.7
2	202235670	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.166667
2	202237300	A->G	-	ENSG00000116030	SUMO1	protein_coding	Intergenic	.	.	Alu	0.142857
2	202275722	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.277778
2	202275769	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.24
2	202275849	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.2
2	202276177	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.115385
2	202276178	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0769231
2	202279673	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.3
2	202279726	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.25
2	202280229	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.151515
2	202280245	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0769231
2	202283347	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.153846
2	202284941	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.130435
2	202284999	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0571429
2	202285174	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0769231
2	202285203	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0689655
2	202285488	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.09375
2	202285519	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0882353
2	202286321	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.176471
2	202287334	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0952381
2	202288020	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.111111
2	202290013	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.217391
2	202290054	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.111111
2	202290085	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.266667
2	202290130	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.208333
2	202290136	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0869565
2	202290139	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.08
2	202290153	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0952381
2	202291551	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.136364
2	202291616	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0909091
2	202291696	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.15
2	202292203	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
2	202294886	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
2	202298486	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0645161
2	202299021	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.195122
2	202299064	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.135135
2	202731698	A->G	+	ENSG00000138439	FAM117B	protein_coding	Intergenic	.	.	Alu	0.153846
2	203273719	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203299699	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203300706	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203300996	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203301117	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203301301	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203301326	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.357143
2	203301371	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203301383	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203301393	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203302381	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3
2	203302467	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203302968	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203304404	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.9
2	203304745	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203707064	A->G	+	ENSG00000178562	CD28	protein_coding	Intergenic	.	.	Alu	0.0769231
2	203707073	A->G	+	ENSG00000178562	CD28	protein_coding	Intergenic	.	.	Alu	0.0714286
2	206018208	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.666667
2	206018213	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.388889
2	206018217	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.529412
2	206018282	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.272727
2	206018283	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.3
2	206018319	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.5
2	206018635	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.272727
2	206018691	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206018701	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206018903	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.166667
2	206025995	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.105263
2	206026094	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206044141	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206068171	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.1
2	206068206	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.125
2	206068296	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.1
2	206068349	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0769231
2	206068389	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0952381
2	206069495	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.172414
2	206072349	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.142857
2	206072550	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.181818
2	206072551	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.363636
2	206073110	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.1
2	206073544	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0869565
2	206073545	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0869565
2	206073611	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.0952381
2	206073788	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.181818
2	206074497	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.166667
2	206075466	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.157895
2	206075469	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.428571
2	206075472	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.285714
2	206075502	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.222222
2	206075930	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206075969	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.133333
2	206078561	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.190476
2	206078625	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.181818
2	206078703	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.3
2	206078748	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.307692
2	206078753	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.133333
2	206078857	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.3125
2	206078860	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.1875
2	206079188	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.444444
2	206079197	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.153846
2	206079248	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.2
2	206079346	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.133333
2	206081508	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.176471
2	206081581	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.173913
2	206081587	A->G	-	ENSG00000114933	INO80D	protein_coding	Intergenic	.	.	Alu	0.136364
2	207109972	A->G	-	ENSG00000118263	KLF7	protein_coding	Intergenic	.	.	Alu	0.25
2	208308243	A->G	+	ENSG00000115020	PIKFYVE	protein_coding	Intergenic	.	.	Alu	0.4
2	208308329	A->G	+	ENSG00000115020	PIKFYVE	protein_coding	Intergenic	.	.	Alu	0.166667
2	210003098	A->G	+	ENSG00000197713	RPE	protein_coding	Intergenic	.	.	Alu	0.526316
2	215986629	A->G	-	ENSG00000118242	MREG	protein_coding	Intergenic	.	.	Alu	0.25
2	216123550	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.272727
2	216141867	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.181818
2	216141920	A->G	+	ENSG00000079246	XRCC5	protein_coding	Intergenic	.	.	Alu	0.2
2	218227443	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.172414
2	218227455	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.484848
2	218227512	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.388889
2	218227526	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.114286
2	218227527	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.171429
2	218227552	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0666667
2	218230116	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0810811
2	218230431	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.133333
2	218230480	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.135135
2	218230519	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0555556
2	218230785	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0333333
2	218232007	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	218232053	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	218232054	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.16
2	218232064	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	218232114	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.1875
2	218232121	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.375
2	218232649	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218232695	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.176471
2	218232699	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.411765
2	218232709	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.285714
2	218232731	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	218232783	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.47619
2	218232787	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	218232837	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0434783
2	218232850	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.319149
2	218232859	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0444444
2	218236737	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0555556
2	218236744	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0434783
2	218236747	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.111111
2	218236780	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.235294
2	218236781	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0769231
2	218236783	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0444444
2	218237222	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.111111
2	218237225	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0517241
2	218237230	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0625
2	218237286	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0512821
2	218237299	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0392157
2	218237300	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0392157
2	218237339	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0731707
2	218237361	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.225
2	218237382	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.121212
2	218237401	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.25
2	218237438	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0327869
2	218237442	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0483871
2	218237446	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0322581
2	218237461	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0322581
2	218237647	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.153846
2	218237700	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	218237706	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.133333
2	218237750	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.318182
2	218237756	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.35
2	218237776	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0789474
2	218237802	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0612245
2	218237815	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0612245
2	218237829	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.04
2	218237842	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0333333
2	218237858	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.122807
2	218237860	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0338983
2	218247538	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218247796	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	218247822	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	218247855	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218247885	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218247887	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218251459	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.166667
2	218252089	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.307692
2	218252102	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218252103	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218254766	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	218565095	A->G	-	ENSG00000135913	USP37	protein_coding	Intergenic	.	.	Alu	0.2
2	218571689	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.125
2	218571690	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.125
2	218572304	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.111111
2	218572472	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.133333
2	218572477	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.285714
2	219226415	A->G	-	ENSG00000198925	ATG9A	protein_coding	Intergenic	.	.	Alu	0.133333
2	224508738	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.125
2	224508794	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.157895
2	224508804	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.55
2	224508813	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.3125
2	224508850	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.4
2	224508899	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.117647
2	224509327	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0681818
2	224509334	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.05
2	224509381	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.137931
2	224509390	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.130435
2	224509392	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.130435
2	224509393	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0869565
2	224509394	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.26087
2	224509399	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.304348
2	224509410	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0869565
2	224515932	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.1
2	224515971	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.117647
2	224517488	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.25
2	224517493	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224517507	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224517516	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224517561	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.130435
2	224517573	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.08
2	224517591	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0909091
2	224517630	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.111111
2	224517663	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.45
2	224517664	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.136364
2	224521502	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224521556	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.117647
2	224521563	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.15
2	224521568	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.190476
2	224521632	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0555556
2	224521634	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.105263
2	224521635	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.102564
2	224522638	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.217391
2	224522660	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0869565
2	224522716	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.3
2	224522744	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224522814	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.4
2	224529370	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.157895
2	224529374	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.105263
2	224529572	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224529577	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.25
2	224530650	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	224530672	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0909091
2	224530783	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0689655
2	224530791	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0689655
2	224530825	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.217391
2	224531155	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.15
2	224531156	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.105263
2	224531161	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.111111
2	224531173	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.136364
2	224531215	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	224531224	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.12
2	224531227	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.25
2	224531256	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.12
2	224531258	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.192308
2	224531261	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0833333
2	224531264	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.08
2	224531265	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.08
2	224531281	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.107143
2	224531283	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.275862
2	224531292	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.434783
2	224531311	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0967742
2	224535224	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0769231
2	224535255	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.178571
2	224535295	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0857143
2	224535311	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.178571
2	224535312	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.0714286
2	224567382	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224567398	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.1875
2	224580536	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.115385
2	224580562	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.136364
2	224580627	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.111111
2	224581153	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.142857
2	224581309	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224581352	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224581358	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224581570	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224581605	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.333333
2	224581663	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.117647
2	224581673	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.176471
2	224581728	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.190476
2	224582085	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.272727
2	224582093	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224583325	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.133333
2	229831462	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.125
2	229831549	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	229833320	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	229833322	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.266667
2	229833324	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.214286
2	229833325	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.416667
2	229833370	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.5
2	229833385	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.916667
2	229833399	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.3
2	229833412	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.142857
2	229833416	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.142857
2	229833465	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.166667
2	229833490	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.461538
2	229833507	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.125
2	229833513	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.470588
2	229833516	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.625
2	229833573	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.136364
2	229834648	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.0952381
2	229834652	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.0869565
2	229834677	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.0909091
2	229893912	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.111111
2	229913116	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.142857
2	229915131	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.133333
2	229915165	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.15
2	229915967	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.454545
2	229915968	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.454545
2	229916492	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.2
2	229917860	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.272727
2	230715881	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.230769
2	230728089	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.142857
2	230730177	A->G	+	ENSG00000135932	CAB39	protein_coding	Intergenic	.	.	Alu	0.363636
2	233066154	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.117647
2	233066879	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233068187	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233070571	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233071012	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.307692
2	233071035	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.272727
2	233071142	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233071166	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233071168	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.230769
2	233085372	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233087995	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233088037	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.3
2	233088038	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.3
2	233132958	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.3
2	233132974	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.272727
2	233133167	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233133168	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233133207	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233139006	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233142192	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	1
2	233158991	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.125
2	233159533	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.105263
2	233205888	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233205917	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.181818
2	233256841	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.230769
2	233257745	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.153846
2	233287640	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.2
2	233288419	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.384615
2	233288427	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.4
2	233288448	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.153846
2	233288502	A->G	+	ENSG00000085978	ATG16L1	protein_coding	Intergenic	.	.	Alu	0.166667
2	233360350	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.166667
2	237704217	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	237704246	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.166667
2	237704354	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.1
2	237704374	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	237705385	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.15
2	237705406	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.08
2	237705407	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.2
2	237705452	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.15
2	237705483	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	237705500	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.130435
2	237705504	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.16
2	237705507	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	237705543	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.107143
2	237706651	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.212121
2	237706659	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0625
2	237706667	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.21875
2	237706705	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.357143
2	237706721	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.266667
2	237706728	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.142857
2	237706753	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.363636
2	237710033	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0847458
2	237710034	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0806452
2	237710129	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0447761
2	237710913	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0289855
2	237710940	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0344828
2	237710950	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0350877
2	237710954	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0517241
2	237710967	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.106061
2	237711057	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0338983
2	237734410	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.125
2	237734436	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.2
2	237734464	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.181818
2	238184328	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.133333
2	238184767	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.0769231
2	238189304	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.04
2	238191028	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.111111
2	238191184	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.166667
2	238191245	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.0952381
2	238191246	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.0952381
2	238191296	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.103448
2	238191341	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.195122
2	238191343	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.097561
2	238192150	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.0645161
2	238192771	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.117647
2	238192780	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.111111
2	238193476	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.538462
2	238193496	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.214286
2	240002207	A->G	-	ENSG00000130414	NDUFA10	protein_coding	Intergenic	.	.	Alu	0.272727
2	240002219	A->G	-	ENSG00000130414	NDUFA10	protein_coding	Intergenic	.	.	Alu	0.166667
2	241318770	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
2	241319678	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.117647
2	241319692	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.117647
2	241319731	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.117647
2	241319777	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.111111
2	241320530	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.2
2	241320556	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.3
2	241320629	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.125
2	241320630	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.125
2	241320633	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
2	241320669	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.272727
2	241320695	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.2
2	241320717	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
2	241320721	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.25
2	241320741	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.105263
2	241320749	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.1
2	241323520	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
2	241328382	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.2
2	241328732	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.2
2	241328775	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.272727
2	241329396	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.285714
2	241331032	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.538462
2	241664274	A->G	+	ENSG00000168397	ATG4B	protein_coding	Intergenic	.	.	Alu	0.2
3	100286572	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0909091
3	100286577	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.130435
3	100286578	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.181818
3	100286639	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.1
3	100286872	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0714286
3	100286916	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0833333
3	100287015	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.12
3	100287132	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.133333
3	100287161	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.380952
3	100287168	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.181818
3	100287212	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0833333
3	100287213	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.24
3	100287238	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.142857
3	100287239	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.32
3	100287254	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.142857
3	100287809	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.285714
3	100287854	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.108108
3	100287871	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.212121
3	100287883	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0606061
3	100287969	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0625
3	100288147	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.1875
3	100289092	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.166667
3	100291349	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.2
3	100291373	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.181818
3	100291375	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.181818
3	100291399	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.272727
3	100291417	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.454545
3	100291420	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.166667
3	100291461	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.3
3	100291462	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.3
3	100291865	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.133333
3	100292039	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.3125
3	100314557	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.230769
3	101583701	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.5
3	101583777	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.3
3	101583941	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.166667
3	101584916	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.5
3	101584991	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.133333
3	101586668	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.111111
3	101586788	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.230769
3	101661029	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.3
3	101662244	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.2
3	101668379	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.285714
3	101668388	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.357143
3	101668448	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.230769
3	101668462	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.181818
3	101673742	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.181818
3	101680682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
3	105848985	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.103448
3	105849539	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.545455
3	105849540	A->G	-	ENSG00000114423	CBLB	protein_coding	Intergenic	.	.	Alu	0.666667
3	107559982	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.142857
3	107586851	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.142857
3	107586890	A->G	+	ENSG00000114439	BBX	protein_coding	Intergenic	.	.	Alu	0.272727
3	108831778	A->G	+	ENSG00000163519	TRAT1	protein_coding	Intergenic	.	.	Alu	0.263158
3	113726559	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.333333
3	113726564	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.230769
3	113726570	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.1875
3	113726581	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.333333
3	113726616	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.166667
3	113726632	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.357143
3	113726661	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.333333
3	113726902	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.3
3	113730055	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.111111
3	113730056	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.105263
3	113730103	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.2
3	114348937	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.272727
3	114348943	A->G	-	ENSG00000181722	ZBTB20	protein_coding	Intergenic	.	.	Alu	0.454545
3	119303875	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.272727
3	119303924	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.166667
3	119303934	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.166667
3	119308920	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.4
3	119445361	A->G	-	ENSG00000176142	TMEM39A	protein_coding	Intergenic	.	.	Alu	0.235294
3	119445376	A->G	-	ENSG00000176142	TMEM39A	protein_coding	Intergenic	.	.	Alu	0.235294
3	119445402	A->G	-	ENSG00000176142	TMEM39A	protein_coding	Intergenic	.	.	Alu	0.166667
3	119995078	A->G	-	ENSG00000082701	GSK3B	protein_coding	Intergenic	.	.	Alu	0.3
3	120074177	A->G	-	ENSG00000082701	GSK3B	protein_coding	Intergenic	.	.	Alu	0.230769
3	121833226	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.666667
3	121833836	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.25
3	121833912	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.7
3	121833929	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.230769
3	122557848	A->G	-	ENSG00000138496	PARP9	protein_coding	Intergenic	.	.	Alu	0.5
3	122702317	A->G	+	ENSG00000173193	PARP14	protein_coding	Intergenic	.	.	Alu	0.153846
3	123211529	A->G	+	ENSG00000065485	PDIA5	protein_coding	Intergenic	.	.	Alu	0.2
3	125350233	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.4
3	125353727	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.2
3	125355636	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.25
3	125364275	A->G	-	ENSG00000163848	ZNF148	protein_coding	Intergenic	.	.	Alu	0.363636
3	125449359	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.230769
3	125455905	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.818182
3	125462555	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.2
3	125462557	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.3
3	125463987	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.3
3	125467672	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.2
3	125484322	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.3
3	125484448	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.181818
3	125484449	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.181818
3	125505035	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.153846
3	125506671	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.2
3	125509701	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.2
3	125512817	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.181818
3	125512900	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.125
3	125512911	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.111111
3	125512927	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.0909091
3	125513075	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.384615
3	125513132	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.5625
3	125513133	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.5625
3	125513134	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.176471
3	125513143	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.176471
3	125513177	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.461538
3	125513310	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.4
3	125513869	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.5
3	125513902	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.333333
3	125514003	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.466667
3	125514007	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.666667
3	125514082	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.692308
3	125514093	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.357143
3	125514113	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.1875
3	125514808	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.307692
3	125514816	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.181818
3	125514923	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.5
3	125515305	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.5
3	125515306	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.166667
3	125515403	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.153846
3	125515405	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.153846
3	125515444	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.176471
3	125515553	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.2
3	125515603	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.153846
3	125515626	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.5
3	125515788	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.136364
3	125515803	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.105263
3	125515842	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.125
3	125515876	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.166667
3	125516784	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.133333
3	125516800	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.230769
3	125519115	A->G	-	ENSG00000114520	SNX4	protein_coding	Intergenic	.	.	Alu	0.210526
3	128621391	A->G	-	ENSG00000163902	RPN1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	128728511	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.230769
3	128728563	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.142857
3	128728567	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.142857
3	128732752	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0952381
3	128737057	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.153846
3	128737584	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0869565
3	128741581	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0952381
3	128741837	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.125
3	128741857	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0909091
3	128741872	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.130435
3	128741921	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0714286
3	128741934	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.157895
3	128743664	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.315789
3	128743681	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.272727
3	128743689	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0833333
3	128743703	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.16
3	128743869	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128744023	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.142857
3	128744060	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.166667
3	128744063	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0833333
3	128744954	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128745389	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.166667
3	128745626	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0555556
3	128745640	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.0555556
3	128747045	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.125
3	128747052	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.117647
3	128747122	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.166667
3	128747125	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.08
3	128747212	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.153846
3	128756205	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	128756207	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.181818
3	129111997	A->G	-	ENSG00000172780	RAB43	protein_coding	Intergenic	.	.	Alu	0.363636
3	129179095	A->G	-	ENSG00000169714	CNBP	protein_coding	Intergenic	.	.	Alu	0.117647
3	130712586	A->G	-	ENSG00000196455	PIK3R4	protein_coding	Intergenic	.	.	Alu	0.181818
3	130872799	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.166667
3	130872857	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.222222
3	130970535	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.25
3	130970538	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.153846
3	131005169	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.176471
3	131005196	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.157895
3	131005320	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.117647
3	131005346	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.111111
3	131006877	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.117647
3	131006888	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.294118
3	131006889	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.166667
3	131006890	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.117647
3	131008160	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.166667
3	131008254	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.153846
3	131008347	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.166667
3	131010441	A->G	+	ENSG00000017260	ATP2C1	protein_coding	Intergenic	.	.	Alu	0.166667
3	132673933	A->G	+	ENSG00000081307	UBA5	protein_coding	Intergenic	.	.	Alu	0.166667
3	133579632	A->G	+	ENSG00000091527	CDV3	protein_coding	Intergenic	.	.	Alu	0.2
3	133579686	A->G	+	ENSG00000091527	CDV3	protein_coding	Intergenic	.	.	Alu	0.153846
3	133579732	A->G	+	ENSG00000091527	CDV3	protein_coding	Intergenic	.	.	Alu	0.2
3	133650997	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.25
3	133651014	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.176471
3	133651021	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.352941
3	133651045	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.142857
3	133652014	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	133652020	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.208333
3	133652061	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.0526316
3	133652124	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.190476
3	133655027	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.08
3	133655084	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	133657479	A->G	-	ENSG00000163781	TOPBP1	protein_coding	Intergenic	.	.	Alu	0.181818
3	136171969	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.3
3	136172061	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.2
3	136175503	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.181818
3	136191641	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.166667
3	136191657	A->G	-	ENSG00000174579	MSL2	protein_coding	Intergenic	.	.	Alu	0.3
3	136331789	A->G	+	ENSG00000114054	PCCB	protein_coding	Intergenic	.	.	Alu	0.166667
3	136491269	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.25
3	136667945	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.181818
3	136669515	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.181818
3	136670718	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.181818
3	136670753	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.333333
3	136690358	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
3	136690365	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.272727
3	136690479	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.363636
3	136693728	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
3	136712049	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.125
3	136713552	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.272727
3	136714152	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.111111
3	136715431	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.272727
3	136716265	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.142857
3	136720081	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.105263
3	136726703	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136727907	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.111111
3	136727932	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.173913
3	136727941	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.136364
3	136728156	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.3
3	136729279	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	136732783	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.117647
3	136734060	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.6
3	136734061	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136735415	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	136737504	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.125
3	136737510	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.25
3	136737511	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.1875
3	136738383	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
3	136738429	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.142857
3	136738568	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.142857
3	136740168	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.235294
3	136740169	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.294118
3	136740535	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.142857
3	136740618	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.363636
3	136740631	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136740680	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.1
3	136741694	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.25
3	136742516	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.125
3	136742525	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136742593	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.08
3	136744093	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
3	136744126	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.1875
3	136744178	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.117647
3	136744280	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.125
3	136744288	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.1
3	136744949	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.125
3	136747445	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
3	136747506	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.4
3	136747614	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.307692
3	136747915	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.166667
3	136747954	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.4
3	136748234	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136748245	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.6
3	136748253	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.636364
3	136748547	A->G	-	ENSG00000118007	STAG1	protein_coding	Intergenic	.	.	Alu	0.2
3	136871193	A->G	+	ENSG00000158092	NCK1	protein_coding	Intergenic	.	.	Alu	0.2
3	136880698	A->G	+	ENSG00000158092	NCK1	protein_coding	Intergenic	.	.	Alu	0.416667
3	136880738	A->G	+	ENSG00000158092	NCK1	protein_coding	Intergenic	.	.	Alu	0.538462
3	136880774	A->G	+	ENSG00000158092	NCK1	protein_coding	Intergenic	.	.	Alu	0.4
3	138192809	A->G	+	ENSG00000114098	ARMC8	protein_coding	Intergenic	.	.	Alu	0.0909091
3	138196591	A->G	+	ENSG00000114098	ARMC8	protein_coding	Intergenic	.	.	Alu	0.142857
3	138196595	A->G	+	ENSG00000114098	ARMC8	protein_coding	Intergenic	.	.	Alu	0.142857
3	138255900	A->G	+	ENSG00000114098	ARMC8	protein_coding	Intergenic	.	.	Alu	0.2
3	138255971	A->G	+	ENSG00000114098	ARMC8	protein_coding	Intergenic	.	.	Alu	0.1
3	138255976	A->G	+	ENSG00000114098	ARMC8	protein_coding	Intergenic	.	.	Alu	0.111111
3	138256540	A->G	+	ENSG00000114098	ARMC8	protein_coding	Intergenic	.	.	Alu	0.166667
3	141489925	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.176471
3	141489926	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.235294
3	141741852	A->G	+	ENSG00000114125	RNF7	protein_coding	Intergenic	.	.	Alu	0.266667
3	141748002	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	141748475	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	141749088	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	141749190	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	142018612	A->G	-	ENSG00000114126	TFDP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	142313883	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.117647
3	142315073	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.272727
3	142315214	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.2
3	142331995	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.166667
3	142332009	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.538462
3	142416781	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.4
3	142419652	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.166667
3	143017833	A->G	+	ENSG00000163714	U2SURP	protein_coding	Intergenic	.	.	Alu	0.190476
3	143044401	A->G	+	ENSG00000163714	U2SURP	protein_coding	Intergenic	.	.	Alu	0.181818
3	146543116	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.269231
3	150433860	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.266667
3	150433922	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.133333
3	150433923	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.142857
3	150433939	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.285714
3	150434032	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.2
3	150434351	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.133333
3	150606758	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.166667
3	150606773	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.166667
3	150616846	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.533333
3	150617343	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.4
3	150617346	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.142857
3	150617401	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.2
3	150617414	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.157895
3	150617419	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.210526
3	150617430	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.142857
3	150617477	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.153846
3	150618639	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.111111
3	150618679	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.2
3	150618707	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.153846
3	150755922	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.166667
3	150755923	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.181818
3	152285752	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.142857
3	152285788	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.111111
3	152285886	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	152307021	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0246914
3	152307054	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0210526
3	152307119	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.03125
3	152313152	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.117647
3	152330215	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0540541
3	152330240	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.259259
3	152331790	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0454545
3	152331791	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0425532
3	152331808	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0555556
3	152331816	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.0645161
3	152378249	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.5
3	152378770	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.181818
3	152378773	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.416667
3	155841163	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.2
3	155849716	A->G	-	ENSG00000284952	AC104472.3	protein_coding	Intergenic	.	.	Alu	0.125
3	155888785	A->G	+	ENSG00000163655	GMPS	protein_coding	Intergenic	.	.	Alu	0.2
3	160521543	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	160521546	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.181818
3	160521551	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.272727
3	160544104	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.3
3	169971210	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0833333
3	169971213	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.111111
3	169971238	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0666667
3	169971280	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0769231
3	169971284	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0666667
3	169971295	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.129032
3	169971346	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0606061
3	169972662	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.296296
3	169972663	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.148148
3	169972680	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0769231
3	169973442	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.0967742
3	169973565	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.136364
3	169986826	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.166667
3	169986867	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.153846
3	169987185	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.181818
3	169987218	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.3
3	169987227	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.2
3	169989223	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.2
3	169991527	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.125
3	170160847	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.142857
3	170167241	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.2
3	170167391	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.538462
3	170236771	A->G	+	ENSG00000163558	PRKCI	protein_coding	Intergenic	.	.	Alu	0.166667
3	172051183	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.111111
3	172051184	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.105263
3	172051223	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.133333
3	172052313	A->G	+	ENSG00000075420	FNDC3B	protein_coding	Intergenic	.	.	Alu	0.181818
3	177031125	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.3
3	177069682	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.357143
3	177069701	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.25
3	177070722	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.3
3	177082871	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177082894	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.157895
3	177135008	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	177151867	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	177151902	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.4
3	177153104	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.272727
3	177166004	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177167873	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.230769
3	177167924	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.3
3	177170693	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.133333
3	177170702	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177170712	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	177170743	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.125
3	177170761	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.428571
3	177171187	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.25
3	177172916	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	177172956	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.25
3	177173075	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.4
3	177173104	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177173111	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	177176953	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.105263
3	177181262	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.115385
3	177181314	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.2
3	177182371	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	177182379	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	177188337	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.3
3	177190009	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	177190444	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.25
3	177190454	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.153846
3	177190456	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.307692
3	177191841	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.111111
3	177191847	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177191859	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.166667
3	177191913	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.25
3	177192936	A->G	-	ENSG00000177565	TBL1XR1	protein_coding	Intergenic	.	.	Alu	0.4
3	179160824	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.318182
3	179162012	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.454545
3	179177547	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.357143
3	179177593	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.153846
3	179177978	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.2
3	179177984	A->G	+	ENSG00000121879	PIK3CA	protein_coding	Intergenic	.	.	Alu	0.166667
3	179326121	A->G	+	ENSG00000121864	ZNF639	protein_coding	Intergenic	.	.	Alu	0.3
3	179326149	A->G	+	ENSG00000121864	ZNF639	protein_coding	Intergenic	.	.	Alu	0.142857
3	179326254	A->G	+	ENSG00000121864	ZNF639	protein_coding	Intergenic	.	.	Alu	0.25
3	179327028	A->G	+	ENSG00000121864	ZNF639	protein_coding	Intergenic	.	.	Alu	0.545455
3	179369232	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.571429
3	179369233	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.285714
3	179371252	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.133333
3	179371275	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.125
3	179371278	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.266667
3	179371282	A->G	+	ENSG00000171109	MFN1	protein_coding	Intergenic	.	.	Alu	0.222222
3	180920685	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.1875
3	180920694	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.111111
3	180920779	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.333333
3	180921183	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	180921184	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.142857
3	180922730	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.125
3	180925299	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.133333
3	180931858	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	180949585	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.181818
3	180950944	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.315789
3	180950955	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.1875
3	180951005	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.111111
3	180951031	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.631579
3	180951143	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.307692
3	180951148	A->G	+	ENSG00000114416	FXR1	protein_coding	Intergenic	.	.	Alu	0.3
3	182830208	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.0952381
3	182833384	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.222222
3	182833419	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.125
3	182833425	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.12
3	182833564	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.0416667
3	182838683	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.3
3	182851102	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.1
3	182851106	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.0952381
3	182851107	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.1
3	182851195	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182871047	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.2
3	182871242	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.235294
3	182894316	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.307692
3	182907010	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182910307	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.181818
3	182957424	A->G	-	ENSG00000043093	DCUN1D1	protein_coding	Intergenic	.	.	Alu	0.214286
3	183637659	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0857143
3	183637661	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.111111
3	183637671	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0606061
3	183637753	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.142857
3	183640852	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.1875
3	183641278	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0909091
3	183641309	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0909091
3	183655358	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.142857
3	183655365	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.307692
3	183655425	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.133333
3	183655444	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.176471
3	183656303	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.1
3	183658943	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.3
3	183658995	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.2
3	183659360	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.2
3	183659390	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.111111
3	183659416	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.125
3	183659417	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.125
3	183666155	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.133333
3	183666293	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.166667
3	183667209	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.736842
3	183667301	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.153846
3	183667305	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.181818
3	183669995	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.0769231
3	183722672	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.125
3	183729702	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.363636
3	183729720	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.3
3	183732877	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.384615
3	183732879	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.142857
3	183732930	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.6
3	183732994	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.454545
3	183740949	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.166667
3	183740962	A->G	+	ENSG00000163872	YEATS2	protein_coding	Intergenic	.	.	Alu	0.75
3	183880932	A->G	-	ENSG00000283765	AC131160.1	protein_coding	Intergenic	.	.	Alu	0.157895
3	184318401	A->G	+	ENSG00000114867	EIF4G1	protein_coding	Intergenic	.	.	Alu	0.181818
3	185591112	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.7
3	185591166	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.1875
3	185591167	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.25
3	185591594	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185591603	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185593829	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.2
3	185596066	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.3
3	185596083	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185596238	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185596438	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.8
3	185756851	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	185756853	A->G	-	ENSG00000073792	IGF2BP2	protein_coding	Intergenic	.	.	Alu	0.272727
3	193628920	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.125
3	193628962	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.121212
3	193629014	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.0571429
3	193629018	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.114286
3	193629043	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.25
3	193629053	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.107143
3	193629055	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.137931
3	193629511	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.545455
3	193629526	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.153846
3	193629573	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.125
3	193629612	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.166667
3	193632614	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	193632636	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	194482755	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.3
3	194649418	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.1875
3	194649427	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.375
3	194649438	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.583333
3	194649439	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.25
3	194649440	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.333333
3	194649987	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.105263
3	195344012	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195413566	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.4
3	195413577	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195413875	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.125
3	195413892	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.133333
3	195413923	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.25
3	195413929	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195413975	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	195413976	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	195414297	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	195414355	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	195414381	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.375
3	195414382	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.125
3	195414384	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.125
3	195417726	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	195417801	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.25
3	195417827	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195417849	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.133333
3	195417873	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.428571
3	195417874	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195417886	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.428571
3	195418527	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.117647
3	195418600	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.25
3	195418608	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.166667
3	195422504	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	195422511	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0909091
3	195422512	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.227273
3	195422520	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.136364
3	195422552	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.333333
3	195422612	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.117647
3	195424660	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195424662	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.363636
3	195424711	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.2
3	195424750	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.5
3	195427604	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.545455
3	195427626	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.285714
3	195428405	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195428518	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.3
3	195428585	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.714286
3	195428615	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.642857
3	195428617	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.714286
3	195431719	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0625
3	195437171	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.125
3	195437328	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.190476
3	195438654	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.1
3	195438978	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195439660	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0869565
3	195439778	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.133333
3	195439791	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.0714286
3	195439809	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.111111
3	195439823	A->G	-	ENSG00000114331	ACAP2	protein_coding	Intergenic	.	.	Alu	0.111111
3	195520094	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195520102	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.5
3	195520107	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.210526
3	195520108	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.1
3	195520174	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.2
3	195520468	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195520490	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.15
3	195520500	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.15
3	195520530	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.285714
3	195520535	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.478261
3	195520536	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.190476
3	195520598	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.111111
3	195520792	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.291667
3	195520887	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.15
3	195520948	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.181818
3	195666989	A->G	+	ENSG00000215837	SDHAP2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.545455
3	195903460	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.153846
3	196057709	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.125
3	196057734	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.1
3	196069075	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.1875
3	196069082	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.235294
3	196070429	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.153846
3	196070503	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.2
3	196070504	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.4
3	196070687	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0952381
3	196070695	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.392857
3	196070931	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.470588
3	196077349	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.117647
3	196077401	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.2
3	196079577	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.125
3	196241385	A->G	-	ENSG00000163959	SLC51A	protein_coding	Intergenic	.	.	Alu	0.25
3	196241389	A->G	-	ENSG00000163959	SLC51A	protein_coding	Intergenic	.	.	Alu	0.214286
3	196241431	A->G	-	ENSG00000163959	SLC51A	protein_coding	Intergenic	.	.	Alu	0.105263
3	196241465	A->G	-	ENSG00000163959	SLC51A	protein_coding	Intergenic	.	.	Alu	0.833333
3	196363492	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.153846
3	196366257	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.111111
3	196366329	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.0952381
3	196366400	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.125
3	196430292	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.3
3	196430662	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intergenic	.	.	Alu	0.142857
3	196485475	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.272727
3	196486533	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.3
3	196486534	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.2
3	196658790	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.153846
3	196742193	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.384615
3	196742206	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.142857
3	196742351	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.142857
3	196901912	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.25
3	196905965	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.304348
3	196905970	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.380952
3	196906068	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.125
3	196916277	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.142857
3	196916632	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
3	196916901	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.117647
3	196916956	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	196916987	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.166667
3	196917037	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.263158
3	196917066	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
3	196917083	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.192308
3	196922761	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0833333
3	196922769	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0740741
3	196922812	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.157895
3	197751463	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.153846
3	197751951	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.181818
3	197751952	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.166667
3	197752110	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.190476
4	101309005	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.153846
4	101309010	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.2
4	101309011	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.2
4	101309051	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.25
4	101323891	A->G	-	ENSG00000138814	PPP3CA	protein_coding	Intergenic	.	.	Alu	0.153846
4	102511403	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0576923
4	102511420	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0555556
4	102511425	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.037037
4	102511493	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0588235
4	102511582	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.16
4	102511596	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0666667
4	102511659	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0571429
4	102512400	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0714286
4	102512448	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.05
4	102512453	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.146341
4	102512461	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0645161
4	102512466	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0740741
4	102559890	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	102570556	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.2
4	102572231	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.136364
4	102791771	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
4	102813324	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.212121
4	102813325	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.258065
4	102813331	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.111111
4	102813341	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intergenic	.	.	Alu	0.181818
4	103062713	A->G	-	ENSG00000164038	SLC9B2	protein_coding	Intergenic	.	.	Alu	0.230769
4	103062735	A->G	-	ENSG00000164038	SLC9B2	protein_coding	Intergenic	.	.	Alu	0.2
4	103062775	A->G	-	ENSG00000164038	SLC9B2	protein_coding	Intergenic	.	.	Alu	0.1875
4	103062811	A->G	-	ENSG00000164038	SLC9B2	protein_coding	Intergenic	.	.	Alu	0.384615
4	105165180	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.181818
4	105186045	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.153846
4	108623510	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.125
4	108623537	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.230769
4	108623539	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.307692
4	108623616	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.153846
4	108626166	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.166667
4	108626221	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.181818
4	109445846	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.0952381
4	109477382	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.181818
4	109482670	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.166667
4	109482842	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.181818
4	109501571	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.153846
4	109529969	A->G	+	ENSG00000138802	SEC24B	protein_coding	Intergenic	.	.	Alu	0.2
4	109566452	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.2
4	112154371	A->G	+	ENSG00000174749	FAM241A	protein_coding	Intergenic	.	.	Alu	0.2
4	112640645	A->G	+	ENSG00000174720	LARP7	protein_coding	Intergenic	.	.	Alu	0.181818
4	118694935	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.181818
4	118695434	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.2
4	118695477	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.333333
4	118695481	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.5
4	118701317	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.176471
4	118701395	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.2
4	118701433	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.125
4	118701454	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.142857
4	118702526	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.3
4	119502186	A->G	+	ENSG00000245958	AC093752.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
4	119502214	A->G	+	ENSG00000245958	AC093752.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
4	119502216	A->G	+	ENSG00000245958	AC093752.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
4	127969460	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.2
4	128851056	A->G	+	ENSG00000077684	JADE1	protein_coding	Intergenic	.	.	Alu	0.666667
4	128851060	A->G	+	ENSG00000077684	JADE1	protein_coding	Intergenic	.	.	Alu	0.461538
4	139046129	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0882353
4	139047433	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.181818
4	139074492	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139074508	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	139079037	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139079049	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.26087
4	139079129	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.277778
4	139079180	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	139079181	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.1875
4	139079194	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139079695	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.380952
4	139079803	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.3
4	139079836	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.105263
4	139152549	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139153359	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.15
4	139153376	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.190476
4	139153383	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139153388	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139169745	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139169805	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139171143	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139171679	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0952381
4	139171703	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.1
4	139171707	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.15
4	139171743	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.285714
4	139365591	A->G	+	ENSG00000164134	NAA15	protein_coding	Intergenic	.	.	Alu	0.153846
4	143541897	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.166667
4	143541962	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.105263
4	145053981	A->G	-	ENSG00000164162	ANAPC10	protein_coding	Intergenic	.	.	Alu	0.363636
4	147663477	A->G	-	ENSG00000164168	TMEM184C	protein_coding	Intergenic	.	.	Alu	0.272727
4	150753985	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.181818
4	150776201	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.153846
4	150832379	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.666667
4	150832384	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.181818
4	150832393	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.7
4	150832447	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150832472	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.454545
4	150832474	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.5
4	150832975	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.272727
4	150833002	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.4
4	150833008	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.2
4	150833062	A->G	-	ENSG00000198589	LRBA	protein_coding	Intergenic	.	.	Alu	0.4
4	151105283	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.1875
4	151105296	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151105344	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.105263
4	151105351	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.294118
4	151105468	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.105263
4	151105720	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.275862
4	151105767	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0606061
4	151105904	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151105955	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.117647
4	151106094	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.210526
4	151106095	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.2
4	151106488	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
4	151107235	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151108253	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151108289	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.133333
4	151108377	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151109300	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.105263
4	151109301	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.1
4	151109490	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.3125
4	151109495	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.3125
4	151109519	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.181818
4	151110339	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.142857
4	151110393	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
4	151113391	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.133333
4	151117699	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.08
4	151117700	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.0769231
4	151118147	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151128672	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.181818
4	151129470	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.153846
4	151130232	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.230769
4	151130325	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.1875
4	151130333	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.230769
4	151130356	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.3
4	151141195	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151141218	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.272727
4	152496065	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.142857
4	152508064	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.2
4	152518425	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.166667
4	152518470	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.142857
4	152518471	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.214286
4	152518474	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.285714
4	152518570	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.133333
4	152518572	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.266667
4	152519117	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.181818
4	152519186	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.25
4	152519198	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.272727
4	152519292	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.133333
4	152529993	A->G	-	ENSG00000109670	FBXW7	protein_coding	Intergenic	.	.	Alu	0.0606061
4	153483577	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.272727
4	153483579	A->G	+	ENSG00000121210	TMEM131L	protein_coding	Intergenic	.	.	Alu	0.363636
4	153699924	A->G	+	ENSG00000137462	TLR2	protein_coding	Intergenic	.	.	Alu	0.416667
4	155733580	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
4	155733600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
4	155733603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.352941
4	173180508	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.133333
4	173198140	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.166667
4	173209947	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.142857
4	173210473	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.166667
4	173210474	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.333333
4	173210477	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.333333
4	173215876	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.181818
4	173215884	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.533333
4	173215899	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.5
4	173215923	A->G	+	ENSG00000109586	GALNT7	protein_coding	Intergenic	.	.	Alu	0.2
4	176325774	A->G	+	ENSG00000129128	SPCS3	protein_coding	Intergenic	.	.	Alu	0.266667
4	183661904	A->G	+	ENSG00000168538	TRAPPC11	protein_coding	Intergenic	.	.	Alu	0.5
4	183661948	A->G	+	ENSG00000168538	TRAPPC11	protein_coding	Intergenic	.	.	Alu	0.153846
4	184822487	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.176471
4	184822733	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.148148
4	184822864	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.214286
4	184822867	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.333333
4	184822894	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.5
4	184822932	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.214286
4	184823819	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.130435
4	184823826	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.130435
4	184824270	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0714286
4	184824286	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0666667
4	184824309	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.115385
5	109798701	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.105263
5	109798710	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	109798899	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.352941
5	109798944	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.2
5	109798952	A->G	+	ENSG00000112893	MAN2A1	protein_coding	Intergenic	.	.	Alu	0.130435
5	111509786	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.384615
5	111509825	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.272727
5	111511463	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.1875
5	111511490	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.294118
5	112986436	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	113000330	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	113002541	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	113002575	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.333333
5	113002620	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.153846
5	113002657	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.153846
5	113002685	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	113002686	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.15
5	113003208	A->G	+	ENSG00000172795	DCP2	protein_coding	Intergenic	.	.	Alu	0.7
5	122804024	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.153846
5	122804067	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.25
5	122805144	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	122805240	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122805386	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122805387	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.272727
5	122807030	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.545455
5	122807031	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.538462
5	122807071	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.133333
5	122807102	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.1
5	122807104	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.315789
5	126828948	A->G	+	ENSG00000113368	LMNB1	protein_coding	Intergenic	.	.	Alu	0.272727
5	131159919	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0444444
5	131159954	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.122449
5	131160047	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0408163
5	131160057	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0434783
5	131160067	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.037037
5	131160120	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.12766
5	131160142	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.228571
5	131160144	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.131579
5	131161359	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	131161407	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.205128
5	131161438	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131161447	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0882353
5	131161532	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0882353
5	131161551	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.0540541
5	131161556	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.117647
5	131268686	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.08
5	131269981	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0689655
5	131270018	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0769231
5	131273847	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.272727
5	131273890	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.272727
5	131276178	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131276191	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.263158
5	131278115	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.115385
5	131278146	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.136364
5	131278198	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131284604	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131284657	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.235294
5	131284683	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131284725	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0909091
5	131284747	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.08
5	131284899	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.130435
5	131284905	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.0833333
5	131285213	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1
5	131287604	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.263158
5	131287657	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.294118
5	131287702	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.111111
5	131287982	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131288037	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131288057	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.25
5	131288058	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.25
5	131288060	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131288062	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.461538
5	131288143	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131288144	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.15
5	131288163	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.25
5	131288179	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.214286
5	131289409	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.454545
5	131289558	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.727273
5	131289827	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.333333
5	131289857	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131289893	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.647059
5	131289910	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1
5	131289943	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.285714
5	131289972	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.409091
5	131289976	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.714286
5	131290017	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.1
5	131292814	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.117647
5	131319031	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.5
5	131319043	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131319141	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131319148	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.111111
5	131320189	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.125
5	131321395	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.142857
5	131353376	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3
5	131353715	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3125
5	131353762	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.266667
5	131353900	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131353901	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131360250	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131362892	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.153846
5	131362913	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.117647
5	131362998	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	131397938	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.166667
5	131476351	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.5
5	131513797	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.166667
5	131529738	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.214286
5	131530046	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.2
5	131530072	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.363636
5	131530084	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.2
5	131546482	A->G	-	ENSG00000158987	RAPGEF6	protein_coding	Intergenic	.	.	Alu	0.181818
5	131682489	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.2
5	131682589	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.272727
5	131685145	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.333333
5	131686437	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131686471	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.2
5	131686837	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.153846
5	131687266	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.214286
5	131687324	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.181818
5	131687325	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.272727
5	131687352	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.1875
5	131687370	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.227273
5	131687378	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	131687392	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.684211
5	131687395	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.210526
5	131687397	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.157895
5	131687401	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.15
5	131695021	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.153846
5	131697397	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.384615
5	131697398	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.230769
5	131697774	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.4
5	131743595	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.545455
5	131753059	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.6
5	131763442	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.4
5	131763471	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.6
5	131763632	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.25
5	131764197	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.5
5	131764449	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.4
5	131766314	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.176471
5	131777014	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.533333
5	131777015	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.142857
5	131777060	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.235294
5	131777066	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131777069	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.166667
5	131790330	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.117647
5	131794715	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.142857
5	132900552	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0909091
5	132902113	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
5	132902150	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.272727
5	132912245	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.545455
5	132912423	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.333333
5	132912433	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.583333
5	132912458	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	132912650	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.266667
5	132913621	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.176471
5	132913622	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132913701	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.263158
5	132913708	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0909091
5	132914010	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132914024	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.1
5	132914080	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.0625
5	132914090	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.103448
5	132914120	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.115385
5	132915787	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.375
5	132915840	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.7
5	132916007	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132916094	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
5	132916114	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.25
5	132916126	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.235294
5	132916129	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132918482	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132918647	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.210526
5	132918648	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.157895
5	132919150	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132919158	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132919587	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
5	132919590	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.105263
5	132919631	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.444444
5	132919632	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.157895
5	132919684	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.117647
5	132919725	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.105263
5	132922307	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132922387	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132939134	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132942835	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132942926	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.166667
5	132951053	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132952728	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132952854	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132952867	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132953493	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132960960	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.214286
5	132961113	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.2
5	132961273	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.75
5	132961278	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.714286
5	132961282	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.142857
5	132961420	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.105263
5	132961444	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.111111
5	133100633	A->G	+	ENSG00000170606	HSPA4	protein_coding	Intergenic	.	.	Alu	0.2
5	133100638	A->G	+	ENSG00000170606	HSPA4	protein_coding	Intergenic	.	.	Alu	0.3
5	134121405	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.117647
5	134121437	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.214286
5	134121453	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.230769
5	134121510	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.166667
5	134135015	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.285714
5	134135017	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.214286
5	134135018	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.285714
5	134137376	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.153846
5	134162198	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	134162199	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.210526
5	134162216	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.125
5	134162239	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	134162268	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	134162269	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	134162274	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	134162308	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.111111
5	134162816	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.12
5	134162819	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.241379
5	134162881	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.1
5	134162958	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	134162964	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.73913
5	134162970	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.157895
5	134162998	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.111111
5	134163027	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.176471
5	134163665	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.28125
5	134163666	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.121212
5	134163668	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	134163678	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.103448
5	134163708	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.12
5	134170279	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0454545
5	134172750	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	134207318	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.230769
5	134207322	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.4
5	134207328	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.5
5	134209995	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.142857
5	134211207	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.181818
5	134215647	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.166667
5	134215690	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.181818
5	134215718	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.153846
5	134215734	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.125
5	134220276	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.142857
5	134220287	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.266667
5	134221807	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.181818
5	134377925	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.16129
5	134377932	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134377981	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.16129
5	134378040	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.25
5	134378054	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.217391
5	134378062	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0952381
5	134378090	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.529412
5	134378104	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.125
5	134378334	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.5
5	134378339	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.4
5	134378360	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.125
5	134378401	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.214286
5	134378405	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134379964	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134379980	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.115385
5	134379996	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134381096	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.384615
5	134381106	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.416667
5	134381280	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.105263
5	134381356	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0606061
5	134381359	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	134381381	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0666667
5	134381480	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0909091
5	134381500	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.305556
5	134381686	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.157895
5	134381758	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134381864	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.214286
5	134381865	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.107143
5	134381899	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.133333
5	134382044	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.2
5	134382053	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.105263
5	134382572	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.142857
5	134382575	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0869565
5	134382583	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0833333
5	134382612	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0666667
5	134382614	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.1
5	134382723	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0740741
5	134382761	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0666667
5	134382911	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134382912	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134383363	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.166667
5	134383583	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.133333
5	134383633	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.3125
5	134383695	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.142857
5	134383734	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.136364
5	134388023	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0833333
5	134388038	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.151515
5	134392995	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
5	134393341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
5	134393346	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	134393527	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	134397085	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
5	134672794	A->G	+	ENSG00000113615	SEC24A	protein_coding	Intergenic	.	.	Alu	0.2
5	134742974	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.153846
5	134743121	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.125
5	134772313	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.25
5	134772442	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.166667
5	134772989	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.272727
5	134773074	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.25
5	134774874	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.214286
5	134775769	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.181818
5	134778252	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.2
5	134778253	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.272727
5	134847881	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.2
5	134894965	A->G	+	ENSG00000113621	TXNDC15	protein_coding	Intergenic	.	.	Alu	0.2
5	137980091	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	137980097	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.5
5	137986840	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.428571
5	137986860	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.4
5	137996668	A->G	-	ENSG00000031003	FAM13B	protein_coding	Intergenic	.	.	Alu	0.2
5	138362266	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.111111
5	138513343	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.142857
5	138513389	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	138514351	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.111111
5	138565790	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.227273
5	138570137	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.166667
5	138570138	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.117647
5	138570144	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.785714
5	138570146	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.153846
5	138570218	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.2
5	138570282	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.08
5	138573060	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.2
5	138573075	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.111111
5	138573157	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.111111
5	138573211	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.111111
5	138573302	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.105263
5	138573317	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.133333
5	138573404	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.230769
5	138573417	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.263158
5	138573478	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.2
5	138573484	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.235294
5	138573503	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.117647
5	138573564	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.4
5	138573565	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.2
5	139277096	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.9
5	139277264	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.538462
5	139277265	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.461538
5	139277279	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.166667
5	139277952	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.529412
5	139277968	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.6
5	139277974	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.307692
5	139295903	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.103448
5	139295910	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.130435
5	139295927	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.347826
5	139297020	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0909091
5	139297022	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.137931
5	139297025	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0833333
5	139297093	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.111111
5	139300222	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139302201	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.409091
5	139302202	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.26087
5	139303176	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.15
5	139303188	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.111111
5	139303202	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.157895
5	139303268	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.2
5	139303342	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.25
5	139303523	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.181818
5	139303592	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.8
5	139303651	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.181818
5	139303663	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.214286
5	139321227	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139321625	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.105263
5	139321627	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.210526
5	139323644	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.217391
5	139323678	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.166667
5	139323683	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.153846
5	139323773	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.333333
5	139323823	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.185185
5	139323826	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.172414
5	139323836	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.153846
5	139323840	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.133333
5	139323841	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.0666667
5	139328858	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.176471
5	139332043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
5	139345221	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.2
5	139345246	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.4
5	139347077	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.3
5	139347476	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139563012	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.103448
5	139564215	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.125
5	139564223	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.333333
5	139564283	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.125
5	139564293	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.125
5	139564655	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139566096	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.5
5	139566253	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139566464	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.5
5	139566467	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139566512	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.25
5	139566528	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139566621	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139566631	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.148148
5	139566638	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.114286
5	139567769	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.142857
5	139570022	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.0869565
5	139570023	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.130435
5	139570120	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.238095
5	139570210	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.5
5	139570228	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.1
5	139570466	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.25
5	139570467	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.166667
5	139570480	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.25
5	139575828	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.272727
5	139575832	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.272727
5	139575839	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.25
5	139580586	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139580631	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139580653	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.272727
5	139583227	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.125
5	139583664	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139583668	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.3
5	139588033	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.125
5	139588064	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.529412
5	139588081	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.133333
5	139588139	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.4
5	139588790	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.166667
5	139591093	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.454545
5	139592055	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139602638	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	140451674	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	140451675	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.6
5	140686792	A->G	-	ENSG00000170445	HARS	protein_coding	Intergenic	.	.	Alu	0.181818
5	140686805	A->G	-	ENSG00000170445	HARS	protein_coding	Intergenic	.	.	Alu	0.2
5	141531644	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.272727
5	141593850	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.166667
5	141593896	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.125
5	141593948	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.235294
5	141593964	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.105263
5	141594023	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.117647
5	141594524	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.2
5	141594525	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.2
5	141608204	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.166667
5	141610038	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.285714
5	141610041	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.461538
5	141610087	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.2
5	141610129	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.142857
5	141610224	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.4
5	141610269	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.363636
5	141610270	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.181818
5	141611077	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.153846
5	141611437	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.157895
5	141611515	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.3
5	141611522	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.272727
5	141611967	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.2
5	141612031	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.214286
5	141612041	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.133333
5	142127085	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	142127155	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.2
5	142131173	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	142136635	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.125
5	142136864	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	142136871	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	142136889	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	142137174	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	142137179	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.357143
5	142137235	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.647059
5	142137260	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	142137273	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.5
5	142137290	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.6
5	142137297	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.157895
5	142137405	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.291667
5	142137430	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.208333
5	142137444	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	142137451	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.407407
5	142137457	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	142137459	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	142141438	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	142141450	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.5
5	142141876	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.4
5	142141881	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	142141948	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.08
5	142141955	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	142141994	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.125
5	142141995	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.115385
5	142142016	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.259259
5	142142062	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	142142863	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	143344594	A->G	-	ENSG00000113580	NR3C1	protein_coding	Intergenic	.	.	Alu	0.153846
5	145757717	A->G	-	ENSG00000186314	PRELID2	protein_coding	Intergenic	.	.	Alu	0.466667
5	146235538	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.153846
5	146242025	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.2
5	146246556	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.153846
5	146249022	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.2
5	146249218	A->G	+	ENSG00000275740	AC091959.3	protein_coding	Intergenic	.	.	Alu	0.3
5	146485773	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.0625
5	146485794	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	146485795	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.107143
5	146485812	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.208333
5	146485860	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.125
5	146495899	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.2
5	146495900	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.25
5	146497060	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.230769
5	146497300	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.117647
5	148387951	A->G	+	ENSG00000145868	FBXO38	protein_coding	Intergenic	.	.	Alu	0.3
5	148387952	A->G	+	ENSG00000145868	FBXO38	protein_coding	Intergenic	.	.	Alu	0.4
5	148387964	A->G	+	ENSG00000145868	FBXO38	protein_coding	Intergenic	.	.	Alu	0.2
5	149531665	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.117647
5	149532530	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.3
5	149540898	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.2
5	149541426	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149543830	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.12
5	149543900	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.173913
5	149546166	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.1
5	149546169	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	149546390	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0967742
5	149547944	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.254902
5	149547947	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.037037
5	149547967	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.148148
5	149547985	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.206897
5	149548009	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0625
5	149548027	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	149548090	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.222222
5	149548095	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.15
5	149548098	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149548138	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.323529
5	149548144	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	149548166	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.133333
5	149548322	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.109091
5	149548323	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0701754
5	149548332	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.101695
5	149548341	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	149548350	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0461538
5	149548401	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.258621
5	149548467	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.04
5	149548480	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0377358
5	149548484	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	149548491	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.255814
5	149548564	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.08
5	149548617	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.117647
5	149548727	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.238095
5	149548749	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.173913
5	149548766	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.272727
5	149548792	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.222222
5	149548853	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.225806
5	150047162	A->G	+	ENSG00000113716	HMGXB3	protein_coding	Intergenic	.	.	Alu	0.272727
5	150741097	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.272727
5	150741573	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.25
5	150741676	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.181818
5	150754868	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.15
5	150754931	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.105263
5	151043512	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.136364
5	151043590	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.3125
5	151043592	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.25
5	151043651	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	151043653	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	151043656	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.2
5	151043663	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.28
5	151057551	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.272727
5	151057560	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.153846
5	151057568	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.333333
5	151073005	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.25
5	151073098	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.2
5	151074850	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.105263
5	151074861	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.1875
5	151074916	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	151074942	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.136364
5	151077116	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.409091
5	151097845	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
5	151204059	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.75
5	151204060	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.833333
5	151778656	A->G	+	ENSG00000145907	G3BP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	154861883	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.352941
5	154861885	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.235294
5	154861905	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.52381
5	154862284	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.315789
5	154862285	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.333333
5	154863504	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.52
5	154863509	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.0833333
5	154866201	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.08
5	154866266	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.75
5	154866287	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.583333
5	154866288	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.166667
5	154866301	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.764706
5	154866649	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.454545
5	154866655	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.363636
5	154866792	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.111111
5	154866798	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.25
5	154866895	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.2
5	154870177	A->G	+	ENSG00000155508	CNOT8	protein_coding	Intergenic	.	.	Alu	0.0909091
5	157185332	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.294118
5	157185365	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.111111
5	157185368	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.111111
5	157185378	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.125
5	157185445	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.5
5	157185660	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.2
5	157185662	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.615385
5	157189560	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.0952381
5	157189625	A->G	+	ENSG00000113263	ITK	protein_coding	Intergenic	.	.	Alu	0.125
5	157801734	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.0857143
5	157841761	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	157843387	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.3
5	157843423	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.333333
5	157843429	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.272727
5	157849070	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.4
5	157849071	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.2
5	157851070	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.181818
5	157851071	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.181818
5	157851544	A->G	-	ENSG00000113282	CLINT1	protein_coding	Intergenic	.	.	Alu	0.166667
5	159186936	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.307692
5	159187109	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.2
5	159187147	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.5
5	159190174	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.166667
5	159190180	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.3
5	159190190	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.636364
5	159190237	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.214286
5	159190260	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.545455
5	159190266	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.307692
5	159190306	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.2
5	159190307	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.2
5	159190468	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.454545
5	159190469	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.166667
5	159190521	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.214286
5	159190579	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.733333
5	160015322	A->G	+	ENSG00000113312	TTC1	protein_coding	Intergenic	.	.	Alu	0.181818
5	160110865	A->G	-	ENSG00000170234	PWWP2A	protein_coding	Intergenic	.	.	Alu	0.2
5	168495875	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.3125
5	168495887	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.117647
5	168495967	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.181818
5	168496103	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.142857
5	168496126	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.416667
5	168496127	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.166667
5	168496612	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.3
5	168496622	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.4
5	168496658	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.222222
5	168496684	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.125
5	168496712	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.263158
5	168496713	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.1
5	168496736	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.666667
5	168496746	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.692308
5	169658359	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.181818
5	169658787	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.285714
5	169658789	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.125
5	169659113	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.125
5	169708428	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.115385
5	169708590	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.3
5	169708665	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.153846
5	169708769	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.230769
5	169708785	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.333333
5	169708799	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.210526
5	169708812	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.1
5	169708830	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.227273
5	169708861	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.25
5	169709423	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.619048
5	169709429	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.368421
5	169709451	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.0869565
5	169709486	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.0869565
5	169709515	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.541667
5	169709523	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.0909091
5	169709598	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.142857
5	169709642	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.411765
5	169709696	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.388889
5	169709709	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.105263
5	169748695	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.3
5	169855896	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.272727
5	169855904	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.272727
5	169858963	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.2
5	170264675	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.190476
5	170264677	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.210526
5	170264777	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.166667
5	170264785	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.294118
5	170280782	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.2
5	171395393	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.222222
5	171395439	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.153846
5	171395483	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.307692
5	171395510	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.214286
5	171398595	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.153846
5	171398615	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.181818
5	171398618	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.181818
5	171398637	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.9
5	171398650	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.545455
5	171398737	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.214286
5	171398980	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.3
5	171398990	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.272727
5	171398992	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.272727
5	171399054	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.2
5	171399379	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.125
5	171401611	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.3
5	171409393	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.181818
5	171409396	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.166667
5	171409458	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.166667
5	171982467	A->G	-	ENSG00000072803	FBXW11	protein_coding	Intergenic	.	.	Alu	0.166667
5	172061722	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.181818
5	172108350	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.117647
5	172108368	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.285714
5	172108381	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.611111
5	172108398	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.157895
5	172108405	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.157895
5	172108418	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.230769
5	172109448	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.272727
5	172109558	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.272727
5	172116111	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.357143
5	172116141	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.3
5	172182889	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.166667
5	172185379	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.25
5	172186150	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.166667
5	172186179	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.214286
5	172186191	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.133333
5	172186262	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.133333
5	172186367	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.117647
5	172186506	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.277778
5	172186539	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.25
5	172186540	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.166667
5	173067075	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.285714
5	173067078	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.307692
5	173081888	A->G	+	ENSG00000164463	CREBRF	protein_coding	Intergenic	.	.	Alu	0.266667
5	173894011	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.166667
5	173894016	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.25
5	173894056	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.2
5	173894057	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.2
5	173894094	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.181818
5	176403899	A->G	-	ENSG00000175416	CLTB	protein_coding	Intergenic	.	.	Alu	0.181818
5	176453794	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.230769
5	176453805	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.230769
5	176485823	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.230769
5	176485839	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.363636
5	176489552	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.111111
5	176489586	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	176489638	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.157895
5	176489650	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.117647
5	176489680	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.125
5	176489693	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.1875
5	176489703	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.142857
5	176942986	A->G	-	ENSG00000087206	UIMC1	protein_coding	Intergenic	.	.	Alu	0.272727
5	177139699	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.416667
5	177139700	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.333333
5	177139820	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.2
5	177140563	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.117647
5	177140573	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	177144051	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.2
5	177145358	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.2
5	177145391	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.5
5	177145473	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.157895
5	177147199	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.7
5	177147206	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.3
5	177147317	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	177147342	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.2
5	177147852	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.181818
5	177151755	A->G	+	ENSG00000165671	NSD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	178117514	A->G	+	ENSG00000145911	N4BP3	protein_coding	Intergenic	.	.	Alu	0.230769
5	178616155	A->G	-	ENSG00000113240	CLK4	protein_coding	Intergenic	.	.	Alu	0.4
5	178616274	A->G	-	ENSG00000113240	CLK4	protein_coding	Intergenic	.	.	Alu	0.142857
5	178616276	A->G	-	ENSG00000113240	CLK4	protein_coding	Intergenic	.	.	Alu	0.285714
5	178616277	A->G	-	ENSG00000113240	CLK4	protein_coding	Intergenic	.	.	Alu	0.307692
5	178616684	A->G	-	ENSG00000113240	CLK4	protein_coding	Intergenic	.	.	Alu	0.125
5	179736370	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.1875
5	179750630	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.2
5	179751460	A->G	+	ENSG00000161021	MAML1	protein_coding	Intergenic	.	.	Alu	0.333333
5	179826675	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.15
5	179826718	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.15
5	179826742	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.16
5	179826762	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.192308
5	179826766	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	179827536	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0689655
5	179830964	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	179831646	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.142857
5	179832045	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.142857
5	180008622	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	180010498	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.153846
5	180010515	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.363636
5	180010563	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.181818
5	180010564	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.181818
5	180010639	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.166667
5	180010655	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	180033071	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.1
5	180033199	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.333333
5	180033489	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.111111
5	180033590	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.173913
5	180033639	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
5	181240733	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.137931
5	181240884	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.166667
6	106198770	A->G	-	ENSG00000057663	ATG5	protein_coding	Intergenic	.	.	Alu	0.133333
6	106523874	A->G	+	ENSG00000112297	CRYBG1	protein_coding	Intergenic	.	.	Alu	0.142857
6	107886550	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.166667
6	107918666	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.181818
6	107921524	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.357143
6	107921549	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.285714
6	107921590	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.583333
6	107921615	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.166667
6	107921651	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.230769
6	107921655	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.214286
6	107921719	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	107921724	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	107947486	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.214286
6	107949445	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.5
6	107955237	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.181818
6	107955301	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.538462
6	107955309	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.454545
6	107955356	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.2
6	107955381	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.166667
6	107955390	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.181818
6	107955641	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.111111
6	107955668	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.916667
6	107955669	A->G	-	ENSG00000025796	SEC63	protein_coding	Intergenic	.	.	Alu	0.458333
6	108255467	A->G	-	ENSG00000112335	SNX3	protein_coding	Intergenic	.	.	Alu	0.4
6	108600099	A->G	+	ENSG00000118689	FOXO3	protein_coding	Intergenic	.	.	Alu	0.3
6	108993859	A->G	-	ENSG00000080546	SESN1	protein_coding	Intergenic	.	.	Alu	0.25
6	108995748	A->G	-	ENSG00000080546	SESN1	protein_coding	Intergenic	.	.	Alu	0.15
6	109090974	A->G	-	ENSG00000080546	SESN1	protein_coding	Intergenic	.	.	Alu	0.176471
6	109363533	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	110223108	A->G	+	ENSG00000168438	CDC40	protein_coding	Intergenic	.	.	Alu	0.235294
6	110223116	A->G	+	ENSG00000168438	CDC40	protein_coding	Intergenic	.	.	Alu	0.117647
6	110223133	A->G	+	ENSG00000168438	CDC40	protein_coding	Intergenic	.	.	Alu	0.263158
6	110223136	A->G	+	ENSG00000168438	CDC40	protein_coding	Intergenic	.	.	Alu	0.421053
6	110223218	A->G	+	ENSG00000168438	CDC40	protein_coding	Intergenic	.	.	Alu	0.6875
6	110223224	A->G	+	ENSG00000168438	CDC40	protein_coding	Intergenic	.	.	Alu	0.142857
6	110223282	A->G	+	ENSG00000168438	CDC40	protein_coding	Intergenic	.	.	Alu	0.0769231
6	110880020	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.166667
6	110880056	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.166667
6	110883020	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.166667
6	110896704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
6	110896723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	110896740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
6	110896777	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
6	110896875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	110897046	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
6	111508693	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.454545
6	111508728	A->G	+	ENSG00000231889	TRAF3IP2-AS1	antisense	Intergenic	.	.	Alu	0.2
6	111698159	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.473684
6	111698160	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.105263
6	111698405	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.125
6	111698412	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.666667
6	111698414	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.4
6	111698840	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.3
6	111698841	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.307692
6	111867227	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.111111
6	111867242	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.315789
6	111867267	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.142857
6	116646862	A->G	-	ENSG00000153975	ZUP1	protein_coding	Intergenic	.	.	Alu	0.111111
6	116646871	A->G	-	ENSG00000153975	ZUP1	protein_coding	Intergenic	.	.	Alu	0.176471
6	117699115	A->G	+	ENSG00000153989	NUS1	protein_coding	Intergenic	.	.	Alu	0.538462
6	118853581	A->G	-	ENSG00000111877	MCM9	protein_coding	Intergenic	.	.	Alu	0.2
6	118853583	A->G	-	ENSG00000111877	MCM9	protein_coding	Intergenic	.	.	Alu	0.3
6	118853673	A->G	-	ENSG00000111877	MCM9	protein_coding	Intergenic	.	.	Alu	0.272727
6	118853683	A->G	-	ENSG00000111877	MCM9	protein_coding	Intergenic	.	.	Alu	0.272727
6	118853694	A->G	-	ENSG00000111877	MCM9	protein_coding	Intergenic	.	.	Alu	0.153846
6	118854426	A->G	-	ENSG00000111877	MCM9	protein_coding	Intergenic	.	.	Alu	0.6
6	122414682	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.307692
6	122414725	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.206897
6	122414726	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.103448
6	122414743	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.421053
6	122414752	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.315789
6	122414755	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.380952
6	122415906	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.384615
6	122415910	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.6
6	122415914	A->G	+	ENSG00000025156	HSF2	protein_coding	Intergenic	.	.	Alu	0.6875
6	122441081	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	122466001	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.16
6	122466018	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.0666667
6	122466382	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.125
6	122466509	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.1
6	122466542	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.0571429
6	122466543	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.0857143
6	122466585	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.411765
6	122466609	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.294118
6	122466615	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.117647
6	122467394	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.0869565
6	122469469	A->G	-	ENSG00000111897	SERINC1	protein_coding	Intergenic	.	.	Alu	0.1
6	125897884	A->G	+	ENSG00000111912	NCOA7	protein_coding	Intergenic	.	.	Alu	0.333333
6	125897888	A->G	+	ENSG00000111912	NCOA7	protein_coding	Intergenic	.	.	Alu	0.133333
6	125897914	A->G	+	ENSG00000111912	NCOA7	protein_coding	Intergenic	.	.	Alu	0.133333
6	132509255	A->G	-	ENSG00000079950	STX7	protein_coding	Intergenic	.	.	Alu	0.181818
6	132509369	A->G	-	ENSG00000079950	STX7	protein_coding	Intergenic	.	.	Alu	0.25
6	132691813	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.181818
6	136256512	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
6	138411767	A->G	+	ENSG00000051620	HEBP2	protein_coding	Intergenic	.	.	Alu	0.416667
6	138411876	A->G	+	ENSG00000051620	HEBP2	protein_coding	Intergenic	.	.	Alu	0.333333
6	138412688	A->G	+	ENSG00000051620	HEBP2	protein_coding	Intergenic	.	.	Alu	0.6
6	138412701	A->G	+	ENSG00000051620	HEBP2	protein_coding	Intergenic	.	.	Alu	0.181818
6	138949560	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.181818
6	138949610	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.538462
6	138949614	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.333333
6	138949642	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.142857
6	138952632	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.2
6	138953069	A->G	-	ENSG00000135597	REPS1	protein_coding	Intergenic	.	.	Alu	0.2
6	139142133	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.5
6	139142169	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.0869565
6	139156260	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.133333
6	139156281	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.125
6	139158824	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.111111
6	139159056	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.166667
6	139160688	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.0666667
6	139160690	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.0666667
6	142935303	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	142935304	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	142935366	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.117647
6	142935981	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.0714286
6	142936001	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	142936013	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.157895
6	142936029	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.190476
6	142936049	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.153846
6	142936074	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.3125
6	142936260	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.125
6	142936265	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	142936289	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.153846
6	142936314	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.166667
6	142936462	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.1
6	147211673	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.2
6	147211713	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.166667
6	147211716	A->G	+	ENSG00000164506	STXBP5	protein_coding	Intergenic	.	.	Alu	0.181818
6	149334508	A->G	+	ENSG00000055208	TAB2	protein_coding	Intergenic	.	.	Alu	0.0952381
6	149522644	A->G	-	ENSG00000131013	PPIL4	protein_coding	Intergenic	.	.	Alu	0.181818
6	149523685	A->G	-	ENSG00000131013	PPIL4	protein_coding	Intergenic	.	.	Alu	0.1
6	149523688	A->G	-	ENSG00000131013	PPIL4	protein_coding	Intergenic	.	.	Alu	0.105263
6	149539666	A->G	-	ENSG00000131013	PPIL4	protein_coding	Intergenic	.	.	Alu	0.2
6	149572683	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.1875
6	149572755	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.75
6	149572779	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.25
6	149572845	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.461538
6	149572851	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.333333
6	149572862	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.666667
6	149572927	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149572928	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149572940	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.2
6	149573128	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.181818
6	149573152	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.214286
6	149573207	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.153846
6	149573226	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.333333
6	149573230	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.818182
6	149573250	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.230769
6	149573260	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.666667
6	149574777	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.142857
6	149578366	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.181818
6	149585866	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.142857
6	149586918	A->G	+	ENSG00000055211	GINM1	protein_coding	Intergenic	.	.	Alu	0.133333
6	149592978	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	149703255	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.416667
6	149707411	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.3
6	149712759	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.166667
6	149712797	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.4
6	149712900	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.4
6	154735614	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.117647
6	154735714	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.2
6	154739066	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.363636
6	154739086	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.25
6	154740821	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.125
6	154753907	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.111111
6	154756847	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.363636
6	154757136	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.166667
6	154757209	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.166667
6	154759931	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.3
6	154760127	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.2
6	154761366	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.181818
6	154770449	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.142857
6	154770451	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.133333
6	154770825	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.181818
6	154772568	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.470588
6	154772609	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.166667
6	154772886	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.6
6	154772969	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.166667
6	154773022	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.166667
6	154778503	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.15
6	154778689	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.117647
6	154779133	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.0769231
6	154779172	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.121212
6	154779194	A->G	+	ENSG00000213079	SCAF8	protein_coding	Intergenic	.	.	Alu	0.1
6	156799577	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.166667
6	156799594	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.272727
6	156799752	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.214286
6	156800428	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	156800429	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.272727
6	156830695	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.0714286
6	156830696	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.0689655
6	156830737	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.0833333
6	156835766	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.25
6	156835843	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.117647
6	156835846	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.235294
6	156835854	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.307692
6	156835881	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.230769
6	156858753	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.125
6	156948251	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.272727
6	156948267	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.7
6	156962594	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.25
6	156962595	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.272727
6	156962600	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	156980421	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	157004107	A->G	+	ENSG00000049618	ARID1B	protein_coding	Intergenic	.	.	Alu	0.181818
6	157846926	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.105263
6	157847286	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.272727
6	157847312	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.166667
6	157847364	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.153846
6	157847365	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.142857
6	157847371	A->G	+	ENSG00000130340	SNX9	protein_coding	Intergenic	.	.	Alu	0.266667
6	158653385	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.166667
6	158653451	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.1875
6	158653455	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.176471
6	158653456	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.117647
6	158657187	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.230769
6	158673031	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.384615
6	158673196	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.2
6	158673919	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.142857
6	158673922	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.153846
6	158673923	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.153846
6	158673934	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.230769
6	158685313	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.4
6	158685314	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.3
6	158689754	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.153846
6	158765477	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
6	158780020	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.333333
6	158780100	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.181818
6	158789819	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.166667
6	158792715	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.2
6	158801073	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.307692
6	158801293	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.166667
6	158808883	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.0869565
6	159732636	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0689655
6	159735240	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.181818
6	159735278	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.8
6	159735280	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.272727
6	159735326	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.263158
6	159735341	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.454545
6	159735350	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.2
6	159735400	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.363636
6	159735401	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.136364
6	159735413	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.636364
6	159735415	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0909091
6	159735495	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.484848
6	159735496	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.647059
6	159735559	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.342857
6	159735573	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.173913
6	159735618	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.25
6	159742794	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.142857
6	159742988	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0666667
6	159743281	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	159743299	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.347826
6	159743309	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0714286
6	159743323	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0625
6	159752840	A->G	+	ENSG00000285441	SOD2	protein_coding	Intergenic	.	.	Alu	0.0967742
6	159796349	A->G	+	ENSG00000112110	MRPL18	protein_coding	Intergenic	.	.	Alu	0.2
6	163493561	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.227273
6	163493583	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.315789
6	163509088	A->G	+	ENSG00000112531	QKI	protein_coding	Intergenic	.	.	Alu	0.166667
6	167013414	A->G	+	ENSG00000213066	FGFR1OP	protein_coding	Intergenic	.	.	Alu	0.4
6	169717197	A->G	-	ENSG00000130024	PHF10	protein_coding	Intergenic	.	.	Alu	0.214286
6	170359254	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.5
6	170359258	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.285714
6	170359273	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.642857
6	170359343	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.266667
6	170359673	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.214286
6	170359674	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.533333
6	170359678	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.142857
6	170359700	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.142857
6	170359701	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.5
7	100076827	A->G	-	ENSG00000166526	ZNF3	protein_coding	Intergenic	.	.	Alu	0.2
7	100076829	A->G	-	ENSG00000166526	ZNF3	protein_coding	Intergenic	.	.	Alu	0.125
7	100276394	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
7	100286679	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	100286680	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	100286690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	100343471	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	100343482	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	100343528	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.555556
7	100343531	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.807692
7	100343541	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
7	100343582	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.238095
7	100343592	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	100343607	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.9375
7	100343639	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	100343661	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.384615
7	100343662	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.583333
7	100343674	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	100343873	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	100343895	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.428571
7	100343896	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.642857
7	100343904	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
7	100343943	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	100343967	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
7	100343970	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.15
7	100344020	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.368421
7	100344031	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.47619
7	100354414	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.363636
7	100354457	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.6
7	100354643	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.2
7	100360004	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.153846
7	100360006	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.25
7	100360007	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.333333
7	100360009	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.25
7	100361209	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.117647
7	100361434	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.285714
7	100362621	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.133333
7	100364057	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.133333
7	100364063	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.125
7	100365590	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.307692
7	100365599	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.142857
7	100365719	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.25
7	100365773	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.2
7	100366156	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.4
7	100366188	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.466667
7	100368951	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.166667
7	100369012	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.214286
7	100369028	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.75
7	100369031	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.176471
7	100369059	A->G	+	ENSG00000085514	PILRA	protein_coding	Intergenic	.	.	Alu	0.0952381
7	102533121	A->G	-	ENSG00000272949	AC093668.2	protein_coding	Intergenic	.	.	Alu	0.611111
7	102544289	A->G	-	ENSG00000168255	POLR2J3	protein_coding	Intergenic	.	.	Alu	0.3
7	102544290	A->G	-	ENSG00000168255	POLR2J3	protein_coding	Intergenic	.	.	Alu	0.636364
7	103304838	A->G	+	ENSG00000105819	PMPCB	protein_coding	Intergenic	.	.	Alu	0.25
7	103307157	A->G	+	ENSG00000105819	PMPCB	protein_coding	Intergenic	.	.	Alu	0.166667
7	103307158	A->G	+	ENSG00000105819	PMPCB	protein_coding	Intergenic	.	.	Alu	0.166667
7	103325181	A->G	-	ENSG00000105819	PMPCB	protein_coding	Intergenic	.	.	Alu	0.117647
7	104999039	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.2
7	105007755	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.214286
7	105023347	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1875
7	105028566	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.269231
7	105029083	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0952381
7	105029112	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0833333
7	105029113	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.136364
7	105031195	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105031605	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.176471
7	105031631	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0833333
7	105032602	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105032668	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.307692
7	105033638	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.105263
7	105033706	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105034259	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.181818
7	105042056	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.333333
7	105042225	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0416667
7	105042226	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.06
7	105042914	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.380952
7	105044085	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.117647
7	105048095	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0789474
7	105048115	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105048116	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.15
7	105048178	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.147059
7	105048317	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1
7	105049283	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1
7	105049305	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0869565
7	105052698	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.137931
7	105052760	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.0909091
7	105053674	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.105263
7	105057544	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.1
7	105067851	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105068472	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.142857
7	105068530	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105068749	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.4
7	105071388	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.352941
7	105071389	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.235294
7	105071428	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.375
7	105071466	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.25
7	105081263	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.363636
7	105098640	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105538259	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.285714
7	105540294	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.416667
7	105540401	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.25
7	105540403	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.125
7	105540482	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.117647
7	105540523	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.142857
7	105540530	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.125
7	105541302	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.153846
7	105541346	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.153846
7	105541411	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.615385
7	105541413	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.153846
7	106877012	A->G	+	ENSG00000105851	PIK3CG	protein_coding	Intergenic	.	.	Alu	0.153846
7	107172430	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.2
7	107172776	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.08
7	107483523	A->G	-	ENSG00000164597	COG5	protein_coding	Intergenic	.	.	Alu	0.3
7	108478671	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.133333
7	108482254	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.2
7	108482308	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.133333
7	112343851	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.266667
7	112455424	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.545455
7	116865817	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.176471
7	116869901	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.2
7	116874968	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.133333
7	116874969	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.133333
7	116875640	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.117647
7	116875659	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.105263
7	116875686	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.526316
7	116875738	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.142857
7	116875755	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.105263
7	116876170	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.181818
7	116876171	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.363636
7	120954211	A->G	+	ENSG00000071243	ING3	protein_coding	Intergenic	.	.	Alu	0.2
7	120955228	A->G	+	ENSG00000071243	ING3	protein_coding	Intergenic	.	.	Alu	0.166667
7	120955258	A->G	+	ENSG00000071243	ING3	protein_coding	Intergenic	.	.	Alu	0.272727
7	123721700	A->G	-	ENSG00000106299	WASL	protein_coding	Intergenic	.	.	Alu	0.166667
7	128536367	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	128538169	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.214286
7	128544128	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
7	128545157	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	128546468	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
7	128548859	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	128549800	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
7	128555393	A->G	+	ENSG00000280828	AC090114.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	128631721	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
7	128631728	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
7	128631768	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0638298
7	128653262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.342105
7	128653265	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
7	128653270	A->G	+	.	.	.	Intergenic	.	.	Alu	0.314286
7	128653318	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
7	128653341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
7	128659234	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
7	128659252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
7	128659276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
7	128659296	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
7	128659372	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
7	128659704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
7	128659707	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
7	129031982	A->G	-	ENSG00000064419	TNPO3	protein_coding	Intergenic	.	.	Alu	0.3
7	129614350	A->G	+	ENSG00000106459	NRF1	protein_coding	Intergenic	.	.	Alu	0.181818
7	129614527	A->G	+	ENSG00000106459	NRF1	protein_coding	Intergenic	.	.	Alu	0.2
7	129842646	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.230769
7	129842668	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.3
7	129846257	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129848217	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.3
7	129850570	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.153846
7	129896584	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.3
7	129896589	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.181818
7	129918952	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.294118
7	129918954	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.111111
7	129918984	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.166667
7	129919027	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.2
7	129922410	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.153846
7	129922423	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.142857
7	129922424	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.214286
7	129924206	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.142857
7	129926583	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.176471
7	129929888	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.153846
7	129938193	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.111111
7	129938591	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.181818
7	129941330	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.285714
7	129941366	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.230769
7	129941377	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.181818
7	129941736	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.3
7	129943819	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.666667
7	129943820	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.727273
7	129944490	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.0952381
7	129944512	A->G	-	ENSG00000186591	UBE2H	protein_coding	Intergenic	.	.	Alu	0.166667
7	130900356	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.142857
7	130934931	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130935117	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130954519	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.133333
7	130954541	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.190476
7	130954572	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.117647
7	130954638	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0909091
7	130954691	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.115385
7	130954716	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0833333
7	130954740	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0810811
7	130957919	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0645161
7	130957946	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0740741
7	130958640	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.105263
7	130958719	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.125
7	130964586	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.25
7	130964590	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.333333
7	130964727	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.25
7	130964733	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	130964742	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130965997	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.352941
7	130966025	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.4
7	130966332	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.111111
7	130966342	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1
7	130966355	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130989834	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.181818
7	130990148	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130990394	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.2
7	131004196	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.181818
7	131004201	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.181818
7	131019941	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0645161
7	131041879	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	131044026	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	131044036	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	131044551	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.272727
7	131044739	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.2
7	131055085	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	131057737	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1875
7	131057738	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1875
7	131058235	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.214286
7	131061596	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.181818
7	131080659	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.416667
7	131081480	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.416667
7	131081551	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	131087987	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1
7	131089063	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0952381
7	131089074	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1
7	131089148	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.181818
7	131089189	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.157895
7	131089225	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.117647
7	131091742	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0869565
7	131091894	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.2
7	131093597	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0952381
7	131093623	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.107143
7	131093626	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.130435
7	131093647	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0769231
7	131093675	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.16
7	131332158	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.5
7	131426854	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.3
7	131426896	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.272727
7	131427592	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.2
7	131427711	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.272727
7	131427776	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.4
7	131427815	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.2
7	131427816	A->G	+	ENSG00000128585	MKLN1	protein_coding	Intergenic	.	.	Alu	0.363636
7	135479654	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.214286
7	135480631	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.105263
7	135483940	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.2
7	135484119	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.166667
7	135493313	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.3
7	135497309	A->G	-	ENSG00000080802	CNOT4	protein_coding	Intergenic	.	.	Alu	0.6
7	135972822	A->G	-	ENSG00000105887	MTPN	protein_coding	Intergenic	.	.	Alu	0.3
7	135973067	A->G	-	ENSG00000105887	MTPN	protein_coding	Intergenic	.	.	Alu	0.4
7	135973068	A->G	-	ENSG00000105887	MTPN	protein_coding	Intergenic	.	.	Alu	0.4
7	139058338	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.117647
7	139070870	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.230769
7	139073039	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0588235
7	139073051	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.114286
7	139073066	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139073079	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0714286
7	139073099	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.227273
7	139073199	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0740741
7	139073216	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.130435
7	139073670	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.181818
7	139073737	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.238095
7	139073763	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139073764	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.08
7	139076726	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.166667
7	139080519	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0490196
7	139083644	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139083651	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.24
7	139083700	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0540541
7	139096889	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.166667
7	139096915	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.166667
7	139367003	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.06
7	139367051	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.05
7	139367137	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.111111
7	139367152	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0555556
7	139367155	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.205882
7	139367192	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.108108
7	139367207	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0512821
7	139370616	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.047619
7	139370638	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.117647
7	139370716	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0625
7	139377260	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0689655
7	139377304	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0512821
7	139377305	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.105263
7	139377920	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	139377930	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0689655
7	139377944	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0606061
7	139377967	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0555556
7	139378008	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0540541
7	139378023	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.15625
7	139378428	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0555556
7	139378921	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.133333
7	139379031	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0571429
7	139379107	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.310345
7	139379131	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.176471
7	139379246	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.105263
7	139379964	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.3
7	139380007	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139380022	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.636364
7	139380136	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.4375
7	139380161	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.142857
7	139380163	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.214286
7	139380316	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.117647
7	139380336	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.538462
7	139380339	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.142857
7	139381702	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	139382384	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.16
7	139382408	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.12
7	139382447	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	139382462	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0540541
7	139382463	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.135135
7	139382514	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.128205
7	139382628	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139382673	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139384365	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.111111
7	139384383	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.214286
7	139384760	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	139384873	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	139390361	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	139390378	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.125
7	139392875	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.153846
7	139392876	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.166667
7	139393608	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.1
7	139393644	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139395692	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.142857
7	139395741	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0833333
7	139395793	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.08
7	139395853	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.882353
7	139395882	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.826087
7	139395883	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.173913
7	139395887	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.190476
7	139395922	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.130435
7	139399676	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	140043059	A->G	-	ENSG00000059378	PARP12	protein_coding	Intergenic	.	.	Alu	0.454545
7	140043072	A->G	-	ENSG00000059378	PARP12	protein_coding	Intergenic	.	.	Alu	0.5
7	140461398	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	140461471	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	140461521	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.266667
7	140461535	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.133333
7	140461601	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.375
7	140461739	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140461821	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.117647
7	140461926	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	140462120	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.272727
7	140462125	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.363636
7	140462144	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.4
7	140462172	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.235294
7	140462228	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.304348
7	140462261	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.125
7	140462280	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.111111
7	140464321	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140464344	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	140464474	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140464537	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.266667
7	140464540	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.125
7	140464583	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.176471
7	140464622	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.1875
7	140464666	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.222222
7	140464861	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.6
7	140464929	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.230769
7	140464955	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.125
7	140464999	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	140465372	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.181818
7	140465388	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	140465442	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.173913
7	140469082	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.105263
7	140469083	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.1
7	140469696	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	140470105	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	140471181	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.125
7	140471203	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.142857
7	140471584	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.125
7	140471608	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.380952
7	140471634	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.0869565
7	140471673	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.458333
7	140471674	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.12
7	140471716	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.1875
7	140769302	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140872803	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.2
7	140888796	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.307692
7	140906294	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.166667
7	140906375	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.181818
7	140912070	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.166667
7	140919981	A->G	-	ENSG00000157764	BRAF	protein_coding	Intergenic	.	.	Alu	0.125
7	141677300	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.272727
7	141677301	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.545455
7	141677304	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.454545
7	141677305	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.272727
7	141683543	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.3
7	141684049	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.2
7	141684066	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.2
7	141684092	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.117647
7	141684127	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.15
7	141684196	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.526316
7	141747438	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intergenic	.	.	Alu	0.846154
7	141747443	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intergenic	.	.	Alu	0.181818
7	141747464	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intergenic	.	.	Alu	0.615385
7	141747785	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intergenic	.	.	Alu	0.25
7	141747790	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intergenic	.	.	Alu	0.769231
7	141747800	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intergenic	.	.	Alu	0.142857
7	141747814	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intergenic	.	.	Alu	0.2
7	142462115	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
7	143298999	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.133333
7	143299053	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.294118
7	143299101	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.142857
7	143299102	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.4
7	143299105	A->G	+	ENSG00000106144	CASP2	protein_coding	Intergenic	.	.	Alu	0.142857
7	148811279	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.2
7	148811289	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.3
7	148811295	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.4
7	148811423	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.6
7	148821763	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.1875
7	148823719	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.181818
7	148824231	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.142857
7	148828493	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.545455
7	148858632	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.105263
7	148858653	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.105263
7	148858664	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.454545
7	148858690	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.375
7	148858693	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.0869565
7	148870459	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.1
7	148870491	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.421053
7	148870500	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.411765
7	148870519	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.153846
7	148870581	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.277778
7	148870603	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.133333
7	148870766	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.125
7	148870846	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.25
7	148870847	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.133333
7	148878219	A->G	-	ENSG00000106462	EZH2	protein_coding	Intergenic	.	.	Alu	0.333333
7	149241179	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.2
7	149242261	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.111111
7	149242265	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.411765
7	149242304	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.1
7	149245623	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.3
7	149245741	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.125
7	149483347	A->G	-	ENSG00000181220	ZNF746	protein_coding	Intergenic	.	.	Alu	0.363636
7	149483356	A->G	-	ENSG00000181220	ZNF746	protein_coding	Intergenic	.	.	Alu	0.363636
7	149483378	A->G	-	ENSG00000181220	ZNF746	protein_coding	Intergenic	.	.	Alu	0.181818
7	149601108	A->G	-	ENSG00000133624	ZNF767P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	149601109	A->G	-	ENSG00000133624	ZNF767P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	149611764	A->G	-	ENSG00000133624	ZNF767P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0740741
7	151093241	A->G	+	ENSG00000133612	AGAP3	protein_coding	Intergenic	.	.	Alu	0.105263
7	151495694	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.315789
7	151495725	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.125
7	151495729	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.222222
7	151495779	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.181818
7	151495836	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.153846
7	151495840	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.4
7	151495858	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.176471
7	151500081	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.0952381
7	151500083	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.190476
7	151500677	A->G	-	ENSG00000106615	RHEB	protein_coding	Intergenic	.	.	Alu	0.181818
7	152157176	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152157206	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152157219	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.363636
7	152241419	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152241424	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152243780	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.157895
7	152306962	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152309626	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152310357	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.272727
7	152353622	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.5
7	152399084	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.117647
7	152404418	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.115385
7	152404452	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.111111
7	152404463	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.117647
7	152405908	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152405921	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.176471
7	152406252	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.111111
7	152406590	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.5
7	152406601	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152406784	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152406791	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.478261
7	152406793	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0833333
7	152408103	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0833333
7	152408105	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152408241	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152408244	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.333333
7	152409026	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.263158
7	152409087	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0952381
7	152409113	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.08
7	152409132	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0769231
7	152409137	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.5
7	152409177	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0740741
7	152409186	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0952381
7	152409187	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1
7	152409206	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.192308
7	152409225	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0833333
7	152409226	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.44
7	152409234	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.28
7	152409279	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.217391
7	152409280	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152409286	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152409472	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152410161	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.157895
7	152410182	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152413181	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152413217	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152413222	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.214286
7	152413822	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152414656	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152414699	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152414777	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152415624	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152415696	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.153846
7	152415710	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152415797	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.214286
7	152416807	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.266667
7	152416834	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.117647
7	152416854	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152416887	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152416927	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.5
7	152416986	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152422181	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.1
7	152424216	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0740741
7	152424252	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0909091
7	152424265	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152424515	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152424521	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	152424561	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.142857
7	152424619	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
7	152424623	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.15
7	152424643	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.130435
7	152425319	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.117647
7	152425384	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.5
7	152425393	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152425396	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152425465	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.111111
7	152425510	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0869565
7	152425514	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.130435
7	152427082	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.117647
7	152429597	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152429606	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.2
7	152429636	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.181818
7	152430140	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.190476
7	152430164	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152430584	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.235294
7	152430663	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152430670	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.375
7	152430676	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.133333
7	152430680	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.3125
7	152430801	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.176471
7	152430806	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.117647
7	152430813	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.176471
7	152431355	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0952381
7	152431409	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.214286
7	152432890	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.210526
7	152432925	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0666667
7	152432926	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.0666667
7	152432964	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.173913
7	152432975	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.136364
7	152433026	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.25
7	152433104	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.210526
7	156845685	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.153846
7	156845692	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.4
7	156868296	A->G	-	ENSG00000105983	LMBR1	protein_coding	Intergenic	.	.	Alu	0.25
7	157232375	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.153846
7	157343289	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.1
7	157359411	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.142857
7	157359413	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.357143
7	157359473	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.4
7	157367982	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.027027
7	157373005	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0240964
7	157373565	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0645161
7	157373936	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0519481
7	157373971	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0243902
7	157374292	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0833333
7	157376695	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.142857
7	157376721	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.117647
7	158738010	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.111111
7	158738022	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.117647
7	158738023	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.147059
7	158738099	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0645161
7	158738148	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.117647
7	158738151	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.470588
7	158738164	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.294118
7	158738190	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158738226	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.3
7	158738520	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	158738522	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.608696
7	158738540	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.266667
7	158738551	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.153846
7	158738557	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.4375
7	158738580	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.545455
7	158738631	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.142857
7	158738646	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.692308
7	158738647	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.538462
7	158738725	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.785714
7	158738726	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158738734	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.176471
7	158739551	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.3
7	158739629	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158746124	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.5
7	158746136	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158746189	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158768580	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158768584	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158768832	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.875
7	158769954	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0869565
7	158769957	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.375
7	158770902	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.125
7	158770914	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.368421
7	158770931	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.178571
7	158770932	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0714286
7	158770980	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.238095
7	158771862	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158771874	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158771902	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.307692
7	158772059	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.230769
7	158772108	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.3
7	158772113	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.9
7	158776949	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158776955	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.133333
7	158789549	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.111111
7	158790676	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.533333
7	158790773	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.4
7	158790845	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.615385
7	158790889	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158790914	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.157895
7	158790922	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	158792327	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.25
7	158792406	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.222222
7	158792471	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	158792509	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158792522	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.357143
7	158822608	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.111111
7	158823036	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.222222
7	158823048	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.142857
7	158823081	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158823082	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.363636
7	158823598	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.631579
7	158823599	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.294118
7	158823605	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.235294
8	100254221	A->G	-	ENSG00000104450	SPAG1	protein_coding	Intergenic	.	.	Alu	0.125
8	100254222	A->G	-	ENSG00000104450	SPAG1	protein_coding	Intergenic	.	.	Alu	0.125
8	100260508	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.0465116
8	100277450	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.125
8	100277481	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.0833333
8	100299077	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.142857
8	100300157	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.3125
8	100303706	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.142857
8	100303719	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.230769
8	100303816	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.25
8	100303853	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.142857
8	100304053	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.235294
8	100304062	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.111111
8	100304095	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.266667
8	100304113	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.272727
8	100304117	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.5
8	100304155	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.157895
8	100304204	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.111111
8	100304247	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.142857
8	100713582	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0824742
8	100713652	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0327869
8	100713712	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0214286
8	100713719	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0551181
8	100713720	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0555556
8	100713773	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.161616
8	100714474	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0422535
8	100714539	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.222222
8	100714551	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0571429
8	100714568	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0263158
8	100714587	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0363636
8	100714634	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0943396
8	100714667	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0232558
8	100716159	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.103093
8	100716160	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.104167
8	100716179	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0566038
8	100716186	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0695652
8	100716230	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0425532
8	100716236	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.152174
8	100716239	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0319149
8	100716256	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0833333
8	100716261	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0227273
8	100716279	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.297619
8	100716289	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0769231
8	100716293	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0273973
8	100716314	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.239583
8	100716344	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0215054
8	100716393	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0958904
8	100716719	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0291971
8	100716737	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.03
8	100716801	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0222222
8	100717109	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.1
8	100717113	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.454545
8	100717117	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0892857
8	100717122	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.037037
8	100717148	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.172414
8	100717149	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.109091
8	100717167	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.04
8	100717175	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.218182
8	100717215	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.212766
8	100717221	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0545455
8	100717226	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0392157
8	100927424	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.111111
8	100927442	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.117647
8	100927508	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.107143
8	100928035	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0625
8	100928036	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.125
8	100928090	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.259259
8	100928098	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.304348
8	100928158	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.117647
8	100928180	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.263158
8	100928228	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.2
8	100928266	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.2
8	100928681	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.09375
8	100928686	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0666667
8	100929230	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0952381
8	100929324	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.1875
8	100929328	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.133333
8	100929337	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.266667
8	100929338	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.142857
8	100929419	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.2
8	100929446	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.133333
8	100929473	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.25
8	100946499	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.037037
8	102347557	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102347750	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.230769
8	102347792	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.133333
8	102347793	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102347846	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102348059	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.583333
8	102348077	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.142857
8	102348081	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.285714
8	102348102	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.133333
8	102349482	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.15
8	102357512	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102357513	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.230769
8	102377473	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.25
8	102377503	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102381303	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.142857
8	102390264	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.125
8	102390337	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.4
8	102390966	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.111111
8	102393407	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.0740741
8	102394238	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102394239	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.272727
8	102394240	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.272727
8	102394316	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.176471
8	102399490	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.125
8	102399549	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.466667
8	102399550	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.3125
8	102402209	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.277778
8	102403544	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.157895
8	102403768	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.368421
8	102405820	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.166667
8	102407139	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.230769
8	102407145	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.181818
8	102407519	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.4
8	102407520	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.2
8	102407548	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.227273
8	102407553	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.16
8	102407554	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.16
8	102407597	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.08
8	102407600	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.321429
8	102407614	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.0909091
8	102407615	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.3125
8	102407685	A->G	-	ENSG00000104517	UBR5	protein_coding	Intergenic	.	.	Alu	0.153846
8	102840447	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.272727
8	102849171	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.105263
8	102853318	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.125
8	102853450	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.3
8	103421751	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.5
8	103421752	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.6
8	103421818	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.5
8	103423367	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.785714
8	103423371	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.4375
8	108226374	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.166667
8	108226433	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.142857
8	108227090	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.4
8	108227107	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.5
8	108227216	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.181818
8	109471878	A->G	+	ENSG00000205038	PKHD1L1	protein_coding	Intergenic	.	.	Alu	1
8	114008139	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
8	114008146	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
8	114008159	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
8	114008160	A->G	+	.	.	.	Intergenic	.	.	Alu	0.583333
8	114013349	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	114160849	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	114160850	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
8	115547958	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.2
8	115547965	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.266667
8	115547974	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.5
8	115547986	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.5
8	115548187	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.6
8	115548188	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.4
8	115548200	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.166667
8	115557412	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.5
8	115557422	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.25
8	115557533	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.5
8	115557678	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.714286
8	115639268	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.133333
8	115639348	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.166667
8	115639752	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.176471
8	115639815	A->G	-	ENSG00000104447	TRPS1	protein_coding	Intergenic	.	.	Alu	0.5
8	116748147	A->G	-	ENSG00000147677	EIF3H	protein_coding	Intergenic	.	.	Alu	0.214286
8	116857496	A->G	-	ENSG00000164754	RAD21	protein_coding	Intergenic	.	.	Alu	0.764706
8	119803658	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.181818
8	119805590	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.142857
8	119805659	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.166667
8	119805934	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.0833333
8	119807870	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.2
8	119813851	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.0869565
8	119813871	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.2
8	119813872	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.16
8	119813933	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.2
8	119813960	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.2
8	119814012	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.25
8	119814029	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.363636
8	119814089	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.153846
8	119814659	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.214286
8	119821786	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.166667
8	119821932	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.111111
8	119825707	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.0952381
8	119826663	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.117647
8	119826687	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.428571
8	119826729	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.538462
8	119827980	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.2
8	119827985	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.181818
8	119830843	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.111111
8	119830860	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.173913
8	119831101	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.266667
8	119832076	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.105263
8	119832155	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.157895
8	119832156	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.2
8	122798792	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.0769231
8	122801666	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.166667
8	122802128	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.166667
8	123033136	A->G	-	ENSG00000136986	DERL1	protein_coding	Intergenic	.	.	Alu	0.0625
8	123228556	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.2
8	123229760	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.3
8	123230528	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.0625
8	123230546	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.0666667
8	123231084	A->G	-	ENSG00000189376	C8orf76	protein_coding	Intergenic	.	.	Alu	0.421053
8	123347964	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.4375
8	123353171	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.125
8	123353950	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.2
8	123373328	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.2
8	123374241	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.222222
8	123374270	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.133333
8	123374277	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.222222
8	123374291	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.176471
8	123374319	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.666667
8	123374331	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.307692
8	123378996	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.3
8	123378997	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.7
8	123379077	A->G	-	ENSG00000156802	ATAD2	protein_coding	Intergenic	.	.	Alu	0.1875
8	123779239	A->G	+	ENSG00000176853	FAM91A1	protein_coding	Intergenic	.	.	Alu	0.538462
8	123783096	A->G	+	ENSG00000176853	FAM91A1	protein_coding	Intergenic	.	.	Alu	0.153846
8	123803523	A->G	+	ENSG00000176853	FAM91A1	protein_coding	Intergenic	.	.	Alu	0.142857
8	125072090	A->G	-	ENSG00000164961	WASHC5	protein_coding	Intergenic	.	.	Alu	0.157895
8	125086426	A->G	-	ENSG00000164961	WASHC5	protein_coding	Intergenic	.	.	Alu	0.1875
8	125088303	A->G	-	ENSG00000164961	WASHC5	protein_coding	Intergenic	.	.	Alu	0.461538
8	125095332	A->G	+	ENSG00000156831	NSMCE2	protein_coding	Intergenic	.	.	Alu	0.230769
8	129848625	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	129889081	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.111111
8	129943339	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intergenic	.	.	Alu	0.285714
8	129943352	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intergenic	.	.	Alu	0.25
8	129965886	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1875
8	129965887	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	129965912	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.105263
8	129965955	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.5
8	129965957	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	129966029	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	129966036	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	129966039	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.230769
8	129966050	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.142857
8	129966100	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.142857
8	129966124	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	129966163	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.266667
8	129973750	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0833333
8	129978020	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.157895
8	129978102	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.111111
8	129978119	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	129978152	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.105263
8	129978173	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.333333
8	129980970	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.111111
8	129981430	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1
8	129990574	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129990576	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	129990701	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.285714
8	129990705	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	129990706	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.333333
8	129990723	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.588235
8	129990743	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.105263
8	129990796	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	129990813	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.769231
8	129990880	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.6
8	129999895	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	130002204	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.162162
8	130002216	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.142857
8	130002217	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0625
8	130002269	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0952381
8	130002392	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.130435
8	130002404	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0909091
8	130002893	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0952381
8	130002974	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.105263
8	130003204	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.16129
8	130004323	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0869565
8	130004931	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.142857
8	130006220	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0769231
8	130006423	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	130008043	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.153846
8	130008046	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.25
8	130011613	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.125
8	130011711	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.230769
8	130011721	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.142857
8	130011831	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.1
8	130353687	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.25
8	130353784	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.2
8	130353788	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.3
8	130353795	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.636364
8	130353814	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.230769
8	130353819	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	130353857	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.333333
8	130354025	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.461538
8	130354091	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.461538
8	131909273	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.0952381
8	131909287	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.0833333
8	131909289	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.0869565
8	131909295	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.105263
8	131909301	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.0869565
8	131909350	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.125
8	131909369	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.291667
8	131909466	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.473684
8	131910352	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.3
8	131910367	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.3
8	131910535	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.111111
8	131910544	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.0869565
8	131947931	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.454545
8	133279132	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.153846
8	133492470	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	133507263	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.461538
8	133519828	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	133519914	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	133519948	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	133556177	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	133562039	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.1875
8	133562074	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.428571
8	133562076	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.133333
8	134827114	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
8	134827144	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
8	134827168	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
8	134827551	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
8	134827611	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
8	134827705	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
8	140594570	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.153846
8	140594591	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.181818
8	140596121	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.105263
8	140596327	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.125
8	140596338	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.130435
8	140605376	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.166667
8	140606707	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.181818
8	140610137	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.142857
8	140610153	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.545455
8	140613010	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.166667
8	140614168	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.133333
8	140617288	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.166667
8	140617349	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.181818
8	140617350	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.166667
8	140617373	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.181818
8	140618809	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.272727
8	140618810	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.166667
8	140620808	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.130435
8	140620809	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.347826
8	140620817	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.3125
8	141143640	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.125
8	141143641	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.0833333
8	141161852	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.181818
8	141168626	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.142857
8	141172818	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.285714
8	141183326	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.1875
8	141185570	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.2
8	141185640	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.266667
8	141185642	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.133333
8	141185661	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.428571
8	141188083	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.333333
8	141188129	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.125
8	141188180	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.35
8	143030219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	143031073	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
8	143031131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
8	144749434	A->G	-	ENSG00000198169	ZNF251	protein_coding	Intergenic	.	.	Alu	0.153846
8	144840003	A->G	-	ENSG00000147789	ZNF7	protein_coding	Intergenic	.	.	Alu	0.157895
9	100023898	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.181818
9	105706918	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.2
9	105707030	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.105263
9	105712018	A->G	+	ENSG00000095209	TMEM38B	protein_coding	Intergenic	.	.	Alu	0.5
9	107293853	A->G	+	ENSG00000119318	RAD23B	protein_coding	Intergenic	.	.	Alu	0.166667
9	109085266	A->G	-	ENSG00000106771	TMEM245	protein_coding	Intergenic	.	.	Alu	0.214286
9	111479774	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.181818
9	111479867	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.2
9	112313036	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.166667
9	112313358	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.3
9	112314563	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.5
9	112328707	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.230769
9	112329984	A->G	-	ENSG00000119314	PTBP3	protein_coding	Intergenic	.	.	Alu	0.181818
9	114354929	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.363636
9	114354999	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.133333
9	114593877	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.153846
9	114594163	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.111111
9	114595579	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.2
9	120784716	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.3
9	120785817	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.181818
9	121082895	A->G	+	ENSG00000119397	CNTRL	protein_coding	Intergenic	.	.	Alu	0.2
9	122902588	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.153846
9	122902602	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.3
9	122902634	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.166667
9	122902643	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.285714
9	122902695	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.125
9	122902704	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.4
9	122902759	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.230769
9	122902769	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.5
9	122902770	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.272727
9	122925170	A->G	-	ENSG00000171448	ZBTB26	protein_coding	Intergenic	.	.	Alu	0.2
9	122944288	A->G	+	ENSG00000011454	RABGAP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	122944363	A->G	+	ENSG00000011454	RABGAP1	protein_coding	Intergenic	.	.	Alu	0.307692
9	124374628	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.222222
9	124374642	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.230769
9	124374716	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.2
9	124375285	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.111111
9	124375299	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.3
9	124375367	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.105263
9	124375436	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.1875
9	124375437	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.235294
9	124375459	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.1875
9	124375464	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.176471
9	124382359	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.125
9	124403488	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.272727
9	124403490	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.3
9	124405780	A->G	-	ENSG00000136930	PSMB7	protein_coding	Intergenic	.	.	Alu	0.6
9	125159900	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.181818
9	125166752	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.125
9	125167927	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.166667
9	125167930	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.25
9	125172371	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.272727
9	125172379	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.2
9	125185282	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.2
9	125334716	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.380952
9	125335897	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.181818
9	126810765	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.166667
9	126810768	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.166667
9	126810777	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.230769
9	126822485	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.25
9	126822487	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.166667
9	126822504	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.181818
9	126824166	A->G	+	ENSG00000169155	ZBTB43	protein_coding	Intergenic	.	.	Alu	0.2
9	127791362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
9	127791374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.315789
9	127791400	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
9	127793101	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127795314	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.153846
9	128770952	A->G	-	ENSG00000160445	ZER1	protein_coding	Intergenic	.	.	Alu	0.125
9	128770977	A->G	-	ENSG00000160445	ZER1	protein_coding	Intergenic	.	.	Alu	0.333333
9	128989212	A->G	+	ENSG00000095319	NUP188	protein_coding	Intergenic	.	.	Alu	0.153846
9	128989215	A->G	+	ENSG00000095319	NUP188	protein_coding	Intergenic	.	.	Alu	0.153846
9	128989290	A->G	+	ENSG00000095319	NUP188	protein_coding	Intergenic	.	.	Alu	0.294118
9	128989294	A->G	+	ENSG00000095319	NUP188	protein_coding	Intergenic	.	.	Alu	0.470588
9	129844927	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.181818
9	129844928	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.25
9	129845660	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.545455
9	129911080	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.25
9	129911129	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129913086	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129913909	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129914265	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.222222
9	129917287	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129917292	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	129917295	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	129923010	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.176471
9	129923062	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.25
9	129923082	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.285714
9	129923109	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	129923336	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.117647
9	129923337	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.117647
9	129952467	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.3
9	129952484	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.272727
9	129954771	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.147059
9	129954780	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0540541
9	129954840	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.1
9	129954885	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0869565
9	129954894	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	129954981	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.105263
9	129955269	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.12
9	129955299	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.130435
9	129955306	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129955398	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129955415	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0645161
9	129955437	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0571429
9	129955463	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0625
9	129955478	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0714286
9	129955486	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0869565
9	129955487	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.285714
9	129955508	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.176471
9	129955511	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	129955638	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.115385
9	129955715	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	129955719	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	130015777	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	130015839	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.1
9	130015902	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	130016660	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.230769
9	130016712	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.157895
9	130018724	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.266667
9	130018968	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.210526
9	130020469	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	130022975	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.105263
9	130024333	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.136364
9	130029395	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.05
9	130029921	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.15
9	130038111	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	130038646	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.363636
9	130087501	A->G	+	ENSG00000148358	GPR107	protein_coding	Intergenic	.	.	Alu	0.181818
9	130584984	A->G	+	ENSG00000107164	FUBP3	protein_coding	Intergenic	.	.	Alu	0.2
9	130586023	A->G	+	ENSG00000107164	FUBP3	protein_coding	Intergenic	.	.	Alu	0.333333
9	130586050	A->G	+	ENSG00000107164	FUBP3	protein_coding	Intergenic	.	.	Alu	0.133333
9	130586068	A->G	+	ENSG00000107164	FUBP3	protein_coding	Intergenic	.	.	Alu	0.2
9	130586098	A->G	+	ENSG00000107164	FUBP3	protein_coding	Intergenic	.	.	Alu	0.166667
9	130586099	A->G	+	ENSG00000107164	FUBP3	protein_coding	Intergenic	.	.	Alu	0.166667
9	130699793	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.272727
9	130700100	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.8
9	130700105	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.4
9	130700106	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.545455
9	130707268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130841277	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.2
9	130841381	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.181818
9	131396540	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0833333
9	131398745	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131398750	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.166667
9	131398828	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0909091
9	131401673	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.133333
9	131403991	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.111111
9	131404016	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.105263
9	131404049	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.15
9	131404456	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.0952381
9	131404465	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.105263
9	131411047	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.272727
9	131411604	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.25
9	131423979	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.214286
9	131424016	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.2
9	131424075	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.285714
9	131424077	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.214286
9	131424125	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.166667
9	131424202	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.230769
9	131439846	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.210526
9	131439873	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.266667
9	131439875	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.285714
9	131440154	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.125
9	131440334	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.347826
9	131441017	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131441073	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.117647
9	131441425	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.1875
9	131441457	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.285714
9	131441458	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.214286
9	131441463	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.3125
9	131442233	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.153846
9	131442278	A->G	+	ENSG00000130723	PRRC2B	protein_coding	Intergenic	.	.	Alu	0.181818
9	131690682	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.133333
9	131690770	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.105263
9	131690778	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.105263
9	131690786	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.176471
9	131708893	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.3
9	131708900	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.3
9	131708901	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.5
9	131708902	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.181818
9	131711189	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.166667
9	131711446	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
9	131713688	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.08
9	131713789	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.5
9	131714132	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.25
9	131714805	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.285714
9	131714832	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.5
9	131714948	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.153846
9	131714986	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.214286
9	131715006	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
9	131715672	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.2
9	131725522	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.153846
9	132290665	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.2
9	132339396	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.272727
9	132339401	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.333333
9	132341095	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.2
9	132344282	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.181818
9	132345907	A->G	-	ENSG00000107290	SETX	protein_coding	Intergenic	.	.	Alu	0.181818
9	133415973	A->G	-	ENSG00000148300	REXO4	protein_coding	Intergenic	.	.	Alu	0.166667
9	136421619	A->G	+	ENSG00000165688	PMPCA	protein_coding	Intergenic	.	.	Alu	0.2
9	136458516	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.4
9	136458691	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.117647
9	136458699	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.176471
9	136458714	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.166667
9	136714248	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.0789474
9	136716337	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.5
9	136716372	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.176471
9	136716379	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.5
9	136716448	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.2
9	136716477	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.333333
9	136716503	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.0645161
9	136716515	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.137931
9	136716520	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.111111
9	136716636	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.1875
9	136716653	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.272727
9	136716957	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.333333
9	136716973	A->G	+	ENSG00000165716	FAM69B	protein_coding	Intergenic	.	.	Alu	0.75
9	137617242	A->G	-	ENSG00000203993	ARRDC1-AS1	antisense	Intergenic	.	.	Alu	0.181818
9	137621419	A->G	+	ENSG00000283411	AL590627.2	processed_transcript	Intergenic	.	.	Alu	0.363636
9	137631621	A->G	+	ENSG00000283411	AL590627.2	processed_transcript	Intergenic	.	.	Alu	0.2
9	137632543	A->G	+	ENSG00000283411	AL590627.2	processed_transcript	Intergenic	.	.	Alu	0.4
9	137635340	A->G	+	ENSG00000283411	AL590627.2	processed_transcript	Intergenic	.	.	Alu	0.7
9	137635346	A->G	+	ENSG00000283411	AL590627.2	processed_transcript	Intergenic	.	.	Alu	0.272727
10	100208357	A->G	-	ENSG00000213341	CHUK	protein_coding	Intergenic	.	.	Alu	0.272727
10	100208378	A->G	-	ENSG00000213341	CHUK	protein_coding	Intergenic	.	.	Alu	0.272727
10	100208545	A->G	-	ENSG00000213341	CHUK	protein_coding	Intergenic	.	.	Alu	0.3
10	100250866	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.125
10	100252246	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.428571
10	100253047	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.117647
10	100253088	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.181818
10	100253112	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.25
10	100253131	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.117647
10	100253135	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.166667
10	100253148	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.176471
10	100253152	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.117647
10	100527340	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.230769
10	100527358	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.153846
10	100527368	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.214286
10	100527373	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.214286
10	101004352	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.428571
10	101004456	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.333333
10	101004461	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.266667
10	101004482	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.894737
10	101004488	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.611111
10	101004492	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.105263
10	101004505	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.181818
10	101004518	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.285714
10	101004545	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.26087
10	101004555	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.130435
10	101004598	A->G	+	ENSG00000107816	LZTS2	protein_coding	Intergenic	.	.	Alu	0.09375
10	101788195	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0555556
10	101788266	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0625
10	101788493	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.05
10	101788494	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0487805
10	101788543	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.114286
10	101789233	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.171429
10	101789242	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0689655
10	101789256	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0769231
10	101789264	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.178571
10	101789296	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.136364
10	101789307	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.1
10	101789416	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0392157
10	101789422	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0571429
10	101789456	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0714286
10	101789495	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0545455
10	101789497	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0363636
10	101789762	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0392157
10	101790301	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.117647
10	101790572	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0666667
10	101801128	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101805145	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101806462	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101810841	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0645161
10	101810858	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.15625
10	101810861	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.1
10	101810862	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.129032
10	101810863	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0645161
10	101810885	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101810886	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.32
10	101810887	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101810918	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.282051
10	101810923	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.275
10	101810928	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101810937	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0350877
10	101810941	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0526316
10	101810942	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0909091
10	101810963	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0746269
10	101811168	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0434783
10	101811172	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.431818
10	101811177	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0909091
10	101811186	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.157895
10	101811206	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.566667
10	101811209	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4375
10	101811223	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0571429
10	101811240	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0681818
10	101811241	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.162791
10	101811264	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.591837
10	101811277	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.181818
10	101811289	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.177778
10	101811302	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0869565
10	101811303	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0888889
10	101811482	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.102564
10	101811500	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0869565
10	101811578	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.109091
10	101811591	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0491803
10	101811670	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.649351
10	101811678	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0519481
10	102262014	A->G	+	ENSG00000107862	GBF1	protein_coding	Intergenic	.	.	Alu	0.142857
10	102262068	A->G	+	ENSG00000107862	GBF1	protein_coding	Intergenic	.	.	Alu	0.117647
10	102265624	A->G	+	ENSG00000107862	GBF1	protein_coding	Intergenic	.	.	Alu	0.117647
10	102279981	A->G	+	ENSG00000107862	GBF1	protein_coding	Intergenic	.	.	Alu	0.416667
10	103141301	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103141314	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103141375	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.181818
10	103161293	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.375
10	103161299	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103161301	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.375
10	103161640	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.4
10	103161672	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.25
10	103161688	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.571429
10	103161710	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103163913	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	103163925	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0909091
10	103164073	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1
10	103164123	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.214286
10	103164129	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.769231
10	103164137	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103167674	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103167716	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103167748	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.230769
10	103167796	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103167826	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.133333
10	103167858	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.142857
10	103169495	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.2
10	103169536	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103170223	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.230769
10	103172653	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.416667
10	103172752	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0952381
10	103172939	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0666667
10	103173098	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103173099	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103173100	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103173144	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.1875
10	103177673	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.153846
10	103180506	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	103189351	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	103189414	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	103189482	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.3
10	110113157	A->G	+	ENSG00000148700	ADD3	protein_coding	Intergenic	.	.	Alu	0.583333
10	110593796	A->G	+	ENSG00000108055	SMC3	protein_coding	Intergenic	.	.	Alu	0.125
10	110925494	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.206897
10	110925557	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.419355
10	110925558	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.516129
10	110925570	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.111111
10	110925588	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.142857
10	110925622	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0869565
10	110925647	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0714286
10	110925677	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0571429
10	110925691	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.0666667
10	110925692	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.107143
10	110925693	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.206897
10	110925695	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.1
10	114825118	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.0869565
10	114825119	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.0833333
10	114837014	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.136364
10	114837031	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.133333
10	114837259	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.181818
10	114837260	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.363636
10	114837381	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.466667
10	114839159	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.153846
10	114839167	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.2
10	114839227	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.2
10	114839228	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.363636
10	114839237	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.166667
10	114839307	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.2
10	114839629	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.266667
10	114840127	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.181818
10	114840161	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.166667
10	114842279	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.166667
10	114842345	A->G	+	ENSG00000151553	FAM160B1	protein_coding	Intergenic	.	.	Alu	0.2
10	117361425	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.176471
10	117371938	A->G	-	ENSG00000165650	PDZD8	protein_coding	Intergenic	.	.	Alu	0.2
10	119044807	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.461538
10	119045017	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.363636
10	119045061	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119045148	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.363636
10	119045217	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.153846
10	119052513	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.235294
10	119052611	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.133333
10	119052643	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119053494	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119053701	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.130435
10	119054965	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0952381
10	119054966	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0952381
10	119054975	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.15
10	119054992	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119054993	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.230769
10	119055084	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119055086	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119055163	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.666667
10	119055164	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.25
10	119055172	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.166667
10	119055204	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119063979	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.1
10	119063984	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119064003	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.285714
10	119071861	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.818182
10	119071916	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0869565
10	119071949	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.173913
10	119072521	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.657143
10	119072525	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.393939
10	119072529	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.107143
10	119072545	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.368421
10	119072549	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.105263
10	119072577	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0869565
10	119072590	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.148148
10	119072591	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.148148
10	119072599	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.153846
10	119072633	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0869565
10	119072634	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0909091
10	119072658	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119077368	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.307692
10	119077375	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.25
10	119077693	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.176471
10	119105807	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.5
10	119106100	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.2
10	119106453	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.2
10	119106600	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119106606	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.272727
10	119106618	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119106787	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.208333
10	119106789	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.0833333
10	119106790	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.0833333
10	119106820	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.15
10	119106903	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.384615
10	119106907	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.333333
10	119214637	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.0833333
10	119226678	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.166667
10	119226933	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.166667
10	119227124	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.384615
10	119227125	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.230769
10	119227329	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.2
10	119227405	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.25
10	119227448	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.117647
10	119227456	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.142857
10	119227477	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.4375
10	119227491	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.15
10	119227553	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.15
10	119262594	A->G	+	ENSG00000198873	GRK5	protein_coding	Intergenic	.	.	Alu	0.181818
10	119588455	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.133333
10	119591153	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.285714
10	119591212	A->G	-	ENSG00000151923	TIAL1	protein_coding	Intergenic	.	.	Alu	0.2
10	121889110	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.153846
10	121889111	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.25
10	121889112	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.25
10	121889134	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.153846
10	121906293	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.133333
10	121906310	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.266667
10	121906311	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.133333
10	121906365	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.2
10	121909860	A->G	-	ENSG00000107669	ATE1	protein_coding	Intergenic	.	.	Alu	0.454545
10	122999147	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.115385
10	123002736	A->G	-	ENSG00000095574	IKZF5	protein_coding	Intergenic	.	.	Alu	0.333333
10	124659944	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.4
10	124660020	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.125
10	124660102	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.166667
10	124662619	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.222222
10	124662742	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.133333
10	124662788	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.0833333
10	124777029	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.153846
10	124777113	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.181818
10	124777135	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.153846
10	124777691	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.214286
10	124777692	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.428571
10	124778069	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.2
10	124778082	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.3
10	124783395	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.181818
10	124784814	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.181818
10	124787620	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.466667
10	124787621	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.133333
10	124922752	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.181818
10	124923047	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.454545
10	124923212	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.4
10	124923241	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.142857
10	124923265	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.210526
10	124927945	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.333333
10	124927965	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.133333
10	124927978	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.153846
10	124927994	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.142857
10	124930365	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.2
10	124930366	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.4
10	124930780	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.230769
10	124930883	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.157895
10	124930894	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.214286
10	124930945	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.25
10	124930950	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.181818
10	124931175	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.166667
10	124931176	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.181818
10	124938527	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.166667
10	124938765	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.666667
10	124938807	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.133333
10	124938808	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.266667
10	124940698	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.230769
10	124940737	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.230769
10	124941457	A->G	+	ENSG00000249456	AL731577.2	sense_overlapping	Intergenic	.	.	Alu	0.2
10	124950713	A->G	+	ENSG00000019995	ZRANB1	protein_coding	Intergenic	.	.	Alu	0.416667
10	124962368	A->G	+	ENSG00000019995	ZRANB1	protein_coding	Intergenic	.	.	Alu	0.333333
10	128051907	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.09375
10	128051962	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.230769
10	128051963	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.153846
10	128051980	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.117647
10	128053130	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.166667
10	128053166	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.142857
10	128053900	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.142857
10	128054574	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.1875
10	130148365	A->G	+	ENSG00000108010	GLRX3	protein_coding	Intergenic	.	.	Alu	0.272727
10	130148366	A->G	+	ENSG00000108010	GLRX3	protein_coding	Intergenic	.	.	Alu	0.3
10	131902768	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.25
10	131913103	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0491803
10	131913116	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0588235
10	131914317	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.0952381
10	133265597	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.571429
10	133265602	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.583333
10	133265662	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.105263
10	133294651	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.0769231
10	133294798	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.0645161
10	133296657	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.272727
10	133296658	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.272727
10	133296660	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.181818
10	133296700	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.153846
10	133296701	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.153846
10	133296755	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.266667
10	133296767	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.571429
10	133296771	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.666667
11	102434134	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.444444
11	102434195	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.318182
11	102434376	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.1875
11	102435291	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.15
11	102435317	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.222222
11	102435558	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.111111
11	102435567	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.217391
11	102435621	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.136364
11	102437337	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.25
11	102437375	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.230769
11	102437406	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.2
11	102438185	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.157895
11	102438229	A->G	-	ENSG00000152558	TMEM123	protein_coding	Intergenic	.	.	Alu	0.0833333
11	107415895	A->G	-	ENSG00000152404	CWF19L2	protein_coding	Intergenic	.	.	Alu	0.2
11	108013876	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.2
11	108016097	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.142857
11	108016099	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.142857
11	108016320	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.0909091
11	108016367	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.0909091
11	108016463	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.333333
11	108016468	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.454545
11	108021948	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.2
11	108038632	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.181818
11	108042863	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.181818
11	108043274	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.2
11	108044351	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.454545
11	108044356	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.272727
11	108044998	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.181818
11	108057177	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.133333
11	108057228	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.210526
11	108057237	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.125
11	108057296	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.181818
11	108064466	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.307692
11	108064479	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.166667
11	108064498	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.181818
11	108064521	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.285714
11	108065232	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.571429
11	108069163	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.153846
11	108069169	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.153846
11	108071603	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.230769
11	108079127	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.272727
11	108079135	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.363636
11	108082714	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.1875
11	108096234	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.166667
11	108096235	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.222222
11	108096312	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.230769
11	108097079	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.214286
11	108097082	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.3125
11	108097087	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.1875
11	108097118	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.142857
11	108097130	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.4
11	108097143	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.166667
11	108214128	A->G	-	ENSG00000149308	NPAT	protein_coding	Intergenic	.	.	Alu	0.153846
11	108243158	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.2
11	108243182	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.272727
11	108285212	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.214286
11	110246095	A->G	-	ENSG00000137710	RDX	protein_coding	Intergenic	.	.	Alu	0.181818
11	110246168	A->G	-	ENSG00000137710	RDX	protein_coding	Intergenic	.	.	Alu	0.157895
11	110246177	A->G	-	ENSG00000137710	RDX	protein_coding	Intergenic	.	.	Alu	0.125
11	111751085	A->G	-	ENSG00000137713	PPP2R1B	protein_coding	Intergenic	.	.	Alu	0.181818
11	111858995	A->G	-	ENSG00000086848	ALG9	protein_coding	Intergenic	.	.	Alu	0.428571
11	111859003	A->G	-	ENSG00000086848	ALG9	protein_coding	Intergenic	.	.	Alu	0.333333
11	111859014	A->G	-	ENSG00000086848	ALG9	protein_coding	Intergenic	.	.	Alu	0.25
11	111859380	A->G	-	ENSG00000086848	ALG9	protein_coding	Intergenic	.	.	Alu	0.2
11	111859440	A->G	-	ENSG00000086848	ALG9	protein_coding	Intergenic	.	.	Alu	0.166667
11	116884760	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	116922047	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.909091
11	116922048	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.5
11	116922963	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	116925115	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	116925180	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	116925211	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	116926938	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.176471
11	116926945	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.25
11	117019836	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117028991	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117029122	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	117029135	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117051673	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.142857
11	117051702	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117051711	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117051733	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.230769
11	117054746	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117064893	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.166667
11	117076908	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117076911	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.181818
11	117077040	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.363636
11	117077056	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	117077073	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.15
11	117077104	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.105263
11	117077152	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.384615
11	117085734	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.4
11	117085768	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.454545
11	117085802	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.214286
11	117085873	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.538462
11	117088792	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.125
11	117089307	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.133333
11	117146199	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.333333
11	117146539	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.08
11	117146546	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.0769231
11	117147116	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.266667
11	117148654	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.181818
11	117148985	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.166667
11	117149946	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.0869565
11	117151762	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.4
11	117151764	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.2
11	117152603	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.173913
11	117152818	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.166667
11	117153446	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.333333
11	117153989	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.5
11	117154011	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.642857
11	117154016	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.117647
11	117154053	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.214286
11	117154626	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.105263
11	117154630	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.388889
11	117154706	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.153846
11	117155135	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.0714286
11	117155189	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.136364
11	117155217	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.25
11	117155929	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.166667
11	117155966	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.105263
11	117158251	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.190476
11	117164847	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.153846
11	117164848	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.307692
11	117164872	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.125
11	117164889	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.133333
11	117164915	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.153846
11	117164916	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.583333
11	117166043	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.2
11	117166105	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.157895
11	118373921	A->G	+	ENSG00000110344	UBE4A	protein_coding	Intergenic	.	.	Alu	0.153846
11	118374055	A->G	+	ENSG00000110344	UBE4A	protein_coding	Intergenic	.	.	Alu	0.2
11	118402913	A->G	+	ENSG00000167283	ATP5MG	protein_coding	Intergenic	.	.	Alu	0.142857
11	118402962	A->G	+	ENSG00000167283	ATP5MG	protein_coding	Intergenic	.	.	Alu	0.105263
11	118402968	A->G	+	ENSG00000167283	ATP5MG	protein_coding	Intergenic	.	.	Alu	0.0952381
11	118403300	A->G	+	ENSG00000167283	ATP5MG	protein_coding	Intergenic	.	.	Alu	0.142857
11	118403314	A->G	+	ENSG00000167283	ATP5MG	protein_coding	Intergenic	.	.	Alu	0.25
11	118403593	A->G	+	ENSG00000167283	ATP5MG	protein_coding	Intergenic	.	.	Alu	0.166667
11	118444677	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.208333
11	118444822	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.16129
11	118452353	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.2
11	118456104	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.125
11	118456119	A->G	+	ENSG00000118058	KMT2A	protein_coding	Intergenic	.	.	Alu	0.105263
11	118577347	A->G	+	ENSG00000095139	ARCN1	protein_coding	Intergenic	.	.	Alu	0.166667
11	118753418	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.272727
11	118753484	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.142857
11	118753519	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.142857
11	118754179	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0833333
11	118754303	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.117647
11	118760405	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.473684
11	118760427	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.333333
11	118762189	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0952381
11	118762193	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.136364
11	118766011	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0882353
11	118766024	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0714286
11	118766208	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0666667
11	118766623	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0444444
11	118766670	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0606061
11	118766690	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0952381
11	118766825	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.111111
11	118766858	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0909091
11	118767051	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.153846
11	118775865	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0952381
11	118782717	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.307692
11	118783768	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.230769
11	118783776	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.125
11	118999459	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0769231
11	118999481	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0869565
11	118999509	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.1
11	118999520	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.117647
11	118999522	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.105263
11	118999528	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.227273
11	118999544	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0869565
11	118999558	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0769231
11	118999559	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.111111
11	118999563	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0769231
11	118999584	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.115385
11	118999598	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.133333
11	118999916	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.115385
11	118999942	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.2
11	118999943	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.1
11	118999974	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.266667
11	118999977	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.111111
11	119000039	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0714286
11	119000546	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.133333
11	119000790	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.230769
11	119001847	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0869565
11	119002547	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.285714
11	119002572	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.105263
11	119002599	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.263158
11	119002600	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.315789
11	119002606	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.55
11	119002618	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.25
11	119002805	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.5
11	119002885	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.285714
11	119002886	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.619048
11	119002889	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.181818
11	119002890	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0952381
11	119002903	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.1875
11	119002915	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.428571
11	119002925	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.533333
11	119003472	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0740741
11	119003487	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.238095
11	119003508	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.153846
11	119003509	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119003680	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.111111
11	119003705	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.142857
11	119003713	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0833333
11	119003718	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.08
11	119003719	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.148148
11	119003853	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.153846
11	119004448	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.214286
11	119004450	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.4375
11	119004917	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.117647
11	119004918	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.294118
11	119004939	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.105263
11	119004949	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119004979	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.666667
11	119004980	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.380952
11	119004988	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.1
11	119004998	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.111111
11	119005015	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.217391
11	119005020	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0769231
11	119005042	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0625
11	119005544	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.222222
11	119005557	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.32
11	119005562	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0909091
11	119006156	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.142857
11	119006180	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.214286
11	119006443	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.4
11	119006509	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.3125
11	119006518	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119006630	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.136364
11	119006631	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.318182
11	119006634	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.363636
11	119006643	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.346154
11	119006645	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0714286
11	119007240	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.181818
11	119007381	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.2
11	119007456	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119007509	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0909091
11	119007534	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.151515
11	119007540	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0625
11	119007546	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.121212
11	119007567	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0857143
11	119007575	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0625
11	119007583	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0625
11	119007590	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0857143
11	119007594	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0689655
11	119007602	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.259259
11	119007623	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119007632	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.210526
11	119007647	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.214286
11	119007663	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119007707	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.473684
11	119007722	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0869565
11	119007725	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0869565
11	119007734	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.208333
11	119007749	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.121212
11	119007761	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.128205
11	119009203	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0588235
11	119009229	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0625
11	119009244	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.205882
11	119009252	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.114286
11	119009253	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0857143
11	119009266	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0606061
11	119009324	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.2
11	119009399	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.122449
11	119016166	A->G	-	ENSG00000118181	RPS25	protein_coding	Intergenic	.	.	Alu	0.117647
11	119016755	A->G	-	ENSG00000118181	RPS25	protein_coding	Intergenic	.	.	Alu	0.0740741
11	119022084	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intergenic	.	.	Alu	0.181818
11	119022085	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intergenic	.	.	Alu	0.181818
11	119022381	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intergenic	.	.	Alu	0.538462
11	119022485	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intergenic	.	.	Alu	0.3
11	119022507	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intergenic	.	.	Alu	0.181818
11	119074673	A->G	+	ENSG00000160695	VPS11	protein_coding	Intergenic	.	.	Alu	0.363636
11	121536670	A->G	+	ENSG00000137642	SORL1	protein_coding	Intergenic	.	.	Alu	0.3
11	121536698	A->G	+	ENSG00000137642	SORL1	protein_coding	Intergenic	.	.	Alu	0.2
11	121548786	A->G	+	ENSG00000137642	SORL1	protein_coding	Intergenic	.	.	Alu	0.1
11	122657382	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0909091
11	122657389	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0571429
11	122657401	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0769231
11	122657461	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.153846
11	122657472	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122657498	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122657947	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0869565
11	122658018	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	122663038	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.153846
11	122663077	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.157895
11	122663080	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.1
11	122663191	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.133333
11	122668079	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122668125	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	122670892	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0769231
11	122670897	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0869565
11	122670902	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0909091
11	122670906	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.1
11	122670943	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.176471
11	122671010	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.45
11	122671297	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122671316	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.363636
11	122671324	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.666667
11	122671335	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.583333
11	122671342	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.4375
11	122671347	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122671381	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.1
11	122671385	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0952381
11	122672347	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122672381	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.105263
11	122672394	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0833333
11	122672420	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.5
11	122672455	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.4
11	122672465	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.533333
11	122672467	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122672483	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.5
11	122672523	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	122672526	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.461538
11	122672587	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.214286
11	122676193	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122676220	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.3
11	122676432	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122676440	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	122676473	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122676512	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.125
11	122676630	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.173913
11	122676635	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.291667
11	122676663	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0909091
11	122677696	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.3
11	122677797	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122677803	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.636364
11	122677833	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.157895
11	122677849	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.1
11	122677872	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.235294
11	122677901	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122677911	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.3125
11	122677952	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.136364
11	122677956	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0869565
11	122677971	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.0952381
11	122677974	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.105263
11	122678000	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.227273
11	122678011	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.238095
11	122678012	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.133333
11	122678013	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.133333
11	122678059	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.136364
11	122694449	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.3
11	122694453	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122694457	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	122694558	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	122694559	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	122695973	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.285714
11	122696184	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.133333
11	122699647	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122699683	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122699716	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.142857
11	122700731	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.153846
11	122701996	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.08
11	122704771	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122708973	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122708991	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122709022	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.166667
11	122709037	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122709199	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.2
11	122716495	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.235294
11	122716507	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.25
11	122717986	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.133333
11	122729727	A->G	+	ENSG00000154127	UBASH3B	protein_coding	Intergenic	.	.	Alu	0.181818
11	124757978	A->G	-	ENSG00000149564	ESAM	protein_coding	Intergenic	.	.	Alu	0.5
11	124757980	A->G	-	ENSG00000149564	ESAM	protein_coding	Intergenic	.	.	Alu	0.214286
11	128714892	A->G	+	ENSG00000151702	FLI1	protein_coding	Intergenic	.	.	Alu	0.133333
11	130307235	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.5
11	130307266	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.2
11	130307885	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.3
11	130310857	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.214286
11	130311427	A->G	-	ENSG00000196323	ZBTB44	protein_coding	Intergenic	.	.	Alu	0.181818
11	130871985	A->G	-	.	.	.	Intergenic	.	.	Alu	0.315789
11	130872057	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
12	100094330	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.181818
12	100099816	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.2
12	101791063	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.206897
12	101794116	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.4
12	101794124	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101794392	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.115385
12	101794397	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.24
12	101794404	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101794414	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.166667
12	101794457	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.266667
12	101794483	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.263158
12	101794495	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.136364
12	101794864	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.1
12	101795550	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.133333
12	101801870	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.15
12	101801877	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.105263
12	101804021	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101804131	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.3125
12	101804151	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.214286
12	101804201	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.235294
12	101804207	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.1
12	101805464	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.105263
12	101805623	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.263158
12	101805642	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.1
12	101805645	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.111111
12	101805676	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.333333
12	101812539	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.272727
12	101812563	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.25
12	101812594	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.3
12	101812644	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.333333
12	101812676	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
12	101812737	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.25
12	101812745	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.7
12	101812928	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.5
12	101813032	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.615385
12	101813060	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.142857
12	101813106	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.333333
12	101813748	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.166667
12	101814575	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.153846
12	101814637	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.4
12	101815134	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.105263
12	101815140	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.333333
12	101815150	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.142857
12	101815165	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.25
12	101815512	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.222222
12	101815525	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.764706
12	101815530	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.15
12	101815550	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.428571
12	101815560	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.153846
12	101817383	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.235294
12	101817496	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.117647
12	101823344	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.133333
12	101823345	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101823353	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.1875
12	101823365	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.142857
12	101823422	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101823510	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.272727
12	101823558	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
12	101827508	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.2
12	101827719	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.235294
12	101827720	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.444444
12	101827721	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.111111
12	101827785	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.454545
12	101827802	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
12	101827884	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.133333
12	101827891	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.388889
12	101827904	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.105263
12	101827959	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.235294
12	101829228	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.133333
12	101829319	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.166667
12	101829353	A->G	-	ENSG00000111670	GNPTAB	protein_coding	Intergenic	.	.	Alu	0.181818
12	103968039	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.2
12	103968102	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.333333
12	103968105	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.125
12	103968909	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.133333
12	103968915	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.142857
12	103968942	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.0869565
12	103968964	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.181818
12	103970417	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.125
12	103970662	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.176471
12	103970672	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.190476
12	103971511	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.181818
12	103973197	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.181818
12	103974376	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.181818
12	103974549	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.363636
12	103975731	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.181818
12	103981748	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.181818
12	103985943	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.181818
12	104465960	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0434783
12	104465999	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0425532
12	104466142	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.04
12	104475870	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.208333
12	104487401	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0377358
12	104487451	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0465116
12	104487452	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0425532
12	104488834	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104488835	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.146341
12	104488842	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0714286
12	104488871	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0882353
12	104491608	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.117647
12	104491667	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104491691	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.105263
12	104492272	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0967742
12	104492303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.151515
12	104492770	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104492779	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.222222
12	104492809	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104492822	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.15
12	104492836	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104492912	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104492913	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.444444
12	104492922	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.117647
12	104492935	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104492939	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.2
12	104492953	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.192308
12	104492954	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.208333
12	104493843	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0714286
12	104493923	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.09375
12	104493936	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.242424
12	104494017	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0857143
12	104559564	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.181818
12	104614296	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104615743	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104615848	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104615849	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104615885	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.266667
12	104615915	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.117647
12	104616530	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104616546	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104616566	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.166667
12	104616707	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104616726	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.1
12	104616738	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0952381
12	104616744	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0909091
12	104642425	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.181818
12	104642500	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104642501	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104642583	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.105263
12	104642600	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0952381
12	104642619	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.0833333
12	104642634	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.153846
12	104642668	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.111111
12	104643068	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104643069	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.133333
12	104643074	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.142857
12	104643179	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.125
12	104643303	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.130435
12	105195809	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.333333
12	105195837	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.285714
12	105196508	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.4
12	105196532	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.363636
12	105196614	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.461538
12	105196616	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	106328531	A->G	+	ENSG00000166046	TCP11L2	protein_coding	Intergenic	.	.	Alu	0.266667
12	107699080	A->G	+	ENSG00000136045	PWP1	protein_coding	Intergenic	.	.	Alu	0.3
12	109973074	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.181818
12	109977293	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.181818
12	109985241	A->G	-	ENSG00000139436	GIT2	protein_coding	Intergenic	.	.	Alu	0.272727
12	110001667	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.2
12	110005175	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.764706
12	110005392	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.153846
12	110005393	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.285714
12	110005399	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.357143
12	110005400	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.214286
12	110006858	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.2
12	110009921	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.2
12	110287868	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.2
12	110288318	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.2
12	110294838	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.214286
12	110294894	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.2
12	110328448	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.272727
12	110398413	A->G	-	ENSG00000196510	ANAPC7	protein_coding	Intergenic	.	.	Alu	0.157895
12	110400855	A->G	-	ENSG00000196510	ANAPC7	protein_coding	Intergenic	.	.	Alu	0.117647
12	110400974	A->G	-	ENSG00000196510	ANAPC7	protein_coding	Intergenic	.	.	Alu	0.117647
12	110400990	A->G	-	ENSG00000196510	ANAPC7	protein_coding	Intergenic	.	.	Alu	0.0952381
12	110439150	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.214286
12	110439645	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.454545
12	110439670	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.214286
12	110439712	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.1875
12	110439722	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.1875
12	110441645	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.363636
12	110442127	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.294118
12	110444566	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.0689655
12	110448107	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.117647
12	110448479	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.111111
12	110541375	A->G	-	ENSG00000196850	PPTC7	protein_coding	Intergenic	.	.	Alu	0.166667
12	111426446	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.210526
12	111426461	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.318182
12	111426498	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.115385
12	111426500	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.115385
12	111427166	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	111433637	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.148148
12	111433675	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.117647
12	111433696	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	111438989	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.142857
12	111439090	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.111111
12	111441138	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0909091
12	111595842	A->G	-	ENSG00000204842	ATXN2	protein_coding	Intergenic	.	.	Alu	0.142857
12	111662306	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	111671353	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	111671998	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.272727
12	111675166	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.2
12	111680050	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.166667
12	111680462	A->G	-	ENSG00000089234	BRAP	protein_coding	Intergenic	.	.	Alu	0.153846
12	112018366	A->G	+	ENSG00000089248	ERP29	protein_coding	Intergenic	.	.	Alu	0.4
12	112038074	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.2
12	112038086	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.166667
12	112038119	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.3
12	112069241	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.153846
12	112069261	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.2
12	112069262	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.2
12	112069910	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.2
12	112070669	A->G	-	ENSG00000111300	NAA25	protein_coding	Intergenic	.	.	Alu	0.2
12	112373370	A->G	-	ENSG00000173064	HECTD4	protein_coding	Intergenic	.	.	Alu	0.3
12	112430452	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.307692
12	112430454	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.25
12	112458274	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.2
12	112458778	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.142857
12	112458808	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.181818
12	112458988	A->G	+	ENSG00000179295	PTPN11	protein_coding	Intergenic	.	.	Alu	0.153846
12	113178018	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.454545
12	113178175	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.2
12	113178178	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.2
12	113178615	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.181818
12	113178707	A->G	-	ENSG00000123064	DDX54	protein_coding	Intergenic	.	.	Alu	0.3
12	115996228	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116145777	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116155385	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.181818
12	116155390	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.272727
12	116166184	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.117647
12	116166204	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116179444	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.153846
12	116179447	A->G	-	ENSG00000258337	AC130895.1	sense_intronic	Intergenic	.	.	Alu	0.142857
12	116191487	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116191736	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116191737	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.214286
12	116207273	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116218931	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.2
12	116221211	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0909091
12	116221258	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.0909091
12	116221322	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116230317	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.153846
12	116232975	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.142857
12	116269170	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	116269635	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.133333
12	117182328	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.166667
12	117183454	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.3
12	117183463	A->G	-	ENSG00000135108	FBXO21	protein_coding	Intergenic	.	.	Alu	0.3
12	118137422	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.1875
12	118137429	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.388889
12	118137436	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.5
12	118137444	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.25
12	118137494	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.266667
12	118137518	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.611111
12	118137743	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.166667
12	118137752	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.105263
12	118137827	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.333333
12	118138658	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.307692
12	118335767	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118341798	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.125
12	118341832	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	118341839	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.125
12	118341923	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	118354507	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.1875
12	118356669	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.2
12	118356810	A->G	-	ENSG00000135090	TAOK3	protein_coding	Intergenic	.	.	Alu	0.333333
12	118378581	A->G	+	ENSG00000111707	SUDS3	protein_coding	Intergenic	.	.	Alu	0.5
12	118378582	A->G	+	ENSG00000111707	SUDS3	protein_coding	Intergenic	.	.	Alu	0.615385
12	118378585	A->G	+	ENSG00000111707	SUDS3	protein_coding	Intergenic	.	.	Alu	0.214286
12	118378621	A->G	+	ENSG00000111707	SUDS3	protein_coding	Intergenic	.	.	Alu	0.4375
12	118379074	A->G	+	ENSG00000111707	SUDS3	protein_coding	Intergenic	.	.	Alu	0.416667
12	118385361	A->G	+	ENSG00000111707	SUDS3	protein_coding	Intergenic	.	.	Alu	0.2
12	118389688	A->G	+	ENSG00000111707	SUDS3	protein_coding	Intergenic	.	.	Alu	0.2
12	120001808	A->G	+	ENSG00000135127	BICDL1	protein_coding	Intergenic	.	.	Alu	0.3
12	120112629	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.181818
12	120114161	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.166667
12	120114162	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.666667
12	120114271	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.2
12	120165821	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.333333
12	120165865	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.272727
12	120169091	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.5
12	120169707	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.909091
12	120169708	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.636364
12	120169730	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.4
12	120169739	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.25
12	120170926	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.1875
12	120170975	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.25
12	120780361	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.2
12	120806342	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.3
12	120817037	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.3
12	120817038	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.181818
12	120829563	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.181818
12	120829574	A->G	-	ENSG00000157837	SPPL3	protein_coding	Intergenic	.	.	Alu	0.2
12	121035275	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121035305	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.166667
12	121226016	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.7
12	121314906	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.4
12	121323379	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intergenic	.	.	Alu	0.230769
12	121404275	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.3125
12	121406555	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.5
12	121409081	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.181818
12	121424668	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.181818
12	121639812	A->G	+	ENSG00000276045	ORAI1	protein_coding	Intergenic	.	.	Alu	0.454545
12	121639947	A->G	+	ENSG00000276045	ORAI1	protein_coding	Intergenic	.	.	Alu	0.181818
12	121639951	A->G	+	ENSG00000276045	ORAI1	protein_coding	Intergenic	.	.	Alu	0.2
12	121642831	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	121901088	A->G	+	ENSG00000110801	PSMD9	protein_coding	Intergenic	.	.	Alu	0.181818
12	122210931	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.166667
12	122213164	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.2
12	122215164	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.181818
12	122215167	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.181818
12	122217800	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.384615
12	122217816	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.181818
12	122219600	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.217391
12	122219612	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.0952381
12	122219613	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.0952381
12	122219663	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.166667
12	122223207	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.0952381
12	122223213	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.0909091
12	122223218	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.227273
12	122223371	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.2
12	122223395	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.166667
12	122223831	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.0689655
12	122223893	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.294118
12	122223898	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.230769
12	122223903	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.266667
12	122223908	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.2
12	122223999	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.166667
12	122360487	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.125
12	122414239	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intergenic	.	.	Alu	0.166667
12	122486164	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.4
12	122488123	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.545455
12	122488170	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.230769
12	122488226	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.25
12	122488227	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.176471
12	122488304	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.2
12	122488321	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.181818
12	122488379	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.454545
12	122488407	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.230769
12	122488454	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.181818
12	122488616	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.214286
12	122488659	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.4
12	122488788	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.307692
12	122488808	A->G	-	ENSG00000033030	ZCCHC8	protein_coding	Intergenic	.	.	Alu	0.2
12	122506189	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	122507255	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.190476
12	122507788	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.241379
12	122507800	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0689655
12	122509326	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.105263
12	122511986	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.2
12	122512000	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.1
12	122512079	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0425532
12	122512493	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0416667
12	122512502	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.333333
12	122512574	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.217391
12	122512615	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.25
12	122512670	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.272727
12	122513924	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0322581
12	122513932	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0882353
12	122513937	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.031746
12	122514020	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0526316
12	122514024	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.35
12	122514337	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.142857
12	122514338	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.357143
12	122514361	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.424242
12	122514362	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.424242
12	122514403	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0789474
12	122514447	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.0625
12	122515500	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.09375
12	122869716	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.210526
12	122890429	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.3125
12	122890480	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.172414
12	122890496	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.08
12	123326700	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.2
12	123355761	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.142857
12	123355769	A->G	-	ENSG00000139697	SBNO1	protein_coding	Intergenic	.	.	Alu	0.214286
12	123429649	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.214286
12	123432380	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.2
12	123433517	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.363636
12	123433542	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.2
12	123435551	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	123435617	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.25
12	123435679	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	123463114	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.181818
12	123603822	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.333333
12	123603824	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.2
12	123603903	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.333333
12	123604003	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.4375
12	123604062	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.2
12	123604074	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.3125
12	123604151	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.8
12	123604342	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.181818
12	123625397	A->G	-	ENSG00000111361	EIF2B1	protein_coding	Intergenic	.	.	Alu	0.2
12	123625446	A->G	-	ENSG00000111361	EIF2B1	protein_coding	Intergenic	.	.	Alu	0.363636
12	124552912	A->G	-	ENSG00000196498	NCOR2	protein_coding	Intergenic	.	.	Alu	0.2
12	131728756	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.166667
12	131728929	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.125
12	131728933	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.111111
12	131728963	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.611111
12	131729210	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.157895
12	131729327	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.153846
12	131729328	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.214286
12	131729389	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.115385
12	131729393	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.166667
12	131729423	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.12
12	131729467	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.304348
12	131729474	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.1875
12	131760810	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	131762056	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.133333
12	131762086	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.307692
12	131762611	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.315789
12	131762615	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.133333
12	131762618	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.166667
12	131762705	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.166667
12	131762726	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.181818
12	131762730	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.363636
12	131762740	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.2
12	131899450	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.25
12	131899456	A->G	+	ENSG00000177169	ULK1	protein_coding	Intergenic	.	.	Alu	0.3125
12	131984828	A->G	+	ENSG00000183495	EP400	protein_coding	Intergenic	.	.	Alu	0.181818
12	131997861	A->G	+	ENSG00000183495	EP400	protein_coding	Intergenic	.	.	Alu	0.291667
12	132826198	A->G	+	ENSG00000090615	GOLGA3	protein_coding	Intergenic	.	.	Alu	1
12	132862482	A->G	-	ENSG00000072609	CHFR	protein_coding	Intergenic	.	.	Alu	0.6
12	132863851	A->G	-	ENSG00000072609	CHFR	protein_coding	Intergenic	.	.	Alu	0.3
12	132876012	A->G	-	ENSG00000072609	CHFR	protein_coding	Intergenic	.	.	Alu	0.272727
12	132884033	A->G	-	ENSG00000072609	CHFR	protein_coding	Intergenic	.	.	Alu	0.181818
12	132884060	A->G	-	ENSG00000072609	CHFR	protein_coding	Intergenic	.	.	Alu	0.181818
12	133039277	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.545455
12	133039665	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.642857
12	133039943	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.2
12	133039944	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.4
12	133040116	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.181818
12	133040304	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.25
12	133040329	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.153846
12	133040412	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.142857
13	102653658	A->G	+	ENSG00000134900	TPP2	protein_coding	Intergenic	.	.	Alu	0.0833333
13	110892344	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.363636
13	110895578	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.125
13	110897219	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0454545
13	110897374	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0862069
13	110900008	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0535714
13	112718942	A->G	+	ENSG00000068650	ATP11A	protein_coding	Intergenic	.	.	Alu	0.181818
13	113214538	A->G	+	ENSG00000139842	CUL4A	protein_coding	Intergenic	.	.	Alu	0.75
13	113214629	A->G	+	ENSG00000139842	CUL4A	protein_coding	Intergenic	.	.	Alu	0.416667
13	113222802	A->G	+	ENSG00000139842	CUL4A	protein_coding	Intergenic	.	.	Alu	0.166667
13	113223599	A->G	+	ENSG00000139842	CUL4A	protein_coding	Intergenic	.	.	Alu	0.2
13	113223671	A->G	+	ENSG00000139842	CUL4A	protein_coding	Intergenic	.	.	Alu	0.190476
13	113298894	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.25
13	113298896	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.166667
13	113298931	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.384615
13	113299766	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.214286
13	113302663	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.2
13	113303814	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.2
13	113303818	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.2
13	113303866	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.230769
13	113304879	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.125
13	114284102	A->G	+	ENSG00000169062	UPF3A	protein_coding	Intergenic	.	.	Alu	0.461538
14	101814565	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.15
14	101814594	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.538462
14	101814629	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.09375
14	101814642	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.255814
14	101815987	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.111111
14	101816093	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.363636
14	101816120	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.217391
14	101817027	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.2
14	101817057	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.117647
14	101817087	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.105263
14	101861931	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.105263
14	101861974	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.136364
14	101861976	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.0952381
14	101861982	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.214286
14	101861992	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.111111
14	101862025	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.45
14	101862030	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.263158
14	101862086	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.0869565
14	101862098	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.214286
14	101862151	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.166667
14	101862196	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.153846
14	101862894	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.181818
14	101862899	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.272727
14	101862923	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.363636
14	101863146	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.142857
14	101863147	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.230769
14	101863158	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.166667
14	101863161	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.727273
14	101863193	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.142857
14	101863228	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.2
14	101863737	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.25
14	101863767	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.153846
14	101867296	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.166667
14	101880464	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.5
14	101881363	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.3
14	101996654	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.3
14	102003434	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.363636
14	102031265	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102031347	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.538462
14	102031374	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.384615
14	102031424	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.166667
14	102031437	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.3
14	102031469	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.235294
14	102031470	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.375
14	102031794	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102031795	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.363636
14	102031796	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102031799	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102045517	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.25
14	102045593	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.142857
14	102046838	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.153846
14	102046862	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.285714
14	102046873	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.153846
14	102046878	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.2
14	102047009	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.176471
14	102142555	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.111111
14	102142708	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.166667
14	102143624	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
14	102143625	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
14	102145686	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.166667
14	102148380	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.166667
14	102149924	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
14	102149954	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
14	102150221	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
14	102151548	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
14	102151857	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.176471
14	102151865	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.125
14	102151866	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.125
14	102151869	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.1875
14	102152097	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.266667
14	102152099	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.2
14	102152105	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.133333
14	102159723	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.307692
14	102159766	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.117647
14	102159945	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.2
14	102159958	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.166667
14	102159978	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
14	102159984	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.25
14	102162799	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.181818
14	102162801	A->G	+	ENSG00000140153	WDR20	protein_coding	Intergenic	.	.	Alu	0.3
14	102595233	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102595246	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102595292	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102595346	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102595347	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102601247	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.133333
14	102602451	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.125
14	102602775	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.133333
14	102606227	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102606271	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
14	102607629	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102612059	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102612250	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.272727
14	102612598	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.307692
14	102612899	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.142857
14	102612912	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102641405	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102651850	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102661874	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.153846
14	102661898	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.25
14	102786590	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	102786713	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.142857
14	102786727	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.133333
14	102786775	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.166667
14	102786843	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.103448
14	102786914	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.0625
14	102787902	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.153846
14	102787945	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.4
14	102794304	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.0666667
14	102797842	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.222222
14	102798703	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102800808	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.0833333
14	102800813	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.0909091
14	102801202	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.142857
14	102801221	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.166667
14	102801248	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.117647
14	102801593	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.117647
14	102801604	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.111111
14	102801652	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.166667
14	102801661	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.125
14	102804059	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.125
14	102804564	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	102804587	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.333333
14	102804588	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.0833333
14	102804613	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102812664	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.272727
14	102812665	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.25
14	102816312	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.0909091
14	102820887	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.1875
14	102866589	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	102879441	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102879447	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.3
14	102879498	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.4
14	102879935	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.363636
14	102880822	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.153846
14	102886494	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.142857
14	102886713	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.333333
14	102894776	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.6
14	102894781	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.4
14	102894862	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102894863	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.2
14	102894936	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.222222
14	102894937	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.444444
14	102894954	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.277778
14	103390921	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.181818
14	103410567	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.142857
14	103431195	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.2
14	103431217	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.166667
14	103431225	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.6
14	103432660	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.272727
14	103432669	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.166667
14	103437488	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.357143
14	103437549	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.214286
14	103438760	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.153846
14	103438783	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.153846
14	103438861	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.272727
14	103438867	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.454545
14	103446467	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.363636
14	103447163	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.181818
14	103486396	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.272727
14	103486409	A->G	+	ENSG00000075413	MARK3	protein_coding	Intergenic	.	.	Alu	0.2
14	103659052	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.111111
14	103668741	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.2
14	103681486	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.269231
14	103682109	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.166667
14	103682634	A->G	+	ENSG00000246451	AL049840.1	antisense	Intergenic	.	.	Alu	0.181818
14	103682840	A->G	+	ENSG00000246451	AL049840.1	antisense	Intergenic	.	.	Alu	0.2
14	103682856	A->G	+	ENSG00000246451	AL049840.1	antisense	Intergenic	.	.	Alu	0.0952381
14	103688207	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.222222
14	103688250	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.24
14	103688275	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.176471
14	103688279	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.222222
14	103689960	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.142857
14	103689980	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.103448
14	103689981	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.0714286
14	103690122	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.266667
14	103695209	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.115385
14	105058184	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.4
14	105223000	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.4
14	105223020	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.3
14	105223081	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.2
14	105224113	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.166667
14	105224171	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.142857
14	105224186	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.181818
14	105224200	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.2
14	105224203	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.2
14	105224247	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.545455
14	105224286	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.181818
14	105224347	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.166667
14	105224361	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.5
14	105224617	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.411765
14	105255879	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.272727
14	105259798	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.5
14	105264306	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.181818
14	105265312	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.142857
14	105265331	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.307692
14	105266411	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.214286
14	105266414	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.142857
14	105267528	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.153846
14	105668199	A->G	-	ENSG00000253755	IGHGP	IG_C_pseudogene	Intergenic	.	.	Alu	0.0564784
14	105864670	A->G	-	.	.	.	Intergenic	.	.	Alu	1
14	105865963	A->G	-	.	.	.	Intergenic	.	.	Alu	1
14	105884250	A->G	+	.	.	.	Intergenic	.	.	Alu	1
14	105893583	A->G	+	ENSG00000244620	AC246787.2	lincRNA	Intergenic	.	.	Alu	0.461538
14	105902693	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0759494
15	101230119	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.166667
15	101230121	A->G	-	ENSG00000131873	CHSY1	protein_coding	Intergenic	.	.	Alu	0.25
15	101283359	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.5
15	101283444	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.190476
15	101283454	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.153846
15	101283701	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.0645161
15	101283702	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.137931
15	101284729	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.2
15	101284734	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.181818
MT	1438	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
MT	2706	A->G	+	ENSG00000210082	MT-RNR2	Mt_rRNA	Intron	.	.	Alu	1
MT	750	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
X	131756684	A->G	-	ENSG00000213468	FIRRE	lincRNA	Intron	.	.	Alu	0.102041
X	131794418	A->G	-	ENSG00000213468	FIRRE	lincRNA	Intron	.	.	Alu	0.133333
X	147947549	A->G	+	ENSG00000102081	FMR1	protein_coding	Intron	.	.	Alu	0.2
X	154351370	A->G	-	ENSG00000196924	FLNA	protein_coding	Intron	.	.	Alu	0.0769231
X	2617563	A->G	+	ENSG00000223773	CD99P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.3
X	2715212	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	0.55
X	2715433	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	0.823529
X	2715566	A->G	+	ENSG00000002586	CD99	protein_coding	Intron	.	.	Alu	1
X	304577	A->G	-	ENSG00000178605	GTPBP6	protein_coding	Intron	.	.	Alu	0.310345
X	48940653	A->G	-	ENSG00000279155	AC233300.1	TEC	Intron	.	.	Alu	0.538462
X	71292298	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.111111
X	71292432	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.2
X	71292460	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.181818
X	71292687	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.357143
X	71292854	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.105263
X	74197426	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.166667
X	74197444	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.222222
X	74201960	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.727273
X	74202094	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.235294
X	74278755	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.266667
X	74279160	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.55
X	74279193	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.357143
X	74279194	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.37037
X	74280102	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.173913
X	74280130	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.541667
X	74280143	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.307692
Y	12687916	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.101449
Y	12688775	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.222222
Y	12688801	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.0909091
Y	12688823	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.0645161
Y	12689153	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.111111
Y	12691197	A->G	+	ENSG00000233864	TTTY15	lincRNA	Intron	.	.	Alu	0.166667
Y	7328029	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0869565
Y	7328211	A->G	+	ENSG00000099725	PRKY	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.153846
4	780310	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.117647
4	780327	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.235294
4	780350	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.2
4	780465	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.166667
4	780469	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.166667
16	738290	A->G	-	ENSG00000103245	NARFL	protein_coding	Intron	.	.	Alu	0.157895
18	739393	A->G	-	ENSG00000264635	AP001020.2	sense_intronic	Intron	.	.	Alu	0.2
19	221166	A->G	-	ENSG00000282508	LINC01002	processed_transcript	Intron	.	.	Alu	0.73913
1	1406303	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intron	.	.	Alu	0.0869565
1	1406328	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intron	.	.	Alu	0.105263
1	1484251	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.181818
1	1484310	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.181818
1	1484320	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.8
1	1484455	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.272727
1	1736038	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0833333
1	1736041	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.08
1	1736082	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.133333
3	9701415	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intron	.	.	Alu	0.230769
4	2505885	A->G	+	ENSG00000251229	AL645924.2	processed_pseudogene	Intron	.	.	Alu	0.2
4	2853628	A->G	+	ENSG00000087274	ADD1	protein_coding	Intron	.	.	Alu	0.214286
4	2853643	A->G	+	ENSG00000087274	ADD1	protein_coding	Intron	.	.	Alu	0.176471
4	2853660	A->G	+	ENSG00000087274	ADD1	protein_coding	Intron	.	.	Alu	0.166667
4	2853683	A->G	+	ENSG00000087274	ADD1	protein_coding	Intron	.	.	Alu	0.133333
4	2853684	A->G	+	ENSG00000087274	ADD1	protein_coding	Intron	.	.	Alu	0.142857
11	6714143	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.727273
11	6714155	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.363636
11	9171780	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intron	.	.	Alu	0.0689655
12	6586970	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intron	.	.	Alu	0.214286
12	6586971	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intron	.	.	Alu	0.214286
12	6944199	A->G	+	ENSG00000111678	C12orf57	protein_coding	Intron	.	.	Alu	1
12	7111103	A->G	+	ENSG00000205885	C1RL-AS1	antisense	Intron	.	.	Alu	0.769231
12	7923199	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.0555556
12	7923202	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.0555556
12	7923267	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.117647
12	7929567	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.0952381
12	7929589	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.111111
12	7932951	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	1
12	9648777	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intron	.	.	Alu	0.635417
12	9658610	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.333333
12	9659666	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.194444
12	9659679	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.625
12	9659685	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.125
16	1361175	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intron	.	.	Alu	0.3
16	1361176	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intron	.	.	Alu	0.5
16	1361179	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intron	.	.	Alu	0.3
16	1361203	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intron	.	.	Alu	0.3
16	1361221	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intron	.	.	Alu	0.538462
17	2039323	A->G	+	ENSG00000108963	DPH1	protein_coding	Intron	.	.	Alu	0.2
17	2039335	A->G	+	ENSG00000108963	DPH1	protein_coding	Intron	.	.	Alu	0.333333
17	2039651	A->G	+	ENSG00000108963	DPH1	protein_coding	Intron	.	.	Alu	0.3
18	9115671	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.115385
18	9115673	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.166667
18	9115681	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.105263
18	9115701	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.1
18	9115764	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.352941
18	9115779	A->G	+	ENSG00000263847	AP005899.1	antisense	Intron	.	.	Alu	0.1875
19	2328078	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intron	.	.	Alu	0.266667
19	2328187	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intron	.	.	Alu	0.363636
19	2328218	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intron	.	.	Alu	0.181818
19	2338233	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intron	.	.	Alu	0.235294
1	11018451	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intron	.	.	Alu	0.2
1	16461066	A->G	+	ENSG00000226029	LINC01772	lincRNA	Intron	.	.	Alu	0.25
1	16624385	A->G	-	ENSG00000215908	CROCCP2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.461538
1	22059644	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intron	.	.	Alu	0.117647
1	23975231	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intron	.	.	Alu	0.992063
1	28580210	A->G	-	ENSG00000197989	SNHG12	antisense	Intron	.	.	Alu	0.142857
1	28580222	A->G	-	ENSG00000197989	SNHG12	antisense	Intron	.	.	Alu	0.142857
1	29172456	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.102564
1	29172459	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0540541
1	29172460	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0526316
1	29172495	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.111111
1	29172559	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0392157
1	29172564	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0588235
1	29172565	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.0588235
1	31263446	A->G	-	ENSG00000229447	AC114495.2	processed_pseudogene	Intron	.	.	Alu	0.1875
1	31263460	A->G	-	ENSG00000229447	AC114495.2	processed_pseudogene	Intron	.	.	Alu	0.111111
1	31933064	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.3
1	31933104	A->G	-	ENSG00000228634	AL136115.1	lincRNA	Intron	.	.	Alu	0.2
1	32652390	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intron	.	.	Alu	0.105263
1	32652423	A->G	+	ENSG00000162521	RBBP4	protein_coding	Intron	.	.	Alu	0.125
1	32781468	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.222222
1	32781497	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.176471
1	32781498	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.2
1	32781501	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.5
1	44776864	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.0666667
1	44776866	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.1
1	44776867	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.0666667
1	44776889	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.111111
1	44777171	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.0689655
1	44777189	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.172414
1	45609929	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.142857
1	45609989	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.142857
1	45609992	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.285714
1	45610795	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.230769
1	45610809	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.153846
1	45610820	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.2
1	45610861	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.181818
1	45610957	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.133333
1	45610970	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.277778
1	45611734	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.2
1	45655861	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.148148
1	45655924	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.047619
1	45655971	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.142857
1	45656022	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.0909091
1	45656023	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.09375
1	45656030	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.0606061
1	45658764	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.15625
1	45658766	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.15625
1	45658901	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.105263
1	51458492	A->G	-	ENSG00000085832	EPS15	protein_coding	Intron	.	.	Alu	0.263158
1	51458493	A->G	-	ENSG00000085832	EPS15	protein_coding	Intron	.	.	Alu	0.210526
1	51458625	A->G	-	ENSG00000085832	EPS15	protein_coding	Intron	.	.	Alu	0.0833333
1	51458654	A->G	-	ENSG00000085832	EPS15	protein_coding	Intron	.	.	Alu	0.0769231
1	51458655	A->G	-	ENSG00000085832	EPS15	protein_coding	Intron	.	.	Alu	0.0869565
1	51458685	A->G	-	ENSG00000085832	EPS15	protein_coding	Intron	.	.	Alu	0.111111
1	77677083	A->G	-	ENSG00000036549	AC118549.1	protein_coding	Intron	.	.	Alu	0.105263
1	93337942	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intron	.	.	Alu	0.0769231
2	47163705	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intron	.	.	Alu	0.181818
2	61502527	A->G	-	ENSG00000082898	XPO1	protein_coding	Intron	.	.	Alu	0.181818
2	61502536	A->G	-	ENSG00000082898	XPO1	protein_coding	Intron	.	.	Alu	0.166667
2	86561655	A->G	-	ENSG00000115561	CHMP3	protein_coding	Intron	.	.	Alu	0.5
2	86562235	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.352941
2	86614028	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.263158
2	86614060	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.318182
2	86614061	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.181818
2	86614066	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.391304
2	86614067	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.304348
2	86614083	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.08
2	86614487	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.4
2	86614540	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.133333
2	95906674	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	Intron	.	.	Alu	0.323529
3	10023061	A->G	-	ENSG00000186162	CIDECP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.3
3	12589955	A->G	-	ENSG00000132155	RAF1	protein_coding	Intron	.	.	Alu	0.3
3	14944905	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0555556
3	25734154	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intron	.	.	Alu	0.666667
3	25734171	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intron	.	.	Alu	0.230769
3	25734181	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intron	.	.	Alu	0.166667
3	25734635	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intron	.	.	Alu	0.7
3	25734668	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intron	.	.	Alu	0.583333
3	25734698	A->G	-	ENSG00000151092	NGLY1	protein_coding	Intron	.	.	Alu	0.636364
3	39408924	A->G	+	ENSG00000168028	RPSA	protein_coding	Intron	.	.	Alu	0.0769231
3	47701552	A->G	-	ENSG00000173473	SMARCC1	protein_coding	Intron	.	.	Alu	0.190476
3	48699398	A->G	-	ENSG00000068745	IP6K2	protein_coding	Intron	.	.	Alu	0.2
3	49318692	A->G	-	ENSG00000114316	USP4	protein_coding	Intron	.	.	Alu	0.3
3	49373322	A->G	-	ENSG00000067560	RHOA	protein_coding	Intron	.	.	Alu	0.103448
3	49373325	A->G	-	ENSG00000067560	RHOA	protein_coding	Intron	.	.	Alu	0.133333
3	49811654	A->G	-	ENSG00000182179	UBA7	protein_coding	Intron	.	.	Alu	0.136364
3	50094236	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.105263
3	50094237	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.238095
3	50112872	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.15
3	50112949	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.361111
3	50112955	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0512821
3	50112973	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0512821
3	50113034	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0392157
3	50113054	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.2
3	50113122	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0576923
3	58431523	A->G	-	ENSG00000168291	PDHB	protein_coding	Intron	.	.	Alu	0.153846
3	63902183	A->G	+	ENSG00000285399	AC104162.2	bidirectional_promoter_lncRNA	Intron	.	.	Alu	0.133333
4	24530343	A->G	-	ENSG00000109606	DHX15	protein_coding	Intron	.	.	Alu	0.142857
4	39908770	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intron	.	.	Alu	0.142857
4	40209629	A->G	+	ENSG00000168421	RHOH	protein_coding	Intron	.	.	Alu	0.0740741
4	82877517	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intron	.	.	Alu	0.2
4	98886607	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intron	.	.	Alu	0.333333
4	98886632	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intron	.	.	Alu	0.166667
5	16616264	A->G	-	ENSG00000246214	AC022113.1	antisense	Intron	.	.	Alu	1
5	34175891	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.315789
5	38969863	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intron	.	.	Alu	0.2
5	56927963	A->G	-	ENSG00000271828	AC008937.3	antisense	Intron	.	.	Alu	0.461538
5	56928353	A->G	-	ENSG00000271828	AC008937.3	antisense	Intron	.	.	Alu	0.3
5	95513328	A->G	-	ENSG00000198677	TTC37	protein_coding	Intron	.	.	Alu	0.0909091
6	24706768	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intron	.	.	Alu	0.428571
6	24706903	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intron	.	.	Alu	0.230769
6	28977560	A->G	+	ENSG00000263426	RN7SL471P	misc_RNA	Intron	.	.	Alu	0.12766
6	29943115	A->G	+	ENSG00000206503	HLA-A	protein_coding	Intron	.	.	Alu	0.531722
6	30261457	A->G	+	ENSG00000270604	HCG17	lincRNA	Intron	.	.	Alu	1
6	32663657	A->G	-	ENSG00000179344	HLA-DQB1	protein_coding	Intron	.	.	Alu	1
6	32664495	A->G	-	ENSG00000179344	HLA-DQB1	protein_coding	Intron	.	.	Alu	0.947368
6	42882120	A->G	+	ENSG00000146223	RPL7L1	protein_coding	Intron	.	.	Alu	0.3
6	42940416	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.105263
6	42940436	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.166667
6	42940462	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.08
6	42941586	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.142857
7	48106573	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.4375
7	48106586	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.3125
7	65975522	A->G	-	ENSG00000169919	GUSB	protein_coding	Intron	.	.	Alu	0.6
7	65975611	A->G	-	ENSG00000169919	GUSB	protein_coding	Intron	.	.	Alu	0.125
7	65975612	A->G	-	ENSG00000169919	GUSB	protein_coding	Intron	.	.	Alu	0.428571
7	65975622	A->G	-	ENSG00000169919	GUSB	protein_coding	Intron	.	.	Alu	0.285714
7	65975657	A->G	-	ENSG00000169919	GUSB	protein_coding	Intron	.	.	Alu	0.692308
7	65975658	A->G	-	ENSG00000169919	GUSB	protein_coding	Intron	.	.	Alu	0.166667
7	65975812	A->G	-	ENSG00000169919	GUSB	protein_coding	Intron	.	.	Alu	0.5
7	65975813	A->G	-	ENSG00000169919	GUSB	protein_coding	Intron	.	.	Alu	0.125
7	72829753	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.985915
7	72999529	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.72
7	84939766	A->G	-	ENSG00000280325	AC074183.2	TEC	Intron	.	.	Alu	1
7	87186335	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.173913
7	87186340	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.0909091
7	87186341	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.142857
7	87186367	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.0909091
7	87186449	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.3125
7	87186454	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.611111
7	87186458	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.166667
7	87186471	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.3
7	87186496	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.130435
7	87187256	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.384615
7	87187270	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.133333
7	87187287	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.1875
7	87187347	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.181818
7	87187350	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.0952381
7	87187352	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.555556
7	87187451	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.130435
7	92092672	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.181818
7	92092686	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.2
7	92092903	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.470588
7	92092912	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.235294
7	92092913	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.166667
7	92092925	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.3
8	23189310	A->G	-	ENSG00000253930	TNFRSF10A-AS1	antisense	Intron	.	.	Alu	0.172414
8	25450602	A->G	-	ENSG00000104756	KCTD9	protein_coding	Intron	.	.	Alu	0.2
8	38241973	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intron	.	.	Alu	0.846154
8	38241974	A->G	+	ENSG00000085788	DDHD2	protein_coding	Intron	.	.	Alu	0.642857
8	55893812	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.0740741
8	55893893	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.142857
8	55893924	A->G	+	ENSG00000254325	AC018607.1	sense_intronic	Intron	.	.	Alu	0.12
8	67045407	A->G	-	ENSG00000121022	COPS5	protein_coding	Intron	.	.	Alu	0.166667
8	67045445	A->G	-	ENSG00000121022	COPS5	protein_coding	Intron	.	.	Alu	0.153846
9	15505132	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.125
9	15505134	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.0869565
9	15505187	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.0952381
9	34201344	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.153846
9	34201398	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.125
9	34201465	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.272727
9	34201476	A->G	+	ENSG00000279336	AL353662.3	pseudogene	Intron	.	.	Alu	0.461538
9	40992722	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.163265
9	40993414	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.133333
9	40993428	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.125
9	41007311	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
9	41008967	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.384615
9	41011651	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.229167
9	62809968	A->G	+	ENSG00000238113	LINC01410	lincRNA	Intron	.	.	Alu	0.217391
9	98116065	A->G	-	ENSG00000274011	RF00017	misc_RNA	Intron	.	.	Alu	0.181818
9	98116077	A->G	-	ENSG00000274011	RF00017	misc_RNA	Intron	.	.	Alu	0.3
10	28523253	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.25
10	28523714	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0588235
10	28523752	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0666667
10	42516154	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.105263
10	42517873	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.3
10	42518025	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.142857
10	42518049	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.666667
10	42518071	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.266667
10	42518072	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.357143
10	42518688	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.416667
10	42518700	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.384615
10	45650142	A->G	-	ENSG00000172671	ZFAND4	protein_coding	Intron	.	.	Alu	0.538462
10	45650161	A->G	-	ENSG00000172671	ZFAND4	protein_coding	Intron	.	.	Alu	0.615385
10	45650229	A->G	-	ENSG00000172671	ZFAND4	protein_coding	Intron	.	.	Alu	0.111111
10	45650253	A->G	-	ENSG00000172671	ZFAND4	protein_coding	Intron	.	.	Alu	0.272727
10	45650254	A->G	-	ENSG00000172671	ZFAND4	protein_coding	Intron	.	.	Alu	0.5
10	45650281	A->G	-	ENSG00000172671	ZFAND4	protein_coding	Intron	.	.	Alu	0.708333
10	45650285	A->G	-	ENSG00000172671	ZFAND4	protein_coding	Intron	.	.	Alu	0.0769231
10	68759395	A->G	+	ENSG00000221184	MIR1254-1	miRNA	Intron	.	.	Alu	0.2
10	68759400	A->G	+	ENSG00000221184	MIR1254-1	miRNA	Intron	.	.	Alu	0.2
10	79785844	A->G	-	ENSG00000225484	NUTM2B-AS1	antisense	Intron	.	.	Alu	0.166667
11	17332974	A->G	+	ENSG00000070081	NUCB2	protein_coding	Intron	.	.	Alu	0.111111
11	18507876	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intron	.	.	Alu	0.1875
11	44606365	A->G	+	ENSG00000255092	AC010768.2	antisense	Intron	.	.	Alu	0.105263
11	61427181	A->G	-	ENSG00000279632	AP003108.4	TEC	Intron	.	.	Alu	0.181818
11	65347858	A->G	+	ENSG00000133884	DPF2	protein_coding	Intron	.	.	Alu	0.142857
11	65347862	A->G	+	ENSG00000133884	DPF2	protein_coding	Intron	.	.	Alu	0.285714
11	65348079	A->G	+	ENSG00000133884	DPF2	protein_coding	Intron	.	.	Alu	0.166667
11	65348089	A->G	+	ENSG00000133884	DPF2	protein_coding	Intron	.	.	Alu	0.214286
11	65348095	A->G	+	ENSG00000133884	DPF2	protein_coding	Intron	.	.	Alu	0.2
11	65348103	A->G	+	ENSG00000133884	DPF2	protein_coding	Intron	.	.	Alu	0.285714
11	65348181	A->G	+	ENSG00000133884	DPF2	protein_coding	Intron	.	.	Alu	0.166667
11	65439476	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0238095
11	65441344	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0491803
11	65441417	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0392157
11	65441945	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0652174
11	65442590	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0545455
11	65442591	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.115385
11	65442619	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.657143
11	65442627	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.294118
11	65442670	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.152174
11	65442679	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0888889
11	65442701	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.372093
11	65442702	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.047619
11	65442703	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.139535
11	66270064	A->G	+	ENSG00000174903	RAB1B	protein_coding	Intron	.	.	Alu	0.153846
11	66271613	A->G	+	ENSG00000174903	RAB1B	protein_coding	Intron	.	.	Alu	0.25
11	66271623	A->G	+	ENSG00000174903	RAB1B	protein_coding	Intron	.	.	Alu	0.2
11	66666779	A->G	+	ENSG00000173914	RBM4B	protein_coding	Intron	.	.	Alu	0.419355
11	90212878	A->G	-	ENSG00000110172	CHORDC1	protein_coding	Intron	.	.	Alu	0.115385
11	90212894	A->G	-	ENSG00000110172	CHORDC1	protein_coding	Intron	.	.	Alu	0.0540541
11	90212902	A->G	-	ENSG00000110172	CHORDC1	protein_coding	Intron	.	.	Alu	0.108696
11	93735049	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.047619
11	93800769	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.166667
11	93800820	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.818182
11	93806104	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.1875
11	93806118	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.272727
11	93806145	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.125
11	93806159	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.384615
11	93806162	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.153846
11	93806247	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.153846
11	93807293	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.125
12	11826539	A->G	+	ENSG00000139083	ETV6	protein_coding	Intron	.	.	Alu	0.75
12	53296676	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.0833333
12	53297204	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.363636
12	53297226	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.4
12	53297361	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.166667
12	55792617	A->G	-	ENSG00000205323	SARNP	protein_coding	Intron	.	.	Alu	0.181818
12	55943302	A->G	+	ENSG00000065357	DGKA	protein_coding	Intron	.	.	Alu	0.210526
12	55943369	A->G	+	ENSG00000065357	DGKA	protein_coding	Intron	.	.	Alu	0.166667
12	68649116	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.0869565
12	68649117	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.36
12	68649118	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.111111
12	68649120	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.206897
12	68649172	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.08
12	68649184	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.4
12	68649210	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.26087
12	68649248	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.3125
12	68649281	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.136364
12	68649322	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.0714286
12	68649857	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.3
12	68649858	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.2
12	68649893	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.153846
12	68649966	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.142857
12	68649993	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.105263
12	69255041	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intron	.	.	Alu	0.818182
12	69255048	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intron	.	.	Alu	0.217391
12	69255069	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intron	.	.	Alu	0.15
12	70322135	A->G	+	ENSG00000279530	AC092881.1	TEC	Intron	.	.	Alu	0.3125
12	98597589	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.025
12	98597590	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.0481928
12	98597633	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.025
12	98597653	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.021978
13	30367640	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.2
13	32524825	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.333333
13	32524847	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.125
13	32524891	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.32
13	32524901	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.0769231
13	32525013	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.368421
13	32525553	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.464286
13	32525569	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.269231
13	40912631	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.1875
13	40912633	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.235294
13	45351928	A->G	+	ENSG00000170919	TPT1-AS1	processed_transcript	Intron	.	.	Alu	0.181818
13	52022132	A->G	+	ENSG00000253710	ALG11	protein_coding	Intron	.	.	Alu	0.2
13	64003361	A->G	-	ENSG00000227674	LINC00355	lincRNA	Intron	.	.	Alu	0.285714
13	64003391	A->G	-	ENSG00000227674	LINC00355	lincRNA	Intron	.	.	Alu	0.133333
14	20449703	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.15
14	20449713	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.166667
14	20449719	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.1875
14	20449733	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.352941
14	20449891	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.0869565
14	20451341	A->G	-	ENSG00000258515	AL355075.2	antisense	Intron	.	.	Alu	0.0833333
14	20451354	A->G	-	ENSG00000258515	AL355075.2	antisense	Intron	.	.	Alu	0.294118
14	20451389	A->G	-	ENSG00000258515	AL355075.2	antisense	Intron	.	.	Alu	0.333333
14	20451403	A->G	-	ENSG00000258515	AL355075.2	antisense	Intron	.	.	Alu	0.166667
14	30598160	A->G	+	ENSG00000092140	G2E3	protein_coding	Intron	.	.	Alu	0.1
14	30598165	A->G	+	ENSG00000092140	G2E3	protein_coding	Intron	.	.	Alu	0.1
14	30611732	A->G	+	ENSG00000092140	G2E3	protein_coding	Intron	.	.	Alu	0.285714
14	30611736	A->G	+	ENSG00000092140	G2E3	protein_coding	Intron	.	.	Alu	0.142857
14	30611737	A->G	+	ENSG00000092140	G2E3	protein_coding	Intron	.	.	Alu	0.142857
14	45206425	A->G	-	ENSG00000129534	MIS18BP1	protein_coding	Intron	.	.	Alu	0.214286
14	50482665	A->G	-	ENSG00000012983	MAP4K5	protein_coding	Intron	.	.	Alu	0.133333
14	50482725	A->G	-	ENSG00000012983	MAP4K5	protein_coding	Intron	.	.	Alu	0.285714
14	50482730	A->G	-	ENSG00000012983	MAP4K5	protein_coding	Intron	.	.	Alu	0.2
14	55060382	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intron	.	.	Alu	0.466667
14	58267138	A->G	-	ENSG00000258682	AL132989.1	sense_overlapping	Intron	.	.	Alu	0.05
14	58293823	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0519481
14	58293880	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.075
14	58293915	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.133333
14	58293922	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0491803
14	58293945	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.037037
14	58293969	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0784314
14	58294014	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.297872
14	58294015	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.217391
14	58294023	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0434783
14	58295331	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0645161
14	58295578	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0350877
14	58295723	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0757576
14	58295741	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0307692
14	58295789	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0246914
14	67593272	A->G	-	ENSG00000100564	PIGH	protein_coding	Intron	.	.	Alu	0.391304
14	67593273	A->G	-	ENSG00000100564	PIGH	protein_coding	Intron	.	.	Alu	0.304348
14	73916749	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intron	.	.	Alu	0.294118
14	90766955	A->G	+	ENSG00000213315	AL122020.1	processed_pseudogene	Intron	.	.	Alu	1
14	91288737	A->G	-	ENSG00000015133	CCDC88C	protein_coding	Intron	.	.	Alu	0.0869565
14	91288740	A->G	-	ENSG00000015133	CCDC88C	protein_coding	Intron	.	.	Alu	0.32
14	91288782	A->G	-	ENSG00000015133	CCDC88C	protein_coding	Intron	.	.	Alu	0.130435
14	91288875	A->G	-	ENSG00000015133	CCDC88C	protein_coding	Intron	.	.	Alu	0.181818
15	24982618	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.758621
15	24982621	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.5
15	24982669	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.416667
15	24982690	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.136364
15	24982691	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.391304
15	24982702	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.115385
15	24982707	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.148148
15	24982729	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.75
15	24982731	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.125
15	24982792	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.454545
15	24982795	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.666667
15	24982804	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.181818
15	24983245	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.421053
15	24983271	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.133333
15	24983272	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.133333
15	24983278	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.117647
15	24983514	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.142857
15	24983703	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.384615
15	24983708	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.384615
15	24983709	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.333333
15	24985444	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.107143
15	24985466	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.0857143
15	24985469	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.21875
15	24985575	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.0512821
15	24985588	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.0571429
15	25357518	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intron	.	.	Alu	0.176471
15	25357525	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intron	.	.	Alu	0.153846
15	25357541	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intron	.	.	Alu	0.153846
15	30488264	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.166667
15	30488286	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.235294
15	32522729	A->G	-	ENSG00000223509	AC135983.2	transcribed_processed_pseudogene	Intron	.	.	Alu	0.230769
15	40694169	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intron	.	.	Alu	0.153846
15	41298841	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0555556
15	41298845	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0555556
15	44470551	A->G	+	ENSG00000137770	CTDSPL2	protein_coding	Intron	.	.	Alu	0.0909091
15	50363599	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.461538
15	50363607	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.125
15	50363619	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.133333
15	50363659	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.142857
15	50365754	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.181818
15	50743159	A->G	-	ENSG00000279665	AC012100.3	TEC	Intron	.	.	Alu	0.25
15	50743195	A->G	-	ENSG00000279665	AC012100.3	TEC	Intron	.	.	Alu	0.6
15	60528194	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intron	.	.	Alu	0.0512821
15	60528283	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intron	.	.	Alu	0.0434783
15	74026214	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.142857
15	74026431	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.0740741
15	74026432	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.222222
15	74026725	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.1875
15	74026832	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.133333
15	74027387	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.117647
15	74027392	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.25
15	74027453	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.333333
15	74466044	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.25
15	74466081	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.181818
15	74466088	A->G	+	ENSG00000247240	UBL7-AS1	antisense	Intron	.	.	Alu	0.25
15	74573811	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intron	.	.	Alu	0.166667
15	74573846	A->G	+	ENSG00000179361	ARID3B	protein_coding	Intron	.	.	Alu	0.230769
15	76942686	A->G	+	ENSG00000117906	RCN2	protein_coding	Intron	.	.	Alu	0.166667
15	78890672	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.404762
15	83024143	A->G	-	ENSG00000259767	AC022558.1	sense_intronic	Intron	.	.	Alu	0.181818
15	83024150	A->G	-	ENSG00000259767	AC022558.1	sense_intronic	Intron	.	.	Alu	0.166667
15	84569805	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.727273
15	84569831	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.444444
15	84569874	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0952381
15	84569882	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.15
15	84570037	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
15	84570038	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
15	84570049	A->G	-	ENSG00000189136	UBE2Q2P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
15	89093713	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intron	.	.	Alu	0.230769
15	89094225	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intron	.	.	Alu	0.272727
16	11895177	A->G	-	ENSG00000263307	AC007216.4	antisense	Intron	.	.	Alu	0.272727
16	11904126	A->G	-	ENSG00000260318	COX6CP1	processed_pseudogene	Intron	.	.	Alu	0.107143
16	15684329	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intron	.	.	Alu	0.2
16	15684331	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intron	.	.	Alu	0.181818
16	15684428	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intron	.	.	Alu	0.230769
16	15684472	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intron	.	.	Alu	0.3
16	15684473	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intron	.	.	Alu	0.3
16	15684482	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intron	.	.	Alu	0.333333
16	15684499	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intron	.	.	Alu	0.153846
16	15684502	A->G	+	ENSG00000262380	AC026401.2	sense_intronic	Intron	.	.	Alu	0.153846
16	18878437	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.2
16	18878442	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.3
16	18878557	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.363636
16	18879248	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.4
16	18879254	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.4
16	18879382	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.181818
16	18879387	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.25
16	18879388	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.166667
16	18879406	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.181818
16	18879422	A->G	-	ENSG00000157106	SMG1	protein_coding	Intron	.	.	Alu	0.3
16	21520173	A->G	-	ENSG00000258186	SLC7A5P2	transcribed_processed_pseudogene	Intron	.	.	Alu	0.774194
16	22329032	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.4375
16	22329036	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.142857
16	23566640	A->G	+	ENSG00000103353	UBFD1	protein_coding	Intron	.	.	Alu	0.2
16	28956653	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intron	.	.	Alu	0.583333
16	28956654	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intron	.	.	Alu	0.333333
16	29834400	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.333333
16	29834402	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.32
16	30380276	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.333333
16	30380354	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.266667
16	30380426	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.8
16	30380430	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.75
16	30380574	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.6
16	31122518	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.585366
16	31122589	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.1875
16	31123802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.0833333
16	31182742	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.212121
16	31182816	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.0444444
16	31182817	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.2
16	31183267	A->G	+	ENSG00000089280	FUS	protein_coding	Intron	.	.	Alu	0.103448
16	47590354	A->G	+	ENSG00000102893	PHKB	protein_coding	Intron	.	.	Alu	0.272727
16	47590355	A->G	+	ENSG00000102893	PHKB	protein_coding	Intron	.	.	Alu	0.272727
16	70234177	A->G	-	ENSG00000261556	SMG1P7	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
16	71751318	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intron	.	.	Alu	0.2
16	71924426	A->G	+	ENSG00000182149	IST1	protein_coding	Intron	.	.	Alu	0.037037
16	71924431	A->G	+	ENSG00000182149	IST1	protein_coding	Intron	.	.	Alu	0.0363636
16	88627113	A->G	+	ENSG00000158545	ZC3H18	protein_coding	Intron	.	.	Alu	0.181818
16	88627253	A->G	+	ENSG00000158545	ZC3H18	protein_coding	Intron	.	.	Alu	0.3
16	88717948	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.133333
16	88717971	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.8125
16	88717983	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.2
16	88718000	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.533333
16	88718001	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.2
16	88718007	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.714286
16	88718039	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.214286
16	88718985	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.166667
16	88718996	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.4
16	88719124	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.0882353
16	89520631	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.166667
16	89531451	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.578947
16	89531474	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.125
16	89531491	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.352941
16	89531583	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.136364
16	89531594	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.0833333
16	89531608	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.347826
16	89531609	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.478261
16	89548310	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.583333
17	15530858	A->G	-	ENSG00000266538	AC005838.2	lincRNA	Intron	.	.	Alu	0.166667
17	16057123	A->G	-	ENSG00000141027	NCOR1	protein_coding	Intron	.	.	Alu	0.25
17	28609267	A->G	-	ENSG00000265287	AC005726.5	antisense	Intron	.	.	Alu	0.230769
17	28672744	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intron	.	.	Alu	0.785714
17	28945090	A->G	-	ENSG00000265908	AC024267.5	antisense	Intron	.	.	Alu	0.181818
17	29403766	A->G	+	ENSG00000160551	TAOK1	protein_coding	Intron	.	.	Alu	0.181818
17	30738203	A->G	+	ENSG00000280069	AC127024.8	TEC	Intron	.	.	Alu	0.25
17	30809805	A->G	-	ENSG00000176390	CRLF3	protein_coding	Intron	.	.	Alu	0.181818
17	32036078	A->G	+	ENSG00000185158	LRRC37B	protein_coding	Intron	.	.	Alu	0.166667
17	32476890	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intron	.	.	Alu	0.0952381
17	36581901	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intron	.	.	Alu	0.133333
17	36581952	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intron	.	.	Alu	0.111111
17	36581971	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intron	.	.	Alu	0.117647
17	36582004	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intron	.	.	Alu	0.142857
17	36582062	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intron	.	.	Alu	0.133333
17	36582113	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intron	.	.	Alu	0.307692
17	36582114	A->G	+	ENSG00000278311	GGNBP2	protein_coding	Intron	.	.	Alu	0.461538
17	41851173	A->G	-	ENSG00000259623	AC125257.1	sense_overlapping	Intron	.	.	Alu	0.0289855
17	41851192	A->G	-	ENSG00000259623	AC125257.1	sense_overlapping	Intron	.	.	Alu	0.025974
17	41851347	A->G	-	ENSG00000259623	AC125257.1	sense_overlapping	Intron	.	.	Alu	0.0588235
17	41851360	A->G	-	ENSG00000259623	AC125257.1	sense_overlapping	Intron	.	.	Alu	0.0434783
17	41851419	A->G	-	ENSG00000259623	AC125257.1	sense_overlapping	Intron	.	.	Alu	0.0740741
17	45508500	A->G	-	ENSG00000214425	LRRC37A4P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0810811
17	45508511	A->G	-	ENSG00000214425	LRRC37A4P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0789474
17	46156842	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.105263
17	46156847	A->G	-	ENSG00000120071	KANSL1	protein_coding	Intron	.	.	Alu	0.111111
17	47673788	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intron	.	.	Alu	0.173913
17	47673795	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intron	.	.	Alu	0.565217
17	47673803	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intron	.	.	Alu	0.478261
17	47673804	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intron	.	.	Alu	0.608696
17	50723719	A->G	+	ENSG00000278963	AC005921.3	TEC	Intron	.	.	Alu	0.230769
17	51031134	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intron	.	.	Alu	0.133333
17	51031209	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intron	.	.	Alu	0.142857
17	58278902	A->G	-	ENSG00000005381	MPO	protein_coding	Intron	.	.	Alu	0.615385
17	62004962	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.0952381
17	62005059	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.272727
17	62005401	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.153846
17	62005433	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.363636
17	62005458	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.16
17	62005465	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.0833333
17	62005505	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.272727
17	62005537	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.52381
17	62005543	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.142857
17	62005600	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.285714
17	62007052	A->G	-	ENSG00000279133	AC018628.1	TEC	Intron	.	.	Alu	0.142857
17	64487351	A->G	-	ENSG00000256525	POLG2	protein_coding	Intron	.	.	Alu	0.0952381
17	64487357	A->G	-	ENSG00000256525	POLG2	protein_coding	Intron	.	.	Alu	0.166667
17	64487422	A->G	-	ENSG00000256525	POLG2	protein_coding	Intron	.	.	Alu	0.166667
17	64783069	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.235294
17	64783132	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
17	64783158	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.230769
17	64783161	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
17	64783240	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.470588
17	67176592	A->G	-	ENSG00000198265	HELZ	protein_coding	Intron	.	.	Alu	0.307692
17	67176610	A->G	-	ENSG00000198265	HELZ	protein_coding	Intron	.	.	Alu	0.181818
17	67355364	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.09375
17	67355386	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intron	.	.	Alu	0.0769231
17	74204846	A->G	+	ENSG00000172809	RPL38	protein_coding	Intron	.	.	Alu	0.133333
17	74204874	A->G	+	ENSG00000172809	RPL38	protein_coding	Intron	.	.	Alu	0.117647
17	74205763	A->G	+	ENSG00000172809	RPL38	protein_coding	Intron	.	.	Alu	0.166667
17	76559825	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.133333
17	76559929	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.133333
17	78108952	A->G	-	ENSG00000204282	TNRC6C-AS1	processed_transcript	Intron	.	.	Alu	0.166667
17	81879884	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.181818
17	81879893	A->G	-	ENSG00000263731	AC145207.5	lincRNA	Intron	.	.	Alu	0.181818
17	82265317	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.2
17	82265378	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.1
17	82265382	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.105263
17	82272126	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intron	.	.	Alu	0.2
17	82625952	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intron	.	.	Alu	0.25
18	11905231	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intron	.	.	Alu	0.8
18	11905245	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intron	.	.	Alu	0.153846
18	12341877	A->G	-	ENSG00000141385	AFG3L2	protein_coding	Intron	.	.	Alu	0.0689655
18	12973152	A->G	+	ENSG00000085415	SEH1L	protein_coding	Intron	.	.	Alu	0.2
18	49390780	A->G	-	ENSG00000141627	DYM	protein_coding	Intron	.	.	Alu	0.333333
18	49390794	A->G	-	ENSG00000141627	DYM	protein_coding	Intron	.	.	Alu	0.3125
18	63396345	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.3125
18	63396350	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.0869565
18	63396358	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.0769231
18	63396391	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.409091
18	63396399	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.111111
18	63396423	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.166667
18	63396426	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.08
18	63396470	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.136364
18	63396509	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.681818
18	63396809	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.2
18	63396826	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.166667
18	63396907	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.125
18	63396946	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.142857
19	11850130	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.153846
19	11850254	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.307692
19	11850271	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.111111
19	11850294	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.227273
19	11850869	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.0833333
19	11850878	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.08
19	11851020	A->G	+	ENSG00000171291	ZNF439	protein_coding	Intron	.	.	Alu	0.107143
19	12003621	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.0952381
19	13836464	A->G	-	ENSG00000207808	MIR27A	miRNA	Intron	.	.	Alu	0.176471
19	16079774	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.216216
19	16079780	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0555556
19	16079829	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.08
19	16079857	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0666667
19	16079882	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0416667
19	16079949	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0263158
19	16079976	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0769231
19	16100565	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.181818
19	16565967	A->G	-	ENSG00000269085	AC008764.5	antisense	Intron	.	.	Alu	0.25
19	16565970	A->G	-	ENSG00000269085	AC008764.5	antisense	Intron	.	.	Alu	0.166667
19	16634683	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.272727
19	16636388	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.157895
19	16640338	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.294118
19	16640339	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.176471
19	17177563	A->G	+	ENSG00000269836	AC020913.3	antisense	Intron	.	.	Alu	0.2
19	19796154	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.181818
19	19796194	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.272727
19	19796204	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.2
19	19820439	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.1
19	19820506	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.352941
19	23257614	A->G	-	ENSG00000269837	IPO5P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.166667
19	24066636	A->G	+	ENSG00000268362	AC092279.1	lincRNA	Intron	.	.	Alu	0.166667
19	24066660	A->G	+	ENSG00000268362	AC092279.1	lincRNA	Intron	.	.	Alu	0.142857
19	35275111	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.15625
19	35275116	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.0606061
19	35275124	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.0645161
19	35275164	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.227273
19	35275208	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.421053
19	35275212	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.2
19	35275256	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.230769
19	35275281	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.352941
19	37324963	A->G	+	ENSG00000181666	HKR1	protein_coding	Intron	.	.	Alu	0.4
19	38894329	A->G	-	ENSG00000068903	SIRT2	protein_coding	Intron	.	.	Alu	0.3
19	41551277	A->G	+	ENSG00000268027	AC243960.1	lincRNA	Intron	.	.	Alu	0.133333
19	46736163	A->G	-	ENSG00000090372	STRN4	protein_coding	Intron	.	.	Alu	0.3
19	48256603	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.153846
19	49804181	A->G	+	ENSG00000196961	AP2A1	protein_coding	Intron	.	.	Alu	0.181818
19	52618624	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intron	.	.	Alu	0.4
19	52927674	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.5
19	52927693	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.25
19	52927699	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.266667
19	52928037	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0606061
19	52928056	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0689655
19	52928097	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.125
19	52928173	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.0952381
19	52928182	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.190476
19	52928243	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.25
19	52928269	A->G	-	ENSG00000213801	ZNF321P	transcribed_processed_pseudogene	Intron	.	.	Alu	0.230769
19	57304529	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.1
19	57304784	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.125
19	57304831	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.153846
19	57304919	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.666667
19	57304929	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.333333
19	57304985	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.181818
19	57305556	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.545455
19	57305583	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.111111
19	57305599	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.105263
19	57305637	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.692308
19	57305645	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.142857
19	57305648	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.571429
19	57853842	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intron	.	.	Alu	0.153846
19	57853856	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intron	.	.	Alu	0.230769
19	58349123	A->G	+	ENSG00000121410	A1BG	protein_coding	Intron	.	.	Alu	0.166667
20	45422651	A->G	+	ENSG00000124155	PIGT	protein_coding	Intron	.	.	Alu	0.2
20	49943935	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.333333
20	49943990	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.125
20	49943991	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.235294
20	49944138	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.142857
20	49944162	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.136364
20	49944169	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.0869565
20	49944181	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.0769231
20	49944186	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.0869565
20	49944198	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.142857
20	49944254	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.2
20	49944304	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.0689655
20	49944321	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.103448
20	49944612	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.25
20	49944652	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.0869565
20	49944656	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.0952381
20	49944802	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.363636
20	50914115	A->G	-	ENSG00000228663	PSMD10P1	processed_pseudogene	Intron	.	.	Alu	0.075
20	62278676	A->G	+	ENSG00000130703	OSBPL2	protein_coding	Intron	.	.	Alu	0.235294
21	33906975	A->G	-	ENSG00000241837	ATP5PO	protein_coding	Intron	.	.	Alu	0.166667
21	41427980	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.181818
21	41428035	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.357143
21	41428045	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.428571
21	41428051	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.352941
21	41428106	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.2
21	41428108	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.2
21	46267673	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intron	.	.	Alu	0.133333
21	46267719	A->G	-	ENSG00000160294	MCM3AP	protein_coding	Intron	.	.	Alu	0.142857
22	19450944	A->G	-	ENSG00000070010	UFD1	protein_coding	Intron	.	.	Alu	0.214286
22	19452767	A->G	-	ENSG00000070010	UFD1	protein_coding	Intron	.	.	Alu	0.103448
22	37871214	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intron	.	.	Alu	0.285714
22	37871218	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intron	.	.	Alu	0.227273
22	39079810	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.2
22	39079821	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.181818
22	41176068	A->G	+	ENSG00000232754	AL035658.1	antisense	Intron	.	.	Alu	0.0487805
22	49806069	A->G	-	ENSG00000279345	Z98885.3	antisense	Intron	.	.	Alu	0.0588235
22	49806075	A->G	-	ENSG00000279345	Z98885.3	antisense	Intron	.	.	Alu	0.0967742
22	49806083	A->G	-	ENSG00000279345	Z98885.3	antisense	Intron	.	.	Alu	0.115385
22	49806086	A->G	-	ENSG00000279345	Z98885.3	antisense	Intron	.	.	Alu	0.0666667
22	49806150	A->G	-	ENSG00000279345	Z98885.3	antisense	Intron	.	.	Alu	0.0769231
1	112699117	A->G	+	ENSG00000155363	MOV10	protein_coding	Intron	.	.	Alu	0.1875
1	121571348	A->G	+	ENSG00000231752	EMBP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	1
1	149848016	A->G	-	ENSG00000261716	AC239868.1	sense_overlapping	Intron	.	.	Alu	0.5
1	149848017	A->G	-	ENSG00000261716	AC239868.1	sense_overlapping	Intron	.	.	Alu	0.3
1	150961394	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intron	.	.	Alu	0.230769
1	150961396	A->G	-	ENSG00000143379	SETDB1	protein_coding	Intron	.	.	Alu	0.571429
1	155670870	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.2
1	167459766	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intron	.	.	Alu	0.263158
1	167459774	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intron	.	.	Alu	0.529412
1	167459776	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intron	.	.	Alu	0.210526
1	167640624	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0425532
1	167640629	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0408163
1	167640643	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.0377358
1	167640689	A->G	+	ENSG00000198771	RCSD1	protein_coding	Intron	.	.	Alu	0.028169
1	171511543	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intron	.	.	Alu	0.32
1	174015947	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intron	.	.	Alu	0.1
1	174016009	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intron	.	.	Alu	0.2
1	179868980	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.0434783
1	179869117	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.125
1	179874590	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.1875
1	179874646	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.0952381
1	179874654	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.0952381
1	179874663	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.111111
1	179874668	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.1
1	179874757	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.263158
1	179875111	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	Intron	.	.	Alu	0.25
1	182877940	A->G	+	ENSG00000135829	DHX9	protein_coding	Intron	.	.	Alu	0.461538
1	201962486	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intron	.	.	Alu	0.181818
1	201962531	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intron	.	.	Alu	0.181818
1	203814916	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intron	.	.	Alu	0.105263
1	207768991	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.608696
1	207768998	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.2
1	207769004	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.2
1	207769040	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.125
1	207769980	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.545455
1	207770040	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.137931
1	224413185	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.294118
1	225864904	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intron	.	.	Alu	0.166667
1	225865009	A->G	-	ENSG00000196187	TMEM63A	protein_coding	Intron	.	.	Alu	0.153846
1	235160176	A->G	-	ENSG00000188739	RBM34	protein_coding	Intron	.	.	Alu	0.0588235
1	235160200	A->G	-	ENSG00000188739	RBM34	protein_coding	Intron	.	.	Alu	0.117647
2	178433678	A->G	+	ENSG00000223960	AC009948.1	antisense	Intron	.	.	Alu	0.130435
2	178433740	A->G	+	ENSG00000223960	AC009948.1	antisense	Intron	.	.	Alu	0.0689655
2	178445807	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.125
2	178445816	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.307692
2	178445823	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.5
2	178445868	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.235294
2	190924712	A->G	+	ENSG00000115419	GLS	protein_coding	Intron	.	.	Alu	0.117647
2	207109988	A->G	-	ENSG00000253008	MIR2355	miRNA	Intron	.	.	Alu	0.3
2	218233041	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.115385
2	218233042	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.16
2	218233259	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.1
2	218233278	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.166667
2	218233298	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.235294
2	218233303	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.1
2	218233310	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0869565
2	218233893	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0625
2	218233907	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.08
2	218233926	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0571429
2	218234046	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0819672
2	218234049	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0701754
2	218234058	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0555556
2	218234075	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0681818
2	218235204	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0333333
2	218235234	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0392157
2	218235236	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0408163
2	218235275	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0735294
2	218235276	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.176471
2	218235279	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.227273
2	218235293	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.396825
2	218235305	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.114754
2	218235316	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0675676
2	218235334	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.131148
2	218235364	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.162162
2	218235369	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.04
2	218235420	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.116883
2	218235426	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.309859
2	218235437	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.056338
2	218235450	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.189189
2	218235484	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0243902
2	218235816	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.09375
2	218235826	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.12069
2	218235832	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0333333
2	218235838	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0307692
2	218235855	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.272727
2	218235856	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.25
2	218235861	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.125
2	218235866	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0322581
2	218235874	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0350877
2	218235907	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0350877
2	218235928	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0425532
2	218235936	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0566038
2	218235940	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0408163
2	218235943	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.3125
2	218235951	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0408163
2	218235969	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0357143
2	218235970	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.172414
2	218235993	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0434783
2	218236011	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0833333
2	218236022	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.101695
2	218236065	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.145161
2	218236549	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.025
2	218236559	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.08
2	218236573	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0847458
2	218236600	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.04
2	218236607	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0638298
2	218236609	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.102041
2	218236617	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.147059
2	218236628	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0909091
2	218236645	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.173913
2	218236649	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.115385
2	218236671	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.117647
2	218236685	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.190476
2	218236694	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0540541
2	218236704	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.047619
2	218236713	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.1
2	218398898	A->G	+	ENSG00000273361	AC021016.3	antisense	Intron	.	.	Alu	0.454545
2	218573993	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intron	.	.	Alu	0.125
2	233141186	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intron	.	.	Alu	0.15
2	238186977	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intron	.	.	Alu	0.0526316
3	160412660	A->G	+	ENSG00000248710	AC079594.2	protein_coding	Intron	.	.	Alu	0.115385
3	160412680	A->G	+	ENSG00000248710	AC079594.2	protein_coding	Intron	.	.	Alu	0.1
3	183522898	A->G	-	ENSG00000172578	KLHL6	protein_coding	Intron	.	.	Alu	0.125
3	196400493	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.111111
3	196905000	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.142857
3	196905017	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.0909091
3	196905166	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.153846
3	196912776	A->G	+	ENSG00000230732	AC016949.1	sense_intronic	Intron	.	.	Alu	0.0645161
3	196913901	A->G	+	ENSG00000230732	AC016949.1	sense_intronic	Intron	.	.	Alu	0.272727
4	102811447	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.153846
4	102811494	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0833333
4	102811559	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0666667
4	102811619	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0869565
4	102811664	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0731707
4	102811668	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0638298
4	102812171	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.150943
4	102812234	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.0512821
4	108623148	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.181818
4	108623238	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.142857
4	127943470	A->G	-	ENSG00000164073	MFSD8	protein_coding	Intron	.	.	Alu	0.2
4	151103269	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.344828
4	151103354	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0444444
4	151103371	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0434783
4	151103669	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0547945
5	115838832	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.3
5	115838871	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.3
5	115838956	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.333333
5	115839001	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.230769
5	115839006	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.153846
5	115839040	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.125
5	115839041	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.133333
5	139364997	A->G	+	ENSG00000272742	AC135457.1	antisense	Intron	.	.	Alu	0.0689655
5	139365010	A->G	+	ENSG00000272742	AC135457.1	antisense	Intron	.	.	Alu	0.0740741
5	180835080	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.9
5	181313887	A->G	+	ENSG00000238035	AC138035.1	lincRNA	Intron	.	.	Alu	0.8
6	138951075	A->G	-	ENSG00000135597	REPS1	protein_coding	Intron	.	.	Alu	0.2
6	138951144	A->G	-	ENSG00000135597	REPS1	protein_coding	Intron	.	.	Alu	0.357143
6	138951149	A->G	-	ENSG00000135597	REPS1	protein_coding	Intron	.	.	Alu	0.2
7	100355962	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.2
7	100356053	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.153846
7	100356089	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.142857
7	105104644	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.2
7	105104650	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.142857
7	105542260	A->G	+	ENSG00000135249	RINT1	protein_coding	Intron	.	.	Alu	0.181818
7	105542264	A->G	+	ENSG00000135249	RINT1	protein_coding	Intron	.	.	Alu	0.25
7	105542284	A->G	+	ENSG00000135249	RINT1	protein_coding	Intron	.	.	Alu	0.181818
7	116888616	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intron	.	.	Alu	0.2
7	128528676	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.5
7	128528980	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.2
7	128529029	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.230769
7	128529042	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.153846
7	128529072	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.153846
7	128529139	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.230769
7	128653234	A->G	+	ENSG00000230715	AC018638.2	processed_pseudogene	Intron	.	.	Alu	0.108108
7	128653235	A->G	+	ENSG00000230715	AC018638.2	processed_pseudogene	Intron	.	.	Alu	0.157895
7	128654076	A->G	+	ENSG00000243679	AC018638.5	processed_pseudogene	Intron	.	.	Alu	0.2
7	128654132	A->G	+	ENSG00000243679	AC018638.5	processed_pseudogene	Intron	.	.	Alu	0.210526
7	130928442	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.1875
7	130928484	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.294118
7	130928490	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.263158
7	130928519	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.111111
7	130944865	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.340909
7	130944866	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.113636
7	130944867	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.272727
7	130945233	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.192308
7	130945478	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.595238
7	130959874	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.0869565
7	130959940	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.0967742
7	140460152	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intron	.	.	Alu	0.25
7	140460164	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intron	.	.	Alu	0.166667
7	140460187	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intron	.	.	Alu	0.454545
7	141746441	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intron	.	.	Alu	0.0625
7	141746454	A->G	+	ENSG00000106028	SSBP1	protein_coding	Intron	.	.	Alu	0.0588235
7	143298539	A->G	+	ENSG00000240322	RN7SL481P	misc_RNA	Intron	.	.	Alu	0.352941
7	157381022	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intron	.	.	Alu	0.125
8	108227262	A->G	-	ENSG00000253754	AC087620.1	antisense	Intron	.	.	Alu	0.266667
8	123348068	A->G	-	ENSG00000207704	MIR548AA1	miRNA	Intron	.	.	Alu	0.5
8	129948988	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intron	.	.	Alu	0.153846
8	129948989	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intron	.	.	Alu	0.153846
8	129949034	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intron	.	.	Alu	0.333333
8	129949036	A->G	-	ENSG00000253720	AC022973.2	lincRNA	Intron	.	.	Alu	0.133333
9	128331990	A->G	+	ENSG00000167113	COQ4	protein_coding	Intron	.	.	Alu	0.2
9	128331991	A->G	+	ENSG00000167113	COQ4	protein_coding	Intron	.	.	Alu	0.3
9	129503384	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.117647
9	129505994	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.125
9	130699738	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intron	.	.	Alu	0.1
9	130699746	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intron	.	.	Alu	0.157895
9	130699768	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intron	.	.	Alu	0.25
9	131725407	A->G	-	ENSG00000240853	RN7SL328P	misc_RNA	Intron	.	.	Alu	0.25
9	136420079	A->G	+	ENSG00000165688	PMPCA	protein_coding	Intron	.	.	Alu	0.181818
9	136420097	A->G	+	ENSG00000165688	PMPCA	protein_coding	Intron	.	.	Alu	0.181818
9	136420551	A->G	+	ENSG00000165688	PMPCA	protein_coding	Intron	.	.	Alu	0.133333
10	101787815	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0410959
10	101787819	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0344828
10	101787824	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0581395
10	101787829	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0365854
10	101787859	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.025974
10	101787887	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0338983
10	103169429	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intron	.	.	Alu	0.333333
10	110907394	A->G	+	ENSG00000214413	BBIP1	protein_coding	Intron	.	.	Alu	0.181818
10	112450166	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0444444
10	119105416	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intron	.	.	Alu	0.181818
10	121967282	A->G	-	ENSG00000273891	AL731566.1	antisense	Intron	.	.	Alu	0.153846
10	133295365	A->G	-	ENSG00000235245	AL360181.2	antisense	Intron	.	.	Alu	0.166667
11	117159868	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intron	.	.	Alu	0.0869565
11	117209732	A->G	-	ENSG00000280143	AP000892.3	TEC	Intron	.	.	Alu	0.0952381
11	117209768	A->G	-	ENSG00000280143	AP000892.3	TEC	Intron	.	.	Alu	0.307692
11	117209775	A->G	-	ENSG00000280143	AP000892.3	TEC	Intron	.	.	Alu	0.142857
11	117210786	A->G	-	ENSG00000160613	PCSK7	protein_coding	Intron	.	.	Alu	0.153846
11	117210813	A->G	-	ENSG00000160613	PCSK7	protein_coding	Intron	.	.	Alu	0.181818
11	117210834	A->G	-	ENSG00000160613	PCSK7	protein_coding	Intron	.	.	Alu	0.2
11	117210835	A->G	-	ENSG00000160613	PCSK7	protein_coding	Intron	.	.	Alu	0.6
11	119003758	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.0909091
11	119003819	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.125
11	119003821	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.375
11	119004507	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.176471
11	119004508	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.352941
11	119004520	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.117647
11	119004622	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.333333
11	119004624	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.272727
11	119004646	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.294118
11	119004726	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.388889
11	119004804	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.142857
11	119004805	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.375
11	119004827	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.25
11	119004833	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.1
11	119004858	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.105263
11	119004873	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.1
11	119004875	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.157895
11	119004877	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.473684
11	119009868	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.115385
11	119009874	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.16
11	119009890	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.454545
11	119009891	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.454545
11	119009913	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.125
11	119009917	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.125
11	119009931	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.105263
11	119010086	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.285714
11	119010095	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.214286
11	119010099	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.142857
11	119010114	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.3125
11	119010129	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.428571
11	119010136	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.136364
11	119010152	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.0909091
11	119023179	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intron	.	.	Alu	0.214286
11	124757239	A->G	-	ENSG00000149564	ESAM	protein_coding	Intron	.	.	Alu	0.230769
11	124757246	A->G	-	ENSG00000149564	ESAM	protein_coding	Intron	.	.	Alu	0.166667
11	125610802	A->G	+	ENSG00000134910	STT3A	protein_coding	Intron	.	.	Alu	0.357143
11	125610815	A->G	+	ENSG00000134910	STT3A	protein_coding	Intron	.	.	Alu	0.153846
11	125610832	A->G	+	ENSG00000134910	STT3A	protein_coding	Intron	.	.	Alu	0.166667
11	126209070	A->G	-	ENSG00000165526	RPUSD4	protein_coding	Intron	.	.	Alu	0.2
12	110387207	A->G	-	ENSG00000196510	ANAPC7	protein_coding	Intron	.	.	Alu	0.25
12	120574910	A->G	+	ENSG00000022840	RNF10	protein_coding	Intron	.	.	Alu	0.133333
12	121213622	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.2
12	121213628	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.4
12	121331888	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.166667
12	121331910	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.105263
12	121331914	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.105263
12	121331976	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.411765
12	121332037	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.3
12	121332965	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.461538
12	121332975	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.416667
12	121334016	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.5
12	121334017	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.363636
12	121334031	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.3
12	121334032	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.181818
12	121334046	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.2
12	121334134	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.7
12	121334139	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.181818
12	121334159	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.133333
12	121334161	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.333333
12	121334223	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.2
12	121334265	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.8
12	121334272	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.153846
12	121334273	A->G	-	ENSG00000089053	ANAPC5	protein_coding	Intron	.	.	Alu	0.307692
12	121642323	A->G	+	ENSG00000276045	ORAI1	protein_coding	Intron	.	.	Alu	0.0338983
12	122217262	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.12
12	122217320	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.227273
12	122217321	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.217391
12	122217393	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.2
12	122217415	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.363636
12	122217772	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.2
12	122221541	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.473684
12	122221563	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.115385
12	122221597	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.111111
12	122221601	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.0689655
12	122221624	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.619048
12	122221635	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.25
12	122221641	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.55
12	122221670	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.105263
12	122222413	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.615385
12	122224853	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.0444444
12	122342613	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intron	.	.	Alu	0.5
12	122344000	A->G	-	ENSG00000130779	CLIP1	protein_coding	Intron	.	.	Alu	0.3
12	122507181	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.8125
12	122507231	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.166667
12	122507938	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.1
12	122508000	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.12
12	122508031	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.0952381
12	122508053	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.111111
12	122870565	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.166667
12	122870569	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.363636
12	122870704	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.117647
12	122875321	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.1
12	122875348	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.166667
12	122875356	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.133333
12	122876612	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.0952381
12	122876649	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.0714286
12	122878096	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.153846
12	122880580	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.08
12	122880613	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.0606061
12	122886408	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.0952381
12	122886568	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.307692
12	123458989	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.0952381
12	123459035	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.0952381
12	123459039	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.142857
12	123605285	A->G	+	ENSG00000111364	DDX55	protein_coding	Intron	.	.	Alu	0.181818
12	123605297	A->G	+	ENSG00000111364	DDX55	protein_coding	Intron	.	.	Alu	0.133333
12	128814254	A->G	-	ENSG00000279500	AC108704.2	TEC	Intron	.	.	Alu	0.25
12	132755299	A->G	-	ENSG00000176915	ANKLE2	protein_coding	Intron	.	.	Alu	0.2
12	132755300	A->G	-	ENSG00000176915	ANKLE2	protein_coding	Intron	.	.	Alu	0.125
12	132756831	A->G	-	ENSG00000176915	ANKLE2	protein_coding	Intron	.	.	Alu	0.181818
12	132758314	A->G	-	ENSG00000176915	ANKLE2	protein_coding	Intron	.	.	Alu	0.166667
12	132758377	A->G	-	ENSG00000176915	ANKLE2	protein_coding	Intron	.	.	Alu	0.15
12	132758389	A->G	-	ENSG00000176915	ANKLE2	protein_coding	Intron	.	.	Alu	0.142857
12	132759205	A->G	-	ENSG00000176915	ANKLE2	protein_coding	Intron	.	.	Alu	1
12	132865925	A->G	-	ENSG00000278949	AC127070.4	TEC	Intron	.	.	Alu	0.181818
12	133040458	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intron	.	.	Alu	0.181818
13	114287380	A->G	+	ENSG00000169062	UPF3A	protein_coding	Intron	.	.	Alu	0.0625
13	114287430	A->G	+	ENSG00000169062	UPF3A	protein_coding	Intron	.	.	Alu	0.0444444
14	101818374	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intron	.	.	Alu	0.1875
14	102023702	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intron	.	.	Alu	0.3
14	102038144	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.15
14	102038145	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.130435
14	102038214	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.105263
14	102038231	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.3
14	102038241	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.157895
14	102038253	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.1
14	102045041	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.210526
14	102045048	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.166667
14	102045088	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.0952381
14	102045176	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.08
14	102045182	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.185185
14	102045183	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.111111
14	105668389	A->G	-	ENSG00000253755	IGHGP	IG_C_pseudogene	Intron	.	.	Alu	1
14	105668401	A->G	-	ENSG00000253755	IGHGP	IG_C_pseudogene	Intron	.	.	Alu	0.921053
15	101288358	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intron	.	.	Alu	0.142857
X	110174105	A->G	+	ENSG00000157600	TMEM164	protein_coding	three_prime_utr	.	.	Alu	0.189189
X	119538613	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	119539374	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	123909128	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.307692
X	123909129	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	123909231	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	123912440	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123912470	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.08
X	123912587	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123913419	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	154475944	A->G	+	ENSG00000130827	PLXNA3	protein_coding	three_prime_utr	.	.	Alu	0.2
X	154475959	A->G	+	ENSG00000130827	PLXNA3	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	154476007	A->G	+	ENSG00000130827	PLXNA3	protein_coding	three_prime_utr	.	.	Alu	0.25
X	154476025	A->G	+	ENSG00000130827	PLXNA3	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16763629	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	16763635	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.444444
X	2220405	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.4
X	2220406	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.4
X	23703590	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.3
X	24212951	A->G	+	ENSG00000005889	ZFX	protein_coding	three_prime_utr	.	.	Alu	0.08
X	2487001	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.619048
X	2906853	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	299722	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	299734	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	300879	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.235294
X	301213	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	301317	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	301886	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	302007	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	1
X	46603595	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	46603777	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	46603820	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	46604602	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	46604603	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	46604604	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	46605951	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	46605971	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.047619
X	46606033	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	46606043	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.16
X	46606073	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.08
X	46606092	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	46606117	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.277778
X	46606133	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.25
X	71465202	A->G	+	ENSG00000147133	TAF1	protein_coding	three_prime_utr	.	.	Alu	0.233333
X	77827456	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	77827620	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.025641
X	77827691	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
X	77828348	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
X	77828563	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0757576
4	670494	A->G	+	ENSG00000133256	PDE6B	protein_coding	three_prime_utr	.	.	Alu	0.1
6	407708	A->G	+	ENSG00000137265	IRF4	protein_coding	three_prime_utr	.	.	Alu	0.1
9	380856	A->G	+	ENSG00000107099	DOCK8	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	769322	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
11	769386	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
18	909811	A->G	+	ENSG00000141433	ADCYAP1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	1405321	A->G	-	ENSG00000242485	MRPL20	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	1405334	A->G	-	ENSG00000242485	MRPL20	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	1635543	A->G	-	ENSG00000248333	CDK11B	protein_coding	three_prime_utr	.	.	Alu	1
1	1663038	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.6
1	1663539	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	1663595	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	1664061	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.15
1	1664126	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	1730938	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.166667
1	1731108	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.833333
1	1731660	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.2
1	1731713	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.153846
1	1731742	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.2
1	1732121	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.133333
1	1732131	A->G	-	ENSG00000227775	AL031282.1	transcribed_processed_pseudogene	three_prime_utr	.	.	Alu	0.181818
1	6522116	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	6522285	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	6523455	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	9836107	A->G	+	ENSG00000214021	TTLL3	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	1386787	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	1386797	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	1386835	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	2499406	A->G	+	ENSG00000063978	RNF4	protein_coding	three_prime_utr	.	.	Alu	0.3
4	2839268	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
4	2839375	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.08
4	2839588	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2839593	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.818182
4	2839669	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.2
4	2839694	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	2839707	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.3
4	2839729	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.538462
4	2839751	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	2839825	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.428571
4	2839844	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	2839999	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.08
4	2840132	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	4769693	A->G	+	ENSG00000164916	FOXK1	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	5390253	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.538462
7	5390256	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	5622561	A->G	-	ENSG00000011275	RNF216	protein_coding	three_prime_utr	.	.	Alu	0.16
7	6111860	A->G	+	ENSG00000106346	USP42	protein_coding	three_prime_utr	.	.	Alu	0.214286
7	7246188	A->G	+	ENSG00000106392	C1GALT1	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	1782200	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	1782334	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	1782392	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.1
12	2825794	A->G	+	ENSG00000111203	ITFG2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	6819852	A->G	+	ENSG00000010610	CD4	protein_coding	three_prime_utr	.	.	Alu	0.481481
12	7919412	A->G	-	ENSG00000059804	SLC2A3	protein_coding	three_prime_utr	.	.	Alu	1
12	9696287	A->G	+	ENSG00000069493	CLEC2D	protein_coding	three_prime_utr	.	.	Alu	0.606061
12	9752880	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	1
16	4843427	A->G	-	ENSG00000140632	GLYR1	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	9104337	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	9106147	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0451128
16	9106199	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0254237
16	9106409	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0242424
16	9106528	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0344828
16	9106557	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0230769
16	9108377	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0379747
16	9108386	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	9108466	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.025
18	2701254	A->G	+	ENSG00000101596	SMCHD1	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	2072372	A->G	-	ENSG00000172081	MOB3A	protein_coding	three_prime_utr	.	.	Alu	0.1
19	4654529	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	4654576	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	5909750	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.1
19	7084447	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7084454	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7084455	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7084480	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	7084562	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7084567	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.5
19	7084618	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7084627	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	7084633	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.2
19	7085198	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7085298	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.125
19	7085398	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	7085399	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7085972	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.6
19	7086005	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.3
19	7087286	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7087527	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	9561642	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0816327
19	9561643	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.04
19	9561683	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0384615
19	9561707	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0444444
19	9561789	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	9561827	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	9562359	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	9562398	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	9562422	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	9562795	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	9562834	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	9562835	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	9562840	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0697674
19	9562854	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.08
19	9562931	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	9562955	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	9562975	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0810811
19	9562990	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	9562996	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	9563662	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	9563698	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0638298
19	9564296	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.078125
19	9564371	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.317073
19	9565526	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	9565561	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	9650792	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	9650845	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	3869552	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.235294
20	5194893	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.418605
20	5194900	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.162162
20	5195158	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.205882
20	5195159	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.176471
20	5195166	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.257143
1	11029728	A->G	+	ENSG00000271895	AL109811.3	antisense	three_prime_utr	.	.	Alu	0.153846
1	19216900	A->G	+	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.166667
1	19217286	A->G	+	ENSG00000230424	AL035413.1	antisense	three_prime_utr	.	.	Alu	0.2
1	20651864	A->G	-	ENSG00000117242	PINK1-AS	antisense	three_prime_utr	.	.	Alu	0.0606061
1	20651926	A->G	-	ENSG00000117242	PINK1-AS	antisense	three_prime_utr	.	.	Alu	0.0204082
1	20651954	A->G	-	ENSG00000117242	PINK1-AS	antisense	three_prime_utr	.	.	Alu	0.0212766
1	20743623	A->G	-	ENSG00000127483	HP1BP3	protein_coding	three_prime_utr	.	.	Alu	0.0210526
1	20743655	A->G	-	ENSG00000127483	HP1BP3	protein_coding	three_prime_utr	.	.	Alu	0.0204082
1	23961914	A->G	+	ENSG00000189266	PNRC2	protein_coding	three_prime_utr	.	.	Alu	0.58871
1	24538843	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.3
1	24538858	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.181818
1	26876348	A->G	-	ENSG00000226698	AL034380.1	antisense	three_prime_utr	.	.	Alu	0.111111
1	26878706	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.4
1	26878723	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	26878733	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	26878799	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	26879111	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	26879142	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	26879161	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	29065861	A->G	+	ENSG00000159023	EPB41	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32231416	A->G	+	ENSG00000084623	EIF3I	protein_coding	three_prime_utr	.	.	Alu	0.0220588
1	32601288	A->G	+	ENSG00000160062	ZBTB8A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	32633325	A->G	-	ENSG00000176261	ZBTB8OS	protein_coding	three_prime_utr	.	.	Alu	0.2
1	32683659	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	32683665	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.809524
1	35856757	A->G	+	ENSG00000134698	AGO4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	36069313	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	37860927	A->G	-	ENSG00000230955	AL929472.2	antisense	three_prime_utr	.	.	Alu	0.1
1	37861083	A->G	-	ENSG00000230955	AL929472.2	antisense	three_prime_utr	.	.	Alu	0.111111
1	39747629	A->G	+	ENSG00000084072	PPIE	protein_coding	three_prime_utr	.	.	Alu	0.3
1	52351629	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.3
1	52373050	A->G	-	ENSG00000085840	ORC1	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	52409490	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	52409491	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	52409496	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.12
1	52515020	A->G	-	ENSG00000134744	TUT4	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	52515050	A->G	-	ENSG00000134744	TUT4	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	52823222	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	52823225	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.5
1	52823876	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	52823881	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	52824280	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	52824627	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.3
1	54030492	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	66985112	A->G	+	ENSG00000198160	MIER1	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	67409202	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	85653545	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	85653636	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	90032181	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.104478
1	90032190	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.136986
1	90032220	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.0724638
2	20251058	A->G	-	ENSG00000055917	PUM2	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	24000294	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.06
2	24000296	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0425532
2	24000380	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	24000502	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.121212
2	24000529	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	24002158	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	24002595	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	24002670	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	26779553	A->G	+	ENSG00000213699	SLC35F6	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	37100426	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0819672
2	37100446	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.305085
2	37100447	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.271186
2	37100471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.190476
2	37100519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.923077
2	37100559	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.757576
2	37100865	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.147059
2	37100869	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.194444
2	37100870	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.388889
2	37100873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37100932	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.684211
2	37100939	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	37100944	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.347826
2	37100954	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.6875
2	37100989	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	37101530	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.107143
2	37101540	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.40625
2	37101621	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.139535
2	37101657	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	37101996	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.037037
2	37102177	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0235294
2	37102240	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0727273
2	37102241	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0727273
2	37103399	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	37103927	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.04
2	37103982	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	37104016	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37104058	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	37104077	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	37104083	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	37104093	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.25
2	37104096	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.263158
2	37104126	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	37104132	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	37104134	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	37104392	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	37104576	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.030303
2	37104750	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.141176
2	37104773	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0517241
2	37104786	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.529412
2	37104790	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	37104873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.08
2	37104881	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	37104899	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.122222
2	37202484	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	37213532	A->G	-	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.3
2	60899209	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	60899228	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	61049615	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.2
2	61049616	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	61049618	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	61049621	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	61049623	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	61049713	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	61050190	A->G	+	ENSG00000162928	PEX13	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	69461622	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	69461623	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	69461647	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	69461663	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	69461717	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	69461720	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	69461819	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	69461859	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	69462593	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	69462613	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	69462619	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	69463445	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	69463564	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	69463636	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	96249575	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	96276494	A->G	-	ENSG00000144028	SNRNP200	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	97163607	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	97163615	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	97163702	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	97163705	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.4
2	97163715	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.6
2	97163717	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	10151674	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.309278
3	15072187	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.5
3	15072209	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.466667
3	15072226	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	15072229	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.2
3	15072235	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	15072292	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.125
3	15072309	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.277778
3	15072786	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.352941
3	15072888	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	15072894	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	15072897	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	15072914	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.2
3	15072947	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.08
3	15072986	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.1
3	32955350	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	32955351	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.363636
3	32955417	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.6
3	32955426	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.5
3	32955739	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.388889
3	32955749	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	32955791	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	32955816	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.75
3	32955819	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	32955820	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.173913
3	32955852	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	32955870	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.125
3	32955939	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0487805
3	32955958	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	32955971	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	40537340	A->G	+	ENSG00000172888	ZNF621	protein_coding	three_prime_utr	.	.	Alu	0.384615
3	40537352	A->G	+	ENSG00000172888	ZNF621	protein_coding	three_prime_utr	.	.	Alu	0.642857
3	44749167	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.125
3	48750474	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	49359890	A->G	-	ENSG00000067560	RHOA	protein_coding	three_prime_utr	.	.	Alu	0.460237
3	49415396	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.1
3	57272623	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	57272861	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	57563190	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	57563191	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	57563197	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	57563199	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.2
3	57563249	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.227273
3	57563271	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	57563272	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.192308
3	57563273	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	57563632	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	57563763	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.3
3	57563777	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.4
3	57564191	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	57564942	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.217391
3	57564943	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	57564955	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	57565551	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.533333
3	57565552	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.125
3	57565560	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.125
3	57565649	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.2
3	57627241	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
3	57627282	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	57627395	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.4
3	58318799	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	17626122	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	17626925	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	17626928	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17627352	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	17627359	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.0625
4	17629028	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	17632272	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17801878	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0571429
4	17801914	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.384615
4	17801930	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	17802040	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	17803052	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0307692
4	17803092	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0350877
4	17803250	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0454545
4	56460055	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	56460793	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.0714286
4	67469376	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.7
4	75480754	A->G	-	ENSG00000163743	RCHY1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	77718349	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0992366
4	77718350	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0763359
4	77718351	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0827068
4	88258443	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	88258465	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	88259144	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.2
5	37290286	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.266667
5	40830666	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	40831176	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.1
5	65668353	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.208333
5	65668365	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65668388	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	65668392	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	65668393	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.15
5	65668418	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	65668856	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.3
5	65668875	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	65668891	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.766667
5	65668903	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	75377926	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.2
5	75378296	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	79685800	A->G	+	ENSG00000164329	TENT2	protein_coding	three_prime_utr	.	.	Alu	0.0677966
5	81415687	A->G	-	ENSG00000145687	SSBP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	96774840	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.407407
6	12037850	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	12037856	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	12037989	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.235294
6	12038382	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	12038418	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	12038419	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	12038463	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
6	12038621	A->G	+	ENSG00000095951	HIVEP1	protein_coding	three_prime_utr	.	.	Alu	0.15
6	18128983	A->G	-	ENSG00000137364	TPMT	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	36141063	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	42078081	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.3
6	42079582	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.12
6	42079586	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.125
6	42079816	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.4
6	42080502	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42207448	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0512821
6	42887363	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	42888592	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.16
6	44450044	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	73424191	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.375
6	73424267	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	73424312	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.125
6	73424371	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.15
6	73424914	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0697674
6	73424921	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.047619
6	73425021	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.0625
6	89085098	A->G	+	ENSG00000146278	PNRC1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
6	98873694	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	99557550	A->G	-	ENSG00000112237	CCNC	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	17344710	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.056338
7	17344850	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	17345067	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	17345159	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0238095
7	17345229	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0344828
7	17345235	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0280374
7	17345262	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0315789
7	17345319	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.04
7	25120162	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	25120385	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.2
7	25120880	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	25121116	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	25121889	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0689655
7	44580904	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	44580935	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.125
7	44801788	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.1375
7	44801790	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0657895
7	44801809	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0263158
7	44802266	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.075
7	44802349	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.1
7	44802371	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0277778
7	44802500	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.5
7	44829409	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0217391
7	44829466	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0348837
7	44829489	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0229885
7	44834951	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	66153205	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	66153223	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.05
7	66153248	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	66154006	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	92613435	A->G	-	ENSG00000105810	CDK6	protein_coding	three_prime_utr	.	.	Alu	0.0502092
7	99493339	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.020202
7	99493359	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	.	.	Alu	0.0235294
8	23191427	A->G	-	ENSG00000104689	TNFRSF10A	protein_coding	three_prime_utr	.	.	Alu	0.0434783
8	23191518	A->G	-	ENSG00000104689	TNFRSF10A	protein_coding	three_prime_utr	.	.	Alu	0.0416667
8	29063918	A->G	+	ENSG00000147421	HMBOX1	protein_coding	three_prime_utr	.	.	Alu	0.190476
8	38970704	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0350877
8	38971868	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.047619
8	38971892	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0491803
8	38971896	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0666667
8	38972291	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.04
8	38972424	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0210526
8	38972969	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.104167
8	43023735	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43027131	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.133333
8	43027144	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	51817881	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	0.565217
8	55825007	A->G	+	ENSG00000137574	TGS1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	73789406	A->G	-	ENSG00000258677	AC022826.2	protein_coding	three_prime_utr	.	.	Alu	0.125
9	36216029	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0967742
9	36216030	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.1
9	78271927	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	86266970	A->G	-	ENSG00000135070	ISCA1	protein_coding	three_prime_utr	.	.	Alu	0.653846
10	30312053	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
10	30312078	A->G	-	ENSG00000107951	MTPAP	protein_coding	three_prime_utr	.	.	Alu	0.2
10	49973602	A->G	+	ENSG00000178440	LINC00843	lincRNA	three_prime_utr	.	.	Alu	0.333333
10	68479942	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	68479948	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	68479949	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	68480599	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	68480625	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	68480725	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	68481550	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.117647
10	68481573	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	72234375	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0645161
10	72234412	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0909091
10	72235001	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	72235024	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.117647
10	72235435	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0869565
10	73250194	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	32603875	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.5
11	32603976	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	32603982	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.2
11	32604009	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.3
11	32604046	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	32604345	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	32604346	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	32604385	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.0833333
11	36487058	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.130435
11	36487083	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	46677868	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	0.08
11	62830471	A->G	-	ENSG00000162236	STX5	protein_coding	three_prime_utr	.	.	Alu	0.235294
11	65776028	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.4
11	65776883	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	65777064	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	66524158	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	66649792	A->G	+	ENSG00000173933	RBM4	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	68756436	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.0507246
11	69665910	A->G	-	ENSG00000149716	ORAOV1	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	72289695	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.2
11	93735663	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	10315252	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	10315373	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	10315387	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	24816835	A->G	-	ENSG00000060982	BCAT1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	27030259	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.0410959
12	27030271	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.0461538
12	29338427	A->G	-	ENSG00000064763	FAR2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	42233541	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	42233550	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	42233572	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.303571
12	42233577	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0545455
12	42233603	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	42233609	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.242424
12	42233626	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	42233636	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	42233640	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0857143
12	42233676	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	42233695	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	42233725	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	42233761	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	42233786	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	42233794	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.102564
12	42233802	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
12	42233912	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	42233914	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.254237
12	42233926	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.283333
12	42233927	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0819672
12	42233979	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.185185
12	42233988	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.444444
12	42234005	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	42234008	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0731707
12	42234047	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	42234059	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	42234071	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.162791
12	42234078	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0612245
12	42234088	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	42234095	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.16
12	42234135	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.5
12	42234743	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.04
12	42234791	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	42234879	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
12	42234880	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.131579
12	42234901	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	42234905	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.163265
12	42234912	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	42234918	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
12	42234944	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0862069
12	42234981	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.125
12	42234986	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	43787632	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.102564
12	43787801	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.08
12	50930379	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	53296508	A->G	+	ENSG00000123349	PFDN5	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	53296509	A->G	+	ENSG00000123349	PFDN5	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	59783745	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.2
12	59783751	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.4
12	59783752	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.3
12	66121379	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.2
12	66343331	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.352941
12	66343336	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	66343389	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.4
12	66343400	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.357143
12	66343410	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.2
12	68843224	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.242424
12	68843233	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.153846
12	68843262	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	68843263	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.297297
12	68843273	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	68843726	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	68843729	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.225
12	68843730	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	68843746	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.147059
12	68843749	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.447368
12	68843754	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.540541
12	68843961	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.109375
12	75496037	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	75496368	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0487805
12	93506545	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.2
12	98548912	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	98549134	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0769231
13	19672958	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.272727
13	21375025	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.08
13	21375071	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0512821
13	32510793	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.272727
13	32512787	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	32514573	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.26087
13	32514590	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.176471
13	32514591	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.157895
13	32515238	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.157895
13	32515239	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.157895
13	32515316	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.125
13	32515358	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
13	32515359	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	51764925	A->G	+	ENSG00000139668	WDFY2	protein_coding	three_prime_utr	.	.	Alu	0.230769
13	52689832	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.538462
13	52689848	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.571429
13	52689891	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52689901	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
13	52689919	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	52691122	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0882353
13	52691124	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
13	52691128	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.09375
13	52691135	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
13	52691192	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52691245	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
13	52694880	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
13	52694896	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	20366192	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.15
14	20366201	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.315789
14	20366224	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	20366741	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	20366800	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	20367107	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.533333
14	20367276	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	20367280	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	20367306	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	20367311	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.833333
14	20367659	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	20367685	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	20367705	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
14	20367881	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.461538
14	20367882	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.692308
14	21460331	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.25641
14	21460342	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.361111
14	21460402	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	21460419	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.5
14	21460499	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.4
14	21460837	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.2
14	21460839	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.9
14	21460840	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.7
14	21460901	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	24167356	A->G	+	ENSG00000259529	AL136295.5	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	31093525	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31093551	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	31093832	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	31093913	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	31094060	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	31094145	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	31094148	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31094957	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	31095073	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	31095080	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	31095088	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.5
14	31095444	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.7
14	31095628	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.454545
14	31095680	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	31095681	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.583333
14	31447179	A->G	-	ENSG00000250365	AL139353.2	antisense	three_prime_utr	.	.	Alu	0.2
14	35050214	A->G	+	ENSG00000151327	FAM177A1	protein_coding	three_prime_utr	.	.	Alu	0.075
14	35277025	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.545455
14	49576330	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	49576376	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.2
14	49585311	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	52642959	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	52643014	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.842105
14	55367632	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	55367643	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.3
14	55367644	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	55367697	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0967742
14	55367700	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	55367730	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.583333
14	55368227	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0425532
14	55368247	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.152174
14	55368249	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0652174
14	55368258	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0434783
14	55368325	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	57414150	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	57414156	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	70369189	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.125
14	70369199	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	74058061	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	74058227	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	74058241	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	74058245	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	74058270	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	76205135	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0408163
14	76205209	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.097561
14	76205243	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.107143
14	89160384	A->G	-	ENSG00000053254	FOXN3	protein_coding	three_prime_utr	.	.	Alu	0.0631579
14	89160423	A->G	-	ENSG00000053254	FOXN3	protein_coding	three_prime_utr	.	.	Alu	0.1
14	95415416	A->G	-	ENSG00000176438	SYNE3	protein_coding	three_prime_utr	.	.	Alu	0.1
15	31376805	A->G	+	ENSG00000169926	KLF13	protein_coding	three_prime_utr	.	.	Alu	0.44697
15	42258564	A->G	-	ENSG00000103978	TMEM87A	protein_coding	three_prime_utr	.	.	Alu	0.176471
15	42258565	A->G	-	ENSG00000103978	TMEM87A	protein_coding	three_prime_utr	.	.	Alu	0.25
15	42258678	A->G	-	ENSG00000103978	TMEM87A	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	42531590	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	42532359	A->G	+	ENSG00000261684	AC018362.1	antisense	three_prime_utr	.	.	Alu	0.030303
15	42541269	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	42541392	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.2
15	42543008	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0645161
15	42543039	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0689655
15	42543292	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	42543451	A->G	-	ENSG00000180979	LRRC57	protein_coding	three_prime_utr	.	.	Alu	0.0571429
15	44413972	A->G	+	ENSG00000259595	AC025043.1	antisense	three_prime_utr	.	.	Alu	0.0224719
15	49126659	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.0943396
15	49126927	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.155556
15	50557939	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.2
15	50558445	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.2
15	50558448	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.133333
15	50558490	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.166667
15	50558520	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.3
15	50558521	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.3
15	50559411	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.230769
15	50559444	A->G	-	ENSG00000259684	AC084756.1	antisense	three_prime_utr	.	.	Alu	0.176471
15	50703158	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	61853792	A->G	-	ENSG00000259564	AC009554.1	antisense	three_prime_utr	.	.	Alu	0.0294118
15	63130362	A->G	+	ENSG00000103642	LACTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	63542189	A->G	+	ENSG00000140455	USP3	protein_coding	three_prime_utr	.	.	Alu	0.425
15	64169309	A->G	-	ENSG00000169118	CSNK1G1	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	72370499	A->G	-	ENSG00000260729	AC009690.1	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	75419563	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	75420412	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	75420556	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	90272625	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.25
15	90272633	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	90273737	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.1875
15	90273769	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	90274656	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	92946510	A->G	+	ENSG00000279765	AC013394.1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	10924495	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	10926577	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.2
16	10928520	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	11834893	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	23465153	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.208333
16	23465205	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	23465829	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	28966709	A->G	+	ENSG00000260853	AC109460.2	antisense	three_prime_utr	.	.	Alu	0.133333
16	29665276	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.029703
16	29667678	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0338983
16	29667803	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0483871
16	29667815	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0862069
16	29668111	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.314815
16	29668178	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0621118
16	29668184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.128049
16	29668331	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29668765	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0520833
16	29668922	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29669124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0327869
16	29669232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.4
16	29669895	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.35
16	31090854	A->G	-	ENSG00000255439	AC135050.2	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	48352579	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
16	48353479	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.125
16	50673059	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	50673084	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0454545
16	50673146	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.157895
16	50673215	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	50673239	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	50673255	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0465116
16	50673269	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.05
16	50673293	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0697674
16	69327767	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.25
16	69327768	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	70247969	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	70247972	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.08
16	70248914	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.235294
16	70249316	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.130435
16	70249733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0444444
16	75445912	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	87403158	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	three_prime_utr	.	.	Alu	1
16	89564054	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	89740470	A->G	+	ENSG00000158805	ZNF276	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	89740593	A->G	+	ENSG00000158805	ZNF276	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	89889278	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	89889295	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.15
16	89889303	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	89889358	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.108108
16	89889360	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.242424
16	89889362	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	89889363	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.30303
16	89889397	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.097561
16	89889412	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.113208
16	89889437	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	89889445	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.255814
17	10678976	A->G	-	ENSG00000133028	SCO1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	10679031	A->G	-	ENSG00000133028	SCO1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	10679038	A->G	-	ENSG00000133028	SCO1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	17186671	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.08
17	17186702	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.1
17	17189269	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.3
17	29263415	A->G	-	ENSG00000108256	NUFIP2	protein_coding	three_prime_utr	.	.	Alu	0.504673
17	31534407	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	31534510	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.454545
17	31534537	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	31535142	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.2
17	31535165	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.2
17	31535184	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.3
17	31535190	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.6
17	31535199	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	32372657	A->G	+	ENSG00000010244	ZNF207	protein_coding	three_prime_utr	.	.	Alu	0.0576923
17	32373457	A->G	+	ENSG00000010244	ZNF207	protein_coding	three_prime_utr	.	.	Alu	0.46875
17	35007984	A->G	+	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	35008002	A->G	+	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	35008015	A->G	+	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.08
17	35098310	A->G	-	ENSG00000267618	AC004223.3	protein_coding	three_prime_utr	.	.	Alu	0.4
17	35473948	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	35473949	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.5
17	35474101	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.25
17	35474112	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.416667
17	35474113	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.25
17	37611878	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.111111
17	37611899	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.0869565
17	37611904	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.105263
17	37611915	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.1875
17	37612270	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.153846
17	37612304	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.285714
17	37612350	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.105263
17	37614098	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.1
17	38849513	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	38849886	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	39255759	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.125
17	39259884	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39759159	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	39759259	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.125
17	39759294	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39759316	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39759378	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.1
17	39759380	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	39760208	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.125
17	39760294	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	39760295	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39760301	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	39760347	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.125
17	39760948	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	39760966	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.5
17	39761041	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	39761058	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.545455
17	39761070	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39761454	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39761460	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.16129
17	39761470	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0689655
17	39761474	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.192308
17	39761482	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.461538
17	39761493	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	39761496	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.185185
17	39761497	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	39761542	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	39761550	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.125
17	39761951	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.357143
17	39761977	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.3
17	39761978	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.35
17	39761991	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	39762630	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.227273
17	39762682	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	39763883	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39763889	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39763911	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	39763914	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.107143
17	39763916	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.724138
17	39763951	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.352941
17	39763952	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.764706
17	39763965	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	39763991	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	39763992	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	39764008	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	39764032	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39764033	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39764034	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	39764037	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39764049	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.277778
17	39764207	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.6
17	39764219	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.5
17	39764281	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.357143
17	39764299	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	39764340	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	39764369	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.25
17	39764382	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.588235
17	39764403	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39764408	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.210526
17	39764418	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	39764419	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.555556
17	39764451	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.2
17	49296666	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	49296668	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.190476
17	49296740	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	49830245	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	49830294	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	49830320	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	49830323	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.08
17	49831048	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	49831057	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	49831076	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.125
17	49831842	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	49832190	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	49832199	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	49832208	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.0645161
17	49834287	A->G	+	ENSG00000262837	AC027801.4	lincRNA	three_prime_utr	.	.	Alu	0.142857
17	49834289	A->G	+	ENSG00000262837	AC027801.4	lincRNA	three_prime_utr	.	.	Alu	0.2
17	49834883	A->G	+	ENSG00000262837	AC027801.4	lincRNA	three_prime_utr	.	.	Alu	0.4
17	49834929	A->G	+	ENSG00000262837	AC027801.4	lincRNA	three_prime_utr	.	.	Alu	0.2
17	57972462	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.12
17	57972463	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.36
17	57972464	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.16
17	57972468	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.434783
17	75943979	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.136364
17	81563510	A->G	-	ENSG00000182446	NPLOC4	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	81673286	A->G	+	ENSG00000185298	CCDC137	protein_coding	three_prime_utr	.	.	Alu	0.125
17	82461008	A->G	+	ENSG00000141562	NARF	protein_coding	three_prime_utr	.	.	Alu	0.214286
18	32069122	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0512821
18	32070121	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.025641
18	32070166	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0535714
18	32070170	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0833333
18	32070318	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0387597
18	32070378	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0352941
18	32070761	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0576923
18	32070878	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0377358
18	32071154	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0333333
18	32071185	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0833333
18	32071214	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0714286
18	32071261	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0465116
18	32071264	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.06
18	32071277	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0327869
18	32071343	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0205479
18	32071913	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0465116
18	32071952	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0229008
18	47837304	A->G	-	ENSG00000175387	SMAD2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
18	47837333	A->G	-	ENSG00000175387	SMAD2	protein_coding	three_prime_utr	.	.	Alu	0.117647
18	49393718	A->G	-	ENSG00000141627	DYM	protein_coding	three_prime_utr	.	.	Alu	0.230769
18	49393732	A->G	-	ENSG00000141627	DYM	protein_coding	three_prime_utr	.	.	Alu	0.133333
18	58751329	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	58751452	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.25
18	58752185	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.190476
18	58752219	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.192308
18	58752517	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.272727
18	58752551	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.25
18	59329953	A->G	-	ENSG00000074695	LMAN1	protein_coding	three_prime_utr	.	.	Alu	0.0943396
18	59330287	A->G	-	ENSG00000074695	LMAN1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
18	63390071	A->G	-	ENSG00000119541	VPS4B	protein_coding	three_prime_utr	.	.	Alu	0.0322581
18	63390211	A->G	-	ENSG00000119541	VPS4B	protein_coding	three_prime_utr	.	.	Alu	0.0289855
19	10930104	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.0425532
19	11450544	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	11450568	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.205882
19	12078219	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	12078299	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.125
19	12078307	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.125
19	12078379	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	12079093	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	12079386	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	12079391	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	12079396	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.3
19	12080854	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	12080935	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12632526	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	12632548	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	12632595	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12632714	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	14734519	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	14735362	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	14735363	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	15354124	A->G	-	ENSG00000105127	AKAP8	protein_coding	three_prime_utr	.	.	Alu	0.0253165
19	16093075	A->G	+	ENSG00000167460	TPM4	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	17826166	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0206186
19	17826186	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0222222
19	17826261	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	17826263	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	17826309	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0444444
19	17826338	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0285714
19	18070688	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	18070930	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18364350	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	18364380	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	18364564	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	18365366	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	18365578	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	18365579	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	18365624	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18366138	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.135135
19	18366476	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18366745	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	18366890	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	18367045	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18368058	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	19680361	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	19681479	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	19681495	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	19681496	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	19681526	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.458333
19	19681550	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	19681552	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	19681588	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	19681598	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	19681984	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	19682268	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.2
19	19682345	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	19682346	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	19682359	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.129032
19	19682483	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	19682900	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.294118
19	19682919	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	19682920	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	19683079	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.192308
19	19791733	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.3
19	19792224	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.181818
19	19792366	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.3
19	19792376	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.3
19	21034617	A->G	+	ENSG00000118620	ZNF430	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	21121057	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	21184135	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	21185671	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21185713	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	21185735	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	21186027	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21186140	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	21291623	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21292302	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	23221666	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.3
19	23221829	A->G	-	ENSG00000196081	ZNF724	protein_coding	three_prime_utr	.	.	Alu	0.3
19	23359387	A->G	-	ENSG00000167232	ZNF91	protein_coding	three_prime_utr	.	.	Alu	0.0294118
19	34470448	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	35159997	A->G	+	ENSG00000089327	FXYD5	protein_coding	three_prime_utr	.	.	Alu	0.6
19	36545838	A->G	-	ENSG00000186020	ZNF529	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	37390281	A->G	+	ENSG00000189164	ZNF527	protein_coding	three_prime_utr	.	.	Alu	0.2
19	41872607	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	45407906	A->G	-	ENSG00000117877	CD3EAP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	52556182	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.25
19	52556196	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.25
19	52556204	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.1
19	52556205	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	52556227	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	52556250	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	52556260	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	52556375	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.3
19	52618669	A->G	-	ENSG00000167766	ZNF83	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	52618692	A->G	-	ENSG00000167766	ZNF83	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52839310	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	52839348	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	55661834	A->G	+	ENSG00000063244	U2AF2	protein_coding	three_prime_utr	.	.	Alu	0.740741
19	57214149	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	57216209	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57845025	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	57845057	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	57845076	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57845077	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	57845110	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57845156	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57845172	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.4
19	57860381	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	57860469	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	57860478	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	57860489	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	57860631	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57860673	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.470588
19	57860680	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.764706
19	57860701	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	57860997	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	57861352	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57861355	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	57861379	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	57861384	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57861395	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	57861400	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	57861411	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1
19	57861803	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	57861817	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.125
19	57861909	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57862035	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.08
19	57862036	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.08
19	57862984	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.125
19	57863033	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57863081	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	57863339	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	57863781	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57863789	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	57863790	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	57907048	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.6
19	57907086	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	57907087	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.5
19	57907124	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57907125	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	58126887	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	58126934	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	58127284	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	58127338	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.15
19	58127394	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.3
19	58296436	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.269231
19	58296499	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	58296524	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58296534	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	58296647	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.636364
19	58296968	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	58297022	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58297036	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.25
19	58297081	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	58297084	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	58297110	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	58297111	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	58297436	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	58297444	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	58297540	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	58297543	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	58297553	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	58297648	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.15
19	58298086	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.1
19	58298205	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	58298228	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.5
19	58298290	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	58298291	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.25
19	58298559	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.125
19	58300000	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.102564
20	31538972	A->G	+	ENSG00000101294	HM13	protein_coding	three_prime_utr	.	.	Alu	0.4
20	32371813	A->G	+	ENSG00000171456	ASXL1	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	45077504	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0517241
20	45078286	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0862069
20	45078404	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0566038
20	45079094	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0361446
21	42909416	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	42909743	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.384615
21	42909760	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.416667
21	42909779	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.2
21	42909780	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	42909825	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.117647
21	42909831	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.214286
21	42909849	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.266667
21	42909884	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.363636
21	42909887	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.5
21	42909948	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.363636
21	42911607	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.5
21	42911608	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.4
21	42911665	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	18088704	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0869565
22	18091629	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	18097823	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	20890843	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	21685657	A->G	+	ENSG00000100023	PPIL2	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	21685711	A->G	+	ENSG00000100023	PPIL2	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	21685723	A->G	+	ENSG00000100023	PPIL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	26522836	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.105263
22	26522919	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.25
22	26523607	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.2
22	26523639	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	26524340	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.210526
22	26524342	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.2
22	26524395	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	26524398	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	26524457	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	26524471	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
22	26524501	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.227273
22	26525261	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
22	26525328	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.09375
22	26525381	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
22	26525382	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.37931
22	26525384	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.16129
22	35659793	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.880952
22	35659860	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	35659866	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.416667
22	35659869	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.5
22	35659883	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	35659932	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0465116
22	35659940	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.375
22	35659956	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0357143
22	35660002	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.193878
22	35660344	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	35660345	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.126984
22	35660362	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.16
22	35660363	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.430556
22	35660407	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0588235
22	35660444	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.696203
22	35660445	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.546667
22	35660460	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0705882
22	35660499	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	35660551	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.83871
22	35660685	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.482353
22	35660703	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.15
22	35661199	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.08
22	35661279	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	35661283	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	39018888	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0689655
22	41922403	A->G	-	ENSG00000159958	TNFRSF13C	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	45340969	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	145741866	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.2
1	145741875	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	149555674	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.9
1	150621511	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	150732828	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0212766
1	150732876	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0238095
1	151119442	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151124261	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151124262	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151291920	A->G	-	ENSG00000143373	ZNF687	protein_coding	three_prime_utr	.	.	Alu	0.529412
1	155882003	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	160998145	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	160998188	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	168251299	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
1	179073347	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	179357143	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.6
1	184793330	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	184793434	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	204551146	A->G	+	ENSG00000198625	MDM4	protein_coding	three_prime_utr	.	.	Alu	0.2
1	204551314	A->G	+	ENSG00000198625	MDM4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	222669496	A->G	-	ENSG00000186063	AIDA	protein_coding	three_prime_utr	.	.	Alu	0.409091
1	225983579	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0458015
1	225984554	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.021978
1	228178421	A->G	+	ENSG00000181873	IBA57	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	228178563	A->G	+	ENSG00000181873	IBA57	protein_coding	three_prime_utr	.	.	Alu	0.2
1	231335100	A->G	-	ENSG00000116903	EXOC8	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	231335118	A->G	-	ENSG00000116903	EXOC8	protein_coding	three_prime_utr	.	.	Alu	0.0517241
2	101271462	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0444444
2	101271525	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0338983
2	113205229	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	113205230	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	113205242	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	128192521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	130159526	A->G	-	ENSG00000136699	SMPD4	protein_coding	three_prime_utr	.	.	Alu	0.1
2	130159555	A->G	-	ENSG00000136699	SMPD4	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	172607147	A->G	+	ENSG00000152256	PDK1	protein_coding	three_prime_utr	.	.	Alu	0.307692
2	190933943	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.0677966
2	190934866	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.234694
2	196134255	A->G	-	ENSG00000081320	STK17B	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	200977659	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.166667
2	200977849	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.117647
2	201164032	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	201164041	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	201165351	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	201165445	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.2
2	201165481	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	201165515	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	201165534	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.2
2	201165546	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	201167317	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.03125
2	201167344	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0333333
2	201167408	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0555556
2	201167494	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0645161
2	201167511	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.05
2	201167512	A->G	+	ENSG00000234431	AC007283.1	3prime_overlapping_ncRNA	three_prime_utr	.	.	Alu	0.0512821
2	201217939	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	201219014	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	201219036	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	201219190	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.1
2	201286639	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	201286720	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0327869
2	201286881	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0775194
2	201286902	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0212766
2	201287259	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0258621
2	201287275	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.102273
2	201287323	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0754717
2	201287324	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.08
2	201287368	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.131579
2	203297450	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	203297666	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	216501721	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.195652
2	218574150	A->G	+	ENSG00000144580	CNOT9	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	218574202	A->G	+	ENSG00000144580	CNOT9	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	218574208	A->G	+	ENSG00000144580	CNOT9	protein_coding	three_prime_utr	.	.	Alu	0.2
2	218574217	A->G	+	ENSG00000144580	CNOT9	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	101823512	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	101823520	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	101823609	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	101824448	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.1
3	101824452	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.130435
3	101824467	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.2
3	101824609	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.545455
3	119826352	A->G	-	ENSG00000082701	GSK3B	protein_coding	three_prime_utr	.	.	Alu	0.09375
3	122573487	A->G	+	ENSG00000163840	DTX3L	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	128071406	A->G	+	ENSG00000175792	RUVBL1	protein_coding	three_prime_utr	.	.	Alu	0.109375
3	141946757	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	141948846	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	141948886	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.08
3	141948996	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	141949031	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.1
3	141949038	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.1
3	142160198	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142160883	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	142161291	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	142161988	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.4
3	142163830	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.7
3	142184720	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.916667
3	142184753	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	142184829	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.6
3	142185331	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	156540600	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.3
3	170088903	A->G	-	ENSG00000268220	AC008040.5	antisense	three_prime_utr	.	.	Alu	0.117647
3	170088948	A->G	-	ENSG00000268220	AC008040.5	antisense	three_prime_utr	.	.	Alu	0.142857
3	170089003	A->G	-	ENSG00000268220	AC008040.5	antisense	three_prime_utr	.	.	Alu	0.0833333
3	170089159	A->G	-	ENSG00000268220	AC008040.5	antisense	three_prime_utr	.	.	Alu	0.0967742
3	170089163	A->G	-	ENSG00000268220	AC008040.5	antisense	three_prime_utr	.	.	Alu	0.1
3	170089699	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.0571429
3	170092022	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	170092092	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	179397623	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.0833333
3	179398210	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.166667
3	179398497	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.7
3	179398509	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.166667
3	179398517	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.416667
3	179398521	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.166667
3	179399225	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0425532
3	179399476	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	183672640	A->G	+	ENSG00000114796	KLHL24	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	188879039	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	196352449	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	196353651	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	197956098	A->G	+	ENSG00000182899	RPL35A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	108625515	A->G	+	ENSG00000109475	RPL34	protein_coding	three_prime_utr	.	.	Alu	0.2
4	108625525	A->G	+	ENSG00000109475	RPL34	protein_coding	three_prime_utr	.	.	Alu	0.2
4	139045646	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0444444
4	139045698	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.047619
4	139045701	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0731707
4	152625465	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.3
4	165076867	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	176331087	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.234568
4	176331175	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.305556
4	176331176	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.458333
4	176331183	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0506329
4	176331754	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.025641
4	176331774	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0266667
5	115206616	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.642857
5	115206642	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	115207624	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.466667
5	119394816	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.3
5	122027184	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	126625721	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	131162136	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
5	131201698	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131201730	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	131201823	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.6
5	134152798	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.2
5	134153365	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
5	134153397	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	134153475	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	134153476	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	134154261	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.2
5	141377454	A->G	+	ENSG00000204956	PCDHGA1	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	157213672	A->G	+	ENSG00000253980	AC010609.1	antisense	three_prime_utr	.	.	Alu	0.153846
5	157477823	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.5625
5	157477914	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.5
5	157477921	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.125
5	157477957	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	157478388	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.428571
5	157478389	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	157478390	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	157478552	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.636364
5	157478558	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	157478559	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.461538
5	163446909	A->G	+	ENSG00000170584	NUDCD2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	168549799	A->G	-	ENSG00000120137	PANK3	protein_coding	three_prime_utr	.	.	Alu	0.0377358
5	175528103	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	109464684	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.1
6	118813772	A->G	-	ENSG00000111877	MCM9	protein_coding	three_prime_utr	.	.	Alu	1
6	119178352	A->G	-	ENSG00000111885	MAN1A1	protein_coding	three_prime_utr	.	.	Alu	0.109589
6	149448108	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	149448481	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.2
6	149449082	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.35
6	149449357	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.235294
6	149449361	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.4
6	149449362	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.4
6	149726023	A->G	-	ENSG00000120253	NUP43	protein_coding	three_prime_utr	.	.	Alu	0.157895
7	100212662	A->G	-	ENSG00000066923	STAG3	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	100212727	A->G	-	ENSG00000066923	STAG3	protein_coding	three_prime_utr	.	.	Alu	0.461538
7	100212732	A->G	-	ENSG00000066923	STAG3	protein_coding	three_prime_utr	.	.	Alu	0.538462
7	100212733	A->G	-	ENSG00000066923	STAG3	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	101092133	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.2
7	102448807	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.08
7	102449694	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	102545409	A->G	-	ENSG00000168255	POLR2J3	protein_coding	three_prime_utr	.	.	Alu	0.5
7	102566004	A->G	-	ENSG00000168255	POLR2J3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	102580055	A->G	-	ENSG00000270249	AC093668.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	102580072	A->G	-	ENSG00000270249	AC093668.1	protein_coding	three_prime_utr	.	.	Alu	0.117647
7	102580091	A->G	-	ENSG00000270249	AC093668.1	protein_coding	three_prime_utr	.	.	Alu	0.304348
7	102637154	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.16
7	102637155	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.08
7	106906386	A->G	+	ENSG00000105851	PIK3CG	protein_coding	three_prime_utr	.	.	Alu	0.0967742
7	128503123	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.2
7	150331697	A->G	+	ENSG00000188707	ZBED6CL	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	150331699	A->G	+	ENSG00000188707	ZBED6CL	protein_coding	three_prime_utr	.	.	Alu	0.538462
7	156970237	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	103399698	A->G	-	ENSG00000164933	SLC25A32	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	141141809	A->G	+	ENSG00000105339	DENND3	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	141141828	A->G	+	ENSG00000105339	DENND3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	141141897	A->G	+	ENSG00000105339	DENND3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	141141977	A->G	+	ENSG00000105339	DENND3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
9	112222112	A->G	-	ENSG00000119314	PTBP3	protein_coding	three_prime_utr	.	.	Alu	0.0215054
9	128309290	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	133362696	A->G	-	ENSG00000148248	SURF4	protein_coding	three_prime_utr	.	.	Alu	0.138298
9	136833179	A->G	+	ENSG00000196642	RABL6	protein_coding	three_prime_utr	.	.	Alu	1
10	100232443	A->G	-	ENSG00000227492	AL138921.1	antisense	three_prime_utr	.	.	Alu	0.1
10	100232448	A->G	-	ENSG00000227492	AL138921.1	antisense	three_prime_utr	.	.	Alu	0.103448
10	100232888	A->G	-	ENSG00000227492	AL138921.1	antisense	three_prime_utr	.	.	Alu	0.0344828
10	119573281	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.2
10	131912596	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	three_prime_utr	.	.	Alu	1
11	108365852	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.105263
11	112143405	A->G	-	ENSG00000255292	AP002884.3	protein_coding	three_prime_utr	.	.	Alu	0.027027
11	118449479	A->G	+	ENSG00000118058	KMT2A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	118748643	A->G	-	ENSG00000255422	AP002954.1	antisense	three_prime_utr	.	.	Alu	0.072
11	118750989	A->G	-	ENSG00000110367	DDX6	protein_coding	three_prime_utr	.	.	Alu	0.183673
11	119001779	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.190476
11	119001801	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.7
11	119001811	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	108785196	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.2
12	108785217	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	108786637	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	108786643	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	111895733	A->G	+	ENSG00000089022	MAPKAPK5	protein_coding	three_prime_utr	.	.	Alu	0.2
12	111895776	A->G	+	ENSG00000089022	MAPKAPK5	protein_coding	three_prime_utr	.	.	Alu	0.3
12	120460853	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.2
12	121778388	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0517241
12	122769110	A->G	+	ENSG00000139726	DENR	protein_coding	three_prime_utr	.	.	Alu	0.125
12	122769132	A->G	+	ENSG00000139726	DENR	protein_coding	three_prime_utr	.	.	Alu	0.259259
12	122866246	A->G	-	ENSG00000256152	AC027290.1	lincRNA	three_prime_utr	.	.	Alu	0.0697674
12	132721299	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	132721653	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	132722433	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	132770150	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.2
14	100279554	A->G	+	ENSG00000100811	YY1	protein_coding	three_prime_utr	.	.	Alu	0.104651
14	102036851	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.117647
14	102037214	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0952381
14	105049500	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.2
14	105049774	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	101284774	A->G	-	ENSG00000131876	SNRPA1	protein_coding	three_prime_utr	.	.	Alu	0.166667