Chr	Position	Editing	Strand	Ensembl_ID	Gene_name	Gene_type	Genomic_region	effect	AA_change	Repeat	AD6034_rel
MT	3987	A->G	+	ENSG00000198888	MT-ND1	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	1
MT	15326	A->G	+	ENSG00000198727	MT-CYB	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	1
19	1475425	A->G	-	ENSG00000119559	C19orf25	protein_coding	CDS	missense_variant	p.Thr->Ala	Alu	0.142857
19	1475463	A->G	-	ENSG00000119559	C19orf25	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.181818
17	1578705	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intron	non_coding_transcript_exon_variant	.	Alu	0.142857
X	2221159	A->G	-	ENSG00000169084	DHRSX	protein_coding	CDS	missense_variant	p.His->Arg	Alu	1
4	2938299	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.552632
4	2938304	A->G	-	ENSG00000087269	NOP14	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.175
12	6826812	A->G	+	ENSG00000250510	GPR162	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.636364
12	6856030	A->G	+	ENSG00000111667	USP5	protein_coding	CDS	synonymous_variant	p.Gly->Gly	Alu	0.571429
12	7936170	A->G	-	ENSG00000059804	SLC2A3	protein_coding	five_prime_utr	upstream_gene_variant	.	Alu	1
12	8515301	A->G	+	ENSG00000166527	CLEC4D	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	1
12	9693923	A->G	+	ENSG00000069493	CLEC2D	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.0350877
12	10315316	A->G	+	ENSG00000134539	KLRD1	protein_coding	exon	missense_variant	p.Lys->Arg	Alu	0.333333
12	10315335	A->G	+	ENSG00000134539	KLRD1	protein_coding	exon	synonymous_variant	p.Pro->Pro	Alu	0.024
12	10419945	A->G	-	ENSG00000255641	AC068775.1	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	1
6	10758975	A->G	+	ENSG00000137210	TMEM14B	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.142857
6	10758988	A->G	+	ENSG00000137210	TMEM14B	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.117647
12	11034879	A->G	-	ENSG00000231887	PRH1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.272727
19	16151498	A->G	+	ENSG00000196684	HSH2D	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0967742
11	17076518	A->G	-	ENSG00000110700	RPS13	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0666667
20	17659159	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.10625
20	17659189	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.0537634
20	17659219	A->G	-	ENSG00000125844	RRBP1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.10687
19	18071210	A->G	-	ENSG00000096996	IL12RB1	protein_coding	Intron	stop_lost	p.Ter->Trp	Alu	0.0338983
19	18071248	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.0862069
19	18071260	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.210526
19	18071287	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Arg->Arg	Alu	0.0273973
19	18071289	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.175676
19	18071290	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.027027
19	18071296	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.206349
19	18071320	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.370787
19	18071325	A->G	-	ENSG00000096996	IL12RB1	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.113636
19	18173937	A->G	+	ENSG00000216490	IFI30	protein_coding	exon	synonymous_variant	p.Leu->Leu	Alu	0.061194
16	18786302	A->G	-	ENSG00000134419	RPS15A	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.0571429
16	18868647	A->G	-	ENSG00000157106	SMG1	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.727273
16	18896930	A->G	-	ENSG00000157106	SMG1	protein_coding	exon	missense_variant	p.Asp->Gly	Alu	0.548387
1	19600837	A->G	+	ENSG00000173436	MINOS1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.2
19	19792425	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	non_coding_transcript_exon_variant	.	Alu	0.214286
19	19792426	A->G	-	ENSG00000267581	AC011477.4	lincRNA	exon	non_coding_transcript_exon_variant	.	Alu	0.133333
19	19792444	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	exon	non_coding_transcript_exon_variant	.	Alu	0.166667
19	21098817	A->G	+	ENSG00000160352	ZNF714	protein_coding	CDS	missense_variant&splice_region_variant	p.Ile->Val	Alu	0.5
14	21965786	A->G	+	ENSG00000211794	TRAV12-3	TR_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.162791
22	22215018	A->G	+	ENSG00000211642	IGLV10-54	IG_V_gene	CDS	missense_variant	p.Arg->Gly	Alu	0.15
22	22712956	A->G	+	ENSG00000211662	IGLV3-21	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.0833333
22	22720878	A->G	+	ENSG00000211663	IGLV3-19	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.101695
22	22721067	A->G	+	ENSG00000211663	IGLV3-19	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.225
22	22792948	A->G	+	ENSG00000211668	IGLV2-11	IG_V_gene	CDS	missense_variant	p.Gln->Arg	Alu	0.176471
22	22812004	A->G	+	ENSG00000211669	IGLV3-10	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.285714
19	23359496	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.0245902
19	23359502	A->G	-	ENSG00000167232	ZNF91	protein_coding	CDS	synonymous_variant	p.Thr->Thr	Alu	0.0220588
14	24212592	A->G	-	ENSG00000254505	CHMP4A	protein_coding	CDS	missense_variant	p.Asp->Gly	Alu	0.0408163
4	25159528	A->G	-	ENSG00000109618	SEPSECS	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.15
18	26081328	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.117647
18	26081358	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.105263
18	26081359	A->G	-	ENSG00000141380	SS18	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.105263
12	27030182	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.0555556
12	27030183	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0526316
12	27030188	A->G	+	ENSG00000152944	MED21	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.09375
15	28299408	A->G	-	ENSG00000128731	HERC2	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0545455
17	31304952	A->G	-	ENSG00000185862	EVI2B	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.468647
6	31810085	A->G	-	ENSG00000204390	HSPA1L	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.3
6	31810248	A->G	-	ENSG00000204390	HSPA1L	protein_coding	CDS	synonymous_variant	p.Lys->Lys	Alu	0.272727
6	32530185	A->G	-	ENSG00000198502	HLA-DRB5	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	1
6	32761662	A->G	-	ENSG00000232629	HLA-DQB2	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	1
21	33550950	A->G	+	ENSG00000159140	SON	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.081761
21	33551013	A->G	+	ENSG00000159140	SON	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.0704698
17	35474923	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intron	stop_lost&splice_region_variant	p.Ter->Trp	Alu	0.303571
17	35474928	A->G	-	ENSG00000205045	SLFN12L	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0363636
20	35713827	A->G	-	ENSG00000131051	RBM39	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.0240964
17	36195866	A->G	-	ENSG00000276085	CCL3L1	protein_coding	CDS	synonymous_variant	p.Arg->Arg	Alu	1
5	38949393	A->G	-	ENSG00000164327	RICTOR	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0754717
22	38961629	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	0.427313
5	39270571	A->G	-	ENSG00000082074	FYB1	protein_coding	exon	start_lost&splice_region_variant	p.Met->Met	Alu	0.365854
19	44496590	A->G	-	ENSG00000167384	ZNF180	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
13	45516235	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.125
13	45516236	A->G	+	ENSG00000136152	COG3	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.460317
22	46292235	A->G	+	ENSG00000075234	TTC38	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.1
6	47580869	A->G	+	ENSG00000198087	CD2AP	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.47619
3	49360949	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.571429
3	49360951	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.25
3	49360961	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.117647
3	49360990	A->G	-	ENSG00000067560	RHOA	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.3125
10	49935104	A->G	-	ENSG00000227345	PARG	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.130435
10	49942262	A->G	+	ENSG00000204152	TIMM23B	protein_coding	CDS	missense_variant	p.Glu->Gly	Alu	0.0517241
19	52845204	A->G	-	ENSG00000204604	ZNF468	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0833333
19	52845221	A->G	-	ENSG00000204604	ZNF468	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.08
19	52845228	A->G	-	ENSG00000204604	ZNF468	protein_coding	exon	missense_variant	p.Arg->Gly	Alu	0.107143
19	52845268	A->G	-	ENSG00000204604	ZNF468	protein_coding	exon	synonymous_variant	p.Val->Val	Alu	0.111111
12	53296435	A->G	+	ENSG00000123349	PFDN5	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.52459
19	53449881	A->G	+	ENSG00000160336	ZNF761	protein_coding	CDS	missense_variant&splice_region_variant	p.Arg->Gly	Alu	0.166667
2	54051047	A->G	+	ENSG00000170634	ACYP2	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.111111
19	54221229	A->G	-	ENSG00000204577	LILRB3	protein_coding	exon	missense_variant	p.Gln->Arg	Alu	0.804878
19	54222756	A->G	-	ENSG00000204577	LILRB3	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.125
19	54596482	A->G	+	ENSG00000104974	LILRA1	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.418079
19	54818479	A->G	+	ENSG00000167633	KIR3DL1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.585366
4	57110068	A->G	-	ENSG00000163453	IGFBP7	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.166667
3	58156074	A->G	+	ENSG00000136068	FLNB	protein_coding	CDS	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.421053
11	61438256	A->G	+	ENSG00000167985	SDHAF2	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
11	61438300	A->G	+	ENSG00000167985	SDHAF2	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.272727
20	62813277	A->G	+	ENSG00000060491	OGFR	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	0.685714
17	64350416	A->G	-	ENSG00000261371	PECAM1	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.450207
17	64869127	A->G	-	ENSG00000176809	LRRC37A3	protein_coding	CDS	synonymous_variant	p.Pro->Pro	Alu	1
16	70130431	A->G	+	ENSG00000090857	PDPR	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.857143
10	72715198	A->G	+	ENSG00000156026	MCU	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.0967742
14	73160026	A->G	+	ENSG00000080815	PSEN1	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.117647
14	73160062	A->G	+	ENSG00000080815	PSEN1	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.25
14	73491067	A->G	+	ENSG00000170468	RIOX1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	1
2	73732609	A->G	-	ENSG00000144034	TPRKB	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.0769231
15	75351324	A->G	+	ENSG00000140398	NEIL1	protein_coding	Intron	non_coding_transcript_exon_variant	.	Alu	0.285714
15	75366004	A->G	-	ENSG00000140400	MAN2C1	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.230769
4	77058527	A->G	-	ENSG00000118816	CCNI	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0673913
17	82483212	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	exon	missense_variant	p.Gln->Arg	Alu	0.272727
17	82483234	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	exon	synonymous_variant	p.Ser->Ser	Alu	0.166667
17	82483239	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	exon	missense_variant	p.Glu->Gly	Alu	0.333333
2	89010243	A->G	-	ENSG00000241755	IGKV1-9	IG_V_gene	CDS	synonymous_variant	p.Pro->Pro	Alu	0.09375
1	89020144	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.222222
1	89020153	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.117647
1	89020187	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.117647
1	89020203	A->G	-	ENSG00000117226	GBP3	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.25
2	89027453	A->G	-	ENSG00000241351	IGKV3-11	IG_V_gene	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0652174
2	89100019	A->G	-	ENSG00000240864	IGKV1-16	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.241379
1	89133387	A->G	-	ENSG00000213512	GBP7	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	1
2	89213713	A->G	-	ENSG00000244575	IGKV1-27	IG_V_gene	CDS	missense_variant	p.Arg->Gly	Alu	0.0555556
16	89687638	A->G	+	ENSG00000185324	CDK10	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.5
16	89889232	A->G	+	ENSG00000141002	TCF25	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.3
2	90083143	A->G	+	ENSG00000242766	IGKV1D-17	IG_V_gene	CDS	missense_variant	p.His->Arg	Alu	0.75
10	90902279	A->G	+	ENSG00000148688	RPP30	protein_coding	CDS	missense_variant	p.His->Arg	Alu	0.0909091
1	93158861	A->G	-	ENSG00000117500	TMED5	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.222222
2	95899172	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Lys->Glu	Alu	0.117647
2	95899186	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Asn->Ser	Alu	0.140351
2	95899211	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	exon	missense_variant	p.Ser->Gly	Alu	0.132353
2	95904765	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	synonymous_variant	p.Arg->Arg	Alu	0.264151
2	95904788	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Lys->Glu	Alu	0.297872
2	95904802	A->G	-	ENSG00000174501	ANKRD36C	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.351852
2	97208001	A->G	+	ENSG00000135976	ANKRD36	protein_coding	CDS	missense_variant	p.Lys->Arg	Alu	0.2
10	97664918	A->G	+	ENSG00000249967	AL355315.1	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.0625
7	99493532	A->G	-	ENSG00000160908	ZNF394	protein_coding	three_prime_utr	synonymous_variant	p.Leu->Leu	Alu	0.0383387
1	99974997	A->G	+	ENSG00000117620	SLC35A3	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.2
10	100924268	A->G	+	ENSG00000119906	SLF2	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0555556
X	101042284	A->G	-	ENSG00000188917	TRMT2B	protein_coding	CDS	synonymous_variant	p.Ala->Ala	Alu	0.0681818
8	102829408	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.178322
8	102829409	A->G	-	ENSG00000155096	AZIN1	protein_coding	CDS	synonymous_variant	p.Glu->Glu	Alu	0.0622837
14	105986984	A->G	-	ENSG00000211934	IGHV1-2	IG_V_gene	CDS	synonymous_variant	p.Ala->Ala	Alu	0.0769231
14	106153691	A->G	-	ENSG00000211943	IGHV3-15	IG_V_gene	CDS	missense_variant	p.Lys->Arg	Alu	0.075
14	106153713	A->G	-	ENSG00000211943	IGHV3-15	IG_V_gene	CDS	missense_variant	p.Thr->Ala	Alu	0.0666667
14	106185300	A->G	-	ENSG00000211945	IGHV1-18	IG_V_gene	CDS	synonymous_variant	p.Ala->Ala	Alu	0.0652174
14	106537949	A->G	-	ENSG00000211964	IGHV3-48	IG_V_gene	CDS	missense_variant	p.Ser->Gly	Alu	0.206897
14	106627638	A->G	-	ENSG00000224373	IGHV4-59	IG_V_gene	CDS	missense_variant	p.Arg->Gly	Alu	0.0625
14	106810486	A->G	-	ENSG00000224650	IGHV3-74	IG_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.176471
5	115840570	A->G	-	ENSG00000145782	ATG12	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.2
8	123514280	A->G	-	ENSG00000156804	FBXO32	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.576271
10	124762463	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.0714286
10	124762529	A->G	-	ENSG00000258539	AC068896.1	protein_coding	exon	missense_variant	p.Thr->Ala	Alu	0.122449
7	128502644	A->G	+	ENSG00000165055	METTL2B	protein_coding	exon	missense_variant	p.Ile->Val	Alu	0.176471
7	128502689	A->G	+	ENSG00000165055	METTL2B	protein_coding	exon	missense_variant	p.Arg->Gly	Alu	0.222222
10	131911600	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.474227
5	133019133	A->G	-	ENSG00000155329	ZCCHC10	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.0909091
5	133019139	A->G	-	ENSG00000155329	ZCCHC10	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0740741
10	133297322	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	splice_region_variant&synonymous_variant	p.Pro->Pro	Alu	0.133333
10	133297335	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.444444
10	133297336	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.222222
10	133297389	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Asn->Ser	Alu	0.142857
10	133297396	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	CDS	missense_variant	p.Arg->Gly	Alu	0.2
2	135747738	A->G	+	ENSG00000144224	UBXN4	protein_coding	CDS	missense_variant	p.Asn->Asp	Alu	0.153846
7	140095660	A->G	-	ENSG00000006459	KDM7A	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.142857
7	142529491	A->G	+	ENSG00000278030	TRBV7-9	TR_V_gene	CDS	missense_variant	p.Asn->Asp	Alu	0.486111
7	142801067	A->G	+	ENSG00000211772	TRBC2	TR_C_gene	CDS	missense_variant	p.Lys->Glu	Alu	1
5	144169846	A->G	-	ENSG00000145817	YIPF5	protein_coding	Intergenic	missense_variant&splice_region_variant	p.Lys->Arg	Alu	0.0652174
1	150308218	A->G	+	ENSG00000266472	MRPS21	protein_coding	CDS	missense_variant	p.Gln->Arg	Alu	0.550898
1	150748166	A->G	-	ENSG00000163131	CTSS	protein_coding	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.181818
1	150748168	A->G	-	ENSG00000163131	CTSS	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
1	150748178	A->G	-	ENSG00000163131	CTSS	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.2
X	154011115	A->G	-	ENSG00000184216	IRAK1	protein_coding	exon	missense_variant&splice_region_variant	p.Gln->Arg	Alu	0.0531401
X	156023093	A->G	+	ENSG00000182484	WASH6P	transcribed_unprocessed_pseudogene	Intron	downstream_gene_variant	.	Alu	0.8
5	157213568	A->G	+	ENSG00000253980	AC010609.1	antisense	CDS	splice_region_variant&non_coding_transcript_exon_variant	.	Alu	0.363636
5	157213570	A->G	+	ENSG00000253980	AC010609.1	antisense	CDS	non_coding_transcript_exon_variant	.	Alu	0.416667
1	160332454	A->G	-	ENSG00000122218	COPA	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.0823529
1	171545659	A->G	+	ENSG00000117523	PRRC2C	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.391304
4	177353680	A->G	+	ENSG00000249084	AC027627.1	antisense	exon	missense_variant	p.Gln->Arg	Alu	0.480769
4	189957425	A->G	+	ENSG00000109536	FRG1	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.983871
3	196060604	A->G	-	ENSG00000072274	TFRC	protein_coding	Intron	non_coding_transcript_exon_variant	.	Alu	0.0869565
2	200885335	A->G	-	ENSG00000240344	PPIL3	protein_coding	CDS	synonymous_variant	p.Val->Val	Alu	0.210526
2	201154148	A->G	+	ENSG00000003402	CFLAR	protein_coding	CDS	missense_variant	p.Met->Val	Alu	0.0952381
1	204469408	A->G	-	ENSG00000133056	PIK3C2B	protein_coding	CDS	missense_variant	p.Asp->Gly	Alu	0.545455
2	218385460	A->G	+	ENSG00000018280	SLC11A1	protein_coding	exon	non_coding_transcript_exon_variant	.	Alu	0.110656
2	218574009	A->G	+	ENSG00000144580	CNOT9	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.181818
1	225786879	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Leu->Leu	Alu	0.454545
1	225786898	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.0882353
1	225786910	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Val	Alu	0.0555556
1	225786912	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ile->Met	Alu	0.611111
1	225786942	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.142857
1	225786943	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	missense_variant	p.Ser->Gly	Alu	0.172414
1	225786960	A->G	+	ENSG00000143742	SRP9	protein_coding	CDS	synonymous_variant	p.Ser->Ser	Alu	0.0857143
2	229262716	A->G	-	ENSG00000153823	PID1	protein_coding	CDS	synonymous_variant	p.Gln->Gln	Alu	0.1
2	241324567	A->G	+	ENSG00000168385	2-Sep	protein_coding	CDS	non_coding_transcript_exon_variant	.	Alu	0.153846
1	247100417	A->G	-	ENSG00000188295	ZNF669	protein_coding	CDS	missense_variant	p.Tyr->Cys	Alu	0.028169
19	57864892	A->G	+	ENSG00000204514	ZNF814	protein_coding	exon	.	.	Alu	0.34375
19	57864915	A->G	+	ENSG00000204514	ZNF814	protein_coding	exon	.	.	Alu	0.0869565
19	2291932	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.0869565
19	2291978	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.214286
19	2292005	A->G	+	ENSG00000220008	LINGO3	protein_coding	five_prime_utr	.	.	Alu	0.111111
19	3540017	A->G	-	ENSG00000183397	C19orf71	protein_coding	five_prime_utr	.	.	Alu	0.181818
19	3540034	A->G	-	ENSG00000183397	C19orf71	protein_coding	five_prime_utr	.	.	Alu	0.2
17	5487612	A->G	+	ENSG00000167842	MIS12	protein_coding	five_prime_utr	.	.	Alu	0.2
10	16437386	A->G	+	ENSG00000165983	PTER	protein_coding	five_prime_utr	.	.	Alu	0.208333
19	37324855	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.142857
19	37324876	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.307692
21	37410645	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.272727
21	37410657	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.266667
19	44662395	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.2
19	44662397	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.125
16	57174194	A->G	-	ENSG00000172775	FAM192A	protein_coding	five_prime_utr	.	.	Alu	0.181818
7	66740125	A->G	-	ENSG00000284461	AC027644.4	protein_coding	five_prime_utr	.	.	Alu	0.142857
10	72220101	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.24
10	72220110	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0666667
10	72220134	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0434783
10	72220174	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0344828
10	72220179	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0526316
10	72220182	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0925926
10	72220186	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0566038
10	72220209	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0327869
10	72220218	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0338983
10	72220232	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.030303
10	72220235	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0434783
10	72220241	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.027027
10	72220248	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.389831
10	72220261	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.323077
14	92118891	A->G	-	ENSG00000183648	NDUFB1	protein_coding	five_prime_utr	.	.	Alu	0.454545
2	99156350	A->G	+	ENSG00000144182	LIPT1	protein_coding	five_prime_utr	.	.	Alu	0.117647
8	143590731	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.142857
3	179325052	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.09375
3	179325122	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0363636
3	179325188	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.0454545
3	179325235	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.104478
3	179325282	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.025974
1	179877296	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	five_prime_utr	.	.	Alu	0.0280374
4	126965	A->G	+	ENSG00000250312	ZNF718	protein_coding	Intergenic	.	.	Alu	0.4
9	277228	A->G	+	ENSG00000107099	DOCK8	protein_coding	Intergenic	.	.	Alu	0.7
X	303836	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	303849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	303972	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
X	303982	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
X	304042	A->G	-	.	.	.	Intergenic	.	.	Alu	0.727273
X	304058	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	304085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.238095
X	304088	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
19	1033450	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.307692
19	1033456	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.153846
19	1033458	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.333333
X	1383214	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
X	1383237	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1383408	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
X	1383415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	1383460	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
X	1383461	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	1383483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
X	1383515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1383524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.263158
X	1383525	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
X	1383567	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
X	1383593	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
X	1383594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
X	1383794	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	1384085	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
X	1384147	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
X	1385005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	1385006	A->G	-	.	.	.	Intergenic	.	.	Alu	0.09375
X	1385010	A->G	-	.	.	.	Intergenic	.	.	Alu	0.09375
X	1385021	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0571429
X	1385022	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
X	1385081	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
X	1385087	A->G	-	.	.	.	Intergenic	.	.	Alu	0.368421
X	1385122	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1385132	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	1385136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	1385157	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	1447733	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.454545
1	1871371	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.166667
1	1872153	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.454545
1	1881506	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.157895
1	1881672	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3
1	1881673	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.3
1	1884076	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1886300	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.333333
1	1886304	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.117647
17	2038038	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2038054	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.461538
17	2038055	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.538462
17	2038061	A->G	+	ENSG00000108963	DPH1	protein_coding	Intergenic	.	.	Alu	0.5
16	2260332	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.142857
16	2260333	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.153846
16	2260338	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.384615
19	2292026	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	2292028	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	2292030	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0833333
19	2292036	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.12
19	2292090	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.230769
19	2292097	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2292113	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.25
19	2292291	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.238095
19	2292300	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2292318	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.304348
19	2292323	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.190476
19	2292343	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0689655
19	2292350	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0740741
19	2292533	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.117647
19	2292590	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.6
19	2292594	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2292619	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.333333
19	2292687	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2292751	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.125
19	2292752	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.136364
19	2293104	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.047619
19	2293129	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.1
19	2293145	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0444444
19	2293194	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0512821
19	2293204	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.121951
19	2293206	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.255814
19	2293230	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.05
19	2293338	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.3
19	2293942	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.5
19	2293948	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.423077
19	2294034	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.06
19	2295616	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.125
4	2502882	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.363636
4	2502899	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.181818
4	2502930	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.357143
4	2502945	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0588235
17	2672241	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.545455
X	2739550	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.4
X	2744183	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
X	2744201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
X	2744230	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	2744277	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	2744278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
X	2744287	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
7	2757069	A->G	-	ENSG00000174945	AMZ1	protein_coding	Intergenic	.	.	Alu	0.666667
18	2797797	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.111111
18	2797802	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.111111
19	3181667	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
19	3181811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
2	3541908	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.205882
2	3541909	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0882353
2	3541931	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.128205
2	3541935	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.195122
2	3541936	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.05
2	3541948	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.05
2	3541961	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.378378
2	3541981	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.1
2	3541987	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0697674
2	3543851	A->G	-	ENSG00000255767	AC108488.2	protein_coding	Intergenic	.	.	Alu	0.0769231
16	3574125	A->G	-	ENSG00000167984	NLRC3	protein_coding	Intergenic	.	.	Alu	0.181818
X	3610360	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.111111
11	3698462	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.5
11	3698471	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.409091
11	3698474	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.318182
11	3698483	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.526316
11	3722209	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.363636
11	3722233	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1875
11	3722333	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1875
11	3743073	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3743108	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.181818
11	3782699	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3782707	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.272727
X	3826663	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.157895
X	3826679	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.133333
20	3912768	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.636364
11	4097029	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.0833333
11	4097166	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.210526
11	4097175	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.1
11	4097192	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.166667
11	4097254	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.384615
11	4114351	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.2
17	4713552	A->G	+	ENSG00000141480	ARRB2	protein_coding	Intergenic	.	.	Alu	0.3125
7	4787401	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.388889
17	5487171	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5601267	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5601569	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.117647
7	6475395	A->G	-	ENSG00000136240	KDELR2	protein_coding	Intergenic	.	.	Alu	0.142857
11	6711101	A->G	-	.	.	.	Intergenic	.	.	Alu	0.108696
7	6751877	A->G	+	ENSG00000187953	PMS2CL	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0952381
12	7923426	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.103448
12	7923493	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.14
12	7923558	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.075
12	7923563	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.216216
12	7923842	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.203704
12	7923906	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0487805
12	7923936	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0714286
12	7923975	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.1875
19	8477396	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.133333
12	8943153	A->G	-	ENSG00000003056	M6PR	protein_coding	Intergenic	.	.	Alu	0.307692
17	8943203	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.2
11	9172883	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.133333
11	9289125	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.8
11	9289270	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9289276	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.727273
11	9291672	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.133333
2	9507774	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.454545
2	9523999	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.307692
1	9927378	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.103448
1	9927385	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.0714286
1	9927390	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.08
1	9927412	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.192308
1	9927422	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
1	9927480	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.142857
1	9927518	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
1	9927582	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.133333
1	9927932	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.25
1	9927962	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.142857
1	9928037	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.133333
1	9928049	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.5
1	9928072	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9928080	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.153846
1	9928110	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.4
1	9928632	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.25
1	9928633	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.363636
1	9928634	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.363636
1	9928660	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
1	9928691	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.26087
1	9928702	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.2
1	9928764	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.117647
1	9928768	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.125
1	9928776	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.166667
12	10120820	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.16
12	10120860	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.117647
12	10120891	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.2
12	10129821	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.0588235
3	10152222	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	10152248	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
3	10152249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0930233
3	10152265	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
3	10152284	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
3	10152294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.278689
3	10152310	A->G	+	.	.	.	Intergenic	.	.	Alu	0.313433
3	10152314	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0273973
3	10152321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.168831
3	10152326	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
3	10152351	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0273973
3	10152356	A->G	+	.	.	.	Intergenic	.	.	Alu	0.253165
3	10152557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
3	10152567	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
3	10152570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
3	10152573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0888889
3	10152587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.122449
3	10152592	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0816327
3	10152593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.32
3	10152622	A->G	+	.	.	.	Intergenic	.	.	Alu	0.27451
3	10152632	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
3	10152645	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0930233
3	10152658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0731707
3	10152659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.113636
3	10152672	A->G	+	.	.	.	Intergenic	.	.	Alu	0.314286
3	10152689	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
3	10152721	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
3	10152737	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	10152752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
3	10152764	A->G	+	.	.	.	Intergenic	.	.	Alu	0.555556
3	10152866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0892857
3	10152871	A->G	+	.	.	.	Intergenic	.	.	Alu	0.410714
3	10152887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.104167
3	10152888	A->G	+	.	.	.	Intergenic	.	.	Alu	0.102041
3	10152906	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
3	10152909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173077
3	10152910	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
3	10152933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0877193
3	10152941	A->G	+	.	.	.	Intergenic	.	.	Alu	0.037037
3	10152942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.132075
3	10152957	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	10152965	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0377358
3	10152990	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
3	10153021	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
3	10153022	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
3	10153044	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10153057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
3	10153065	A->G	+	.	.	.	Intergenic	.	.	Alu	0.21875
3	10153069	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
3	10153100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.444444
3	10153127	A->G	+	.	.	.	Intergenic	.	.	Alu	0.225
3	10153128	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
3	10153131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10153157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	10153167	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
3	10153184	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0344828
3	10153199	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0983607
3	10153206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162162
3	10153219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0481928
3	10153238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0277778
3	10153249	A->G	+	.	.	.	Intergenic	.	.	Alu	0.202703
3	10153260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0307692
3	10153262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
3	10153266	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0806452
3	10153294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.031746
3	10153298	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0307692
3	10153299	A->G	+	.	.	.	Intergenic	.	.	Alu	0.109375
3	10153300	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0677966
3	10153301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0508475
3	10153304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.116667
3	10153350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0816327
3	10153370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
3	10153378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0851064
3	10153379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
3	10153381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
3	10153384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.227273
3	10153386	A->G	+	.	.	.	Intergenic	.	.	Alu	0.155556
3	10153408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
3	10153409	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
3	10153411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.139535
3	10153412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.386364
3	10153419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
5	10368680	A->G	+	ENSG00000145495	6-Mar	protein_coding	Intergenic	.	.	Alu	0.2
19	10723977	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.166667
19	10930619	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.117647
19	10930632	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.105263
19	10930855	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.190476
19	10930979	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.133333
19	10933063	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.214286
19	10933092	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.230769
19	11450009	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.333333
19	11450010	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.142857
19	11450020	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.384615
19	11450217	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.9
19	11450218	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.7
19	11450426	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.5
19	11450427	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intergenic	.	.	Alu	0.235294
16	11575949	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0689655
16	11575954	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0714286
16	11889056	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.12
16	11889074	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.24
16	11889104	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0909091
16	11889844	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.2
19	12625547	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.333333
19	12625962	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.117647
19	12733175	A->G	-	ENSG00000123144	TRIR	protein_coding	Intergenic	.	.	Alu	0.111111
19	12746961	A->G	+	ENSG00000198356	ASNA1	protein_coding	Intergenic	.	.	Alu	0.2
19	12746965	A->G	+	ENSG00000198356	ASNA1	protein_coding	Intergenic	.	.	Alu	0.4
19	12941191	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0727273
19	12941878	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.05
11	13703789	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.166667
11	13703867	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.15
11	13703868	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.15
11	13703915	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.25
11	13703924	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.409091
11	13703959	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
11	13703964	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.230769
11	13703989	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.105263
11	13703999	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.25
11	13704026	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.125
11	13704027	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.2
19	13759732	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.105263
19	13837503	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
19	13837515	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
19	13837543	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
19	13837702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0652174
19	13837703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0210526
19	13837902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0757576
19	13838020	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0535714
19	13838025	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	13838162	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0636364
19	13838166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0982143
19	13838188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.145833
19	13838189	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0206186
19	13838197	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0597015
19	13838286	A->G	-	.	.	.	Intergenic	.	.	Alu	0.030303
19	13838291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0752688
19	13838300	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0263158
19	13838303	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0495868
19	13838304	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0325203
19	13838380	A->G	-	.	.	.	Intergenic	.	.	Alu	0.359223
19	13838386	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
19	13838492	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
6	14121360	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.564356
6	14121399	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0252101
6	14121411	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0245902
6	14121412	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0583333
6	14121438	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.343137
6	14121439	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.215686
6	14121445	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0566038
6	14121525	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0735294
6	14121565	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.04
6	14121570	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.12
19	14389012	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
11	14478698	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.222222
5	14715196	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.545455
10	14905728	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.416667
10	14907007	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.0689655
6	15254854	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.1875
6	15254922	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.153846
6	15254931	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.148148
19	15258702	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.307692
19	15463388	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.2
16	15700516	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.307692
19	16080601	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0306122
19	16080625	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0222222
19	16080628	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0897436
19	16080691	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.117647
19	16080692	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.141176
19	16080741	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.05
19	16080744	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0229885
19	16080753	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0444444
19	16080759	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0595238
19	16080764	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0941176
19	16082907	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.097561
19	16082918	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0925926
19	16083257	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.102564
19	16083258	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16083297	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.08
19	16083323	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.125
19	16083324	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.352941
19	16083333	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0392157
19	16083367	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0392157
19	16083395	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.109091
19	16083396	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.109091
19	16083425	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.109375
19	16083426	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0615385
19	16083428	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.046875
19	16084068	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.195122
19	16084109	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.305085
19	16085168	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.411765
19	16085194	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.105263
19	16085208	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.333333
19	16085318	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.107143
19	16085353	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.107143
19	16085354	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.157895
19	16086010	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0588235
19	16086024	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0689655
19	16150464	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.384615
19	16156090	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.2
19	16156092	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.3125
19	16156098	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.2
19	16156176	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.0909091
19	16156231	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.15
19	16156420	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16156445	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.12
19	16156732	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.166667
19	16156787	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.136364
17	16383008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
17	16383275	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
17	16383291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	16637391	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.2
19	16637423	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16637449	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16640270	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intergenic	.	.	Alu	0.153846
19	16642401	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16642409	A->G	-	ENSG00000268790	AC008764.4	protein_coding	Intergenic	.	.	Alu	0.153846
11	16740489	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.148148
11	16740502	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.181818
11	16740550	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0666667
11	16740562	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0645161
11	16740578	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.352941
11	16740587	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.157895
11	16740696	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.258065
11	16740927	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0714286
11	16740949	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.117647
11	16740950	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.125
11	16740962	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.384615
11	16756374	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.181818
11	16756395	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.454545
11	16756435	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.166667
11	16756436	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.346154
11	16756451	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.266667
11	16756454	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0666667
11	16756468	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.178571
11	16756476	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.9
11	16756530	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.612903
11	16756531	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.8125
11	16756647	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.666667
11	16756654	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.222222
11	16756722	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.5
11	16756723	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.52381
11	17076686	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.128205
19	17095092	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.230769
19	17098671	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.111111
19	17098674	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17098700	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.111111
19	17103794	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.25
19	17103807	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.230769
11	17131554	A->G	-	ENSG00000011405	PIK3C2A	protein_coding	Intergenic	.	.	Alu	0.2
10	17687201	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0714286
10	17687219	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.958333
10	17687220	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.875
10	17687316	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.166667
10	17687322	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.25
10	17687328	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.181818
10	17687336	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.583333
10	17687354	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.266667
10	17687378	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.75
10	17687404	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.166667
10	17687471	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0461538
17	18271837	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.4
17	18272722	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.181818
17	18272753	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.454545
17	18272776	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.384615
19	18276129	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
19	18276166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.108108
11	18333720	A->G	+	ENSG00000110768	GTF2H1	protein_coding	Intergenic	.	.	Alu	0.15
11	18333987	A->G	+	ENSG00000110768	GTF2H1	protein_coding	Intergenic	.	.	Alu	0.102041
11	18406531	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.0645161
11	18406596	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.129032
11	18520782	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.285714
11	18521466	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.142857
11	18521471	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.133333
11	18523121	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.269231
19	18908173	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.176471
19	18908187	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.4
19	18908188	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.2
19	18908681	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.214286
19	18908849	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.214286
19	18908850	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.214286
19	18909587	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0769231
19	18909604	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0714286
19	18909615	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.233333
19	18909616	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.133333
19	18909624	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.1
19	18909630	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0967742
19	18909714	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0666667
19	18909786	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.285714
19	18910473	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.111111
3	19952093	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.27
2	20345135	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.117647
22	20562103	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.117647
19	20641644	A->G	-	ENSG00000188171	ZNF626	protein_coding	Intergenic	.	.	Alu	0.642857
19	20642413	A->G	-	ENSG00000188171	ZNF626	protein_coding	Intergenic	.	.	Alu	0.25
1	20647972	A->G	-	ENSG00000158828	PINK1	protein_coding	Intergenic	.	.	Alu	0.166667
1	20755311	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.482759
1	20755323	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.130435
1	20755324	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	20755333	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.16
1	20755347	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.227273
1	20755350	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20755463	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	20755465	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	20755489	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20755492	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	20755544	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.263158
1	20755549	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.222222
1	20755561	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.388889
1	20755569	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.555556
1	20756758	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.636364
1	20756781	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.0869565
1	20756783	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.304348
1	20756812	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.294118
1	20756818	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.1
1	20756844	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.190476
1	20756847	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.304348
1	20756889	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.125
1	20756912	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.6
16	21518154	A->G	-	ENSG00000180747	SMG1P3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
16	22310674	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.214286
16	22310680	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.142857
16	22310681	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.214286
16	22310741	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.0952381
16	22310758	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.105263
16	22310764	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.105263
16	22310842	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.25
14	22908113	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.2
14	22908137	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.166667
14	22908509	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.3
14	22916133	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.142857
14	22916154	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.272727
14	22916164	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.0833333
14	22916354	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.296296
14	22916377	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.0714286
14	22916408	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.541667
14	23096297	A->G	+	ENSG00000179933	C14orf119	protein_coding	Intergenic	.	.	Alu	0.166667
8	23187433	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
8	23187501	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
16	23462484	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
14	24170152	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
14	24170153	A->G	+	.	.	.	Intergenic	.	.	Alu	0.391304
14	24170182	A->G	+	.	.	.	Intergenic	.	.	Alu	0.192308
14	24170956	A->G	+	.	.	.	Intergenic	.	.	Alu	0.227273
14	24170976	A->G	+	.	.	.	Intergenic	.	.	Alu	0.259259
14	24170977	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
14	24171039	A->G	+	.	.	.	Intergenic	.	.	Alu	0.521739
14	24171040	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
14	24171058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
14	24171078	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3125
22	24573003	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.15
22	24573021	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.5
22	24573057	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.166667
22	24573093	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.105263
22	24573096	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.136364
22	24573119	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.24
22	24573124	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.387097
22	24573191	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.222222
22	24573192	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0555556
22	24573655	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.09375
22	24573660	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.258065
22	24573661	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.1875
22	24573702	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0571429
22	24573798	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.125
22	24573801	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0740741
22	24573814	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0869565
22	24573832	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.136364
22	24573833	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0909091
22	24574574	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.357143
22	24574602	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0869565
22	24574608	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.190476
22	24574641	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.5
22	24574654	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.333333
22	24574671	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.15
22	24574675	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.227273
22	24574703	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.09375
22	24574708	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0625
22	24574742	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.307692
22	24574752	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.325
22	24574776	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.108696
22	24574777	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0851064
6	24710358	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.047619
6	24710363	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.119048
4	25279889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
4	25279905	A->G	+	.	.	.	Intergenic	.	.	Alu	1
13	25306282	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.0869565
13	25306284	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.181818
13	25306373	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.142857
1	25437841	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.1875
1	25456173	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.368421
12	27035169	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.142857
10	27125779	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.2
10	27125805	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.272727
10	27125818	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.142857
10	27125821	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.5
17	27298045	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.157895
17	27298046	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.210526
13	27652607	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.166667
13	27652613	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.416667
13	27652616	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.461538
13	27652621	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.153846
13	27653168	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.545455
1	27880448	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.236842
1	27880460	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.130435
1	27880598	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0759494
1	27880607	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.311475
1	27881401	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.363636
1	27881433	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0888889
1	27881434	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.244444
10	28525594	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.24
10	28525595	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.64
10	28525686	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.714286
10	28525726	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.611111
10	28525729	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.411765
10	28525742	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.0869565
10	28525763	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.736842
10	28538406	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.1875
10	28538471	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.125
10	28538474	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.117647
10	28538497	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.111111
10	28538708	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0952381
10	28539638	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.172414
10	28539639	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.0689655
10	28539659	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.08
17	28667250	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.6
17	28667256	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.181818
17	28722058	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.0952381
17	28722068	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.333333
17	28722100	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.1
17	28722353	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intergenic	.	.	Alu	0.2
2	28764870	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28764871	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.105263
2	28784662	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.133333
2	28784733	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0909091
2	28784773	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.193548
2	28784800	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28784809	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0526316
2	28784813	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0526316
2	28784814	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0512821
2	28784840	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0512821
2	28786188	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0967742
2	28786214	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.230769
2	28786654	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.181818
2	28788932	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.189189
2	28788938	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.236842
2	28788957	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.166667
2	28788997	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0392157
2	28790159	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0307692
22	28797530	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	28798551	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.142857
22	28798829	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.08
22	28798863	A->G	-	ENSG00000100219	XBP1	protein_coding	Intergenic	.	.	Alu	0.115385
16	28831469	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.230769
1	29177420	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0769231
1	29177561	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0526316
22	29287325	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.0434783
22	29287369	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.2
22	29287944	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.166667
17	29755800	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
8	30101520	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.235294
8	30101533	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.105263
8	30178244	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.25
8	30178299	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.142857
8	30178316	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.266667
13	30356679	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.25
13	30356688	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intergenic	.	.	Alu	0.4
22	30660936	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.3
22	30660981	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.15
22	30660991	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	30752978	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.0869565
16	31121174	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.047619
16	31121250	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0416667
16	31121254	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.142857
16	31121266	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0638298
16	31121881	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0869565
16	31121913	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0625
16	31121965	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0882353
16	31122003	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.28
16	31122025	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0882353
16	31122624	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.363636
16	31122625	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.454545
16	31122692	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.133333
16	31122694	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.133333
16	31122702	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31122707	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.133333
16	31122734	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.285714
16	31122754	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31122760	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.461538
16	31122766	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.214286
16	31122802	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.363636
16	31123036	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.25
16	31123240	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31123286	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.428571
16	31123310	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.294118
16	31123317	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.111111
16	31123343	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.111111
16	31123356	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.210526
16	31123382	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.666667
16	31123383	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.210526
16	31123443	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.315789
16	31123470	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.3125
16	31123471	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.375
16	31123483	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.411765
16	31123528	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1
16	31123530	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.35
16	31123538	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0952381
16	31123560	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1
16	31123581	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0909091
16	31123632	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.1
16	31123641	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31123646	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.181818
16	31123648	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.0909091
14	31137664	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.2
16	31358557	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.131148
16	31364161	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0657895
16	31364168	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0405405
16	31364274	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0740741
16	31364277	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0392157
18	32047916	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.137931
18	32047981	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.125
18	32058035	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.28
5	32165120	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.272727
2	32300146	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.4
2	32396823	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.5
2	32507253	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0789474
2	32507254	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.105263
5	32588763	A->G	+	ENSG00000113387	SUB1	protein_coding	Intergenic	.	.	Alu	0.263158
9	33027432	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.1
9	33037472	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.153846
9	33037632	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.210526
6	33307470	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.2
11	33342063	A->G	+	ENSG00000110422	HIPK3	protein_coding	Intergenic	.	.	Alu	0.181818
21	33348728	A->G	+	ENSG00000142166	IFNAR1	protein_coding	Intergenic	.	.	Alu	0.0512821
21	33404873	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.08
21	33405012	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.133333
21	33405973	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.227273
19	34471436	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	34472008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	34472011	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
14	34537155	A->G	-	ENSG00000129518	EAPP	protein_coding	Intergenic	.	.	Alu	0.166667
14	34801389	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.636364
15	34950361	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.2
20	35032952	A->G	-	ENSG00000100991	TRPC4AP	protein_coding	Intergenic	.	.	Alu	0.4
14	35109728	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.125
14	35109729	A->G	-	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.285714
19	35770085	A->G	+	ENSG00000167595	PROSER3	protein_coding	Intergenic	.	.	Alu	0.2
20	35821585	A->G	+	ENSG00000025293	PHF20	protein_coding	Intergenic	.	.	Alu	0.363636
17	35827189	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.2
17	35827215	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.7
17	35827518	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.272727
17	35827585	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.272727
17	35827586	A->G	+	ENSG00000270647	TAF15	protein_coding	Intergenic	.	.	Alu	0.25
7	35888777	A->G	+	ENSG00000122545	7-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
18	36019783	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.363636
18	36019788	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.181818
9	36153043	A->G	+	ENSG00000122694	GLIPR2	protein_coding	Intergenic	.	.	Alu	0.142857
1	36235993	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.363636
1	36235994	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.272727
22	36315916	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.125
22	36375806	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.285714
22	36375820	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.272727
6	36450259	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.1
6	36458645	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.3
6	36458908	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.142857
1	36476745	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0576923
1	36476768	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0652174
1	36476825	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.1
1	36476916	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0769231
1	36476919	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.111111
1	36477832	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.8
1	36477851	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.133333
1	36477856	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.428571
1	36477870	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.454545
1	36477887	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.142857
1	36477897	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.125
1	36477959	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.473684
1	36478783	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.1875
1	36478845	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.818182
7	36538152	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.5
7	36538159	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.230769
6	36541894	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.26087
6	36541914	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.25
6	36541925	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0769231
6	36541926	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0769231
6	36541934	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.103448
6	36541944	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0769231
6	36541957	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0909091
6	36541960	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0909091
6	36541993	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.428571
6	36542048	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.117647
6	36542061	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.4
6	36542086	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.3
20	36913905	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.176471
20	36913918	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.111111
21	37427130	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.6
21	37427131	A->G	+	ENSG00000157540	DYRK1A	protein_coding	Intergenic	.	.	Alu	0.6
9	37504660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	37504673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	37505695	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
9	37505723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
8	37893147	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.2
8	37893668	A->G	-	ENSG00000156675	RAB11FIP1	protein_coding	Intergenic	.	.	Alu	0.3
10	38022492	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.142857
10	38022495	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.153846
10	38022599	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.2
10	38023026	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.230769
10	38023063	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.272727
10	38023220	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.166667
22	38695576	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.125
22	38695646	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.588235
22	38695902	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.411765
22	38695973	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.216216
22	38711660	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.333333
22	38711722	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.0740741
22	38711723	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.222222
20	38818985	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.181818
19	38844946	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.0909091
19	38844997	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.147059
19	38844999	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.147059
19	38845162	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.112903
19	38845175	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intergenic	.	.	Alu	0.177778
19	38897621	A->G	-	ENSG00000068903	SIRT2	protein_coding	Intergenic	.	.	Alu	0.1
8	38939904	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.263158
2	39052896	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.166667
2	39052907	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.266667
2	39052908	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.344828
2	39052909	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.172414
2	39054066	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.1
2	39054199	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	39054200	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.181818
2	39054208	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.0967742
14	39178439	A->G	+	ENSG00000100941	PNN	protein_coding	Intergenic	.	.	Alu	0.1875
3	39409942	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.0434783
3	39409949	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.1
4	39896574	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.2
1	40377052	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.25
1	40377053	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.266667
1	40377104	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.193548
1	40377214	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.157895
22	40955334	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.25
13	41011716	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0645161
13	41012623	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	41012664	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.103448
13	41012757	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	41040659	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.25
19	41266493	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.173913
19	41313796	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	41314214	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.125
19	41314907	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	41329866	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.2
19	41329975	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0689655
19	41329978	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.225806
19	41329990	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.09375
19	41330069	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.142857
22	41638575	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.2
4	41940688	A->G	+	ENSG00000109133	TMEM33	protein_coding	Intergenic	.	.	Alu	0.214286
2	42259167	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
8	42532118	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.2
8	42533581	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.176471
8	42533582	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.117647
8	42533756	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.6
6	42940301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	42940304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
6	42940305	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
6	42941682	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.4
6	42941916	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.357143
6	42942346	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.153846
6	42942358	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1875
6	42942373	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.238095
6	42942385	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.904762
6	42942480	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.923077
6	42942481	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.923077
6	42943148	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.352941
6	42943158	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.157895
6	42943175	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.125
6	42943193	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.105263
6	42943240	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.190476
6	42943241	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	43029649	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.4
6	43029665	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.2
6	43029674	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.615385
6	43029679	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.5
6	43029700	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.266667
6	43029705	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.142857
6	43029706	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.153846
6	43029725	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.818182
6	43029726	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.916667
6	43029755	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.117647
6	43029800	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.318182
6	43029803	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.181818
6	43029809	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.285714
6	43029820	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.263158
6	43029840	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.5
6	43029841	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.105263
6	43029855	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.176471
6	43029872	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.307692
6	43029881	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.142857
6	43029882	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.178571
6	43030309	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0952381
6	43030310	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0869565
6	43030457	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.470588
6	43030476	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.333333
6	43030496	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.333333
6	43030509	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.176471
6	43030514	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.176471
6	43030757	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.111111
6	43030761	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.235294
6	43031285	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.3
6	43031295	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.363636
5	43128775	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.133333
5	43128851	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.153846
5	43129340	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.117647
10	43141124	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.25
10	43141130	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.307692
10	43141477	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.181818
10	43141489	A->G	+	ENSG00000169826	CSGALNACT2	protein_coding	Intergenic	.	.	Alu	0.285714
8	43148939	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.3
8	43152170	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.133333
8	43152173	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.125
8	43152176	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.133333
8	43152211	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.333333
20	43467306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
20	43467317	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
20	43467395	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	43616339	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.2
6	43616442	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.117647
6	43616469	A->G	+	ENSG00000172432	GTPBP2	protein_coding	Intergenic	.	.	Alu	0.133333
19	43659412	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.131579
19	43661561	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0666667
1	43676581	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.230769
20	44515789	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.307692
1	44816193	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
5	44816441	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.230769
7	44831045	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0727273
7	44832684	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.029703
7	44832686	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0215054
7	44832701	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.336735
7	44832704	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.175258
7	44832706	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0204082
7	44832777	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0298507
7	44832810	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0487805
7	44832820	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.340426
7	44832822	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.104167
7	44832828	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.163265
7	44832838	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.186047
7	44832855	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0930233
7	44832867	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.264151
7	44832874	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.4
7	44832881	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44832888	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.118644
7	44832893	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0322581
7	44832903	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0344828
7	44832906	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.245902
7	44832912	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.031746
7	44832918	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0508475
7	44833090	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.111111
7	44833102	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0681818
7	44833115	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.151163
7	44833133	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.195652
7	44833140	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0581395
7	44833145	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0804598
7	44833228	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.391753
7	44833263	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1625
7	44833264	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.05
7	44833280	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0246914
7	44833300	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.363636
7	44833305	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0677966
7	44833329	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.190476
7	44833330	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.170213
7	44833371	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.538462
7	44833397	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.297297
7	44833402	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.05
7	44833404	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.25641
7	44833453	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.18
7	44833460	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0869565
7	44833499	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0384615
7	44833507	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.25
7	44833508	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0384615
7	44833578	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.107143
7	44833615	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0289855
7	44833623	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0779221
7	44834921	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0769231
7	44838076	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	44838082	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.4
7	44838148	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	44838174	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.333333
7	44838201	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.384615
7	44838558	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.4
7	44838566	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.526316
7	44838567	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.277778
19	45006304	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0833333
19	45006305	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.16
19	45006334	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45006799	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.363636
19	45006803	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45012534	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45012582	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45012585	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45012629	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45012682	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.115385
19	45012785	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.173913
19	45012975	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45013350	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45013361	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.277778
19	45013375	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45013376	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.315789
19	45013781	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45015501	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.538462
19	45015588	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45065259	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.307692
17	45215505	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.230769
17	45217631	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.416667
17	45218005	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.111111
17	45218075	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.166667
17	45505605	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
17	45505641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.538462
17	45505642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.615385
17	45506007	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
17	45506051	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	45506133	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
17	45506631	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
17	45506636	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
17	45506702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
1	45656889	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
12	45957927	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.0714286
11	46625086	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.153846
22	46733487	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.181818
22	46733488	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.0909091
22	46733489	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.136364
22	46733566	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.153846
22	46733573	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.214286
11	47170107	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.222222
11	47367896	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.272727
11	47367962	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.142857
11	47367981	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.416667
11	47368253	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.266667
11	47368256	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.133333
11	47765958	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.133333
19	48328940	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0847458
19	48328957	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.129032
19	48329077	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.04
X	48580668	A->G	+	ENSG00000228343	AC115618.2	antisense	Intergenic	.	.	Alu	0.363636
12	48664787	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	48664788	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.166667
19	48924164	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
13	48990682	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.176471
3	49010444	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.142857
3	49069752	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.307692
3	49321596	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49321605	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.25
3	49321606	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.363636
3	49321632	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.818182
3	49321657	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
18	49389787	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.538462
3	50097275	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.307692
3	50099022	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0869565
3	50099093	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1
3	50099148	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.136364
3	50099180	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0714286
3	50099188	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.148148
3	50111451	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.119048
3	50111481	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.15625
3	50111523	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0882353
3	50111542	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0666667
3	50111642	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.047619
3	50111648	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0454545
3	50112155	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.125
3	50112221	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50112269	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50112295	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.352941
3	50112305	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	50112360	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.5
3	50112361	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.125
14	50115249	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.266667
14	50115290	A->G	-	ENSG00000100483	VCPKMT	protein_coding	Intergenic	.	.	Alu	0.307692
3	50333699	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.156863
3	50333726	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.210526
3	50335086	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.117647
3	50335518	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0677966
3	50335528	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0338983
3	50335662	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0714286
3	50335807	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0350877
3	50335809	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0714286
5	50413589	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.2
5	50413652	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.166667
22	50539964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
22	50540019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
20	50588961	A->G	+	ENSG00000042062	RIPOR3	protein_coding	Intergenic	.	.	Alu	0.307692
16	50674498	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.190476
17	50730368	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.181818
17	50730450	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.230769
17	50730464	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.285714
17	50730465	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.142857
17	51027214	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.384615
17	51027215	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51027229	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.181818
17	51027324	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51027349	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.428571
8	51855941	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.933333
19	52193650	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.133333
19	52193670	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.1875
19	52193703	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.375
19	52193750	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.4
19	52194034	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.285714
13	52629968	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
13	52630356	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
13	52630404	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
13	52630414	A->G	+	ENSG00000250299	MRPS31P4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.466667
19	52642991	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.6
19	52702547	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	52702582	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
8	52706866	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.4
8	52706904	A->G	-	ENSG00000023287	RB1CC1	protein_coding	Intergenic	.	.	Alu	0.2
16	53439852	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.4
3	53866262	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
3	53866284	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
3	53866301	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
3	53866375	A->G	-	.	.	.	Intergenic	.	.	Alu	0.6
8	53993200	A->G	-	ENSG00000187735	TCEA1	protein_coding	Intergenic	.	.	Alu	0.272727
8	54081585	A->G	-	ENSG00000120992	LYPLA1	protein_coding	Intergenic	.	.	Alu	0.2
19	54097686	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.157895
19	54097692	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54202945	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0243902
19	54202950	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0454545
19	54203577	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0588235
19	54203587	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0384615
19	54203703	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0333333
19	54204125	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0638298
19	54204465	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0307692
19	54204628	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.025974
19	54204648	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0344828
19	54205886	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0869565
19	54216264	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.121212
19	54238053	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.15
19	54238063	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.12
19	54238073	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.173913
19	54238088	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0869565
19	54238153	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.133333
19	54238162	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.266667
19	54238238	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.416667
19	54238309	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.1875
X	54562102	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
X	54562110	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54562120	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
X	54562126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54562145	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54562146	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8
X	54562172	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	54562175	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54562307	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
X	54562308	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
X	54562329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
X	54562651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4375
X	54562654	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
X	54562666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
X	54562673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
X	54562686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
X	54562708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.241379
X	54562745	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
X	54562748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
X	54562750	A->G	+	.	.	.	Intergenic	.	.	Alu	0.434783
X	54562781	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
X	54563506	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
X	54563515	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54563522	A->G	+	.	.	.	Intergenic	.	.	Alu	0.131579
X	54563528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.194444
X	54563529	A->G	+	.	.	.	Intergenic	.	.	Alu	0.405405
X	54563534	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
X	54563555	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16
X	54563593	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	54563630	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
X	54563633	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
X	54563634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54563639	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
X	54563665	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
X	54563675	A->G	+	.	.	.	Intergenic	.	.	Alu	0.269231
X	54563688	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
X	54563692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
X	54563711	A->G	+	.	.	.	Intergenic	.	.	Alu	0.318182
X	54563731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.195652
X	54563765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
X	54563774	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
X	54564488	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
X	54564500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
X	54564507	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
X	54564508	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
X	54564588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
X	54564658	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54564814	A->G	+	.	.	.	Intergenic	.	.	Alu	0.444444
X	54564833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
X	54564834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54564838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
X	54564863	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
X	54564908	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
X	54564914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.26087
X	54564937	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	54564944	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	54566807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
X	54566813	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
X	54566873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
X	54566886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.625
19	54891536	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	54891602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
14	55055845	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0666667
14	55057702	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0769231
14	55058709	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.117647
14	55058712	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.3125
14	55058753	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.105263
14	55058757	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0952381
14	55058787	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0645161
14	55059383	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0666667
14	55061011	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0512821
14	55279140	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55279166	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55279183	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55281133	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.2
14	55281219	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.272727
14	55285136	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.176471
12	55787574	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	55787575	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
8	55890019	A->G	+	ENSG00000254087	LYN	protein_coding	Intergenic	.	.	Alu	0.2
7	56097999	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	57058030	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
3	57580504	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.151515
3	57580534	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.09375
3	57580863	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0833333
3	57591666	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.181818
19	57844246	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.266667
19	58313425	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.166667
19	58314449	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.166667
19	58314506	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.428571
17	58340501	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.157895
17	58340507	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.133333
17	58340523	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.0909091
17	58340547	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.192308
17	58340739	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.125
17	58340761	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.173913
17	58341891	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.166667
19	58567041	A->G	-	ENSG00000099326	MZF1	protein_coding	Intergenic	.	.	Alu	0.2
2	60904281	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.25
2	60904702	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.133333
2	60904703	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.266667
11	61412324	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.133333
11	61412428	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.272727
12	62330507	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.2
12	62330851	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.230769
1	62449654	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.8
1	62449702	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.263158
1	62449726	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	62449741	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.25
1	62449765	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.571429
17	62474548	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.166667
17	62476471	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.333333
17	62476483	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.166667
17	62476822	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.352941
17	62476837	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.428571
17	62476847	A->G	-	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.357143
12	62559540	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.357143
17	62590731	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.384615
17	62591128	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.181818
17	62591198	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.181818
17	62591206	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
11	62819831	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0952381
11	62823205	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.142857
11	62823210	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.133333
11	62823272	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.375
11	62823273	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.421053
11	62823356	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.111111
11	62823766	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0833333
11	62841013	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.2
11	62841022	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.133333
11	62886197	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.153846
11	62887582	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.263158
11	62887588	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.105263
11	62887647	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.285714
11	62887653	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.285714
11	62887816	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.142857
11	62887846	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.285714
8	63195941	A->G	+	ENSG00000185728	YTHDF3	protein_coding	Intergenic	.	.	Alu	0.25
10	63249712	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.3
15	63546807	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.153846
15	63546870	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.190476
15	63546882	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.2
15	63547458	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.133333
15	63547474	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.133333
15	63547491	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.133333
15	63547548	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.25
15	63548229	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.272727
15	63548230	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.636364
15	63548833	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.363636
15	63693412	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.2
15	63693432	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.428571
15	63693517	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.8
15	63693522	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.8
17	63840453	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.636364
17	64128031	A->G	-	ENSG00000178607	ERN1	protein_coding	Intergenic	.	.	Alu	0.2
14	64519753	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.342857
14	64519757	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.176471
11	64858412	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.153846
11	64858462	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.214286
1	64940930	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.111111
17	65016498	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0512821
17	65016599	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.097561
17	65016637	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0689655
11	65772932	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
11	65772933	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
11	65772989	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	65774442	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0227273
11	65774508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.164384
11	65774523	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0298507
11	65774549	A->G	-	.	.	.	Intergenic	.	.	Alu	0.046875
11	65774681	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0288462
11	65774682	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
11	65774688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0206186
11	65774690	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0208333
11	65897394	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.15
7	65981155	A->G	-	ENSG00000169919	GUSB	protein_coding	Intergenic	.	.	Alu	0.3
7	66158122	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.333333
12	66193998	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.105263
12	66194002	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.35
12	66194007	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.272727
12	66194056	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.105263
12	66202503	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.142857
12	66202516	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.333333
12	66202517	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.2
12	66202591	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.153846
11	66649517	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66658412	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.166667
7	66658413	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.181818
7	66658426	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.166667
7	66681531	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.285714
7	66685422	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.146667
7	66709758	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
7	66742881	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.08
7	66743148	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66743200	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.190476
7	66743454	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
1	66936297	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.25
1	66936746	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.181818
1	66936824	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.125
1	66936872	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.181818
1	66937535	A->G	+	ENSG00000198160	MIER1	protein_coding	Intergenic	.	.	Alu	0.125
7	67312468	A->G	+	ENSG00000106610	STAG3L4	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
17	67355267	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.3
1	67417613	A->G	-	ENSG00000142864	SERBP1	protein_coding	Intergenic	.	.	Alu	0.466667
10	67890513	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.137931
10	67890769	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.230769
10	67890845	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.125
10	67896687	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.384615
17	67898169	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.333333
17	67898276	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.210526
11	68093216	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.181818
17	68121553	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
17	68123912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	68123925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
17	68123955	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	68126113	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0384615
10	68760666	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.2
10	68975683	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.333333
10	68976093	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.384615
2	69928785	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0571429
2	69928790	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.0540541
X	71055308	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
X	71055315	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
X	71055360	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
X	71056186	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
X	71056254	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	71056279	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	71056303	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
X	71057767	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.0740741
X	71057789	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.466667
X	71057946	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.142857
X	71057955	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.111111
X	71058461	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.214286
X	71058506	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.214286
2	71336255	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.2
14	71440050	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.416667
12	71658426	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.157895
12	71658445	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	71658468	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0666667
12	71658507	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.1875
12	71658508	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.333333
12	71661620	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.133333
12	71661646	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.15
12	71661650	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	71661654	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.208333
12	71661685	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.277778
12	71661686	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.444444
12	71775803	A->G	+	ENSG00000080371	RAB21	protein_coding	Intergenic	.	.	Alu	0.142857
11	72061563	A->G	-	ENSG00000137497	NUMA1	protein_coding	Intergenic	.	.	Alu	0.3
11	72061564	A->G	-	ENSG00000137497	NUMA1	protein_coding	Intergenic	.	.	Alu	0.3
3	72416692	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.307692
3	72416701	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.181818
3	72416750	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.181818
15	72575000	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.142857
15	72575913	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.5
15	72575944	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.230769
15	72763250	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.384615
7	72981967	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
7	72981969	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
7	72981981	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
7	72982000	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
7	72995649	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.142857
7	72995721	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
7	72995872	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.727273
7	72995873	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	72996967	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
14	73137820	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.142857
14	73137921	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.117647
14	73152500	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.176471
7	73461839	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.9
7	73461963	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.142857
7	73462018	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.304348
7	73462034	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.588235
7	73462039	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.45
6	73513847	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
6	73513848	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
6	73513849	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	73513909	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
6	73513970	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	73513976	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
6	73514135	A->G	-	.	.	.	Intergenic	.	.	Alu	0.533333
6	73514451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
6	73514594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
6	73514596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.130435
6	73514607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
6	73514822	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
6	73514880	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0789474
10	73776315	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.108108
10	73776895	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.6
10	73776941	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.325581
10	73776962	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.288889
10	73777598	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.125
10	73777632	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.583333
10	73777649	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.107143
10	73777654	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.4
10	73777655	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.466667
10	73777694	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.214286
10	73777939	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.291667
10	73777960	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.173913
10	73777964	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0909091
10	73778138	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.692308
7	74178343	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.136364
7	74178413	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.25
7	74178423	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.25
X	74277823	A->G	-	ENSG00000230590	FTX	lincRNA	Intergenic	.	.	Alu	0.8
X	74580852	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
7	74880347	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
7	74880354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
7	74880419	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	75651610	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.153846
4	75916908	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.119048
4	75916917	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.225806
4	75916918	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.125
4	75916940	A->G	-	ENSG00000138744	NAAA	protein_coding	Intergenic	.	.	Alu	0.0444444
18	76809170	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.105263
4	77790777	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.266667
4	77790786	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.133333
X	77901971	A->G	+	ENSG00000131174	COX7B	protein_coding	Intergenic	.	.	Alu	0.25
15	78888232	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.111111
15	78888310	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	78888311	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0526316
15	78888315	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0487805
15	78888316	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.105263
15	78898227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.107143
15	78898243	A->G	+	.	.	.	Intergenic	.	.	Alu	0.685714
15	78898244	A->G	+	.	.	.	Intergenic	.	.	Alu	0.485714
15	78898313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
15	78898315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.354167
15	78898339	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0784314
15	78898343	A->G	+	.	.	.	Intergenic	.	.	Alu	0.06
15	78898352	A->G	+	.	.	.	Intergenic	.	.	Alu	0.186047
15	78898378	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
15	78898379	A->G	+	.	.	.	Intergenic	.	.	Alu	0.116279
15	78898419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
15	78898431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.170732
15	78898489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0930233
15	78899058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0235294
15	78899078	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0263158
15	78899236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0294118
15	78899260	A->G	+	.	.	.	Intergenic	.	.	Alu	0.060241
15	78899267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235955
15	78899273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0365854
15	78899285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
15	78899297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.123457
15	78899321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.056338
15	78899331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.213333
15	78899337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0491803
15	78899416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
15	78899417	A->G	+	.	.	.	Intergenic	.	.	Alu	0.318182
15	78899429	A->G	+	.	.	.	Intergenic	.	.	Alu	0.423077
15	78899431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.296296
15	78899435	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
15	78899500	A->G	+	.	.	.	Intergenic	.	.	Alu	0.122807
15	78899549	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0465116
17	82265078	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.133333
2	85043740	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.5
2	85609818	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.5
2	85609819	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.5
2	85610163	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.1875
2	85610216	A->G	-	ENSG00000168887	C2orf68	protein_coding	Intergenic	.	.	Alu	0.230769
6	85633760	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.181818
6	85633872	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.230769
6	85633895	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.142857
6	85633903	A->G	-	ENSG00000135316	SYNCRIP	protein_coding	Intergenic	.	.	Alu	0.307692
11	85955220	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	88855497	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	88866170	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.2
1	88884104	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.181818
15	89094633	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	89094967	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.294118
16	89405402	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.181818
1	89643293	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.263158
16	89887133	A->G	+	ENSG00000141002	TCF25	protein_coding	Intergenic	.	.	Alu	0.4
6	90283444	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.0666667
6	90283514	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.208333
6	90283520	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.125
6	90283540	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.105263
14	91287564	A->G	-	ENSG00000015133	CCDC88C	protein_coding	Intergenic	.	.	Alu	0.4
9	91292443	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.166667
9	91292452	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.166667
9	91292473	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.166667
9	91292551	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.166667
9	91294315	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.352941
7	92091528	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intergenic	.	.	Alu	0.285714
15	92889365	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.125
15	92890756	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0285714
15	92890794	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.0277778
15	92891338	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.027027
15	92893938	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.117647
15	92894069	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	92894748	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.307692
15	92908850	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.166667
1	93155118	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.272727
1	93155737	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.363636
2	96191065	A->G	-	ENSG00000084090	STARD7	protein_coding	Intergenic	.	.	Alu	0.333333
2	96279998	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.166667
2	96280376	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.2
2	96280386	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.181818
2	96280438	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.4
12	96327645	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.363636
12	96327710	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.214286
10	96580404	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.1875
9	96946263	A->G	-	ENSG00000196312	MFSD14C	protein_coding	Intergenic	.	.	Alu	0.4
10	97375921	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.142857
10	97375931	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.181818
10	97375956	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.333333
10	97376352	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.7
10	97376485	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.105263
10	97376486	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.117647
8	97729031	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
8	97729154	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0816327
8	97729162	A->G	+	.	.	.	Intergenic	.	.	Alu	0.150943
8	97729188	A->G	+	.	.	.	Intergenic	.	.	Alu	0.101695
8	97729189	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
8	97729201	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
8	97729686	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
8	97729727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
8	97729744	A->G	+	.	.	.	Intergenic	.	.	Alu	0.170213
8	97729752	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0408163
8	97729765	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
7	97971501	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
8	98043683	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.454545
8	98043686	A->G	-	ENSG00000156482	RPL30	protein_coding	Intergenic	.	.	Alu	0.688889
12	98596782	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.318182
12	98596785	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0487805
12	98596794	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.102564
12	98596830	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.113636
12	98596835	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0465116
12	98596859	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0526316
12	98596865	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0625
12	98596868	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.09375
12	98596871	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0625
12	98596874	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.533333
12	98596898	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.353846
12	98597476	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0547945
12	98597517	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.028169
12	98597518	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0410959
12	98597553	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0357143
12	98597563	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.046875
5	98918186	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
4	98923378	A->G	-	ENSG00000151247	EIF4E	protein_coding	Intergenic	.	.	Alu	0.2
13	99318224	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.214286
13	99318237	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.928571
13	99318245	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.461538
13	99318297	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	1
13	99318307	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.2
6	99405662	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.615385
6	99405689	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.461538
6	99405719	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.133333
7	99496615	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.06
7	99497307	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.333333
7	99497313	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.777778
7	99497339	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.263158
7	99497385	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.6875
7	99497452	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.2
3	100288017	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0689655
3	100288124	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.2
3	100288138	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.363636
3	100288146	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.25
3	100288160	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.25
7	100362642	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.272727
7	100362706	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.428571
7	100362711	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.444444
7	100362744	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.105263
7	100362756	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.111111
8	100713684	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0338983
8	100716315	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0921659
8	100716318	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0226244
2	101274883	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0350877
2	101274898	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0809249
2	101274924	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0960452
2	101274925	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0909091
2	101274947	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0441176
2	101275013	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0220264
2	101275059	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0411765
2	101275066	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.09375
2	101275076	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.025
2	101275090	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0434783
2	101275214	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0253165
2	101275229	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.049505
2	101275256	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.104839
2	101275389	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0625
2	101277421	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.333333
2	101288457	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0652174
3	101586678	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.545455
3	101586692	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.153846
10	101788221	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.190476
10	101788246	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.210526
10	101789386	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.1
10	101789412	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4375
10	101789415	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.148148
10	101789451	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.266667
10	101789714	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.117647
10	101789717	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.25
10	101789723	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.473684
10	101789782	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.571429
10	101789848	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0697674
10	101789855	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0465116
10	101789857	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.047619
10	101789867	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.097561
10	101789903	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.341463
10	101789917	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0377358
10	101789938	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.477273
10	101789940	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.195652
10	101789945	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4375
10	101790349	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.25
10	101790365	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.631579
10	101790369	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.647059
10	101790370	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.125
10	101790397	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.428571
10	101790437	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.222222
10	101790470	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.222222
10	101790472	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.117647
10	101790480	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.15
10	101790495	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.157895
10	101790544	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0869565
10	101790549	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.181818
10	101790550	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.190476
4	102558720	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.1
4	102559818	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.153846
4	102559883	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.133333
7	104945840	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.285714
7	105007910	A->G	-	ENSG00000228393	LINC01004	antisense	Intergenic	.	.	Alu	0.3
7	105023255	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105023282	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.545455
14	105057890	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.230769
11	108231624	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.4
11	108286225	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.3
11	108286228	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.272727
11	108286262	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.285714
11	108286263	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.5
12	108651939	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.333333
1	109063527	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.284314
1	109063534	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.298701
1	109063570	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0365854
1	109063609	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0843373
1	109063610	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0449438
1	109063614	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.02
1	109063618	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0776699
1	109063621	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.12
1	109063638	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.020202
1	109063714	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.104348
1	109063715	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.222222
1	109063723	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0917431
1	109408793	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.153846
1	109409295	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.181818
4	109573395	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.153846
12	110448078	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.157895
12	110448079	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.368421
12	110448139	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.238095
6	110896874	A->G	+	.	.	.	Intergenic	.	.	Alu	0.318182
6	110897111	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
6	110897119	A->G	+	.	.	.	Intergenic	.	.	Alu	0.619048
13	110897279	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0833333
13	110897383	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.25
6	110897484	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	110897569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
6	110897570	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
6	110897573	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
6	110897679	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
13	110898648	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.075
13	110898687	A->G	-	ENSG00000229152	ANKRD10-IT1	sense_intronic	Intergenic	.	.	Alu	0.0571429
13	110899955	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.117647
13	110899961	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0909091
13	110899967	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.166667
13	110899968	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.1
13	110899994	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.5
13	110899995	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.05
13	110900007	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.0731707
13	110900009	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.302326
13	110900040	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.548387
13	110900042	A->G	-	ENSG00000088448	ANKRD10	protein_coding	Intergenic	.	.	Alu	0.129032
1	110910553	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
10	110924832	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.181818
12	111427112	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	111427131	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.173913
12	111427184	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.125
7	112343799	A->G	+	ENSG00000226851	AC004112.1	antisense	Intergenic	.	.	Alu	0.0588235
2	112655243	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.325
1	112663601	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.2
1	112663631	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.7
1	112663970	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.3
1	112664023	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.375
1	112664048	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.142857
1	112664050	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.230769
9	113293518	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
2	113709956	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.4375
2	113709979	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.214286
2	113709980	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
1	113828908	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.3125
3	114061787	A->G	+	ENSG00000151576	QTRT2	protein_coding	Intergenic	.	.	Alu	0.333333
3	114061813	A->G	+	ENSG00000151576	QTRT2	protein_coding	Intergenic	.	.	Alu	0.105263
11	116922569	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.111111
11	116922583	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.117647
11	116923009	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.3
11	119001829	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.214286
X	119659915	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.0952381
X	119684556	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
X	119684628	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
8	119805997	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.857143
12	121424530	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.363636
12	121424531	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.363636
12	121424650	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.461538
12	122507295	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.105263
12	122507296	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.111111
12	122513946	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.09375
9	122817175	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.3
9	122817331	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.5
9	122817374	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.181818
12	122869759	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.0666667
12	122869858	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.137931
12	122869859	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.125
12	122869883	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.0512821
9	122901756	A->G	-	ENSG00000056586	RC3H2	protein_coding	Intergenic	.	.	Alu	0.363636
12	123421940	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.272727
12	123421941	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.2
12	123422176	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.125
12	123422655	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1875
12	123434296	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	123434302	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.352941
12	123434366	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.285714
12	123434382	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.307692
12	123434384	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.333333
8	124491046	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	0.1
8	124491047	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	0.15
9	125187440	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.125
9	125187448	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.285714
9	125187526	A->G	-	ENSG00000119414	PPP6C	protein_coding	Intergenic	.	.	Alu	0.153846
2	127334584	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.238095
2	127334643	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.25
2	127334652	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.294118
2	127334663	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.227273
2	127334735	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.105263
2	127334882	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.272727
2	127334909	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.15
2	127334967	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.230769
2	127349416	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.181818
2	127383711	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.136364
9	127790866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	127790891	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127790892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
9	127791000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.257143
9	127791015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
9	127791029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
9	127791033	A->G	+	.	.	.	Intergenic	.	.	Alu	0.109091
9	127791038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.145833
9	127791046	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0535714
9	127791048	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0350877
9	127791060	A->G	+	.	.	.	Intergenic	.	.	Alu	0.05
9	127791443	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
9	127791444	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
9	127791461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0789474
9	127791483	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
9	127791836	A->G	+	.	.	.	Intergenic	.	.	Alu	0.164384
9	127791842	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0735294
9	127791852	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
9	127791856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
9	127791859	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0508475
9	127791880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.140625
9	127791881	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	127791902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0327869
9	127792043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
9	127792057	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
9	127792076	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
9	127792116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127792392	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
9	127792393	A->G	+	.	.	.	Intergenic	.	.	Alu	0.145833
9	127792405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.134615
9	127793099	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
9	127793177	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
9	127793178	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
9	127793179	A->G	+	.	.	.	Intergenic	.	.	Alu	0.185185
9	127793191	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
9	127793918	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	127793964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
9	127794000	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
9	127794029	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	127795079	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0540541
9	127795222	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.125
9	127795356	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.0540541
9	127795481	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.08
9	127795615	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.153846
9	127805324	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.411765
9	127805351	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.08
9	127805365	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.583333
9	127806385	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.210526
9	127806438	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.1
4	128010484	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.117647
10	128053124	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0714286
7	128659370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
7	128661292	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
9	129948232	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.3
9	129954831	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.214286
9	129954925	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.1
9	129955263	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.192308
8	130001747	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.2
8	130002349	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.416667
8	130002379	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.6
8	130004364	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.0909091
8	130004905	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.230769
9	130705010	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
9	130705038	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705092	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
9	130705134	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705173	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	130705306	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
9	130705317	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
9	130705341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	130705834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
9	130705846	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130705998	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
9	130706801	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
9	130706880	A->G	+	.	.	.	Intergenic	.	.	Alu	0.421053
2	131091873	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.115385
5	131159990	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.190476
2	131504240	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.166667
5	131766165	A->G	-	ENSG00000273217	AC008695.1	protein_coding	Intergenic	.	.	Alu	0.2
10	131902865	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.125
10	131902886	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.105263
10	131903382	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.181818
10	131914315	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	Intergenic	.	.	Alu	0.105263
5	132918507	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.5
5	132922064	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
8	133279090	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.125
10	133294676	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.15
10	133294688	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.176471
10	133294699	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.25
10	133294700	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.583333
10	133294732	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.333333
8	133495119	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.0909091
8	133562348	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.8
5	134379590	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.4
5	134379591	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.3
5	134381507	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0714286
5	134382718	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0869565
9	134905549	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
9	134905551	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
9	134905569	A->G	-	.	.	.	Intergenic	.	.	Alu	0.186441
9	134905580	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
9	134905604	A->G	-	.	.	.	Intergenic	.	.	Alu	0.135593
9	134905624	A->G	-	.	.	.	Intergenic	.	.	Alu	0.155556
9	134905679	A->G	-	.	.	.	Intergenic	.	.	Alu	0.177778
9	134905680	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0612245
9	134905713	A->G	-	.	.	.	Intergenic	.	.	Alu	0.184211
9	134905757	A->G	-	.	.	.	Intergenic	.	.	Alu	0.138889
2	135747160	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.153846
6	136786272	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.272727
6	136786300	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.1875
6	136786304	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.1
6	136786320	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.117647
5	138364138	A->G	+	ENSG00000120733	KDM3B	protein_coding	Intergenic	.	.	Alu	0.153846
5	138524441	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.214286
5	138524444	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.285714
5	138573296	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.166667
4	139021254	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.142857
4	139046043	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0597015
4	139047243	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139047244	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.203704
4	139047249	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
4	139047299	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0769231
4	139047312	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.111111
4	139047313	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.423077
4	139047323	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139047352	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.307692
4	139047378	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.538462
4	139047379	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.384615
4	139047388	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.230769
7	139056522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.272727
7	139071189	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.111111
7	139071234	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.181818
7	139076673	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.111111
7	139080522	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0933333
7	139080554	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0392157
5	139284349	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.133333
5	139284352	A->G	+	ENSG00000120725	SIL1	protein_coding	Intergenic	.	.	Alu	0.133333
5	139349382	A->G	+	ENSG00000120727	PAIP2	protein_coding	Intergenic	.	.	Alu	0.3
7	139368658	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.294118
7	139368659	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.333333
7	139368663	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.166667
7	139370557	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0487805
7	139418854	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.0425532
5	140469451	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	140469452	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.153846
8	141172831	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.153846
8	141172860	A->G	+	ENSG00000105339	DENND3	protein_coding	Intergenic	.	.	Alu	0.166667
2	143272435	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.230769
2	143272443	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.294118
2	143272444	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.375
2	143272533	A->G	+	ENSG00000075884	ARHGAP15	protein_coding	Intergenic	.	.	Alu	0.5
8	144292777	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.137931
8	144292847	A->G	+	ENSG00000185122	HSF1	protein_coding	Intergenic	.	.	Alu	0.166667
1	145775091	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.272727
1	145775092	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.3
1	145775147	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.181818
1	145776233	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.3
1	145793936	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.125
5	149499511	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.454545
1	150309096	A->G	+	.	.	.	Intergenic	.	.	Alu	0.583333
1	150309097	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
1	150309136	A->G	+	.	.	.	Intergenic	.	.	Alu	0.818182
1	150340771	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.266667
1	150340950	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.2
1	150565716	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.25
1	150565726	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.105263
1	150569904	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0701754
1	150570299	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0266667
1	150570331	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0363636
1	150570362	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0441176
1	150570388	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0294118
1	150570443	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.16
1	150570810	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.031746
1	150570877	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0833333
1	150570878	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.133333
1	150571314	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0847458
1	150571325	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.220339
1	150571337	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0735294
1	150572351	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0769231
3	150585287	A->G	+	ENSG00000120742	SERP1	protein_coding	Intergenic	.	.	Alu	0.133333
3	150585385	A->G	+	ENSG00000120742	SERP1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	150612591	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.125
1	150612617	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.1875
1	150612623	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.141414
1	150612650	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.391304
1	150612683	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0740741
1	150612688	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.24
1	150613023	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0540541
1	150613029	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.125
1	150613030	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.3125
1	150613114	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.111111
1	150613132	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0740741
1	150613133	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.210526
1	150613174	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0512821
1	150613178	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0555556
5	150713498	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.153846
4	151107274	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.3
5	151271819	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
5	151271828	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
5	151271929	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
5	151271933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
5	151271988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
1	151447736	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.2
1	151447740	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.3
1	151452955	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.166667
1	151871090	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
7	152158644	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.125
3	152329506	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.136364
3	152329528	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.190476
3	152329542	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.214286
1	155558933	A->G	-	ENSG00000116539	ASH1L	protein_coding	Intergenic	.	.	Alu	0.3
1	155671174	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.2
1	155681529	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
4	155937707	A->G	-	ENSG00000256043	CTSO	protein_coding	Intergenic	.	.	Alu	0.3
1	156469386	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0545455
1	156469395	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.345455
1	156469396	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.125
1	156469457	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.23913
1	156471271	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0714286
1	156472998	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.166667
7	157232452	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.2
7	157232459	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.125
7	157232626	A->G	+	ENSG00000009335	UBE3C	protein_coding	Intergenic	.	.	Alu	0.15
7	157372998	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.153846
7	157373926	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.23913
7	157373953	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.162162
7	158789449	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0666667
7	158789454	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0606061
7	158789478	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.16129
7	158789485	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.121212
7	158789511	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	158789544	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
7	158789575	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.148148
7	158789613	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	158789614	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
7	158799603	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158800669	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
2	159732784	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
2	159733498	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.0909091
6	159734242	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.333333
6	159734266	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0666667
6	159734291	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.0740741
6	159734602	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.178571
6	159734640	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.2
5	171409898	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.315789
5	171409907	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.125
2	173931548	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	173931621	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.25
2	173932329	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.2
2	173932365	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0869565
2	173932472	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0740741
2	173932482	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.15625
2	173946978	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0769231
2	178434213	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.2
2	178434492	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.230769
2	178434518	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.105263
2	178434558	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.111111
2	178434564	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.105263
2	178435262	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.272727
2	178435289	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.307692
2	178435304	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.181818
2	178435308	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.5
2	178438758	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.25
2	178438759	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.416667
5	181240894	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	181240957	A->G	-	ENSG00000204628	RACK1	protein_coding	Intergenic	.	.	Alu	0.1875
3	182830236	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.166667
3	182830248	A->G	+	ENSG00000058063	ATP11B	protein_coding	Intergenic	.	.	Alu	0.153846
3	183637663	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.111111
3	183640824	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.111111
3	183640862	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.363636
4	184781677	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0645161
4	184781747	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.153846
2	190885452	A->G	+	ENSG00000115419	GLS	protein_coding	Intergenic	.	.	Alu	0.181818
2	191075911	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	191075943	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.461538
2	191075948	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.333333
2	191075953	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.181818
2	191075990	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.1
2	191076014	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.208333
3	193629553	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.363636
3	194650191	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.666667
3	194650192	A->G	-	ENSG00000041802	LSG1	protein_coding	Intergenic	.	.	Alu	0.666667
3	195527220	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.142857
3	195527232	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195527328	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.117647
3	195527338	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.285714
3	196052366	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0952381
3	196052713	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.307692
3	196052714	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.307692
3	196052895	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.4
2	196161717	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0740741
2	196162715	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0454545
2	196162782	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0714286
2	196162833	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.05
3	196904678	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.181818
3	196906073	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.583333
3	196906099	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.214286
3	196906109	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.25
3	196907353	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.363636
3	196911632	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.230769
3	196911641	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.133333
3	196911690	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.166667
3	196911731	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.181818
3	196911797	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.12
2	197490657	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.108108
2	197491909	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0851064
2	197492070	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	197492071	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.285714
2	197492074	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.325
2	200855397	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.037037
2	200855752	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	200856342	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.307692
2	200856343	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.12
2	200856394	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	201142066	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.285714
1	202149128	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.0540541
2	202288684	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.3
2	202294884	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.25
1	202948852	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.416667
2	203298303	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	203298780	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203298797	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	203298824	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.105263
2	203298848	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	203298863	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203300768	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.176471
2	203300769	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.529412
2	203300810	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203300831	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203300839	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.5625
2	203303233	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203303279	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203303321	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.5
2	203303330	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.285714
2	203303440	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203303441	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.190476
2	203303462	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203303467	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203303486	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.285714
2	203303510	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.416667
2	203303755	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.3125
2	203303756	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.529412
2	203303761	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.277778
2	203303796	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203303798	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0952381
2	203303822	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203303827	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203303852	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.157895
2	203303956	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.428571
2	203303958	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203303964	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.266667
2	203303965	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.375
2	203304019	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203304099	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.9
2	203304241	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203304259	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.727273
2	203304262	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	203304275	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.545455
2	203304298	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.176471
2	203304337	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203304458	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203304459	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.333333
2	203304861	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203304891	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.157895
2	203305318	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.5
2	203305340	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203305367	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203305376	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203305382	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203305391	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203305447	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
1	203312659	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
1	203312660	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	203776257	A->G	+	.	.	.	Intergenic	.	.	Alu	0.470588
1	204535803	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.142857
2	216209018	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
2	218247832	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218370925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
2	224791605	A->G	-	ENSG00000135905	DOCK10	protein_coding	Intergenic	.	.	Alu	0.181818
2	227539684	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.272727
2	227539691	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.363636
2	227539910	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.461538
2	227539915	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.615385
2	227539953	A->G	+	ENSG00000173744	AGFG1	protein_coding	Intergenic	.	.	Alu	0.2
2	229831545	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.133333
2	229831548	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.133333
2	229831569	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.166667
2	229831587	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.181818
2	233071214	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.230769
2	233158848	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.153846
2	233158949	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.133333
2	233159489	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.705882
2	233159540	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.137931
2	233159542	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0740741
2	233159544	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0769231
2	233159547	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.0740741
2	233159573	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.115385
2	233159635	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.285714
2	233159639	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.142857
2	233159643	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.785714
2	233159651	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.142857
2	233205823	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.125
2	233205824	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.125
1	235826738	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.416667
1	235826820	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.609756
1	235826852	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0754717
1	235826871	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.04
1	235826876	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0576923
1	235826896	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.12963
1	235826899	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.142857
1	235826915	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.254902
1	235826956	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.307692
1	235826964	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.075
1	235827113	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0588235
1	235827159	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.307692
1	235827161	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.666667
1	235827195	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.25
1	235827198	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.2
1	235827245	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.75
1	235827247	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.681818
1	235827269	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.56
1	235827286	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.16
1	236599990	A->G	-	ENSG00000119285	HEATR1	protein_coding	Intergenic	.	.	Alu	0.181818
2	237707351	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.4
2	241331161	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.384615
12	3611137	A->G	-	ENSG00000280202	AC005831.1	TEC	Intron	.	.	Alu	0.217391
19	11449896	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.16
19	11449901	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.7
19	11449945	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.318182
19	11449948	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.636364
19	11449949	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.434783
19	11449962	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.210526
19	11449984	A->G	+	ENSG00000130175	PRKCSH	protein_coding	Intron	.	.	Alu	0.153846
19	12003412	A->G	+	ENSG00000219665	ZNF433-AS1	processed_transcript	Intron	.	.	Alu	0.230769
3	14944573	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0412371
3	14944591	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0967742
3	14944597	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.584158
3	14944603	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.41
3	14944604	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.141414
3	14944630	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.468254
3	14944631	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.125984
3	14944643	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0661157
3	14944892	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.287234
3	14944910	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0714286
3	14944940	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0869565
3	14944945	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.179104
3	14944946	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.188406
3	14944964	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0810811
9	15505203	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intron	.	.	Alu	0.2
19	16079970	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0449438
19	16565897	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intron	.	.	Alu	0.736842
19	16566061	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intron	.	.	Alu	0.1
19	16640046	A->G	-	ENSG00000267904	AC024075.1	sense_intronic	Intron	.	.	Alu	0.25
14	20449869	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.222222
14	20449906	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.266667
14	20450149	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.307692
14	20450182	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.125
14	20451378	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.26087
1	20649499	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.5
1	20649508	A->G	-	ENSG00000158828	PINK1	protein_coding	Intron	.	.	Alu	0.4
16	22328911	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.296296
16	22419381	A->G	-	ENSG00000257122	RRN3P3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0740741
15	24983529	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.263158
15	24983537	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.421053
15	24983610	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.4375
15	24983613	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.1875
15	24983641	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.133333
15	24983646	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.714286
15	24983667	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.4
15	24983668	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.6
6	25998902	A->G	+	ENSG00000272462	U91328.1	lincRNA	Intron	.	.	Alu	0.181818
6	25998911	A->G	+	ENSG00000272462	U91328.1	lincRNA	Intron	.	.	Alu	0.230769
1	28509422	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.0386266
1	28509425	A->G	+	ENSG00000180198	RCC1	protein_coding	Intron	.	.	Alu	0.042654
10	28523667	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0491803
10	28523674	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0333333
10	28523689	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intron	.	.	Alu	0.0634921
17	28721197	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.0434783
17	28721232	A->G	+	ENSG00000198242	RPL23A	protein_coding	Intron	.	.	Alu	0.0487805
1	29172551	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.193548
1	29173276	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.3
1	29173302	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intron	.	.	Alu	0.3
13	30357307	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.2
13	30357333	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.3
13	30367618	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.2
13	30367687	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.4
13	30367695	A->G	-	ENSG00000238121	LINC00426	lincRNA	Intron	.	.	Alu	0.5
16	31123695	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.3
16	31123721	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.357143
16	31123746	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.15
16	31123759	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.15
16	31123773	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.521739
16	31123774	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.375
16	31123786	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.208333
13	32525035	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.392857
13	32525038	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.16
20	35713269	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.478261
20	35713270	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.235294
20	35713402	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.0526316
19	38844801	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.0606061
19	38844809	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.2
19	38844891	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.0645161
19	38845285	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.0540541
19	38845288	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.459459
19	38845289	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.166667
19	38845319	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.382353
19	38845324	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.09375
19	39491564	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.3
19	39491565	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.2
19	39491588	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.5
19	39491591	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.538462
19	39491616	A->G	+	ENSG00000105197	TIMM50	protein_coding	Intron	.	.	Alu	0.307692
15	41298632	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.025974
15	41298634	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0253165
15	41298640	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0232558
15	41298641	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0224719
15	41298647	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0224719
15	41298662	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0266667
15	41298663	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0266667
15	41298676	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0379747
15	41298706	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0227273
15	41298725	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.025641
15	41298734	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.060241
15	41298774	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.179104
15	41298775	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.42029
15	41298780	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.322581
15	41298784	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.206897
15	41298797	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0350877
15	41298801	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0701754
15	41298807	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.142857
15	41298815	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0634921
15	41298823	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.516667
15	41298855	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.031746
15	41299144	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.913043
15	41299194	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0350877
15	41299199	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.118644
15	41299219	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.514706
15	41299220	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.470588
15	41299237	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.145161
15	41299245	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0666667
15	41299249	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0612245
15	41299253	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.616667
15	41299259	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.25
15	41300994	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.148148
15	41301110	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0545455
15	41301154	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0535714
15	41302323	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0810811
15	41302347	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.075
15	41302363	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0487805
15	41302454	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0588235
15	41305286	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.102564
15	41305287	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.179487
15	41305325	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0645161
15	41305335	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0540541
15	41305345	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0555556
15	41305361	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.162162
15	41305376	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.128205
15	41305379	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.371429
15	41305405	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0652174
15	41305449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.396552
15	41305458	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.160714
15	41305459	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.142857
15	41305471	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.114754
15	41305473	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0677966
21	41429719	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.0526316
21	41429727	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.142857
21	41429787	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.272727
21	41429890	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.545455
17	42014703	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intron	.	.	Alu	0.285714
10	42516257	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.285714
6	42941579	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.214286
6	42941602	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.315789
19	43661459	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intron	.	.	Alu	0.105263
1	44777306	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.155556
1	44777345	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.0384615
17	45218399	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.133333
17	45219866	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.12
17	45219915	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.0909091
17	45219937	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.105263
17	45220002	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.107143
17	45220007	A->G	-	ENSG00000267121	AC008105.3	antisense	Intron	.	.	Alu	0.107143
19	48256386	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0793651
19	48257738	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.235294
3	50112927	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.1
3	50112956	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0909091
2	53870581	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.105263
2	53870635	A->G	-	ENSG00000068878	PSME4	protein_coding	Intron	.	.	Alu	0.125
19	54311235	A->G	-	ENSG00000187116	LILRA5	protein_coding	Intron	.	.	Alu	0.115385
19	57304785	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.384615
19	57304790	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.125
19	57304836	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.2
19	57304837	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.3
19	57307008	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.25
19	57307395	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.142857
18	57641639	A->G	+	ENSG00000267040	AC027097.1	antisense	Intron	.	.	Alu	0.0540541
14	58258333	A->G	+	ENSG00000100567	PSMA3	protein_coding	Intron	.	.	Alu	0.2
14	58293911	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.157895
14	58295680	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0483871
14	58295740	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.123457
14	58295747	A->G	-	ENSG00000139971	ARMH4	protein_coding	Intron	.	.	Alu	0.0833333
19	58582393	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.1875
19	58582609	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.208333
19	58582630	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.133333
19	58582631	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.2
19	58582632	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.133333
19	58584082	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.272727
19	58584089	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.2
19	58584115	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.416667
19	58584165	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.157895
19	58584199	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.235294
19	58584206	A->G	+	ENSG00000213753	CENPBD1P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.266667
17	64782783	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.142857
17	64782811	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.307692
1	65427824	A->G	+	ENSG00000213625	LEPROT	protein_coding	Intron	.	.	Alu	0.105263
11	65439993	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.037037
11	65440001	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0789474
11	65440055	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.153846
11	65441347	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.43299
11	65441384	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.511111
11	65441385	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0681818
11	65441403	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.037037
11	65441418	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.168831
11	65441426	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.148148
11	65441427	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.25
11	65441448	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0549451
11	65442678	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.392157
10	73778960	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.166667
10	73779402	A->G	+	ENSG00000196968	FUT11	protein_coding	Intron	.	.	Alu	0.0666667
X	73947010	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.133333
X	73947053	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.04
X	73947054	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0416667
X	73947058	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0444444
X	73947071	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0571429
15	74026271	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.166667
15	74026768	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.181818
15	74026790	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.3
15	74027510	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.125
17	78109579	A->G	-	ENSG00000204282	TNRC6C-AS1	processed_transcript	Intron	.	.	Alu	0.111111
5	78359506	A->G	-	ENSG00000245556	SCAMP1-AS1	lincRNA	Intron	.	.	Alu	0.133333
17	81855966	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.15
16	88719138	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.15
15	90075462	A->G	-	ENSG00000140548	ZNF710	protein_coding	Intron	.	.	Alu	0.3
11	93734814	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.1
11	93734942	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0444444
11	93734963	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0350877
11	93735426	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.105263
11	93735478	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0666667
11	93735505	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.125
11	93735523	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0833333
14	94053259	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.105263
14	94053289	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.105263
14	94053348	A->G	-	ENSG00000089737	DDX24	protein_coding	Intron	.	.	Alu	0.133333
8	98043194	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0425532
8	98043209	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.341463
8	98043224	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0869565
8	98043264	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.166667
8	98043265	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.333333
8	98043657	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.111111
8	98043991	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.310345
8	98044053	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.0566038
8	98044058	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.170213
8	98044059	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.139535
8	98044071	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.216216
8	98044109	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.105263
8	98044110	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.540541
12	98597604	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.173077
12	98597658	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.173913
12	98597662	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.109375
12	98597676	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.450704
2	101281570	A->G	-	ENSG00000163162	RNF149	protein_coding	Intron	.	.	Alu	0.125
2	101281700	A->G	-	ENSG00000163162	RNF149	protein_coding	Intron	.	.	Alu	0.047619
2	101281797	A->G	-	ENSG00000163162	RNF149	protein_coding	Intron	.	.	Alu	0.047619
X	101393069	A->G	+	ENSG00000241343	RPL36A	protein_coding	Intron	.	.	Alu	0.2
10	101787842	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0333333
10	101787851	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0666667
10	101787864	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0909091
10	101787865	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.134615
10	101787871	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.27451
10	101787878	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0833333
14	102038074	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.1875
4	102810582	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.1
14	103682520	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.272727
14	103682604	A->G	+	ENSG00000126214	KLC1	protein_coding	Intron	.	.	Alu	0.266667
10	112449496	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.4
10	112449589	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.375
10	112449593	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.222222
10	112449594	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.105263
10	112449595	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.263158
10	112449632	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.538462
10	112449956	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.2
10	112449964	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.176471
10	112449969	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.0952381
10	112450010	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.266667
10	112450101	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.2
10	112450131	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.105263
10	112450154	A->G	+	ENSG00000151532	VTI1A	protein_coding	Intron	.	.	Alu	0.105263
13	114287444	A->G	+	ENSG00000169062	UPF3A	protein_coding	Intron	.	.	Alu	0.0689655
13	114287468	A->G	+	ENSG00000169062	UPF3A	protein_coding	Intron	.	.	Alu	0.0833333
11	117212821	A->G	-	ENSG00000160613	PCSK7	protein_coding	Intron	.	.	Alu	0.3
12	122875156	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.105263
12	122878848	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.357143
12	122878929	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.148148
12	122883751	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.153846
12	122883774	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.153846
12	122886500	A->G	-	ENSG00000280138	AC027290.2	TEC	Intron	.	.	Alu	0.166667
7	128529363	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.125
7	128529378	A->G	-	ENSG00000273270	AC090114.2	lincRNA	Intron	.	.	Alu	0.2
9	129504142	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.214286
9	129504148	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0833333
9	129504313	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.181818
9	129506080	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0769231
9	129506161	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0588235
9	129506703	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.171429
9	129506718	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0930233
9	129506758	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.129032
9	129506770	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0821918
9	129506786	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0677966
5	140535829	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intron	.	.	Alu	0.181818
8	144974294	A->G	-	ENSG00000196922	ZNF252P	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.133333
3	150585399	A->G	+	ENSG00000120742	SERP1	protein_coding	Intron	.	.	Alu	0.1
4	151103660	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.025974
4	151103663	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0365854
7	155004339	A->G	+	ENSG00000273344	PAXIP1-AS1	lincRNA	Intron	.	.	Alu	0.166667
4	158679888	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.3
4	158680006	A->G	+	ENSG00000171503	ETFDH	protein_coding	Intron	.	.	Alu	0.272727
1	174015944	A->G	-	ENSG00000236535	RC3H1-IT1	sense_intronic	Intron	.	.	Alu	0.15
2	178433762	A->G	+	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.176471
2	191076105	A->G	-	ENSG00000138378	STAT4	protein_coding	Intron	.	.	Alu	0.0769231
2	191076120	A->G	-	ENSG00000138378	STAT4	protein_coding	Intron	.	.	Alu	0.44
2	191076126	A->G	-	ENSG00000138378	STAT4	protein_coding	Intron	.	.	Alu	0.12
2	191076133	A->G	-	ENSG00000138378	STAT4	protein_coding	Intron	.	.	Alu	0.541667
2	218256306	A->G	+	ENSG00000261338	AC021016.2	sense_overlapping	Intron	.	.	Alu	0.166667
1	225786970	A->G	+	ENSG00000143742	SRP9	protein_coding	Intron	.	.	Alu	0.09375
2	230167167	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.0740741
2	230167170	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.192308
2	230167175	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.16
2	230167188	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.0714286
2	230167200	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.130435
2	230167236	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.25
2	230167242	A->G	-	ENSG00000225963	AC009950.1	antisense	Intron	.	.	Alu	0.363636
X	299510	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	299548	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.32
X	299568	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	299571	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	299572	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.178571
X	299580	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	299593	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.115385
X	299611	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.269231
X	299626	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.192308
X	299636	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.1
X	299646	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.258065
X	299669	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
X	299678	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	299870	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	299877	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	300135	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.113208
X	300140	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0677966
X	300804	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.047619
X	300808	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	300833	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.172414
X	300843	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	300912	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	300964	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
X	300965	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
X	301050	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	301074	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.15625
X	301090	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.21875
X	301185	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	301231	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0757576
X	301258	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
X	301263	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0789474
X	301279	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.08
X	301364	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	301412	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.103448
X	301507	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.05
X	301548	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
X	301573	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
X	301719	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	301726	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	301730	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	301755	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	301791	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.222222
X	301806	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	301887	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	301888	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.241379
X	301900	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0377358
X	302703	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	440933	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0747664
17	440945	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0217391
17	441982	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.0616438
17	441992	A->G	-	ENSG00000183688	RFLNB	protein_coding	three_prime_utr	.	.	Alu	0.06
17	517657	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.2
17	517658	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	517794	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	769388	A->G	-	ENSG00000177225	GATD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	1032791	A->G	+	ENSG00000064666	CNN2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	1572916	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0365854
17	1572929	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	1572938	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.1
17	1572943	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.107692
17	1573731	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.102564
1	1663538	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.309524
1	1663560	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	1663567	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.391304
1	1663568	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0638298
1	1663582	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	1663586	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.12766
1	1663592	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	1663608	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0634921
1	1663609	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.258065
1	1663635	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.16129
1	1663638	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0483871
1	1663698	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.145833
1	1663741	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.192308
1	1664099	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	1664101	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.25
1	1664121	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	1664147	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.785714
17	2417334	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	2417351	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.190476
17	2417357	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.384615
17	2418312	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.171429
17	2418393	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	2418394	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.263158
17	2418411	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	2434886	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	2434906	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.2
7	2435034	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.266667
7	2435095	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.1875
7	2435096	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.125
18	2702225	A->G	+	ENSG00000101596	SMCHD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	2839954	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	2839964	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.217391
4	2839971	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.283019
4	2840072	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.107143
4	2840074	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	2840078	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	2840104	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.210526
4	2840110	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.636364
4	2840114	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.47619
4	2840118	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.736842
4	2840166	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	2840220	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
X	2906198	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.615385
X	2906205	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	2906210	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.428571
X	2906213	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.846154
X	2906270	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.5625
X	2906276	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.875
X	2906302	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	2906313	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	2906344	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.3
X	2906847	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	2906865	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.318182
X	2906875	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.904762
X	2906892	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	2906927	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	2906938	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	2906942	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	2906944	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
X	2906947	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.928571
X	2907017	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	2907034	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.818182
X	2907035	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.454545
X	2907078	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
X	2907083	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	1
4	2938358	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.741935
4	2938364	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.0588235
4	2938371	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.310345
4	2938398	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	2938408	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.344828
4	2938420	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.354839
4	2938437	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.5
4	2938538	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.6
4	2938620	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	2938637	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	2938638	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.285714
4	2938644	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	1
4	2938670	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.9
4	2938674	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.1
4	2938686	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	2938703	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	2938707	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.24
4	2938711	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.148148
4	2938735	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.833333
4	2938750	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.129032
4	2938758	A->G	-	ENSG00000087269	NOP14	protein_coding	three_prime_utr	.	.	Alu	0.3125
6	3020559	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	3544896	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	3545012	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.459459
2	3545017	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	3545047	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	3545048	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	3545056	A->G	-	ENSG00000171865	RNASEH1	protein_coding	three_prime_utr	.	.	Alu	0.15625
17	3808760	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	0.4
17	3808792	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	0.2
1	3813836	A->G	-	ENSG00000116198	CEP104	protein_coding	three_prime_utr	.	.	Alu	1
20	3867451	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	3867455	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.272727
20	3867567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.3
20	3867578	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3869544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.428571
20	3869553	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3869554	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	3869566	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.384615
20	3869840	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	3869848	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.307692
20	3869866	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.307692
20	3869867	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.384615
20	3870544	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.388889
20	3870545	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	3870562	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.904762
20	3870567	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.15
20	3870574	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3870961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.157895
20	3870974	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.529412
20	3870980	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3870981	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3870998	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.5
20	3871010	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.136364
20	3871020	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.521739
20	3871115	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.347826
20	3871116	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.217391
20	3871143	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.277778
20	3871144	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.45
20	3871157	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3872182	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.315789
20	3872206	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3872207	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.173913
20	3872211	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.391304
20	3872214	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	3872278	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.1
20	3872327	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.15
20	3872331	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	3872353	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.346154
20	3872358	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	3872363	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0645161
20	3872377	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	3872413	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3872420	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.206897
20	3873269	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3873373	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3873414	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3875359	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	3928884	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.6
20	3928888	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	3928954	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3928960	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	3928986	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.117647
20	3929016	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.157895
20	3929065	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3929066	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.352941
20	3929073	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.285714
20	3929074	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	3929282	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.1875
20	3929292	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3929317	A->G	-	ENSG00000125779	PANK2	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	4653127	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	4653128	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	4653211	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	4653226	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	4653414	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	4653590	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	4653661	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.631579
19	4653713	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	4654368	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	4654369	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	4654407	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	4654444	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	4654525	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	4654539	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.315789
19	4654542	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.45
19	4654585	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	4654589	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.238095
19	5909554	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	5909560	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.125
19	5909573	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.16
19	5909609	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	5909619	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.269231
19	5909710	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	5909711	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	5909712	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	5909772	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.35
19	5909773	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.3
1	6223184	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.25
19	6379671	A->G	-	ENSG00000125651	GTF2F1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	6522089	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	6522287	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	6522293	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	6522498	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0677966
1	6523323	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.05
1	6523335	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	6525271	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	6643364	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.15
8	6643365	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	6643430	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.473684
8	6643431	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	6643485	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.25
11	8686293	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.192308
11	8686296	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0714286
11	8686360	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.176471
11	8686361	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.285714
11	8686370	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.2
11	8686405	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0434783
11	8686414	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	8687278	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	8687279	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	8687342	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.636364
11	8687344	A->G	+	ENSG00000166441	RPL27A	protein_coding	three_prime_utr	.	.	Alu	0.636364
16	9104214	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	9106176	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0229885
16	9106489	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	9106490	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.202532
16	9106547	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0321101
16	9106548	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.100917
16	9110782	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0235294
16	9110861	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.03
16	9110891	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0325203
16	9111026	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0322581
1	9265729	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	9266898	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	9266901	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.1
1	9266938	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	9267003	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.148148
1	9267009	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	9267029	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	9267049	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0882353
1	9267054	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.102564
1	9267072	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0967742
1	9267081	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.162162
1	9267082	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.189189
1	9267987	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	9268033	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	9268043	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	9268044	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.388889
1	9268061	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.4
1	9268141	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0952381
1	9268154	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	9268164	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.178571
1	9268184	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	9268196	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.15
1	9271016	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	9271035	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	9271042	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.15625
1	9271071	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	9271114	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	9271117	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	9271125	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0606061
1	9271134	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	9271143	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	9271195	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.12
19	9561636	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.125
19	9561684	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	9561756	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0246914
19	9561760	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.113924
19	9562232	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.101695
19	9562237	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0350877
19	9562243	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.148148
19	9562267	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.183673
19	9562303	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.125
19	9562305	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.2
19	9562313	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	9562431	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	9562436	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	9562437	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	9562455	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0652174
19	9563675	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.175676
19	9564378	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.275
19	9650693	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	9650706	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0540541
19	9650786	A->G	-	ENSG00000171466	ZNF562	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	9836048	A->G	+	ENSG00000214021	TTLL3	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	10150912	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0945946
3	10150924	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.528571
3	10150933	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.190476
3	10150958	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	10150968	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0853659
3	10150973	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0235294
3	10150974	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0361446
3	10151010	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.113636
3	10151020	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0612245
3	10151033	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	10151060	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	10151069	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	10151132	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	10151141	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	10151154	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	10151791	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	10151810	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0961538
3	10151831	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.031746
3	10151836	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0307692
3	10151882	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0357143
3	10151919	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0350877
3	10151922	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0566038
3	10151940	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0775862
3	10151941	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.112
3	10152048	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.15625
3	10152189	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.3
1	10457219	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	10457941	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	10457963	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	10457976	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10457995	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10458631	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10458918	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10458919	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.125
1	10459830	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	10459831	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460448	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.2
1	10460645	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10460668	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	10460694	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	10460710	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	10461143	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.7
1	10461180	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	10461181	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	10461203	A->G	-	ENSG00000160049	DFFA	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	10926794	A->G	+	ENSG00000179583	CIITA	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	10930130	A->G	+	ENSG00000142444	TIMM29	protein_coding	three_prime_utr	.	.	Alu	0.14
19	11449574	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	11449612	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.529412
19	11449617	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	11449646	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.14
19	11449668	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.2
19	11449669	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0888889
19	11449682	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.1
19	11449715	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.172414
19	11449718	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	11449720	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	11449732	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0377358
19	11449769	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0545455
19	11449778	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.134615
19	11449796	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	11449797	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.212766
19	11449809	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0925926
19	11449811	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0363636
19	11450478	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	11834868	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.277778
16	11834919	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.115385
16	11834956	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	11834963	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	11834989	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.473684
16	11834999	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	11835002	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	11835030	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	11835067	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	11835094	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.882353
16	11835249	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.470588
16	11835296	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	11835314	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	11835319	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.55
16	11835320	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	11835346	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.225806
16	11835350	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	11835590	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	11835626	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	11837106	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.15
16	11837138	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	11842699	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0789474
8	11842704	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.209302
8	11842709	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.116279
8	11842722	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.451613
8	11842726	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	11842734	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	11842742	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.138889
8	11842752	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.257143
8	11842775	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.1
8	11842796	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.235294
8	11842809	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	11842815	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.235294
8	11843016	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11843017	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11843086	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.146341
8	11843113	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	11843122	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	11843128	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.129032
8	11843167	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.366667
8	11843168	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.103448
8	11843173	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0740741
8	11843176	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.416667
8	11843198	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11843219	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.125
8	11843220	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.2
8	11843774	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.9
8	11843848	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	11843869	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	11843875	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	11843883	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.210526
8	11843896	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	11843908	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	11843910	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.26087
8	11843920	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.608696
8	11843945	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	11843949	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.315789
8	11843964	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	11843970	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.1
8	11843971	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	11843981	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.8125
8	11843995	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.1
8	11844000	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.304348
8	11844027	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.147059
19	12080887	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	12080920	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	12121034	A->G	+	ENSG00000181192	DHTKD1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12631605	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.0361446
19	12631612	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.0470588
16	12663198	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.147541
16	12663342	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.148148
19	13773078	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.909091
19	13773083	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	13773138	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	13773154	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.357143
19	13773170	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	13773174	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	13773192	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.466667
19	13773206	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	13773209	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	13773477	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	13773594	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.8
19	13773604	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.909091
19	13773605	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.727273
19	13773608	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	13773855	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	13773873	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	13773911	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	13773913	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.26087
19	13773925	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.434783
19	13773934	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.08
6	13788021	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	13789155	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	14498927	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	14499678	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	14499807	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	14734257	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.487805
19	14734269	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	14734293	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.15625
19	14734297	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	14734311	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.40625
19	14734324	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	14734645	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.108108
19	14734646	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	14734660	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
19	14734664	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	14734669	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	14734699	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	14734700	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.173913
19	14734702	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.4
19	14734718	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	15072148	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.243243
3	15072149	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.179487
3	15072335	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.171429
3	15072340	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.485714
3	15072386	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.394737
3	15072979	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.195652
3	15072985	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	15665142	A->G	+	ENSG00000197312	DDI2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
16	15700166	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.192308
16	15700252	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.107143
16	15700334	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.151515
19	16155700	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	16155701	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	16155714	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	16155721	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	16155738	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	16550675	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	16550680	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	16551866	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
19	16552431	A->G	-	ENSG00000127526	SLC35E1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
X	16763026	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	16763032	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
X	16763033	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	16763492	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	16763514	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	16764764	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.148148
X	16764788	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	16764896	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	16764930	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.108696
22	17110243	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.215686
22	17110269	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.14433
22	17110351	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.12381
22	17110367	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.040404
22	17110377	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.238532
22	17110383	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0485437
22	17110400	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0285714
22	17110591	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.171429
22	17110600	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.15942
22	17110647	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.102564
22	17110696	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.028169
22	17110706	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0229885
22	17110752	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0408163
22	17110778	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	17110793	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0258621
22	17113329	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.107143
22	17113332	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.666667
22	17113449	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.355556
22	17113458	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.108696
22	17113459	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.382979
17	17186598	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.375
17	17186612	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.388889
17	17186661	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.233333
17	17189282	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	17189293	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.115385
7	17344729	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.230216
7	17344730	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.716312
7	17344734	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.128571
7	17344747	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.034188
7	17344769	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.213592
7	17344771	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.211009
7	17344795	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.126866
7	17344810	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0588235
7	17344813	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.588785
7	17344816	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.6
7	17344890	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.616667
7	17344891	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	17344903	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.571429
7	17345061	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.287879
7	17345062	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.515152
7	17345106	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.350649
7	17345131	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0306122
7	17345139	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0425532
7	17345150	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.158879
7	17345154	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0526316
7	17345155	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0964912
7	17345194	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.261194
7	17345204	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0704225
7	17345208	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.214286
7	17345236	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.048951
7	17345256	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.156716
7	17345258	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.19403
7	17345263	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.299145
19	17552159	A->G	+	ENSG00000167483	FAM129C	protein_coding	three_prime_utr	.	.	Alu	0.5
19	17552178	A->G	+	ENSG00000167483	FAM129C	protein_coding	three_prime_utr	.	.	Alu	0.642857
19	17552179	A->G	+	ENSG00000167483	FAM129C	protein_coding	three_prime_utr	.	.	Alu	0.5
19	17552456	A->G	+	ENSG00000167483	FAM129C	protein_coding	three_prime_utr	.	.	Alu	0.2
4	17626143	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	17627355	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17627731	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17627817	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	17801156	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	17801160	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	17801196	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17801201	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	17801204	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.173913
4	17801225	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	17801266	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.25
4	17801307	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	17801356	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.233333
4	17801386	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.152174
4	17801396	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.568627
4	17801936	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.45
4	17801939	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	17801981	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	17801991	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	17801993	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.12
4	17802039	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.451613
4	17802050	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17802058	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.310345
4	17803087	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0545455
4	17803097	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0545455
4	17803114	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0512821
4	17803117	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0731707
4	17803162	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0588235
4	17803224	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.1
4	17803229	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0967742
4	17803249	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	17825712	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.116883
19	17825734	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0294118
19	17826379	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18070833	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	18070869	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	18088523	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	18088572	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	18088602	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	18088603	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	18088655	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	18088665	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.148148
22	18088688	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	18088708	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.09375
22	18088711	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	18089806	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	18089831	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.5
22	18089884	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.208333
22	18089887	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	18089909	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.45
22	18089963	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	18089964	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	18089976	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	18272871	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	18274034	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	18274061	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	18274075	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	18274116	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	18274140	A->G	-	ENSG00000177302	TOP3A	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	18364358	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	18364359	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	18364412	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	18364413	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18364467	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18364535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18365396	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	18365417	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	18365422	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	18365429	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.388889
19	18365442	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	18365443	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18365460	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18365472	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	18365482	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.555556
19	18365484	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.294118
19	18365515	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	18365532	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	18365552	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.125
19	18365605	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	18365606	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.26087
19	18365618	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.26087
19	18366502	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	18366519	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.875
19	18366527	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.727273
19	18366535	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	18366600	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.55
19	18366610	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.608696
19	18366651	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	18366732	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	18366886	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18366892	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	18366898	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.6
19	18366899	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.592593
19	18366943	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.185185
19	18366951	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	18366971	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	18366990	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	18366993	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	18367005	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18367041	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	18367049	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.5
19	18367091	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.428571
19	18367105	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18368012	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	18368048	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	18368075	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.294118
19	18368319	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18368328	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	18487695	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.857143
20	18487707	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.692308
20	18487708	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	18487717	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.2
20	18487824	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.125
20	18487829	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.111111
20	18487867	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.307692
20	18487868	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.0952381
20	18488443	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.363636
20	18488498	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	18488533	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.4
1	19216185	A->G	-	ENSG00000127463	EMC1	protein_coding	three_prime_utr	.	.	Alu	0.3
1	19258999	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0857143
1	19259013	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	19259025	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.225
1	19259059	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.135135
1	19259961	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	19259964	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.545455
1	19260038	A->G	+	ENSG00000053372	MRTO4	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	19502526	A->G	-	ENSG00000006007	GDE1	protein_coding	three_prime_utr	.	.	Alu	0.025974
13	19672201	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.128205
13	19672219	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.285714
13	19672245	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.115385
13	19672262	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.183673
13	19672378	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.178571
13	19672406	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0862069
13	19672838	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0961538
13	19672866	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0344828
13	19672883	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.392157
13	19672884	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.25
13	19672889	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.118644
13	19672935	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.307692
13	19672976	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.340909
13	19673001	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	19680684	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	19680702	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.102564
19	19680995	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	19681590	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.191176
19	19681594	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.191781
19	19681599	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0263158
19	19681629	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.030303
19	19681639	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.091954
19	19681647	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	19681702	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.060241
19	19681710	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0246914
19	19682924	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.25
19	19682947	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	19682971	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.289474
19	19682986	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	19683047	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	19683066	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	19683067	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.568182
19	19786283	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.153846
19	19792233	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.655172
19	19792260	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.380952
19	19792298	A->G	-	ENSG00000267419	AC011477.1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.884615
19	20198688	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	20199583	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	20199610	A->G	+	ENSG00000256229	ZNF486	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	20284282	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	20286764	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.275
10	20286781	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	20286805	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.180328
10	20286825	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0483871
10	20286842	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.25
10	20286851	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.117647
10	20286854	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
10	20286904	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.192982
19	20544033	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	20544092	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.173913
1	20651958	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	20651964	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.116564
1	20651990	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	20652030	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.026455
1	20652071	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0326797
1	20652097	A->G	-	ENSG00000244038	DDOST	protein_coding	three_prime_utr	.	.	Alu	0.0362319
22	20891037	A->G	+	ENSG00000099940	SNAP29	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21184141	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.113208
19	21184185	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	21184188	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0508475
19	21184189	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.05
19	21184194	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0491803
19	21184229	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.125
19	21184265	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21184285	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	21184291	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.243243
19	21184295	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.05
19	21184299	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	21184300	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.238095
19	21185530	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.314286
19	21185538	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.470588
19	21185560	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.193548
19	21185564	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	21185590	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.1
19	21185635	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	21185644	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	21185663	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.533333
19	21190058	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	21190063	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21291602	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.172414
19	21291622	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.107143
19	21291680	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.705882
19	21291699	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21291702	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21292055	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	21292099	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.6
19	21292286	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.125
19	21292303	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.190476
13	21374317	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.311475
13	21374321	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.191781
13	21374336	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0555556
13	21374353	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.232323
13	21374356	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.267327
13	21374357	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0490196
13	21374363	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.814815
13	21374430	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0280374
13	21374431	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.203704
13	21374436	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0363636
13	21374437	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.321739
13	21374462	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0441176
13	21374485	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.291667
13	21374486	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.378378
13	21374507	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.244186
13	21374508	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.364706
13	21374516	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.269231
13	21374875	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0526316
13	21374877	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.351351
13	21374889	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.352941
13	21374890	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0555556
13	21374899	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.181818
13	21374908	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.366667
13	21374916	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.289474
13	21374942	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0307692
13	21374954	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.166667
13	21374966	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0361446
13	21374968	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.435294
13	21374969	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0235294
13	21374971	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.040404
13	21375010	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0245902
13	21375012	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.279279
13	21375022	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.486486
13	21375026	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.242991
13	21375052	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.123711
13	21375058	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.307692
13	21375072	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.235294
14	21460463	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.833333
14	21460473	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.818182
14	21460687	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	21460692	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.6
14	21460742	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	21460751	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.818182
14	21460752	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.727273
14	21460801	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.2
14	21460885	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.769231
14	21460886	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
18	21631272	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	21639981	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.818182
16	21640210	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	21640211	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.666667
16	21640219	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.857143
19	21805298	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	21805364	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	21805381	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	21805428	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.25
19	21806237	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21806242	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.125
19	21806265	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	21806266	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	21806358	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.16
19	21806437	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	21806438	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	21806440	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	22253756	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	22253769	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	22253776	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	22253833	A->G	+	ENSG00000168495	POLR3D	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	22285539	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.7
16	22285915	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	22285946	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	22285956	A->G	+	ENSG00000103319	EEF2K	protein_coding	three_prime_utr	.	.	Alu	0.117647
18	23296527	A->G	-	ENSG00000134490	TMEM241	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	23465185	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	23465257	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.15
16	23465260	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.568966
16	23465266	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0851064
16	23465274	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	23465858	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.302326
X	23702537	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	23921849	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	23921898	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	24000272	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.097561
2	24000288	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0612245
2	24000289	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.12
2	24000297	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	24000319	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0425532
2	24000371	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
2	24000381	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0731707
2	24000395	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0540541
2	24000421	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	24000471	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	24000483	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	24000512	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	24001241	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	24001264	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	24001267	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24002136	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	24002180	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	24002525	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	24002539	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.3
2	24002565	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24002575	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	24002584	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	24002590	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	24002639	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24002671	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	24002672	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.4
2	24002678	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.75
2	24002684	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
X	24077168	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0304054
X	24077169	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0456026
X	24077208	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.152381
X	24077266	A->G	+	ENSG00000130741	EIF2S3	protein_coding	three_prime_utr	.	.	Alu	0.0319635
22	24572508	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0425532
22	24572543	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
22	24572551	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	24572605	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.09375
22	24572611	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0645161
22	24572640	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0625
22	24572646	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.121212
22	24572667	A->G	+	ENSG00000100028	SNRPD3	protein_coding	three_prime_utr	.	.	Alu	0.0731707
7	25120962	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	25121288	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	25121294	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	25725098	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.375
22	25725110	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.736842
22	25725689	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	25725691	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	25725692	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.454545
6	25986272	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.103448
6	25986307	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.147059
6	25986395	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	25986434	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0789474
6	25986489	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	25988712	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0625
22	26522823	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.151515
22	26522975	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.2
22	26522978	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	26522998	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	26523760	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	26523850	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.35
22	26524431	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	26524445	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.09375
22	26524450	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.1
22	26524455	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	26524469	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.4
22	26524476	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.4
22	26525283	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.222222
22	26525285	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.567568
22	26525338	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	26876298	A->G	-	ENSG00000142751	GPN2	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	27030260	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.0483871
1	28335320	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.2
1	28335805	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	28335812	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28498805	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	28498819	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	28498825	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28498858	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.421053
1	28498884	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28498906	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	28498907	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	28498921	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	28499503	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28499519	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.318182
1	28499573	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	28499629	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28499678	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	28499749	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	28715343	A->G	+	ENSG00000162419	GMEB1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	28715344	A->G	+	ENSG00000162419	GMEB1	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	28965643	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	29665079	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0813953
16	29665112	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.106599
16	29665124	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0545455
16	29665148	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0206186
16	29665154	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0656566
16	29665185	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0463918
16	29665239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0422535
16	29665253	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0223881
16	29665256	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0536913
16	29665290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	29665299	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0659341
16	29665308	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0801887
16	29665318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0315315
16	29665330	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0505837
16	29666252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0214286
16	29666269	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0268456
16	29667514	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0757576
16	29667522	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.253333
16	29667523	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.628205
16	29667528	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	29667531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29667544	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.145455
16	29667545	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29667553	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.115385
16	29667566	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.218182
16	29667577	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0754717
16	29667595	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.196721
16	29667598	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	29667600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0925926
16	29667614	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.178571
16	29667615	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	29667616	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0980392
16	29667617	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	29667618	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	29667620	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0784314
16	29667629	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0980392
16	29667655	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	29667656	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.188406
16	29667665	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	29667669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.19403
16	29667683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0246914
16	29667717	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0721649
16	29667731	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.08
16	29667759	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.152778
16	29667760	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.08
16	29667791	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0813953
16	29668210	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0224719
16	29668212	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.292135
16	29668220	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29668229	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.17
16	29668238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.228916
16	29668252	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.205479
16	29668255	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.430556
16	29668275	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0441176
16	29668276	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	29668277	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.031746
16	29668289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0277778
16	29668290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.225352
16	29668292	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0447761
16	29668298	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29668307	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.315789
16	29668316	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.119048
16	29668317	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.238095
16	29668318	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	29668329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0408163
16	29668335	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.108696
16	29668481	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	29668486	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0307692
16	29668493	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	29668501	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.16129
16	29668510	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.428571
16	29668526	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.258065
16	29668529	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0701754
16	29668531	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	29668539	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29668565	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.5
16	29668568	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29668578	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.28
16	29668580	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.458333
16	29668600	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.106383
16	29668637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.444444
16	29668657	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29668669	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.290323
16	29668670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	29668682	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29668683	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.128205
16	29668695	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0731707
16	29668699	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	29668700	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.230769
16	29668710	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.319149
16	29668711	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	29668722	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.031746
16	29668724	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	29668884	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12987
16	29668892	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.208955
16	29668893	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.217391
16	29668901	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0882353
16	29668909	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29668913	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.03125
16	29668918	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0491803
16	29668946	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.613636
16	29668947	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.488372
16	29668952	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29668962	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.216216
16	29668964	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	29668966	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	29668996	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.277778
16	29669001	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.236842
16	29669005	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0930233
16	29669027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.444444
16	29669037	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	29669042	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.12069
16	29669045	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.322034
16	29669054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	29669069	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.192308
16	29669073	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	29669082	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0240964
16	29669087	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0227273
16	29669096	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	29669097	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29669099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0224719
16	29669101	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.247191
16	29669105	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0238095
16	29669241	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29669245	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.125
16	29669258	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	29669279	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	29669281	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	29669306	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.384615
16	29669341	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.75
16	29669375	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	29669398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	29669401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29669410	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.461538
16	29669411	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.769231
16	29669440	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.138889
16	29669462	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29669463	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.488372
16	29669475	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.846154
16	29669603	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	29669624	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.75
16	29669625	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.833333
16	29669630	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29669670	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.7
16	29669690	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.3
16	29669859	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.2
16	29669867	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	29669948	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0886076
16	29669959	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0675676
16	29669967	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.118421
16	29669977	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0365854
16	29669982	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.378049
16	29670010	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.120879
16	29670018	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.049505
16	29670027	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0306122
16	29670046	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.039604
16	29670047	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0515464
16	29670050	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.265957
16	29670054	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.029703
16	29670060	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.030303
16	29670090	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0238095
16	29670098	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0258621
16	29670099	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0420168
16	29670108	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0737705
16	29670123	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0699301
16	29670137	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.208333
16	29670139	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.273504
16	29670150	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0336134
16	29670153	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0940171
16	29670177	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.171171
16	29670186	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0241935
16	29670201	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.072
16	29670216	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.032
16	29670232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.132867
16	29670238	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.135338
16	29670239	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.233083
16	29670244	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0222222
16	29670289	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.129771
16	29670290	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0387597
16	29670303	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0423729
16	29670313	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0392157
16	29670324	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.047619
16	29670328	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0854701
16	29670329	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.075
16	29670333	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0373832
16	29670338	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.02
16	29670339	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0315789
16	29670342	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0520833
16	29670346	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0666667
16	29670368	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.277108
16	29670369	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.25
16	29670378	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.121622
16	29670395	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0649351
16	29670398	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0243902
16	29670401	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.037037
16	29670417	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0285714
16	29670421	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0972222
16	29670430	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.1
16	29670434	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0470588
16	29670439	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	29670459	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0875
16	29670471	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0921053
16	29670476	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.025
16	29670477	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0875
19	29701052	A->G	-	ENSG00000131943	C19orf12	protein_coding	three_prime_utr	.	.	Alu	0.230769
13	30457256	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.266667
13	30457483	A->G	-	ENSG00000189403	HMGB1	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	30678390	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.454545
8	30678436	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.206897
8	30678458	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.101266
8	30678463	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	30678498	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.298246
8	30678499	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.350877
8	30678561	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.259259
8	30678608	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0493827
8	30678626	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0485437
8	30678629	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0784314
8	30678634	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.381443
8	30678635	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.135417
8	30678893	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0735294
8	30678933	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0680272
8	30678967	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0245902
8	30679027	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.3125
8	30679037	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.175676
8	30679049	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	30679062	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.103448
8	30679066	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	30679086	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.565789
8	30679089	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.233766
17	30783451	A->G	-	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.0212766
X	30836586	A->G	-	ENSG00000157625	TAB3	protein_coding	three_prime_utr	.	.	Alu	0.545455
14	31094338	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	31094344	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	31095558	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.3
11	31431089	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.636364
11	31431120	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	31431131	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.25
11	31431137	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	31431147	A->G	+	ENSG00000170946	DNAJC24	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	31447721	A->G	-	ENSG00000203546	AL139353.1	protein_coding	three_prime_utr	.	.	Alu	0.416667
18	32068932	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0232558
18	32068940	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.123077
18	32068941	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0692308
18	32068946	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.04
18	32068949	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0483871
18	32068964	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0298507
18	32068967	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0535714
18	32068976	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.02
18	32068979	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.270833
18	32068984	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.297521
18	32069036	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0322581
18	32069039	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.056962
18	32069040	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0253165
18	32069041	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0377358
18	32069054	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0915493
18	32069080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0636364
18	32069081	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0353982
18	32069109	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0353982
18	32069110	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0555556
18	32069116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0642202
18	32069133	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0707965
18	32069140	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.141593
18	32069158	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0485437
18	32070141	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0591398
18	32070144	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0552486
18	32070206	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0883978
18	32070207	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0216216
18	32070300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0262172
18	32070362	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0206186
18	32070418	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.03125
18	32070423	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0469484
18	32070432	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0215517
18	32070433	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0387931
18	32070445	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0307692
18	32070766	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.10219
18	32070769	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0277778
18	32070784	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0254777
18	32070785	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.02
18	32070805	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0496894
18	32070808	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.113924
18	32070809	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0645161
18	32070834	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.041958
18	32070870	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0238095
18	32070871	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0551181
18	32070887	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0298507
18	32070965	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.102941
18	32070966	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0948905
18	32070978	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0723684
18	32070980	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0596026
18	32071161	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0634921
18	32071235	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0510949
18	32071300	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0553191
18	32071377	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0412698
18	32071399	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0425532
18	32071923	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0893855
18	32071927	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.101604
18	32071929	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0216216
18	32071930	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.037037
18	32071935	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0233645
18	32071974	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0359477
18	32072080	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0544554
18	32072093	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0410256
18	32072094	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0947368
18	32072103	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0219298
18	32072116	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0481928
18	32072156	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.104072
2	32307672	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.4
2	32307880	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	32308638	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.3
2	32308658	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32310697	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32310767	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	32310831	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32310833	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	32604186	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	32604223	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.230769
11	32604263	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.428571
11	32604379	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	32682561	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	32682585	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	32682595	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	32682650	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	32682660	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32682681	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	32682683	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.1
1	32682686	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	32683020	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.125
1	32683022	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.52
1	32683034	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	32683090	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	32683095	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	32683105	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32683135	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	32683139	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.357143
1	32683159	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32683188	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.545455
1	32683655	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	32683737	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	32683833	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	32683842	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.5
1	32683885	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	32683894	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	32683895	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	32683901	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.583333
1	32683907	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	33005238	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.160714
6	33005247	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	33005250	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.196078
6	33005300	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.128205
6	33005354	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0810811
6	33005380	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.911765
6	33005392	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.1
6	33005409	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.26087
6	33005429	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.125
6	33005440	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.684211
6	33005453	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.1
6	33005477	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	33005742	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.625
6	33005769	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0952381
6	33005780	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.55
6	33005797	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.304348
6	33005798	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.208333
6	33005807	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.190476
6	33005853	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.2
6	33005854	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.444444
6	33005862	A->G	-	ENSG00000204252	HLA-DOA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
21	33263948	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.518519
21	33263955	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
21	33263959	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.129032
21	33263988	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.259259
21	33263998	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	33264042	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.16129
21	33264056	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.617647
21	33264080	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.44
21	33264774	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.222222
21	33264779	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.1
21	33264783	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.277778
21	33264835	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.315789
21	33264840	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.222222
21	33264841	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.1875
21	33264844	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.571429
21	33264854	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.533333
21	33264916	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.727273
21	33264920	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.727273
21	33264941	A->G	+	ENSG00000159110	IFNAR2	protein_coding	three_prime_utr	.	.	Alu	0.375
6	33300472	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.122807
6	33300776	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.102273
6	33300844	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0381679
6	33301511	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0830325
6	33301530	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0225989
21	33355763	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.135135
21	33358771	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	34231279	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.5
15	34231280	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.4
15	34231318	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.4
15	34231612	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.105263
15	34231650	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.612903
15	34231661	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.148148
15	34231666	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.413793
15	34231722	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.208333
15	34231728	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.681818
15	34231746	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	34231754	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.235294
15	34231765	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.157895
15	34231862	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.454545
15	34231863	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.545455
15	34231871	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	34232288	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.103448
15	34232304	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	34232507	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	34470191	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.375
19	34470204	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	34470209	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	34470616	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.5
19	34470640	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.2
19	34470662	A->G	+	ENSG00000126261	UBA2	protein_coding	three_prime_utr	.	.	Alu	0.6
17	35010569	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.025974
17	35010640	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0425532
17	35010676	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0379747
14	35276045	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	35276082	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.2
14	35276094	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.3
14	35276098	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	35602076	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.241379
1	35602113	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
1	35602148	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	35602151	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.344828
1	35602159	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.4
1	35602165	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	35602183	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.227273
1	35602324	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.571429
1	35602630	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.25
1	35602674	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	35602675	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.269231
1	35602677	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	35602694	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.4
1	35602724	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	35602733	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	35602763	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0327869
1	35602768	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.457627
1	35602769	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.677966
22	35659829	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.155844
22	35659830	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.402597
22	35659905	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.342466
22	35659907	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.084507
22	35659927	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.24
22	35659950	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.134228
22	35659964	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.433121
22	35659976	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.269565
22	35661142	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.161905
22	35661159	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.389381
22	35661178	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.258824
22	35661192	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0659341
22	35661201	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.207317
22	35661204	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.240506
22	35661210	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0289855
22	35661214	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.121622
22	35661237	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.404762
22	35661238	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.108696
22	35661247	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	35661278	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.162162
22	35661291	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.394737
22	35661307	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.111111
22	35661308	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.311111
18	36174955	A->G	+	ENSG00000134759	ELP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	36215301	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.363636
9	36215312	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.2
9	36216765	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.129032
9	36216800	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.255814
9	36216804	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0681818
9	36216837	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.047619
9	36216840	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0465116
9	36216841	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.05
9	36216842	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.1
9	36216843	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.075
9	36216846	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.0555556
9	36216898	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.2
9	36216901	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.238095
9	36216953	A->G	-	ENSG00000122705	CLTA	protein_coding	three_prime_utr	.	.	Alu	0.2
22	36266855	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.416667
22	36266887	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.235294
22	36266900	A->G	+	ENSG00000100342	APOL1	protein_coding	three_prime_utr	.	.	Alu	0.1875
21	36293862	A->G	+	ENSG00000142197	DOPEY2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	37028686	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	37102068	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	37102070	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0275862
2	37102071	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.434483
2	37102074	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.124224
2	37102092	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.128834
2	37102095	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.3875
2	37102118	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.117073
2	37102128	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0236967
2	37102140	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.174312
2	37102164	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.240196
2	37102170	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0288462
2	37102188	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.116505
2	37102204	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.301075
2	37102209	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.128342
2	37102226	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0314136
2	37103225	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.193548
2	37103243	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	37103258	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	37103288	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.68
2	37103292	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
2	37103293	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.434783
2	37103333	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.259259
2	37103334	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37103360	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.72
2	37103363	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	37103364	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.1
2	37103423	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.209302
2	37103468	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.22
2	37103469	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.24
2	37103471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.735849
2	37103477	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.113208
2	37103873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0632184
2	37103876	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.201149
2	37103880	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0760234
2	37103882	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.263804
2	37103885	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0202703
2	37103894	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.12
2	37103895	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.350993
2	37103922	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.208955
2	37103934	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.186567
2	37103946	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0863309
2	37103956	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0366972
2	37103973	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.306931
2	37103976	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.39
2	37104018	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.12766
2	37104028	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.707317
2	37104057	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37104064	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.659091
2	37104078	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.35
2	37104367	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0927835
2	37104382	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.469388
2	37104388	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0652174
2	37104403	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0307692
2	37104404	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
2	37104412	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	37104417	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0612245
2	37104471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.149425
2	37104484	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.15534
2	37104496	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0530303
2	37104497	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0875912
2	37104499	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.110294
2	37104502	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.253425
2	37104519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0479452
2	37104521	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0275862
2	37104523	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.035461
2	37104538	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0333333
2	37104568	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.033557
2	37104593	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0607477
2	37104602	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.161137
2	37104603	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0238095
2	37104607	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.234146
2	37202383	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.5
2	37202389	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37202390	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	37202546	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37202590	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	37202594	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37202595	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.125
2	37204342	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.178571
2	37204377	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37204378	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.148148
2	37204395	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	37204443	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	37204461	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	37204538	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.2
2	37204550	A->G	+	ENSG00000218739	CEBPZOS	protein_coding	three_prime_utr	.	.	Alu	0.0882353
5	37290221	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.551724
5	37290233	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.433333
5	37290234	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.2
5	37290298	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.368421
5	37290311	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	37290314	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	37290333	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	37290365	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.9
5	37290390	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.8
5	37290391	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.8
5	37291271	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	37291284	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.541667
5	37291307	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.125
5	37291309	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	37291310	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	37291344	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.727273
5	37291374	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.2
5	37291379	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.2
5	37291446	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.545455
5	37291471	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.6
5	37291494	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.2
5	37291516	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.3
17	37477716	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.416667
17	37477729	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	37477732	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.75
17	37477738	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	37477866	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.3
17	37477867	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.2
17	37477872	A->G	+	ENSG00000276234	TADA2A	protein_coding	three_prime_utr	.	.	Alu	0.3
9	37503316	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0566038
9	37503349	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.148148
9	37503367	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0508475
9	37503370	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0877193
9	37503395	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0625
9	37503457	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.08
9	37503458	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0816327
9	37503467	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0888889
9	37503493	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.175
9	37503541	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.152542
9	37503558	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0655738
17	37515493	A->G	-	ENSG00000275066	SYNRG	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	37612349	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	37614041	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	37860922	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.375
1	37860957	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.173913
1	37860971	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.173913
1	37861008	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	37861032	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	37861033	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.08
1	37861056	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.5
1	37861066	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.290323
1	37861101	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.129032
1	37861102	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.206897
1	37861124	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	37861463	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	37861481	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	37861509	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.09375
1	37861644	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	37861785	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	37861791	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	37861815	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	37861819	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	37861844	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	37861873	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	37861906	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	37861912	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.25
7	38724620	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.08
7	38724758	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.2
7	38724795	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	38724859	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.333333
7	38724864	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	38849582	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.192308
17	38849586	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.52
17	38849587	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.25
17	38849615	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0967742
17	38849890	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	38849917	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	38849961	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.269231
17	38849970	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.15
17	38849996	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.217391
19	38868084	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.551724
19	38868085	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	38868163	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	38868164	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.347826
19	38868182	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.16
19	38868217	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	38868226	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	38868388	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	38868411	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.6
19	38868412	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.3
19	38868415	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.571429
19	38868416	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	38868428	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	38868430	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.4
19	38868460	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.15
19	38868465	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	38868466	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	38868510	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	38868512	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.185185
19	38868522	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.08
19	38868589	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.138889
19	38869067	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.521739
19	38869073	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	38970679	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0216216
8	38970718	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0454545
8	38970719	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.121212
8	38970726	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0310078
8	38970748	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.185185
8	38971692	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.138211
8	38971701	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0576923
8	38971816	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0994764
8	38971826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.177419
8	38971832	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0255102
8	38971897	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.221477
8	38971934	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.102941
8	38972218	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.212121
8	38972235	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.285714
8	38972256	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.170588
8	38972313	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0341463
8	38972316	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0324074
8	38972320	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.343478
8	38972326	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0677966
8	38972328	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	38972406	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0250896
8	38972446	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.103448
8	38972447	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.292079
8	38972958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0322581
8	38972961	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0408163
8	38972977	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.080292
8	38972981	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0222222
8	38973012	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.033557
8	38973017	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0718563
8	38973037	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0406977
8	38973038	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0614525
8	38973066	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	38973067	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.137681
8	38973070	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	three_prime_utr	.	.	Alu	0.104839
22	39018748	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	39018749	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.155556
22	39018767	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.485714
22	39018907	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.574468
22	39018918	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.106383
22	39019867	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.5
22	39019886	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.173913
22	39019900	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.545455
22	39019905	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.217391
22	39019906	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.782609
22	39019976	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0882353
22	39020018	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0540541
22	39020030	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.377778
22	39020048	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0666667
22	39020058	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0454545
22	39020070	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.12963
22	39020072	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0566038
22	39020076	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.604167
22	39032722	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.636364
22	39032849	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.578947
22	39033060	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	39033096	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.294118
22	39033161	A->G	+	ENSG00000284554	AL022318.4	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	39256155	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	39256199	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39256258	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	39257045	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	39427577	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	39427590	A->G	+	ENSG00000090924	PLEKHG2	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	39490484	A->G	+	ENSG00000105197	TIMM50	protein_coding	three_prime_utr	.	.	Alu	0.4
4	39549051	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.7
4	39549083	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	39549095	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.190476
4	39549156	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.647059
4	39549167	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.470588
4	39549347	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	1
4	39549388	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.875
4	39549398	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.5
4	39549404	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.470588
4	39549487	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.2
4	39549520	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.461538
4	39549559	A->G	-	ENSG00000163683	SMIM14	protein_coding	three_prime_utr	.	.	Alu	0.8
3	40466452	A->G	+	ENSG00000188846	RPL14	protein_coding	three_prime_utr	.	.	Alu	0.4
5	40830385	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	40830389	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.15
5	40830625	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.2
5	40830675	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.3
5	40830676	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.2
5	40831251	A->G	-	ENSG00000145592	RPL37	protein_coding	three_prime_utr	.	.	Alu	0.125
8	41542432	A->G	+	ENSG00000147536	GINS4	protein_coding	three_prime_utr	.	.	Alu	0.2
19	41871472	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.48
19	41871481	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	41871486	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.4
19	41871516	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.666667
19	41871518	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.2
19	41872620	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	41872626	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.2
19	41872634	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.315789
19	41872642	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.625
19	41872643	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.529412
19	41872774	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.4
19	41872775	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.733333
19	41872788	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.125
19	41872804	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	41872815	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.157895
19	41872816	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.6
19	41872851	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.590909
19	41872861	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	42078850	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	42079616	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.352941
6	42079624	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42079637	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	42079688	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.25
6	42079814	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	42079815	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.4
6	42080610	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.25
6	42080651	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	42207346	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0408163
15	42532148	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.025641
15	42532171	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0246914
15	42532297	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.0336134
15	42532350	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.04
15	42567144	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0888889
15	42567145	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0888889
15	42567184	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
15	42567307	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
15	42567308	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0967742
15	42567547	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
15	42567724	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
15	42567882	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.047619
15	42569386	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	42569407	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.125
15	42569424	A->G	+	ENSG00000137814	HAUS2	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	42886842	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0576923
6	42886873	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	42886895	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0363636
6	42886926	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
6	42886943	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
6	42886944	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.030303
6	42887319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.025641
6	42887368	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.04
6	42888216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.307692
6	42888224	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.538462
6	42888229	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0444444
6	42888234	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.244898
6	42888241	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.238095
6	42888255	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
6	42888269	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.04
6	42888291	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.595238
6	42888313	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.357143
6	42888317	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	42888326	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
6	42888362	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.321429
6	42888367	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	42888372	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.785714
6	42888378	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.580645
6	42888418	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.108108
6	42888419	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
6	42888432	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.097561
6	42888438	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.435897
6	42889167	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
6	42889179	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.557692
6	42889185	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	42889186	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0701754
6	42889199	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.114754
6	42889216	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
6	42889221	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	42889240	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.131148
6	42889245	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.382353
6	42889251	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.03125
6	42889285	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42889290	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42889293	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.377358
6	42889299	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0434783
6	42889319	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	42889320	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.113636
6	42889329	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	42889373	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.234375
6	42889382	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.046875
6	42889391	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.03125
6	42889398	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	42889406	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0322581
6	42889445	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
21	42909823	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	43020436	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	43020450	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43020458	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.5
8	43020459	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3125
8	43020505	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43020529	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43020553	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43020639	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	43020646	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.277778
8	43020671	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.192308
8	43020837	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.315789
8	43020843	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.444444
8	43020845	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.35
8	43020846	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43020872	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.222222
8	43020915	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.210526
8	43020925	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.444444
8	43020939	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.136364
8	43020952	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43020955	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.411765
8	43020963	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
8	43020981	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.363636
8	43021004	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43021008	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.227273
8	43021014	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.190476
8	43021022	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.125
8	43021023	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.266667
8	43021030	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	43021034	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.388889
8	43021343	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	43021365	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.217391
8	43021378	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.08
8	43021403	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43021404	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.176471
8	43021443	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.5
8	43021479	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.2
8	43021486	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.9
8	43021544	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.5
8	43021548	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	43021563	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
8	43021575	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.416667
8	43021577	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.08
8	43021943	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.6
8	43023150	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	43023151	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.166667
8	43026923	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	43029211	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
8	43029280	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43029422	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	43218068	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	43218145	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.2
17	43218514	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.3
17	43219478	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.357143
17	43219496	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.357143
5	43380715	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	43380719	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.307692
5	43380720	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	43381559	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	43381597	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.222222
5	43381606	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.25
5	43381639	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.1
6	43615435	A->G	+	ENSG00000170734	POLH	protein_coding	three_prime_utr	.	.	Alu	0.2
12	43787802	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0441176
12	43787807	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.107692
12	43787828	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.220339
12	43787848	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.113636
12	43787870	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.103448
12	43787871	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	43788748	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.926829
12	43788752	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	43788772	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.138462
6	44449399	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.363636
6	44449405	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	44449422	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	44450098	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.2
6	44450138	A->G	+	ENSG00000096401	CDC5L	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	44578744	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
7	44578754	A->G	-	ENSG00000158604	TMED4	protein_coding	three_prime_utr	.	.	Alu	0.04
3	44749132	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.103448
3	44749144	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.25
3	44749145	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	44749170	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	44749199	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	44749207	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	44749265	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.08
3	44749267	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.416667
3	44749281	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.538462
3	44749289	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.48
3	44749367	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.444444
3	44749387	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.470588
3	44749411	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	44749829	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.5
3	44749851	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.545455
3	44749944	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	44749950	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	44750055	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	44750061	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	44750062	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.461538
3	44750078	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	44801890	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.772152
7	44801894	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0506329
7	44801910	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0217391
7	44801912	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.032967
7	44801920	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.26087
7	44801990	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	44802249	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.275
7	44802258	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.047619
7	44802329	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.533333
7	44802332	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.119403
7	44802334	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	44802383	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0224719
7	44802423	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0431034
7	44829479	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0253165
7	44829493	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0246914
20	45077457	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.150376
20	45077460	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0673401
20	45077525	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0294118
20	45078229	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.113636
20	45078299	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.164179
20	45078305	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0660377
20	45078306	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.353211
20	45078309	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.058296
20	45078310	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0765766
20	45078323	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.045
20	45078347	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0954545
20	45078396	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.032967
20	45079068	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.286245
20	45079095	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0408922
20	45079118	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0742574
20	45079130	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.162162
20	45079135	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.637168
20	45079144	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0815451
20	45079149	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0707965
20	45079173	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0542986
20	45079198	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.135135
20	45079200	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0603774
20	45079201	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.45
20	45079204	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0890688
13	45334144	A->G	-	ENSG00000133112	TPT1	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	45340841	A->G	+	ENSG00000100376	FAM118A	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	45549573	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	45549673	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	45549717	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	45549761	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	45550071	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	45550082	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.5
19	45550101	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	45550111	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.3
19	45551245	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	45680550	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	45680551	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	45680555	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.2
3	45680563	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.2
3	45680608	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.7
3	45680761	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.3
3	45680795	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	45680849	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.2
3	45680998	A->G	+	ENSG00000144791	LIMD1	protein_coding	three_prime_utr	.	.	Alu	0.2
20	45884999	A->G	+	ENSG00000168612	ZSWIM1	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	46603813	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	46604704	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.272727
X	46604705	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.3
X	46605899	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	46605911	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	46605974	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.1
X	46605988	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	46677677	A->G	-	ENSG00000175220	ARHGAP1	protein_coding	three_prime_utr	.	.	Alu	1
8	47977073	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.238095
8	47977099	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
8	47977112	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.137931
8	47977113	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	47977549	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.428571
8	47977554	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.333333
8	47977633	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
8	47977687	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.16129
8	47977712	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	47977728	A->G	+	ENSG00000104738	MCM4	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	48352384	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.2
16	48352390	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	48352391	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0425532
16	48352443	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.146341
16	48352444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0731707
16	48352513	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	48352514	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
16	48353264	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.283019
16	48353268	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0851064
16	48353290	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	48353296	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0681818
16	48353304	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.075
16	48353305	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	48353367	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.08
16	48353385	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.129032
16	48353439	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
16	48353444	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
16	48354347	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.08
16	48354469	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	48354470	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	48354471	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.136364
16	48354472	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.26087
16	48354483	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.178571
19	48453396	A->G	+	ENSG00000105447	GRWD1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	48453467	A->G	+	ENSG00000105447	GRWD1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
X	48578548	A->G	+	ENSG00000102317	RBM3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	48748204	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0487805
3	48749558	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.225806
3	48749578	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.125
3	48749609	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.104651
3	48749618	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0315789
3	48749652	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.043956
3	48749685	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.025641
3	48749759	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	48750019	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	48750107	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	48750129	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0454545
3	48750147	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.278689
3	48750201	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0357143
3	48750235	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	48750239	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.031746
3	48750241	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.138462
3	48750251	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.183333
3	48750262	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	48750263	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.09375
3	48750281	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.123288
3	48750282	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.108108
3	48750300	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0447761
3	48750301	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0298507
3	48750423	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.434783
3	48750473	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.04
3	48750476	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.755102
17	48864316	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	49415261	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0701754
3	49415288	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0517241
3	49415354	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.075
3	49415465	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0810811
3	49415466	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	49830409	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.2
17	49831106	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.222222
10	49973404	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.263158
10	49973405	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.166667
10	49973420	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.125
10	49973421	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.4375
10	49973474	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.277778
10	49973494	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.411765
10	49973497	A->G	+	ENSG00000204152	TIMM23B	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	50105351	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	50105383	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.266667
16	50105417	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.538462
16	50105572	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.37931
16	50105604	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.428571
16	50105615	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.277778
16	50105651	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.148148
16	50105652	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.185185
16	50105669	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.185185
16	50105681	A->G	+	ENSG00000155393	HEATR3	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	50325958	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.2
14	50326069	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	50326070	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	50326119	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	50326179	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.333333
14	50326985	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	50327099	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50327103	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	50327198	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.6
14	50327317	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	50327322	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.666667
14	50327323	A->G	+	ENSG00000125375	ATP5S	protein_coding	three_prime_utr	.	.	Alu	0.5
16	50673193	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0218978
20	50877802	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.133333
20	50877816	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.214286
20	50878270	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.375
20	50878274	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.176471
20	50878287	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.142857
20	50878417	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	50878700	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	50882127	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	50930336	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.191489
12	50930339	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.234043
12	50930380	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.129032
12	50930397	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.177778
12	50930406	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0847458
12	50930409	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.280702
12	50930419	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.313725
12	50930441	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0491803
12	50930458	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0517241
12	50930467	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0338983
12	50930475	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.192982
12	50930525	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.06
12	50930530	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	50930539	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0377358
12	50930540	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.132075
12	50930561	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	50930601	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0350877
12	50930640	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	50930653	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.171875
12	50930658	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0322581
12	50930664	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.12963
12	50930683	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.115385
12	50930684	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.254545
12	50930701	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	50930713	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.323944
12	50930723	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.462687
12	50930725	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0447761
12	50930739	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0294118
12	50930762	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.258065
12	50930802	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0481928
12	50930843	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.180556
12	50930844	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.452055
12	50930856	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.582278
12	50930860	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0375
12	50931454	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.571429
12	50931455	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.485714
12	50931463	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	50931493	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	50931497	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	50931504	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.193548
12	50931505	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	50931523	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	50931528	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.130435
12	50931564	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.411765
12	50931568	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	50931590	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.16
12	50931591	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.08
12	50931596	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	50931607	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.3125
12	50931617	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0882353
12	50931632	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0487805
12	50931636	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.159091
12	50931652	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0731707
12	50931657	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.289474
12	50931661	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
12	50931671	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0571429
12	50931693	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	50931694	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	50931752	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.125
12	50931754	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.8
12	50931800	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
12	50931812	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0897436
12	50931825	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.025974
12	50931839	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0759494
17	50964331	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.25
13	51444692	A->G	-	ENSG00000102786	INTS6	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	51910338	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0555556
15	51913757	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	51913758	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	51913774	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	51913775	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	51913812	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.4
15	51913818	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.230769
15	51913933	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.416667
15	51913938	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.5
15	51913957	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.363636
15	51913958	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	51914115	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	51915004	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.545455
19	52031741	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	52031754	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.125
19	52031763	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.266667
19	52031832	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.3
19	52031835	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52031898	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.5
19	52031953	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	52031956	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.714286
19	52031958	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	52032494	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	52032551	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	52032552	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	52032614	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	52032617	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	52032708	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52032709	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.25
19	52556240	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.125
19	52556586	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0740741
13	52691084	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.147059
13	52691217	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.210526
13	52691218	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
13	52691226	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	52703379	A->G	-	ENSG00000213020	ZNF611	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	52703380	A->G	-	ENSG00000213020	ZNF611	protein_coding	three_prime_utr	.	.	Alu	0.0869565
14	52775636	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.25
14	52775658	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
14	52775699	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	52775707	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.173913
14	52775760	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.428571
14	52775770	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.222222
14	52775800	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	52776141	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.217391
14	52776676	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.727273
14	52776720	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	52776724	A->G	-	ENSG00000100522	GNPNAT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	52823198	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.384615
1	52823252	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.444444
1	52823875	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.382353
1	52823898	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0540541
1	52823911	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	52824014	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.645161
1	52824016	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.37037
1	52824086	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	52824087	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.590909
1	52824201	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.347826
1	52824220	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.291667
1	52824268	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.391304
1	52824594	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	52824626	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.26087
1	52825736	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	52825748	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.391304
1	52825753	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	52825762	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	52825763	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.291667
19	52839008	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	52839009	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.103448
19	52839063	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.0652174
19	52839344	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.0888889
19	52878521	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	52880092	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.454545
19	52880097	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.2
19	52880443	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.7
19	53411142	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	53411158	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.4
19	53411195	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.125
19	53411554	A->G	+	ENSG00000196417	ZNF765	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	54237137	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	54237935	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.08
12	54240499	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.225806
12	54240500	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.258065
12	54240516	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	54240522	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.08
X	54560763	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.769231
X	54560992	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.857143
X	54560993	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	54561000	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	54561004	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	54561017	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	54561032	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.25
19	54888983	A->G	+	ENSG00000186431	FCAR	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	55367492	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.8
14	55367498	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.2
14	55367521	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.25
14	55367577	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	55367578	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.769231
14	55367658	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.148148
14	55367661	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	55368248	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.145833
14	55368331	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	55389165	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.470588
19	55389174	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.125
19	55389280	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	55389285	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.212121
19	55390261	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	55390305	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.1
19	55390346	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	55390414	A->G	+	ENSG00000108107	RPL28	protein_coding	three_prime_utr	.	.	Alu	0.125
4	56459955	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	56459960	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	56459965	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	56459990	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	56459993	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	56460020	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.2
4	56460096	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.125
4	56460125	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.583333
4	56460147	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.105263
4	56460155	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	56460163	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	56460709	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.25
4	56460713	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	56460751	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	56460794	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	56460851	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.615385
4	56460891	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	56460892	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	56460916	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.473684
4	56460921	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.85
4	56460926	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	57214615	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	57221311	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	57272806	A->G	+	ENSG00000157500	APPL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	57627206	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	57757017	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.171429
19	57757019	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	57757021	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.0606061
19	57757104	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.147059
19	57757110	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	57807717	A->G	-	ENSG00000178935	ZNF552	protein_coding	three_prime_utr	.	.	Alu	0.45
19	57845743	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57845812	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	57845860	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	57863827	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.1875
19	57863828	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	57864869	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	58127273	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	58318744	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	58318745	A->G	+	ENSG00000163684	RPP14	protein_coding	three_prime_utr	.	.	Alu	0.0377358
18	58752693	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.184211
18	58753294	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.326087
12	59784250	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.8
15	60422185	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	60422188	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	60422727	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.916667
17	62450643	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	63153642	A->G	-	ENSG00000185088	RPS27L	protein_coding	three_prime_utr	.	.	Alu	0.0789474
15	64140640	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.3
15	64142303	A->G	+	ENSG00000028528	SNX1	protein_coding	three_prime_utr	.	.	Alu	0.190476
17	64322773	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
17	64322812	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.037037
17	64322854	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
17	64322880	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
17	64322886	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.165049
17	64322887	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0825688
17	64322889	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0630631
17	64322894	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0357143
17	64322944	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0421053
17	64322997	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.246753
17	64323002	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0649351
12	64448979	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.416667
12	64448989	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.25
12	64449012	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.2
12	64449013	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.2
12	64450281	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.538462
12	64450291	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.615385
12	64450338	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	64450354	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.625
12	64450369	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.583333
17	64468339	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.121212
17	64468347	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.857143
17	64468388	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.08
17	64468389	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.12
17	64468418	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	64468428	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	64468450	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.130435
17	64468454	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	64468455	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	64468498	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	64468523	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.08
17	64468563	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	64468566	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	64483743	A->G	-	ENSG00000089775	ZBTB25	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	65149228	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.0952381
15	65149326	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	65150138	A->G	-	ENSG00000166855	CLPX	protein_coding	three_prime_utr	.	.	Alu	0.3
5	65668097	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.3
11	65775920	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.040404
11	65775921	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.06
11	65775963	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.180328
11	65775967	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.238095
11	65775987	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.12
11	65776002	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0428571
11	65776029	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	65776066	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0263158
11	65776158	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	65776163	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.140351
11	65776164	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0545455
11	65776871	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.178862
11	65776894	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.072
11	65776910	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.232877
11	65776911	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.141844
11	65776912	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
11	65776955	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0733945
11	65776999	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0625
11	65777014	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0375
11	65777019	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.076087
11	65777032	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.195402
11	65777052	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.185185
11	65777096	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.308511
11	65777104	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0253165
12	66123242	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0408163
12	66123404	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0212766
7	66153252	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.049505
7	66153254	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0882353
7	66153262	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0294118
7	66153284	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.043956
7	66153292	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0235294
7	66153308	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0246914
7	66153318	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.037037
7	66153319	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	66153328	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0375
7	66153345	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0697674
7	66153371	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0361446
7	66153389	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.084507
7	66153783	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0240964
7	66153799	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
7	66153805	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.025641
7	66153806	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0375
7	66153872	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0263158
7	66153873	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0519481
7	66153875	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	66153883	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.220339
7	66153889	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
7	66153899	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	66153900	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.125
7	66153941	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0350877
7	66153950	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0754717
7	66153973	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0925926
7	66153993	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0892857
7	66154041	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0545455
7	66154250	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.208333
7	66154255	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.22449
7	66154256	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.22449
7	66154269	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0612245
7	66154276	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0566038
7	66154305	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.54386
7	66154316	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	66154326	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0377358
7	66154342	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.174603
7	66154357	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.1875
7	66154360	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.28125
7	66154366	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0677966
7	66154379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.268657
15	66333542	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.125
15	66333543	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.125
11	66520807	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.4
11	66520854	A->G	-	ENSG00000256349	AP002748.4	protein_coding	three_prime_utr	.	.	Alu	0.2
17	67338740	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.3
17	67338766	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.2
17	67339276	A->G	-	ENSG00000197170	PSMD12	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	67396864	A->G	+	ENSG00000081985	IL12RB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	67409006	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.857143
1	67409013	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.722222
1	67409014	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.647059
1	67409022	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	67409142	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.173913
1	67409166	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.541667
1	67409176	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.818182
1	67409181	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	67409184	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.227273
4	67469377	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.5
4	67469523	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	67469548	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	68755439	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.272727
11	68755857	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	68755869	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.625
11	68755870	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.352941
11	68755879	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.461538
11	68755888	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.647059
11	68755929	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.363636
11	68755931	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.25
11	68755966	A->G	-	ENSG00000110090	CPT1A	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	69322985	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.7
16	69322986	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.6
16	69323011	A->G	-	ENSG00000132612	VPS4A	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	69666043	A->G	-	ENSG00000149716	ORAOV1	protein_coding	three_prime_utr	.	.	Alu	0.217391
10	70149733	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.15
10	70149734	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70248674	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.459459
16	70248678	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0810811
16	70248685	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.135135
16	70248718	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	70248723	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	70248733	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.333333
16	70249181	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.377358
16	70249236	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.14
16	70249315	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.451613
16	70249322	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.2
16	70249335	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.24
16	70249336	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.259259
16	70249757	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	70249811	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0816327
16	70249868	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.1875
16	70249877	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.285714
16	70249888	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0967742
16	70249889	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0645161
16	70249912	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	70369354	A->G	-	ENSG00000258644	SYNJ2BP-COX16	protein_coding	three_prime_utr	.	.	Alu	0.277778
16	70379782	A->G	-	ENSG00000157350	ST3GAL2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
16	70574579	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	70574740	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.178571
12	71702345	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.125
9	71973038	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.153846
10	72234063	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.111111
10	72234081	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.1875
10	72234269	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.363636
10	72234282	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.75
10	72234373	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0483871
10	72234877	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.277778
10	72234879	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.338235
10	72234896	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0508475
10	72234923	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0408163
10	72234931	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0909091
10	72234934	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.511111
10	72234941	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0888889
10	72234949	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.243243
10	72234955	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	72234992	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.131579
10	72235004	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.419355
10	72235030	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	72235031	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.115385
10	72235070	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.4
10	72235076	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.294118
10	72235364	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.272727
10	72235380	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.294118
10	72235443	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0714286
11	72289708	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	72289776	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.1
11	72289826	A->G	-	ENSG00000162129	CLPB	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	72590969	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.583333
15	72591101	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.333333
15	72591102	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.333333
4	73057026	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	73057182	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.545455
4	73057206	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	73057209	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.266667
4	73057247	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.3
4	73057264	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.538462
4	73057326	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.285714
4	73057357	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	73057380	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.25
4	73057732	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.7
4	73057735	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.2
10	73249039	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0909091
10	73249057	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.105263
10	73249059	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.196429
10	73249083	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.175439
10	73249086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0769231
10	73249087	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0714286
10	73249089	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0847458
10	73249118	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.208333
10	73249191	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0333333
10	73249197	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.527273
10	73249827	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.236842
10	73249833	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.1
10	73249893	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	73249962	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	73249963	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.1125
10	73249964	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0246914
10	73250018	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0465116
10	73250023	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.075
10	73250026	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.025641
10	73250043	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0454545
10	73250060	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0519481
10	73250086	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	73250096	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0273973
10	73250163	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.186047
10	73250303	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0392157
10	73250329	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.04
6	73424190	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.416667
6	73424352	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.25
6	73425033	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	73425036	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	73425125	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.388889
6	73425148	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.25
6	73516501	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0245399
6	73516586	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0425532
14	74058205	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	74059451	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	74060242	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.210526
14	74060272	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	74060273	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.6
14	74060281	A->G	-	ENSG00000119711	ALDH6A1	protein_coding	three_prime_utr	.	.	Alu	0.384615
7	74231776	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.214286
7	74231791	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.115385
7	74231817	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	74231862	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	74231952	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
7	74231966	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
11	74455866	A->G	-	ENSG00000175538	KCNE3	protein_coding	three_prime_utr	.	.	Alu	0.5
16	74622454	A->G	-	ENSG00000168411	RFWD3	protein_coding	three_prime_utr	.	.	Alu	0.0943396
14	74735609	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.235294
14	74735669	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.75
14	74735709	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.7
14	74735772	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	74735828	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	74735829	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.375
14	74735841	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.441176
14	74735850	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.107143
14	74735942	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	74735966	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	74736031	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	74736131	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	74736145	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
14	74736153	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.466667
14	74736154	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	74736159	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0625
14	74736248	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	74736259	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.08
14	74736260	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	74736261	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	74736291	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.4
14	74736292	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.3
16	75445412	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0980392
16	75445426	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	75445433	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.185185
16	75445479	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
16	75445496	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.785714
16	75445515	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	75445523	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.171429
16	75445569	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0882353
16	75445570	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	75445572	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.176471
16	75445576	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.27027
16	75445586	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	75445919	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.318182
16	75445921	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	75445933	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.297297
16	75445934	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.210526
16	75445993	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.428571
16	75446009	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.48
16	75446012	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.211538
16	75446066	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	75446075	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.119048
16	75446088	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0416667
16	75446112	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.340909
12	75496034	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.25
12	75496039	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.125
12	75496100	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.4375
12	75496101	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.4
12	75496115	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	75496132	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	75496215	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	75496272	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.866667
12	75496273	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.448276
12	75496308	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.125
12	75496311	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	75496341	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.722222
12	75496353	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.1
16	75599363	A->G	-	ENSG00000065457	ADAT1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	75889193	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	75889212	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	75889326	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.193548
17	75889343	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	75889853	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.1
17	75889858	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.233333
17	75889923	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	75890115	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.108108
17	75890131	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0512821
17	75890168	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	75890211	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.1
4	75917659	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	75917660	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0465116
4	75917693	A->G	-	ENSG00000138744	NAAA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	75942997	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.25
17	75943060	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	75943098	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	75943131	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	75943188	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	75943965	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	75943986	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	75943987	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	75943996	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.571429
17	75944028	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	75944150	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	75944151	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.363636
17	75944152	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	75944218	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.08
17	75944226	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.769231
17	75944794	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.461538
17	75944807	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.357143
17	75944808	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.266667
17	75944836	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	75944837	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	75944851	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.263158
17	75944868	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	75944878	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.208333
17	75944911	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	75944920	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.318182
17	75944928	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.409091
17	75944947	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	75944949	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.285714
17	75944983	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.421053
17	75945013	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.125
17	75945018	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	76205018	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.24
14	76205039	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	76205069	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0512821
14	76207066	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	76779132	A->G	+	ENSG00000092931	MFSD11	protein_coding	three_prime_utr	.	.	Alu	0.2
17	76779133	A->G	+	ENSG00000092931	MFSD11	protein_coding	three_prime_utr	.	.	Alu	0.3
11	77025680	A->G	+	ENSG00000078124	ACER3	protein_coding	three_prime_utr	.	.	Alu	0.75
X	77827502	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.140187
X	77827509	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.137615
X	77827510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.287037
X	77827518	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.037037
X	77827534	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.039604
X	77827544	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.113208
X	77827570	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0288462
X	77827609	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.059322
X	77827610	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.05
X	77827612	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0325203
X	77827619	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
X	77827621	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	77827624	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.184466
X	77827635	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0961538
X	77827682	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	77827686	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0465116
X	77827690	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0322581
X	77827712	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0650407
X	77827729	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0217391
X	77828020	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	77828041	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.175676
X	77828051	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0731707
X	77828055	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	77828077	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.164557
X	77828078	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.102564
X	77828088	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	77828095	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0375
X	77828117	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	77828118	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0958904
X	77828120	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.366197
X	77828144	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.12963
X	77828147	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0634921
X	77828148	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.227273
X	77828155	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0972222
X	77828156	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.138889
X	77828157	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.101449
X	77828159	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0307692
X	77828173	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.107692
X	77828175	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.078125
X	77828176	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.349206
X	77828207	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.078125
X	77828212	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.03125
X	77828226	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.236364
X	77828331	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.551724
X	77828349	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.128713
X	77828382	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.179104
X	77828383	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	77828394	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.583333
X	77828400	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0684932
X	77828403	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0694444
X	77828417	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.378788
X	77828418	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.69697
X	77828442	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0754717
X	77828455	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
X	77828458	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0277778
X	77828467	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0212766
X	77828484	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.149254
X	77828491	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.030303
X	77828503	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0522876
X	77828504	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.369427
X	77828510	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0519481
X	77828520	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.121951
X	77828541	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0709677
X	77828545	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0860927
11	78068904	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	78069026	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.333333
11	78069056	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	78069057	A->G	-	ENSG00000259112	NDUFC2-KCTD14	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	78272262	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.5
9	78272287	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.125
9	78272288	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	78272300	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.217391
9	78273704	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.5
9	78273729	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.636364
9	78275404	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	78275676	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	78275699	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.125
9	78275836	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.0833333
9	78275840	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.26087
9	78275850	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	80627470	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0689655
5	80627474	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.310345
5	80627492	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	80627510	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.193548
5	80627515	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.103448
5	80627516	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.103448
5	80627542	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.12
5	80627559	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	80627611	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.692308
5	80628007	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.2
5	80628024	A->G	-	ENSG00000228716	DHFR	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	83005409	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.25
15	83005449	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.0625
15	83005485	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	83005573	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.15
15	84642218	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.333333
15	84642228	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.142857
15	84642257	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.5
15	84642271	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.363636
15	84642277	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.272727
2	85319275	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0491803
2	85319328	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.03125
2	85319334	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.10101
2	85319342	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	85319351	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0990991
2	85319394	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0421053
2	85319396	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.029703
2	85319449	A->G	-	ENSG00000152291	TGOLN2	protein_coding	three_prime_utr	.	.	Alu	0.0568182
2	85610227	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	85610231	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	85610232	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.357143
2	85610242	A->G	-	ENSG00000168887	C2orf68	protein_coding	three_prime_utr	.	.	Alu	0.25
2	86022807	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.125
2	86022839	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	86024902	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.318182
2	86024915	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.08
2	86024920	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.28
4	88261759	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.075
1	89182510	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	89182517	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.115385
1	89182578	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.25
1	89182620	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	89182698	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	89182706	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.28125
1	89182709	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.139535
1	89182752	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0309278
1	89183631	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0487805
1	89183644	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.257576
1	89183686	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.273381
1	89183696	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.27027
1	89183712	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0819672
1	89183741	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0619469
1	89183779	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.431579
1	89183780	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0978261
1	89183797	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.03125
1	89183804	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.107843
1	89183811	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0272727
1	89183839	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0806452
1	89183858	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	89183860	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.0583333
1	89183866	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.444444
1	89183874	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.378641
1	89183877	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.311321
16	89563498	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.133333
16	89563592	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.3
16	89563618	A->G	+	ENSG00000167526	RPL13	protein_coding	three_prime_utr	.	.	Alu	0.625
6	89634503	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.3125
6	89634886	A->G	-	ENSG00000083099	LYRM2	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	89740473	A->G	+	ENSG00000158805	ZNF276	protein_coding	three_prime_utr	.	.	Alu	0.025641
15	90276276	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	90385953	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.125
7	90386577	A->G	+	ENSG00000105793	GTPBP10	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	92090369	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.666667
7	92090370	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.666667
7	92090537	A->G	+	ENSG00000127914	AKAP9	protein_coding	three_prime_utr	.	.	Alu	0.2
9	93448372	A->G	-	ENSG00000188938	FAM120AOS	protein_coding	three_prime_utr	.	.	Alu	0.0408163
9	93448441	A->G	-	ENSG00000188938	FAM120AOS	protein_coding	three_prime_utr	.	.	Alu	0.08
11	93735605	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.25
11	93735606	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.0638298
11	93735630	A->G	-	ENSG00000166012	TAF1D	protein_coding	three_prime_utr	.	.	Alu	0.469388
3	94127965	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.1
3	94127966	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.1
3	94128103	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.125
3	94128104	A->G	+	ENSG00000178694	NSUN3	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	94792296	A->G	+	ENSG00000156162	DPY19L4	protein_coding	three_prime_utr	.	.	Alu	0.8
5	96917825	A->G	+	ENSG00000164308	ERAP2	protein_coding	three_prime_utr	.	.	Alu	0.027027
8	97726819	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0862069
8	97726820	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.15
8	97726929	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0240964
8	97726932	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.032967
8	97726959	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0540541
8	97726980	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.037037
8	97726981	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0357143
8	97727236	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0540541
8	97727244	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0571429
8	97727245	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0425532
8	97727253	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0357143
8	97728666	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.185714
8	97728667	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.239437
8	97728672	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.272727
8	97728688	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.183673
8	97728707	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.142857
8	97728712	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0612245
8	97728750	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.423077
12	98548843	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	98548865	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	98548910	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.522222
12	98548917	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	98548918	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.107527
12	98548920	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.189474
12	98549027	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	98549030	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0707965
12	98549042	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.163043
12	98549046	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.650485
12	98549053	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	98549069	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0754717
12	98549102	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0652174
12	98549107	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.922222
12	98549108	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.449438
12	98549125	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0851064
12	98549126	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.152941
12	98549225	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0542636
12	98549233	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.55303
12	98549240	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.15625
12	98549255	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	1
12	98549264	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.056338
12	98549305	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	98549318	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.675862
12	98549324	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.364865
12	98549325	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.440789
12	98549371	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.104294
12	98549384	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	98549404	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.147208
12	98549423	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.107692
12	98549424	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0255102
12	98733668	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	98869534	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.5
6	98869547	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.2
6	98873697	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.285714
6	98873710	A->G	-	ENSG00000112234	FBXL4	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	99195820	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	99195826	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.32
2	99195827	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.192308
2	99195848	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.172414
2	99195867	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	99195873	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.535714
2	99195951	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	99195966	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.352941
2	99195984	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.583333
2	99195987	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.25
2	99196001	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	99196002	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	99196324	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	99196345	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.347826
2	99196352	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.291667
2	99196354	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.217391
2	99196380	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	99196394	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.222222
2	99196430	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	99196434	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.538462
2	99196515	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	99196525	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.25
2	99196540	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.125
2	99196552	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	99196557	A->G	+	ENSG00000185414	MRPL30	protein_coding	three_prime_utr	.	.	Alu	0.357143
10	100232437	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.102041
10	100232510	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.16
10	100232524	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.190476
10	100232550	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.6
10	100232551	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.76
10	100232557	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.36
10	100232668	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.2
10	100232677	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
10	100232926	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0972222
10	100232927	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.057971
10	100233024	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.0441176
10	100233026	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.358209
10	100233036	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.413333
10	100233048	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.056338
10	100233053	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.371429
10	100233065	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.135593
10	100233091	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.178571
10	100233121	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.114286
10	100233141	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.428571
10	100233142	A->G	-	ENSG00000095485	CWF19L1	protein_coding	three_prime_utr	.	.	Alu	0.34375
7	100399968	A->G	+	ENSG00000085514	PILRA	protein_coding	three_prime_utr	.	.	Alu	0.0650888
X	101009669	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	101009673	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	101009678	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	101009679	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	101009685	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	101010290	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.103448
X	101010296	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.322581
X	101010300	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.28125
X	101010329	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	101010330	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	101010355	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.357143
X	101010360	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.304348
X	101010402	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	101010404	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.47619
X	101010408	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	101091477	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	101091517	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.206897
7	101091531	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	101091569	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.210526
7	101091571	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.210526
7	101091573	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	101091576	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.157895
7	101091593	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.444444
7	101091606	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.136364
7	101091607	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.409091
7	101091612	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.26087
7	101093709	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	101093710	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.111111
7	101093715	A->G	+	ENSG00000169871	TRIM56	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	101271386	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.103093
2	101271398	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.123288
2	101271399	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0416667
2	101271400	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0434783
2	101271417	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.025974
2	101271421	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.109589
2	101271425	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0238095
2	101271520	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0443038
2	101271532	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0676692
2	101271537	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0661765
2	101271546	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0610687
2	101271549	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0218978
2	101271556	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0252101
2	101271575	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0254237
3	101823506	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.130435
3	101823564	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	101823592	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.205128
3	101823666	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	101823728	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	101823803	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.368421
3	101823929	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	101823964	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.15
3	101823970	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	101823993	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.173913
3	101824560	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	101824664	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.36
3	101824679	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.25
14	102036946	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.166667
14	102036976	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.142857
7	102449344	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	102449568	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0508475
7	102450004	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.09375
7	102451036	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	102753838	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0571429
4	102753890	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	102753947	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	105049680	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.104439
12	106325631	A->G	+	ENSG00000166046	TCP11L2	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	106666052	A->G	+	ENSG00000130348	QRSL1	protein_coding	three_prime_utr	.	.	Alu	0.0652174
6	106666058	A->G	+	ENSG00000130348	QRSL1	protein_coding	three_prime_utr	.	.	Alu	0.08
6	108042691	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.952381
11	108365742	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.55
11	108365750	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.368421
11	108365758	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.318182
11	108365759	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.347826
11	108365794	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0952381
11	108365796	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.28
11	108365797	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.125
11	108365864	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0416667
11	108365867	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0405405
11	108365869	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.027027
11	108365873	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0266667
11	108365882	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0416667
11	108365908	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0793651
11	108365909	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.145161
11	108367011	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0909091
11	108367088	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.147059
11	108367105	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0483871
11	108367117	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0769231
11	108367127	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	108367153	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0465116
11	108367172	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0625
11	108367226	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.291667
11	108367230	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.318182
11	108367248	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.185185
11	108367249	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.357143
11	108367261	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.178571
12	108786648	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
6	109463083	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	109463124	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.3125
6	109463125	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.151515
6	109463151	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.121212
6	109463257	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.15
6	109464706	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.4
6	109464711	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.117647
6	109464743	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	109689108	A->G	-	ENSG00000138794	CASP6	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	112143409	A->G	-	ENSG00000255292	AP002884.3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	112576837	A->G	+	ENSG00000125630	POLR1B	protein_coding	three_prime_utr	.	.	Alu	0.3
9	112684279	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	112684306	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	112684353	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.190476
9	112684431	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.125
9	112684441	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.526316
9	112684444	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	112684445	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	112684466	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.1
9	112684467	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.210526
9	112684470	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	112684505	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.545455
9	112684549	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.357143
9	112685300	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.25
9	112686593	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	112686634	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.5
9	112686661	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.238095
9	112686664	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
9	112686770	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.428571
9	112686771	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.25
5	115829866	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	115829894	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	115829935	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.208333
5	115830034	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0967742
5	115830653	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0517241
5	115830789	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0265487
12	116714628	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.190476
12	116715105	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.08
12	116715113	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	116715123	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	116715180	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.222222
11	119001815	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	119394843	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.423077
X	119538598	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.15
X	119538614	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	119538615	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	119538639	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.148148
X	119538668	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	119538678	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	119538708	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.25
X	119538709	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.257143
X	119539275	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.348837
X	119539287	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.217391
X	119539288	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.0888889
X	119539306	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	119539340	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.1
X	119539365	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.347826
X	119539368	A->G	-	ENSG00000018610	CXorf56	protein_coding	three_prime_utr	.	.	Alu	0.208333
10	119573229	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.307692
10	119573235	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	119573245	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.266667
10	119573274	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.133333
X	120437883	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.034188
X	120437993	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0481928
X	120437994	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0632911
X	120438106	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0434783
12	120460750	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.714286
12	120460751	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.2
12	120460842	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.15
12	120460854	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	120460855	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.2
12	120460858	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	120460894	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.2
12	120460911	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.7
12	120461140	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.615385
12	120461175	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.3125
12	120461196	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	120461208	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.625
12	120461261	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	120461272	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.736842
12	120461365	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.2
12	121778329	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0461538
12	121778339	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0296296
12	121778368	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.0300752
12	121778420	A->G	-	ENSG00000139725	RHOF	protein_coding	three_prime_utr	.	.	Alu	0.04
5	122027179	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.269231
5	122027180	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.269231
5	122027209	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.1
12	123411103	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	123411110	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.272727
12	123412196	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.363636
12	123412413	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	123412414	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	123412436	A->G	-	ENSG00000150977	RILPL2	protein_coding	three_prime_utr	.	.	Alu	0.4375
12	123661520	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.294118
12	123661530	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	123661548	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.538462
12	123661553	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	123661590	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	123661768	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	123661770	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.15
12	123661824	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.26087
12	123661825	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	123661849	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.5
12	123661862	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	123661870	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	123662018	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.115385
12	123662050	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.52
X	123909158	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.153846
X	123909293	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.12
X	123909305	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123910606	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.111111
X	123910682	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.162162
X	123911531	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	123911535	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
X	123911593	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	123912452	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.184211
X	123912456	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0512821
X	123912479	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123912488	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.729167
X	123912567	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.259259
X	123912590	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.62963
X	123912741	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.928571
X	123912748	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.6
X	123912749	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.866667
X	123912792	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
X	123912830	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.291667
X	123912836	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.185185
X	123912839	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.5
X	123912845	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.25
X	123912853	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.136364
X	123912865	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.16129
X	123912870	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.741935
X	123912891	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.138889
X	123912906	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	123912907	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0606061
X	123912908	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.125
X	123912920	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	123912922	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	123912929	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	123913015	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	123913039	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	123913043	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	123913198	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	123913257	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.25
X	123913262	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	123913295	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0740741
X	123913296	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0666667
X	123913315	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.266667
X	123913318	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	123913319	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	123913320	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.148148
X	123913323	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.407407
X	123913420	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.285714
12	125026680	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.2
12	125029258	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	125029466	A->G	+	ENSG00000184992	BRI3BP	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	126625355	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.12
5	126625387	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.25641
5	126625436	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0625
5	126625438	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0645161
5	126625454	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0952381
5	126625474	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.25
5	126625476	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	126625477	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	126625512	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.08
5	126625518	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0689655
5	126625547	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	126625554	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.208333
5	126625741	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.15
5	126625755	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.538462
5	126625763	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.210526
5	126625771	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	126625781	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.1875
5	126625802	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	126625840	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.357143
5	126625842	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.277778
5	126625856	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	126625862	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.25
5	126625881	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.115385
5	126625931	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.26087
5	126625956	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.263158
5	126625957	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.315789
5	126626118	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.291667
5	126626338	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	126626387	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	126626392	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.1
5	126626477	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.125
5	126626483	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126626484	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.2
5	126626616	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	127843852	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.3
2	127843890	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	127843982	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	127844792	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.727273
2	127845461	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.5
2	127846037	A->G	-	ENSG00000144231	POLR2D	protein_coding	three_prime_utr	.	.	Alu	0.3
2	128192901	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	128192917	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	128193272	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.545455
2	128193506	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.75
2	128193520	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	128193521	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	128194146	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	128194149	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	128194192	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.363636
2	128194541	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	128195103	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.12
2	128195104	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	128195125	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
9	128305415	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.125
9	128305440	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	128305442	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128305476	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.3
9	128305477	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.2
9	128308787	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
9	128308789	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128308828	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128308835	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.461538
9	128309254	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.325
7	128502830	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128503235	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	128503539	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	128503568	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.818182
7	128503891	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131162200	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.12
5	131162260	A->G	-	ENSG00000169567	HINT1	protein_coding	three_prime_utr	.	.	Alu	0.269231
5	131201061	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.545455
5	131201062	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	131201149	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131201152	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	131201153	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	131201154	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	131201167	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.125
5	131201175	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	131201193	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.466667
5	131201199	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131201274	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.130435
5	131201639	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131201664	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.571429
5	131201694	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.777778
5	131201710	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.5
5	131201838	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.470588
5	131201874	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131202409	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131202581	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.4
5	131204142	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	131204153	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131204168	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.25
5	131204197	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	131204202	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.125
5	131204218	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	132721316	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.04
12	132721318	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.857143
12	132721348	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.116279
12	132721356	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.04
12	132721370	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.339623
12	132721375	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.12069
12	132721388	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.172414
12	132721433	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0576923
12	132721435	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	132721436	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	132721439	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0392157
12	132721441	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0392157
12	132721448	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	132721467	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.173913
12	132721471	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0697674
12	132721473	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0465116
12	132721483	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.27027
12	132721509	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.393939
12	132721535	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.545455
12	132721539	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.136364
12	132721668	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.344828
12	132721669	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.413793
12	132721689	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.212121
12	132721693	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	132721706	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	132721717	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	132721753	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.744681
12	132721754	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	132721763	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	132721831	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.533333
12	132721837	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.895833
12	132721879	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.14
12	132722331	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.114286
12	132722351	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	132722352	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.116279
12	132722368	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	132722416	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0888889
12	132722472	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0652174
12	132769969	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0967742
12	132769978	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	132770000	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.172414
5	134402261	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	134402273	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0740741
5	134402494	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	134900597	A->G	+	ENSG00000113621	TXNDC15	protein_coding	three_prime_utr	.	.	Alu	0.2
9	134906027	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.384615
9	134906059	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.461538
9	134906064	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	134906134	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.388889
9	134906135	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.111111
9	134906173	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.1875
9	134906200	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.444444
9	134906214	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.5
9	134906230	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.178571
9	134906814	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.272727
9	134906827	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.439024
9	134906828	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.325581
9	134906853	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	134906866	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	134906879	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
9	134906905	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.309524
9	134906908	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	134906963	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
9	134906996	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.1
9	134907015	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.3125
5	134960828	A->G	+	ENSG00000132570	PCBD2	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	139045647	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.123894
4	139045723	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.282258
3	141946785	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.714286
3	141946786	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.428571
3	141946787	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	141948285	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.571429
3	141948307	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.909091
3	141948325	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.727273
3	141948848	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.26087
3	141948860	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	141948861	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	141948915	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.470588
3	141948991	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	141949872	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	141949877	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	141949878	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	141949916	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	141949936	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	141949989	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.2
3	141950000	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	141950026	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	141950079	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.190476
3	141950080	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.409091
3	141950096	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.56
1	145745244	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0789474
1	145745275	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0882353
1	145745297	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.179487
1	145745324	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	145745363	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	145745364	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	145745370	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.517241
1	145745384	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	145745386	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	145745394	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.190476
1	145745519	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.75
1	145745521	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.714286
1	145745550	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.533333
1	145745554	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.5
1	145745595	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	145745596	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.4
1	145746104	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	145746114	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	145746126	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	145746143	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.291667
1	145746144	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	145746149	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	145746163	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	145921979	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.142857
1	145921980	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.142857
1	145921994	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.0869565
1	145921998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.130435
1	145922061	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.105263
1	145922969	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.176471
1	145922994	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.142857
1	145922998	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.153846
1	145923018	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.4
1	145923033	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.363636
1	145923078	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.307692
1	145923094	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.428571
1	145923163	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.642857
1	145923202	A->G	-	ENSG00000211451	GNRHR2	transcribed_unitary_pseudogene	three_prime_utr	.	.	Alu	0.153846
6	149448035	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.0645161
6	149448047	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.09375
6	149448457	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.16
6	149448486	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	149591088	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
6	149591171	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.09375
6	149591241	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.08
6	149591247	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	149983651	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	149983655	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.393939
5	149983656	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	149983829	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.384615
5	149983851	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	149984404	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.25
5	149984405	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.235294
5	149984540	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.130435
1	150308577	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150308645	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	150308656	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	150308716	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	150308742	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	150308756	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	150621411	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	150621412	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.185185
1	150621414	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.259259
1	150621549	A->G	-	ENSG00000143420	ENSA	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	150731136	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.360544
1	150731137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.664384
1	150731143	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.136986
1	150731144	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0344828
1	150731153	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0671141
1	150731158	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	150731166	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.025974
1	150731171	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.12069
1	150731185	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	150731196	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.125
1	150731200	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.106667
1	150731203	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0684932
1	150731216	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.186047
1	150731220	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0379747
1	150731221	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.303797
1	150731222	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.3
1	150731225	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0612245
1	150731231	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0566038
1	150731239	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.108911
1	150731240	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.07
1	150731244	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	150731266	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	150731269	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	150731270	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0273973
1	150731276	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.385965
1	150731279	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0290698
1	150731288	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.191571
1	150731301	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0664962
1	150731305	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.115979
1	150731306	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0820513
1	150731311	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.579365
1	150731326	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0373832
1	150731336	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.135266
1	150731362	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.122857
1	150731374	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.687023
1	150731384	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.131991
1	150731386	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0496614
1	150731936	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.159915
1	150731937	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.429487
1	150731942	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.230415
1	150731972	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0572207
1	150732000	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.32381
1	150732005	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.130268
1	150732007	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.170819
1	150732010	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.149007
1	150732024	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0431034
1	150732068	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0789474
1	150732072	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0353261
1	150732092	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0474684
1	150732109	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	150732111	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.167235
1	150732129	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0892857
1	150732137	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.249406
1	150732157	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.544474
1	150732160	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.401617
1	150732177	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.125874
1	150732178	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.322727
1	150732183	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.122172
1	150732184	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.103837
1	150732736	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0356364
1	150732740	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0315615
1	150732745	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0514981
1	150732767	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0475382
1	150732772	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.116398
1	150732802	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0979079
1	150732810	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0463918
1	150732856	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0482595
1	150732881	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0212245
1	151123394	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
5	151268183	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.484848
5	151268295	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0322581
5	151268335	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0227273
5	151268338	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	151874499	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0731707
1	151874503	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	151874535	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0612245
1	151874621	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0638298
1	151874634	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0784314
X	154011236	A->G	-	ENSG00000184216	IRAK1	protein_coding	three_prime_utr	.	.	Alu	0.0232558
1	155881829	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	155881846	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0465116
1	155883428	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	155883460	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	156540349	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.06
3	156540416	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.557143
3	156540438	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.116667
3	156540441	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.241935
3	156540447	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.046875
3	156540484	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.7
3	156540494	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.645161
3	156540506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.151515
3	156540519	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.410256
3	156540530	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.657895
3	156541440	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	156541499	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	156541506	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.193548
3	156541551	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.1
3	156541552	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0961538
3	156541574	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.104478
3	156541578	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0882353
3	156541617	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.453125
3	156541618	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.365079
1	156722886	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	1
7	156970054	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.4
7	156970129	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.214286
7	156970130	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.2
7	156970189	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.466667
7	156970230	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	156971419	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	156971436	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.25
7	156971486	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.478261
7	156971520	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
7	156971572	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
7	156971573	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	160996511	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0752688
1	160996554	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0337079
1	160996561	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.380952
1	160996562	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.423529
1	160996563	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.164706
1	160996583	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0322581
1	160996603	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0634921
1	160996618	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0535714
1	160996628	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.137255
1	160996644	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.666667
1	160998026	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	160998043	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	160998066	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	160998067	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	160998100	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.170732
1	160998101	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.1
1	160998109	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.097561
1	160998148	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.244898
4	165076859	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	165077490	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	165077502	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.1875
4	165077503	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	165078036	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	165078037	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.125
1	168244413	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0428571
1	168244441	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0405405
1	168249284	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.156863
1	168249305	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	168249335	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	168249336	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
1	168251048	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	168251049	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	168251103	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	168251169	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.119048
1	168251251	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.136364
5	168549888	A->G	-	ENSG00000120137	PANK3	protein_coding	three_prime_utr	.	.	Alu	0.0294118
4	176331857	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0205128
1	179073562	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	179073566	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	179074965	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.208333
1	179074970	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	179357400	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.25
1	179357403	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.25
3	179397767	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	179397778	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0645161
3	179397783	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.206349
3	179397789	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0833333
3	179397833	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.1
3	179397839	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.833333
3	179397847	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.318182
3	179397857	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	179397868	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	179397907	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.2
3	179397993	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.125
3	179397996	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.411765
3	179398001	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	179398002	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	179398008	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.263158
3	179398010	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	179398024	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	179398349	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	179398352	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	179398358	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.461538
3	179398366	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	179398367	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	179398387	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	179398429	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.6
3	179399245	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.204082
3	179399260	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	179399314	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	179399340	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.233333
3	179399376	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0512821
3	179399454	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0465116
3	183491386	A->G	-	ENSG00000172578	KLHL6	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	184791989	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.358974
1	184791990	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	184791991	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.205882
1	184792028	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	184792045	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0697674
1	184792054	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.122449
1	184792136	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0612245
1	184792137	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0784314
1	184792140	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	184792178	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	184792186	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.139535
1	184792213	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0588235
1	184792214	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.1
1	184792216	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.375
1	184793326	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	184793338	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.22449
1	184793339	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0510204
1	184793351	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0704225
1	184793353	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.15493
1	184793364	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0333333
1	184793373	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	184793376	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.05
1	184793388	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0232558
1	184793390	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.258427
1	184793447	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.232143
1	184793448	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.037037
1	184793456	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.267857
1	184793493	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0735294
1	184793499	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0461538
1	184793542	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.410256
3	194641711	A->G	-	ENSG00000041802	LSG1	protein_coding	three_prime_utr	.	.	Alu	0.0681818
3	196352418	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.269231
3	196352422	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.25
3	196352434	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	196352512	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.230769
3	196352519	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	196352541	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	196352735	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	196352737	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.578947
3	196352749	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.529412
3	196352750	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.375
3	196352812	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.615385
3	196352820	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.666667
3	196352826	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.333333
3	196352835	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.15
3	196352843	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.238095
3	196353657	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	196353660	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.138889
3	196353729	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	196353753	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	197884875	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.2
3	197885349	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.235294
3	197885355	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	197885356	A->G	+	ENSG00000186001	LRCH3	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	200977594	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.2
2	200977600	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.605263
2	200977668	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.485714
2	200977678	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	200977685	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.103448
2	200977694	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.484848
2	200977703	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.137931
2	200977711	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	200977756	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.323529
2	200977769	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.34375
2	200977821	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	200977838	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.454545
2	200977846	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	200978572	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.526316
2	200978587	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.470588
2	200978680	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.1
2	200978741	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.421053
2	200978742	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	200978747	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.473684
2	200978748	A->G	-	ENSG00000155744	FAM126B	protein_coding	three_prime_utr	.	.	Alu	0.764706
2	201164002	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0958904
2	201164004	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0289855
2	201164010	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0694444
2	201164011	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0821918
2	201164080	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.026087
2	201164088	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	201164104	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0325203
2	201164109	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.032
2	201164138	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0380952
2	201164144	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.167939
2	201165371	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.265625
2	201167246	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0238095
2	201217945	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.377358
2	201218007	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.375
2	201218013	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.234043
2	201218014	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0612245
2	201218039	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.25641
2	201218334	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	201218512	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0638298
2	201218522	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	201219050	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.107692
2	201219092	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.031746
2	201219149	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	201219150	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	201219176	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.104167
2	201219195	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.269231
2	201286715	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.119048
2	201286733	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	201287278	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.14
2	201287339	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.129032
2	201287355	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.1
2	201287363	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	201287383	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.4
2	201287385	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	202879068	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	202879382	A->G	-	ENSG00000183155	RABIF	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	202880313	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	202880331	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	203297313	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	203297314	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297519	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	203297587	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	203297768	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297792	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	203297838	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	203297864	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	203297865	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	203297930	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	203297942	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	203305461	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.238095
2	203305462	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	203305474	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	206118543	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	206118574	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	206122202	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.4
2	206122212	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	206122372	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	206122384	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.466667
2	206122385	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	206122412	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	206122417	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	206122418	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.416667
2	206122546	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.8125
2	206122801	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	206122808	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	206122828	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	206122837	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	206123007	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	206123008	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	206123014	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.3
2	207754653	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.5625
2	207754677	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	207754690	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
2	207754697	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	207754737	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	207754738	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.24
2	207754755	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.842105
2	207754767	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	207754779	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.26087
2	207754926	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.428571
2	207754938	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	207754945	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	207754951	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	207754969	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	207754975	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	207755018	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.789474
2	207755025	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.947368
2	207755051	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	207755065	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	207755146	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	207755281	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	207755398	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	212816223	A->G	+	ENSG00000203705	TATDN3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	216038703	A->G	-	ENSG00000115425	PECR	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	216038775	A->G	-	ENSG00000115425	PECR	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	216038821	A->G	-	ENSG00000115425	PECR	protein_coding	three_prime_utr	.	.	Alu	0.227273
2	216501776	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.217391
2	216501792	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.26087
2	216501798	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	216501818	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.136364
2	216501857	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.391304
2	216501901	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.1
2	216501919	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	216501921	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	216502143	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	216502145	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	216502198	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	216502236	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	216502242	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.206897
2	216502247	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0967742
2	216502248	A->G	+	ENSG00000197756	RPL37A	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	219075517	A->G	-	ENSG00000187736	NHEJ1	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	219075574	A->G	-	ENSG00000187736	NHEJ1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	220058028	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	220058711	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	220058724	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.1875
1	220058796	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	220058801	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.8
1	220058802	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.9
1	225786972	A->G	+	ENSG00000143742	SRP9	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	225983639	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.1
1	225983640	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	225983676	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0797546
1	225983677	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	225983699	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.252174
1	225984164	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
1	225984621	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0923077
2	233205624	A->G	+	ENSG00000168918	INPP5D	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	149887298	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.272727
1	149887304	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.916667
1	149887318	A->G	-	ENSG00000184260	HIST2H2AC	protein_coding	CDS	.	.	Alu	0.461538
1	149887567	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.2
1	149887568	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.111111
1	149887575	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.272727
1	149887584	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.685714
1	149887592	A->G	+	ENSG00000184270	HIST2H2AB	protein_coding	CDS	.	.	Alu	0.15625
X	48683272	A->G	+	ENSG00000015285	WAS	protein_coding	five_prime_utr	.	.	Alu	0.166667
12	6943922	A->G	+	ENSG00000111678	C12orf57	protein_coding	five_prime_utr	.	.	Alu	0.5
19	5911749	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.454545
19	5911761	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.142857
19	5911781	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.294118
19	5911810	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.117647
19	5911820	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.277778
19	5911914	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.142857
19	5912094	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.181818
19	5912224	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.2
19	5912744	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.428571
19	5912746	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.153846
19	5912829	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.416667
19	5912870	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.117647
19	5912892	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.125
19	5913477	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.117647
19	5913478	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.235294
19	5913494	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.157895
19	5913563	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.111111
19	5913594	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.142857
19	5913659	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.133333
19	5913674	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.117647
19	5913688	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.125
19	5913692	A->G	+	ENSG00000267571	AC104532.2	antisense	five_prime_utr	.	.	Alu	0.416667
19	8418719	A->G	+	ENSG00000099785	2-Mar	protein_coding	five_prime_utr	.	.	Alu	0.0344828
19	9433785	A->G	-	ENSG00000174652	ZNF266	protein_coding	five_prime_utr	.	.	Alu	0.0555556
1	16594651	A->G	-	ENSG00000219481	NBPF1	protein_coding	five_prime_utr	.	.	Alu	0.25641
1	20774875	A->G	-	ENSG00000127483	HP1BP3	protein_coding	five_prime_utr	.	.	Alu	0.3
1	20774876	A->G	-	ENSG00000127483	HP1BP3	protein_coding	five_prime_utr	.	.	Alu	0.3
1	23959998	A->G	+	ENSG00000189266	PNRC2	protein_coding	five_prime_utr	.	.	Alu	0.15873
2	37316823	A->G	-	ENSG00000115825	PRKD3	protein_coding	five_prime_utr	.	.	Alu	0.486486
2	99156338	A->G	+	ENSG00000144182	LIPT1	protein_coding	five_prime_utr	.	.	Alu	0.105263
3	48708123	A->G	-	ENSG00000068745	IP6K2	protein_coding	five_prime_utr	.	.	Alu	0.363636
4	38805458	A->G	-	ENSG00000174125	TLR1	protein_coding	five_prime_utr	.	.	Alu	0.388889
6	31400375	A->G	-	ENSG00000204520	MICA	protein_coding	five_prime_utr	.	.	Alu	0.166667
6	31400467	A->G	-	ENSG00000204520	MICA	protein_coding	five_prime_utr	.	.	Alu	0.4
8	38247394	A->G	+	ENSG00000085788	DDHD2	protein_coding	five_prime_utr	.	.	Alu	0.7
10	70167520	A->G	-	ENSG00000079332	SAR1A	protein_coding	five_prime_utr	.	.	Alu	0.115385
10	70404398	A->G	+	ENSG00000148730	EIF4EBP2	protein_coding	five_prime_utr	.	.	Alu	0.106061
10	72220129	A->G	+	ENSG00000166295	ANAPC16	protein_coding	five_prime_utr	.	.	Alu	0.0769231
11	46630058	A->G	+	ENSG00000175224	ATG13	protein_coding	five_prime_utr	.	.	Alu	0.0465116
11	62840139	A->G	-	ENSG00000133316	WDR74	protein_coding	five_prime_utr	.	.	Alu	0.157895
11	62840140	A->G	-	ENSG00000133316	WDR74	protein_coding	five_prime_utr	.	.	Alu	0.105263
12	68624695	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.117647
12	68624701	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.105263
12	68641044	A->G	+	ENSG00000127314	RAP1B	protein_coding	five_prime_utr	.	.	Alu	0.181818
14	22913763	A->G	-	ENSG00000100461	RBM23	protein_coding	five_prime_utr	.	.	Alu	0.0740741
14	22917061	A->G	-	ENSG00000100461	RBM23	protein_coding	five_prime_utr	.	.	Alu	0.2
14	22917062	A->G	-	ENSG00000100461	RBM23	protein_coding	five_prime_utr	.	.	Alu	0.133333
14	73903714	A->G	+	ENSG00000258653	AC005520.1	protein_coding	five_prime_utr	.	.	Alu	0.2
16	18900010	A->G	-	ENSG00000157106	SMG1	protein_coding	five_prime_utr	.	.	Alu	0.468085
16	28493723	A->G	-	ENSG00000188603	CLN3	protein_coding	five_prime_utr	.	.	Alu	0.111111
16	70114916	A->G	+	ENSG00000090857	PDPR	protein_coding	five_prime_utr	.	.	Alu	0.545455
17	28672802	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.0833333
17	28672805	A->G	+	ENSG00000109111	SUPT6H	protein_coding	five_prime_utr	.	.	Alu	0.272727
17	68285613	A->G	-	ENSG00000141337	ARSG	protein_coding	five_prime_utr	.	.	Alu	0.05
17	68285618	A->G	-	ENSG00000141337	ARSG	protein_coding	five_prime_utr	.	.	Alu	0.108108
19	12164649	A->G	+	ENSG00000196646	ZNF136	protein_coding	five_prime_utr	.	.	Alu	0.235294
19	14415961	A->G	-	ENSG00000123136	DDX39A	protein_coding	five_prime_utr	.	.	Alu	0.137931
19	16078035	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.027027
19	16081465	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.191176
19	16081535	A->G	+	ENSG00000167460	TPM4	protein_coding	five_prime_utr	.	.	Alu	0.0416667
19	18559203	A->G	+	ENSG00000268030	AC005253.1	antisense	five_prime_utr	.	.	Alu	0.181818
19	18560243	A->G	+	ENSG00000268030	AC005253.1	antisense	five_prime_utr	.	.	Alu	0.133333
19	19672278	A->G	+	ENSG00000181896	ZNF101	protein_coding	five_prime_utr	.	.	Alu	0.125
19	19672279	A->G	+	ENSG00000181896	ZNF101	protein_coding	five_prime_utr	.	.	Alu	0.125
19	37224897	A->G	+	ENSG00000188283	ZNF383	protein_coding	five_prime_utr	.	.	Alu	0.0869565
19	37324887	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.230769
19	37324904	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.25
19	37324914	A->G	+	ENSG00000181666	HKR1	protein_coding	five_prime_utr	.	.	Alu	0.25
19	44662309	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.111111
19	44662389	A->G	+	ENSG00000073008	PVR	protein_coding	five_prime_utr	.	.	Alu	0.133333
19	45855469	A->G	-	ENSG00000125755	SYMPK	protein_coding	five_prime_utr	.	.	Alu	0.357143
19	52728765	A->G	-	ENSG00000213020	ZNF611	protein_coding	five_prime_utr	.	.	Alu	0.111111
19	52728786	A->G	-	ENSG00000213020	ZNF611	protein_coding	five_prime_utr	.	.	Alu	0.384615
19	52728791	A->G	-	ENSG00000213020	ZNF611	protein_coding	five_prime_utr	.	.	Alu	0.454545
21	37410667	A->G	+	ENSG00000157540	DYRK1A	protein_coding	five_prime_utr	.	.	Alu	0.133333
1	179877336	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	five_prime_utr	.	.	Alu	0.0238095
2	131107681	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	five_prime_utr	.	.	Alu	0.0952381
2	131107683	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	five_prime_utr	.	.	Alu	0.0952381
2	131107726	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	five_prime_utr	.	.	Alu	0.0952381
2	190415404	A->G	+	ENSG00000151690	MFSD6	protein_coding	five_prime_utr	.	.	Alu	0.1875
2	232724679	A->G	+	ENSG00000204120	GIGYF2	protein_coding	five_prime_utr	.	.	Alu	0.173913
3	139385189	A->G	-	ENSG00000184432	COPB2	protein_coding	five_prime_utr	.	.	Alu	0.142857
3	179325283	A->G	+	ENSG00000121864	ZNF639	protein_coding	five_prime_utr	.	.	Alu	0.04
4	153702627	A->G	+	ENSG00000137462	TLR2	protein_coding	five_prime_utr	.	.	Alu	0.2
5	163437663	A->G	+	ENSG00000113328	CCNG1	protein_coding	five_prime_utr	.	.	Alu	0.352941
7	100051557	A->G	+	ENSG00000166529	ZSCAN21	protein_coding	five_prime_utr	.	.	Alu	0.3
8	143590715	A->G	-	ENSG00000104529	EEF1D	protein_coding	five_prime_utr	.	.	Alu	0.25
9	120928173	A->G	-	ENSG00000056558	TRAF1	protein_coding	five_prime_utr	.	.	Alu	0.8
9	120928181	A->G	-	ENSG00000056558	TRAF1	protein_coding	five_prime_utr	.	.	Alu	0.5
12	122889639	A->G	-	ENSG00000139722	VPS37B	protein_coding	five_prime_utr	.	.	Alu	0.157895
14	105057962	A->G	-	ENSG00000183484	GPR132	protein_coding	five_prime_utr	.	.	Alu	0.031746
GL000219.1	85486	A->G	-	.	.	.	Intergenic	.	.	Alu	1
GL000219.1	95134	A->G	-	.	.	.	Intergenic	.	.	Alu	1
GL000219.1	99159	A->G	-	.	.	.	Intergenic	.	.	Alu	1
GL000219.1	99260	A->G	-	.	.	.	Intergenic	.	.	Alu	1
KI270713.1	21693	A->G	-	.	.	.	Intergenic	.	.	Alu	0.418605
KI270713.1	21761	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0526316
MT	16519	A->G	-	.	.	.	Intergenic	.	.	Alu	1
MT	263	A->G	+	.	.	.	Intergenic	.	.	Alu	1
X	119624874	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
X	119625002	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.4
X	119630597	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
X	119630609	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
X	119630676	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
X	119653835	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.125
X	119661175	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.272727
X	119661957	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.3
X	119673759	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.117647
X	119674239	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.181818
X	119674259	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
X	119674312	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.2
X	119678030	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
X	119684007	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.166667
X	119684158	A->G	-	ENSG00000125354	6-Sep	protein_coding	Intergenic	.	.	Alu	0.153846
X	1240625	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	1240626	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	1240637	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
X	1270685	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	1
X	1272316	A->G	+	ENSG00000198223	CSF2RA	protein_coding	Intergenic	.	.	Alu	0.538462
X	1311495	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
X	132208223	A->G	-	ENSG00000123728	RAP2C	protein_coding	Intergenic	.	.	Alu	0.157895
X	132210622	A->G	-	ENSG00000123728	RAP2C	protein_coding	Intergenic	.	.	Alu	0.222222
X	1428743	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	1
X	1429253	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.166667
X	1429256	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.333333
X	1429282	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.333333
X	1429286	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.6
X	1440677	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.181818
X	1440717	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.181818
X	1441556	A->G	-	ENSG00000169093	ASMTL	protein_coding	Intergenic	.	.	Alu	0.25
X	149485977	A->G	-	ENSG00000010404	IDS	protein_coding	Intergenic	.	.	Alu	0.230769
X	149485978	A->G	-	ENSG00000010404	IDS	protein_coding	Intergenic	.	.	Alu	0.384615
X	1495599	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	1
X	1504641	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	1
X	15329840	A->G	-	ENSG00000165195	PIGA	protein_coding	Intergenic	.	.	Alu	0.0952381
X	1536576	A->G	-	ENSG00000182162	P2RY8	protein_coding	Intergenic	.	.	Alu	0.037037
X	153911336	A->G	-	ENSG00000089820	ARHGAP4	protein_coding	Intergenic	.	.	Alu	0.25
X	154065563	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.3
X	154067399	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154079307	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.176471
X	154079314	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.111111
X	154088490	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.153846
X	154088513	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.142857
X	154088523	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.2
X	154089086	A->G	-	ENSG00000169057	MECP2	protein_coding	Intergenic	.	.	Alu	0.4
X	154555449	A->G	+	ENSG00000269335	IKBKG	protein_coding	Intergenic	.	.	Alu	0.117647
X	16720827	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.142857
X	16721344	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.28
X	16736573	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.1875
X	16736578	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.333333
X	16736597	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.125
X	16736603	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.1875
X	16736604	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.1875
X	16736621	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.384615
X	16736643	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.5
X	16736649	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.2
X	16736694	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0833333
X	16736697	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.269231
X	16736719	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.09375
X	16736760	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.288889
X	16736770	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0416667
X	16737130	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.224138
X	16737132	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.152542
X	16737192	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0357143
X	16737196	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.245614
X	16737264	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.243243
X	16737274	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.111111
X	16737300	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.111111
X	16737305	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0512821
X	16737337	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.122449
X	16738145	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.421053
X	16738160	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.125
X	16738190	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.166667
X	16738205	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0512821
X	16738229	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.243243
X	16738272	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0625
X	16738294	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.24
X	16738327	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.115385
X	16738378	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.153846
X	16738593	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0909091
X	16738622	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.0769231
X	16745484	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.2
X	16749007	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.181818
X	16749029	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.133333
X	16749244	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.1
X	16750799	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.2
X	16750934	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.125
X	16750967	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.35
X	16751029	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.176471
X	16751197	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.181818
X	16751198	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.181818
X	16752181	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.333333
X	16752252	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.25
X	16754635	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.153846
X	16758067	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.636364
X	16758102	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.307692
X	16758313	A->G	+	ENSG00000169895	SYAP1	protein_coding	Intergenic	.	.	Alu	0.2
X	23701552	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
X	23701568	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
X	23701573	A->G	-	.	.	.	Intergenic	.	.	Alu	0.235294
X	23701610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	23701652	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
X	23701671	A->G	-	.	.	.	Intergenic	.	.	Alu	0.588235
X	23701688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
X	23702067	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	24075837	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.133333
X	24075951	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.157895
X	24075956	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.15
X	24075966	A->G	+	ENSG00000130741	EIF2S3	protein_coding	Intergenic	.	.	Alu	0.208333
X	24078165	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0218579
X	24180048	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.3
X	24180079	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.333333
X	24180085	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.636364
X	24180112	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.7
X	24180482	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.2
X	24180511	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.416667
X	24180527	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.142857
X	24180547	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.416667
X	24180548	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.166667
X	24180563	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.166667
X	24180617	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.5
X	24180621	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.363636
X	24180622	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.4
X	24180644	A->G	+	ENSG00000005889	ZFX	protein_coding	Intergenic	.	.	Alu	0.181818
X	2694487	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.3
X	2739549	A->G	+	ENSG00000002586	CD99	protein_coding	Intergenic	.	.	Alu	0.2
X	2743811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.6
X	296832	A->G	+	ENSG00000182378	PLCXD1	protein_coding	Intergenic	.	.	Alu	0.363636
X	303959	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	313646	A->G	-	ENSG00000178605	GTPBP6	protein_coding	Intergenic	.	.	Alu	1
X	3609634	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.142857
X	3609728	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.1875
X	3609735	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.266667
X	3610370	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.117647
X	3610476	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.190476
X	3707114	A->G	-	ENSG00000183943	PRKX	protein_coding	Intergenic	.	.	Alu	0.153846
X	3826627	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.1
X	3826656	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intergenic	.	.	Alu	0.115385
X	38310128	A->G	-	ENSG00000156313	RPGR	protein_coding	Intergenic	.	.	Alu	0.2
X	41163593	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.166667
X	41164146	A->G	+	ENSG00000124486	USP9X	protein_coding	Intergenic	.	.	Alu	0.153846
X	41345947	A->G	+	ENSG00000215301	DDX3X	protein_coding	Intergenic	.	.	Alu	0.166667
X	48683266	A->G	+	ENSG00000015285	WAS	protein_coding	Intergenic	.	.	Alu	0.166667
X	53084383	A->G	+	ENSG00000184205	TSPYL2	protein_coding	Intergenic	.	.	Alu	1
X	54561640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.09375
X	54562718	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	54563297	A->G	+	.	.	.	Intergenic	.	.	Alu	0.785714
X	54563341	A->G	+	.	.	.	Intergenic	.	.	Alu	0.23913
X	54563624	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
X	54564680	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
X	54565603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
X	54566843	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
X	54566848	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
X	71055130	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	71055291	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
X	71057973	A->G	-	ENSG00000147164	SNX12	protein_coding	Intergenic	.	.	Alu	0.25
X	71293373	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.2
X	71293812	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.470588
X	71293861	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.0967742
X	71293873	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.68
X	71293904	A->G	+	ENSG00000147140	NONO	protein_coding	Intergenic	.	.	Alu	0.193548
X	71564885	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.2
X	71564996	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.307692
X	71564997	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.384615
X	71565320	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.2
X	71565344	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.166667
X	71565411	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.4
X	71565426	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.181818
X	71565491	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.384615
X	71565497	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.625
X	71565810	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.235294
X	71567016	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.411765
X	71567046	A->G	+	ENSG00000147162	OGT	protein_coding	Intergenic	.	.	Alu	0.125
X	73951375	A->G	+	ENSG00000225470	JPX	lincRNA	Intergenic	.	.	Alu	0.153846
X	74573582	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
X	74574946	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	74574947	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	74575029	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
X	74580719	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
X	74580734	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
X	74580738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
X	74580792	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
X	74580907	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
X	74580960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.210526
X	77852684	A->G	-	ENSG00000102158	MAGT1	protein_coding	Intergenic	.	.	Alu	0.2
X	77901921	A->G	+	ENSG00000131174	COX7B	protein_coding	Intergenic	.	.	Alu	0.2
X	78115982	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.35
X	78122133	A->G	+	ENSG00000102144	PGK1	protein_coding	Intergenic	.	.	Alu	0.0555556
4	378409	A->G	+	ENSG00000131127	ZNF141	protein_coding	Intergenic	.	.	Alu	0.2
4	465211	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.153846
4	465262	A->G	-	ENSG00000251595	ABCA11P	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.133333
4	777564	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.3125
4	777565	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.125
4	777693	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.2
4	777743	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.153846
4	778692	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.125
4	778739	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.133333
4	778780	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.173913
4	779169	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.166667
4	779216	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.105263
4	779509	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.25
4	779544	A->G	-	ENSG00000249592	AC139887.2	antisense	Intergenic	.	.	Alu	0.133333
10	916547	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.111111
10	916571	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.190476
10	916612	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.6
10	916795	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.7
10	916865	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.181818
10	928764	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.166667
10	929432	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.421053
10	929473	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.173913
10	929509	A->G	-	ENSG00000107929	LARP4B	protein_coding	Intergenic	.	.	Alu	0.133333
10	990005	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.117647
10	999212	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.363636
10	999794	A->G	+	ENSG00000107937	GTPBP4	protein_coding	Intergenic	.	.	Alu	0.181818
11	508197	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
11	508350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.75
11	508352	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
11	508371	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
11	508411	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
11	508511	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
11	508528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
11	508602	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
11	508607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
11	508608	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
11	508609	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
11	508611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
11	508646	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
11	508673	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178571
11	508678	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
11	508696	A->G	+	.	.	.	Intergenic	.	.	Alu	0.138889
11	508699	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
11	508717	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
11	508722	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
11	508815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
11	508843	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
11	508858	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
11	510416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
11	510431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
11	510483	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
11	514011	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
11	582334	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.545455
11	582365	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.142857
11	583443	A->G	+	ENSG00000070047	PHRF1	protein_coding	Intergenic	.	.	Alu	0.214286
12	378428	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.133333
12	380146	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.1
12	380647	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.2
12	381899	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.153846
12	381918	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.230769
12	383317	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.272727
12	383339	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.5
12	383353	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.153846
12	383420	A->G	-	ENSG00000073614	KDM5A	protein_coding	Intergenic	.	.	Alu	0.142857
16	216670	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.133333
16	217504	A->G	-	ENSG00000007392	LUC7L	protein_coding	Intergenic	.	.	Alu	0.2
18	231208	A->G	-	ENSG00000079134	THOC1	protein_coding	Intergenic	.	.	Alu	0.153846
18	242395	A->G	-	ENSG00000079134	THOC1	protein_coding	Intergenic	.	.	Alu	0.153846
18	242409	A->G	-	ENSG00000079134	THOC1	protein_coding	Intergenic	.	.	Alu	0.2
18	711070	A->G	-	ENSG00000132199	ENOSF1	protein_coding	Intergenic	.	.	Alu	0.2
19	809527	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.2
19	809593	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.1875
19	810187	A->G	+	ENSG00000011304	PTBP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1221498	A->G	-	ENSG00000078808	SDF4	protein_coding	Intergenic	.	.	Alu	0.565217
1	1221502	A->G	-	ENSG00000078808	SDF4	protein_coding	Intergenic	.	.	Alu	0.44
1	1222080	A->G	-	ENSG00000078808	SDF4	protein_coding	Intergenic	.	.	Alu	0.357143
1	1397392	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.272727
1	1397627	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.181818
1	1397753	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.181818
1	1397789	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.153846
1	1397855	A->G	-	ENSG00000221978	CCNL2	protein_coding	Intergenic	.	.	Alu	0.153846
1	1402786	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.2
1	1403304	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.25
1	1403319	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.285714
1	1403382	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.117647
1	1403471	A->G	-	ENSG00000242485	MRPL20	protein_coding	Intergenic	.	.	Alu	0.153846
1	1483237	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intergenic	.	.	Alu	0.230769
1	1483377	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intergenic	.	.	Alu	0.181818
1	1573045	A->G	-	ENSG00000160075	SSU72	protein_coding	Intergenic	.	.	Alu	0.133333
1	1573166	A->G	-	ENSG00000160075	SSU72	protein_coding	Intergenic	.	.	Alu	0.142857
1	1573546	A->G	-	ENSG00000160075	SSU72	protein_coding	Intergenic	.	.	Alu	0.0869565
1	1646520	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.272727
1	1647255	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.485714
1	1647280	A->G	-	ENSG00000248333	CDK11B	protein_coding	Intergenic	.	.	Alu	0.382353
1	1805237	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1821917	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.1875
1	1868524	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1870269	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.307692
1	1875246	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.2
1	1875320	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1875330	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.272727
1	1877610	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1877611	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.153846
1	1879992	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.375
1	1881512	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.315789
1	1882192	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.142857
1	1887792	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	1887814	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.545455
1	1888645	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.136364
1	1888690	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.133333
1	1888716	A->G	-	ENSG00000078369	GNB1	protein_coding	Intergenic	.	.	Alu	0.181818
1	2244030	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.0909091
1	2244070	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.321429
1	2244095	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.296296
1	2244105	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.166667
1	2244150	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.428571
1	2244413	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.0833333
1	2244427	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.192308
1	2244429	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.0740741
1	2244459	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.387097
1	2244469	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.12
1	2244476	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.0740741
1	2244494	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.541667
1	2244521	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.15
1	2244525	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.105263
1	2264369	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.181818
1	2264386	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.181818
1	2264531	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.133333
1	2265853	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.166667
1	2286057	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.105263
1	2286348	A->G	+	ENSG00000157933	SKI	protein_coding	Intergenic	.	.	Alu	0.133333
1	3786017	A->G	-	ENSG00000130764	LRRC47	protein_coding	Intergenic	.	.	Alu	0.214286
1	3786129	A->G	-	ENSG00000130764	LRRC47	protein_coding	Intergenic	.	.	Alu	0.538462
1	3786142	A->G	-	ENSG00000130764	LRRC47	protein_coding	Intergenic	.	.	Alu	0.25
1	3786143	A->G	-	ENSG00000130764	LRRC47	protein_coding	Intergenic	.	.	Alu	0.25
1	6188307	A->G	-	ENSG00000116251	RPL22	protein_coding	Intergenic	.	.	Alu	0.4
1	8876910	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	8876911	A->G	-	ENSG00000074800	ENO1	protein_coding	Intergenic	.	.	Alu	0.0555556
1	8907755	A->G	-	.	.	.	Intergenic	.	.	Alu	1
1	8963610	A->G	-	ENSG00000131686	CA6	protein_coding	Intergenic	.	.	Alu	0.181818
1	8967096	A->G	-	ENSG00000131686	CA6	protein_coding	Intergenic	.	.	Alu	0.2
1	8970633	A->G	-	ENSG00000131686	CA6	protein_coding	Intergenic	.	.	Alu	0.25
1	8970647	A->G	-	ENSG00000131686	CA6	protein_coding	Intergenic	.	.	Alu	0.142857
1	8970704	A->G	-	ENSG00000131686	CA6	protein_coding	Intergenic	.	.	Alu	0.105263
1	8970774	A->G	-	ENSG00000131686	CA6	protein_coding	Intergenic	.	.	Alu	0.285714
1	9711330	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.230769
1	9711605	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.3
1	9712855	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.153846
1	9713239	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.166667
1	9713262	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.166667
1	9714087	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.263158
1	9714099	A->G	+	ENSG00000171608	PIK3CD	protein_coding	Intergenic	.	.	Alu	0.111111
1	9927455	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.133333
1	9927475	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.153846
1	9928694	A->G	-	ENSG00000162441	LZIC	protein_coding	Intergenic	.	.	Alu	0.111111
2	6837616	A->G	-	ENSG00000225964	NRIR	antisense	Intergenic	.	.	Alu	0.307692
2	6838125	A->G	-	ENSG00000225964	NRIR	antisense	Intergenic	.	.	Alu	0.7
2	9495950	A->G	-	ENSG00000134330	IAH1	protein_coding	Intergenic	.	.	Alu	0.166667
2	9524259	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.176471
2	9524290	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.75
2	9524291	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.823529
2	9533077	A->G	-	ENSG00000151694	ADAM17	protein_coding	Intergenic	.	.	Alu	0.2
2	9624789	A->G	-	ENSG00000134308	YWHAQ	protein_coding	Intergenic	.	.	Alu	0.166667
2	9855445	A->G	+	ENSG00000115750	TAF1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	9855497	A->G	+	ENSG00000115750	TAF1B	protein_coding	Intergenic	.	.	Alu	0.363636
2	9935792	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
2	9935870	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	9383702	A->G	-	ENSG00000206573	THUMPD3-AS1	antisense	Intergenic	.	.	Alu	0.125
3	9383709	A->G	-	ENSG00000206573	THUMPD3-AS1	antisense	Intergenic	.	.	Alu	0.133333
3	9651746	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.294118
3	9651783	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9652185	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.230769
3	9652538	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.111111
3	9652652	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9652654	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9653156	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.117647
3	9653187	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.0952381
3	9653217	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.117647
3	9655106	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.333333
3	9656445	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.2
3	9656601	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.111111
3	9656604	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.111111
3	9656634	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.1875
3	9659114	A->G	+	ENSG00000163719	MTMR14	protein_coding	Intergenic	.	.	Alu	0.285714
3	9799496	A->G	+	ENSG00000241553	ARPC4	protein_coding	Intergenic	.	.	Alu	0.08
4	1731661	A->G	+	ENSG00000013810	TACC3	protein_coding	Intergenic	.	.	Alu	0.0952381
4	1731687	A->G	+	ENSG00000013810	TACC3	protein_coding	Intergenic	.	.	Alu	0.105263
4	2473766	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.25
4	2491336	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2491337	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.4
4	2497841	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.4
4	2499528	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.2
4	2503137	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.142857
4	2503140	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.125
4	2503143	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.352941
4	2503149	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0952381
4	2503988	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.0952381
4	2504977	A->G	+	ENSG00000063978	RNF4	protein_coding	Intergenic	.	.	Alu	0.111111
4	7065390	A->G	-	ENSG00000109519	GRPEL1	protein_coding	Intergenic	.	.	Alu	0.153846
4	7065402	A->G	-	ENSG00000109519	GRPEL1	protein_coding	Intergenic	.	.	Alu	0.181818
5	6610517	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.8
5	6610523	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.2
5	6630443	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.0869565
5	6630470	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.125
5	6631047	A->G	-	ENSG00000037474	NSUN2	protein_coding	Intergenic	.	.	Alu	0.153846
6	2836849	A->G	-	ENSG00000021355	SERPINB1	protein_coding	Intergenic	.	.	Alu	0.133333
6	3069757	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.6
6	3069973	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.2
6	3070635	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.3
6	3078292	A->G	+	ENSG00000137275	RIPK1	protein_coding	Intergenic	.	.	Alu	0.133333
7	1153382	A->G	-	ENSG00000178381	ZFAND2A	protein_coding	Intergenic	.	.	Alu	0.454545
7	1155117	A->G	-	ENSG00000178381	ZFAND2A	protein_coding	Intergenic	.	.	Alu	0.117647
7	1534921	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.0740741
7	1534928	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.16
7	1534999	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.125
7	1535006	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.0869565
7	1535009	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.47619
7	1535186	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.151515
7	1535193	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.0512821
7	1535393	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.652174
7	1535464	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.516129
7	1535469	A->G	+	ENSG00000198517	MAFK	protein_coding	Intergenic	.	.	Alu	0.129032
7	2369876	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.2
7	2369877	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.2
7	2369878	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.2
7	2370362	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.153846
7	2370366	A->G	+	ENSG00000106263	EIF3B	protein_coding	Intergenic	.	.	Alu	0.2
7	2532027	A->G	+	.	.	.	Intergenic	.	.	Alu	0.369231
7	2535667	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16
7	2535677	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
7	2535904	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
7	2535914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
7	2535969	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
7	2535979	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
7	2536020	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
7	2536043	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
7	2536047	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
7	2536100	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
7	2536882	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
7	2537347	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0571429
7	2537381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.172414
7	2537385	A->G	+	.	.	.	Intergenic	.	.	Alu	0.37037
7	2544601	A->G	+	ENSG00000106009	BRAT1	protein_coding	Intergenic	.	.	Alu	0.2
7	2545590	A->G	+	ENSG00000106009	BRAT1	protein_coding	Intergenic	.	.	Alu	0.230769
7	2545594	A->G	+	ENSG00000106009	BRAT1	protein_coding	Intergenic	.	.	Alu	0.285714
7	2545607	A->G	+	ENSG00000106009	BRAT1	protein_coding	Intergenic	.	.	Alu	0.142857
7	2546192	A->G	+	ENSG00000106009	BRAT1	protein_coding	Intergenic	.	.	Alu	0.2
7	2676572	A->G	-	.	.	.	Intergenic	.	.	Alu	1
7	2839596	A->G	-	ENSG00000146535	GNA12	protein_coding	Intergenic	.	.	Alu	0.4
7	2942588	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.133333
7	2942598	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.111111
7	2942714	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.117647
7	2942736	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.333333
7	2942737	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.333333
7	2942743	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.230769
7	2943299	A->G	-	ENSG00000198286	CARD11	protein_coding	Intergenic	.	.	Alu	0.3
7	4778037	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.230769
7	4778190	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.272727
7	4780619	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.181818
7	4786810	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.25
7	4786834	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.0606061
7	4786835	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.28125
7	4786840	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.515152
7	4786871	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.0571429
7	4786875	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.114286
7	4786910	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.2
7	4787365	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.416667
7	4787435	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.347826
7	4787443	A->G	+	ENSG00000242802	AP5Z1	protein_coding	Intergenic	.	.	Alu	0.217391
7	5710125	A->G	-	ENSG00000011275	RNF216	protein_coding	Intergenic	.	.	Alu	0.2
7	5824787	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
7	5826058	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	5826136	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
7	5827061	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	5827573	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	5827703	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	5828392	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	5828465	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	5830413	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
7	5830417	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	5832869	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	5834253	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	5834276	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	5842160	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
7	5842163	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.176471
7	5845262	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	5845362	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
7	5848107	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	5848117	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
7	5848126	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
7	5848162	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.12
7	5848187	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.206897
7	5848305	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	5848323	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.36
7	5848351	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.08
7	5848361	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0833333
7	5848391	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
7	5848404	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	5848413	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.210526
7	5848416	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.473684
7	5848426	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	5848439	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	5848452	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	5848453	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	5848468	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	5848471	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
7	5848488	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.388889
7	5848510	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0689655
7	5848533	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.205882
7	5848538	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.542857
7	5848547	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.189189
7	5848548	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.162162
7	5848560	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0571429
7	5849273	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3125
7	5849330	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	5849496	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
7	5849639	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.294118
7	5849641	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
7	5852112	A->G	+	ENSG00000235944	ZNF815P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
7	5854550	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	5854754	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
7	5857929	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	6104031	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
7	6382648	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.142857
7	6382677	A->G	+	ENSG00000136238	RAC1	protein_coding	Intergenic	.	.	Alu	0.117647
7	6604137	A->G	+	ENSG00000146576	C7orf26	protein_coding	Intergenic	.	.	Alu	0.181818
7	6604203	A->G	+	ENSG00000146576	C7orf26	protein_coding	Intergenic	.	.	Alu	0.142857
8	1774888	A->G	+	ENSG00000182372	CLN8	protein_coding	Intergenic	.	.	Alu	0.0909091
8	8922461	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
10	1046858	A->G	-	ENSG00000067064	IDI1	protein_coding	Intergenic	.	.	Alu	0.727273
10	6206927	A->G	+	ENSG00000170525	PFKFB3	protein_coding	Intergenic	.	.	Alu	0.285714
10	6440771	A->G	-	ENSG00000065675	PRKCQ	protein_coding	Intergenic	.	.	Alu	0.2
11	2981824	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.166667
11	2986314	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.117647
11	2986327	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.133333
11	2987377	A->G	-	ENSG00000205531	NAP1L4	protein_coding	Intergenic	.	.	Alu	0.2
11	3698373	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.15
11	3698430	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.333333
11	3698431	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.409091
11	3698484	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.157895
11	3698821	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.727273
11	3698822	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.636364
11	3703313	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3704926	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3704949	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.416667
11	3705008	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.454545
11	3721574	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.125
11	3722704	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.55
11	3722716	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.136364
11	3722731	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.238095
11	3722805	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.266667
11	3736148	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.133333
11	3740254	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.333333
11	3740266	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.2
11	3759982	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.384615
11	3767435	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3770418	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.117647
11	3791282	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.333333
11	3791307	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.266667
11	3791350	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.3
11	3791385	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3791402	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.111111
11	3791412	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.166667
11	3791422	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.142857
11	3791426	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.214286
11	3792363	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.105263
11	3792609	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0769231
11	3793028	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.111111
11	3793029	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.125
11	3793059	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.125
11	3793084	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.117647
11	3793375	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.153846
11	3794739	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.105263
11	3794752	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.111111
11	3794864	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.1875
11	3795334	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.176471
11	3795399	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.0952381
11	3795415	A->G	-	ENSG00000110713	NUP98	protein_coding	Intergenic	.	.	Alu	0.111111
11	3830392	A->G	-	ENSG00000177105	RHOG	protein_coding	Intergenic	.	.	Alu	0.125
11	4096125	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.1
11	4096126	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.241379
11	4096143	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.1875
11	4097138	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.15
11	4103740	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.272727
11	4105334	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.214286
11	4112840	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.2
11	4120464	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.0952381
11	4120537	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.25
11	4120640	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.117647
11	4120869	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.0909091
11	4120872	A->G	+	ENSG00000167325	RRM1	protein_coding	Intergenic	.	.	Alu	0.15
11	5700254	A->G	+	ENSG00000132274	TRIM22	protein_coding	Intergenic	.	.	Alu	0.0909091
11	5700304	A->G	+	ENSG00000132274	TRIM22	protein_coding	Intergenic	.	.	Alu	0.166667
11	6408404	A->G	-	ENSG00000166313	APBB1	protein_coding	Intergenic	.	.	Alu	0.230769
11	6408410	A->G	-	ENSG00000166313	APBB1	protein_coding	Intergenic	.	.	Alu	0.166667
11	6408411	A->G	-	ENSG00000166313	APBB1	protein_coding	Intergenic	.	.	Alu	0.166667
11	6408889	A->G	-	ENSG00000166313	APBB1	protein_coding	Intergenic	.	.	Alu	0.2
11	6711074	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0816327
11	6711092	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
11	6711170	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0638298
11	6711171	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0425532
11	6711239	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
11	6711240	A->G	-	.	.	.	Intergenic	.	.	Alu	0.116279
11	6713220	A->G	-	.	.	.	Intergenic	.	.	Alu	0.421053
11	6713249	A->G	-	.	.	.	Intergenic	.	.	Alu	0.666667
11	6713256	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
11	6713272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
11	6713323	A->G	-	.	.	.	Intergenic	.	.	Alu	0.769231
11	6713328	A->G	-	.	.	.	Intergenic	.	.	Alu	0.357143
11	6713329	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
11	6713330	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
11	6713377	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
11	6713406	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
11	6713407	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
11	8952535	A->G	-	ENSG00000175348	TMEM9B	protein_coding	Intergenic	.	.	Alu	0.25
11	9260884	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.166667
11	9261017	A->G	-	ENSG00000184014	DENND5A	protein_coding	Intergenic	.	.	Alu	0.181818
11	9290315	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.181818
11	9290924	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.142857
11	9290948	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.153846
11	9290959	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.133333
11	9290967	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.142857
11	9291056	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.444444
11	9291097	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.166667
11	9291158	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.285714
11	9291164	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.133333
11	9291203	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.111111
11	9291258	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.333333
11	9291756	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.111111
11	9291872	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.272727
11	9292590	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.857143
11	9292595	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.25
11	9292607	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.75
11	9293200	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.153846
11	9293205	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.5
11	9293210	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.230769
11	9293241	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.153846
11	9293970	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.4
11	9294329	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.153846
11	9294412	A->G	-	ENSG00000166471	TMEM41B	protein_coding	Intergenic	.	.	Alu	0.285714
11	9415133	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.166667
11	9415135	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.416667
11	9415277	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.3
11	9431957	A->G	+	ENSG00000254397	AC132192.1	antisense	Intergenic	.	.	Alu	0.153846
11	9442900	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.3
11	9442912	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.3
11	9442916	A->G	+	ENSG00000205339	IPO7	protein_coding	Intergenic	.	.	Alu	0.2
11	9835374	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.2
11	9835408	A->G	-	ENSG00000133812	SBF2	protein_coding	Intergenic	.	.	Alu	0.2
12	3612800	A->G	-	ENSG00000130038	CRACR2A	protein_coding	Intergenic	.	.	Alu	0.181818
12	6577237	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.272727
12	6586480	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.166667
12	6586533	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.363636
12	6586651	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.2
12	6586664	A->G	-	ENSG00000285238	AC006064.6	protein_coding	Intergenic	.	.	Alu	0.545455
12	7923301	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.139535
12	7923451	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0862069
12	7923532	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0638298
12	7923533	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0434783
12	7923592	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.08
12	7923877	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0333333
12	7926638	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0266667
12	7928022	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0273973
12	7928023	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0277778
12	7928766	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.553571
12	7928953	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.0555556
12	7929353	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.529412
12	7932018	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intergenic	.	.	Alu	0.12
12	8942630	A->G	-	ENSG00000003056	M6PR	protein_coding	Intergenic	.	.	Alu	0.545455
12	9649312	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intergenic	.	.	Alu	1
12	9651585	A->G	+	ENSG00000272917	AC010186.4	processed_transcript	Intergenic	.	.	Alu	1
12	9658632	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.225806
12	9658633	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.0666667
12	9658649	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.214286
12	9658712	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.444444
12	9658727	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.294118
12	9658740	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.230769
12	9658744	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.153846
12	9658748	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.153846
12	9658807	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.454545
12	9658812	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.4
12	9658872	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	1
12	9659352	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	1
12	9659428	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.285714
12	9659436	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.133333
12	9659474	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.35
12	9659492	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.318182
12	9659497	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.0909091
12	9659523	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.444444
12	9659563	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.105263
12	9659572	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.315789
12	9659578	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.611111
12	9659581	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intergenic	.	.	Alu	0.444444
12	9662186	A->G	+	.	.	.	Intergenic	.	.	Alu	1
12	9663271	A->G	+	.	.	.	Intergenic	.	.	Alu	1
12	9670356	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	1
12	9673650	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.583333
12	9678013	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	1
12	9680384	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	1
12	9688484	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.3125
12	9688498	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.117647
12	9688517	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.157895
12	9688590	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.4
12	9688598	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.25
12	9688621	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.25
12	9688665	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.230769
12	9691137	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	1
12	9692213	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.0909091
12	9692283	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.181818
12	9692349	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.3
12	9692374	A->G	+	ENSG00000069493	CLEC2D	protein_coding	Intergenic	.	.	Alu	0.153846
12	9700995	A->G	+	.	.	.	Intergenic	.	.	Alu	1
12	9757683	A->G	-	ENSG00000110848	CD69	protein_coding	Intergenic	.	.	Alu	0.985915
12	9857800	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.333333
12	9857816	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.384615
12	9857937	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.6
12	9857938	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.45
12	9857970	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.25
12	9858949	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.25
12	9858964	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.333333
12	9858969	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.277778
12	9858989	A->G	-	ENSG00000110852	CLEC2B	protein_coding	Intergenic	.	.	Alu	0.210526
16	1360057	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intergenic	.	.	Alu	0.2
16	1360058	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intergenic	.	.	Alu	0.3
16	2260941	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.3
16	2260972	A->G	-	ENSG00000205937	RNPS1	protein_coding	Intergenic	.	.	Alu	0.2
16	3238717	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
16	3238752	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
16	3240874	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
16	3241594	A->G	-	.	.	.	Intergenic	.	.	Alu	0.270833
16	3241603	A->G	-	.	.	.	Intergenic	.	.	Alu	0.288889
16	3241614	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0851064
16	3241638	A->G	-	.	.	.	Intergenic	.	.	Alu	0.291667
16	3241687	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0576923
16	3241688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0566038
16	3241704	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
16	3241705	A->G	-	.	.	.	Intergenic	.	.	Alu	0.119048
16	3241736	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0408163
16	3241741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0416667
16	3241759	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
16	3241760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.108108
16	3241781	A->G	-	.	.	.	Intergenic	.	.	Alu	0.16
16	3241782	A->G	-	.	.	.	Intergenic	.	.	Alu	0.326531
16	3241788	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
16	3241794	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0392157
16	3241800	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0754717
16	3574115	A->G	-	ENSG00000167984	NLRC3	protein_coding	Intergenic	.	.	Alu	0.166667
16	3574119	A->G	-	ENSG00000167984	NLRC3	protein_coding	Intergenic	.	.	Alu	0.166667
16	4397251	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.153846
16	4398916	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.181818
16	4400264	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.133333
16	4413605	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.135135
16	4413606	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.0833333
16	4413708	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.8
16	4413709	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.3
16	4414108	A->G	-	ENSG00000103426	CORO7-PAM16	protein_coding	Intergenic	.	.	Alu	0.12
16	4843292	A->G	-	ENSG00000140632	GLYR1	protein_coding	Intergenic	.	.	Alu	0.285714
17	1360644	A->G	-	ENSG00000108953	YWHAE	protein_coding	Intergenic	.	.	Alu	0.3
17	1427698	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.153846
17	1433973	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.181818
17	1435294	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.3
17	1435802	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.0909091
17	1441151	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.2
17	1444109	A->G	-	ENSG00000167193	CRK	protein_coding	Intergenic	.	.	Alu	0.133333
17	1515003	A->G	-	ENSG00000132376	INPP5K	protein_coding	Intergenic	.	.	Alu	0.230769
17	1528069	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.2
17	1528278	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.5
17	1528279	A->G	-	ENSG00000174238	PITPNA	protein_coding	Intergenic	.	.	Alu	0.3
17	1578800	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.666667
17	1578801	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.25
17	1578884	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.363636
17	1578896	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.181818
17	1578972	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.142857
17	1579071	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.272727
17	1579682	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.5
17	1580019	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.214286
17	1580055	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.3
17	1585101	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.346154
17	1588154	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.142857
17	1588238	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.285714
17	1588264	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.166667
17	1588575	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.181818
17	1588637	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.214286
17	1589733	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.333333
17	1589757	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.235294
17	1589914	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.133333
17	1611400	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.111111
17	1611478	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.214286
17	1611486	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.357143
17	1611487	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.428571
17	1613710	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intergenic	.	.	Alu	0.125
17	1630640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	1630748	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	1630761	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
17	1630762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	1631106	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	1631112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	1631115	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	1631246	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	1631247	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
17	1632562	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	1632563	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
17	1632631	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
17	2045701	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
17	2045729	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
17	2045774	A->G	-	.	.	.	Intergenic	.	.	Alu	0.09375
17	2045780	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
17	2045823	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
17	2045862	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
17	2046452	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
17	2046477	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
17	2046513	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0857143
17	2046549	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	2046554	A->G	-	.	.	.	Intergenic	.	.	Alu	0.411765
17	2046555	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
17	2046581	A->G	-	.	.	.	Intergenic	.	.	Alu	0.434783
17	2046584	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
17	2046585	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	2046599	A->G	-	.	.	.	Intergenic	.	.	Alu	0.212121
17	2046689	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
17	2046696	A->G	-	.	.	.	Intergenic	.	.	Alu	0.347826
17	2046811	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
17	2046817	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0512821
17	2046882	A->G	-	.	.	.	Intergenic	.	.	Alu	0.193548
17	2046894	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	2046979	A->G	-	.	.	.	Intergenic	.	.	Alu	0.148148
17	2047039	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
17	2047069	A->G	-	.	.	.	Intergenic	.	.	Alu	0.275862
17	2047135	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
17	2047141	A->G	-	.	.	.	Intergenic	.	.	Alu	0.137931
17	2047145	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
17	2047171	A->G	-	.	.	.	Intergenic	.	.	Alu	0.148148
17	2047174	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
17	2047175	A->G	-	.	.	.	Intergenic	.	.	Alu	0.172414
17	2047181	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
17	2047216	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
17	2047524	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0606061
17	2047683	A->G	-	.	.	.	Intergenic	.	.	Alu	0.108108
17	2047705	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0930233
17	2047949	A->G	-	.	.	.	Intergenic	.	.	Alu	0.189655
17	2047986	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0333333
17	2597594	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.153846
17	2600049	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2600109	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.307692
17	2604533	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2655587	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2663068	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.181818
17	2671683	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.214286
17	2672006	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.142857
17	2672010	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.285714
17	2672039	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.25
17	2672107	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.166667
17	2672108	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.153846
17	2672223	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.8
17	2672263	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.2
17	2674884	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.111111
17	2674898	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.0909091
17	2675168	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.117647
17	2675189	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.315789
17	2675255	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.363636
17	2675265	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.0857143
17	2675277	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.09375
17	2675538	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.464286
17	2675564	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.0606061
17	2675568	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.361111
17	2675569	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.138889
17	2675573	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.0555556
17	2675609	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.236842
17	2675698	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.0882353
17	2675720	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.296296
17	2676118	A->G	+	ENSG00000007168	PAFAH1B1	protein_coding	Intergenic	.	.	Alu	0.0714286
17	3899341	A->G	-	ENSG00000108405	P2RX1	protein_coding	Intergenic	.	.	Alu	0.636364
17	3932206	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.4
17	3932220	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.2
17	3932663	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.133333
17	3948705	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.214286
17	3949045	A->G	-	ENSG00000074370	ATP2A3	protein_coding	Intergenic	.	.	Alu	0.3
17	4713551	A->G	+	ENSG00000141480	ARRB2	protein_coding	Intergenic	.	.	Alu	0.0882353
17	5295198	A->G	+	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.2
17	5358613	A->G	+	ENSG00000029725	RABEP1	protein_coding	Intergenic	.	.	Alu	0.266667
17	5423444	A->G	+	ENSG00000129197	RPAIN	protein_coding	Intergenic	.	.	Alu	0.416667
17	5487377	A->G	+	ENSG00000167842	MIS12	protein_coding	Intergenic	.	.	Alu	0.357143
17	7489879	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.166667
17	7490282	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.153846
17	7492447	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.117647
17	7492448	A->G	+	ENSG00000181222	POLR2A	protein_coding	Intergenic	.	.	Alu	0.294118
17	8470523	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.285714
17	8471207	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.105263
17	8471225	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.117647
17	8472392	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.470588
17	8472460	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.166667
17	8472464	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.166667
17	8472544	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.133333
17	8472545	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.5
17	8472568	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.1875
17	8472608	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.142857
17	8472615	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.133333
17	8472623	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.133333
17	8473251	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.1
17	8473261	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.172414
17	8473304	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.2
17	8473326	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.153846
17	8473396	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.230769
17	8473422	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.08
17	8473423	A->G	+	ENSG00000166579	NDEL1	protein_coding	Intergenic	.	.	Alu	0.12
17	8876361	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
17	8876392	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	8906626	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.153846
17	8906759	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.25
17	8906761	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.3
17	8907857	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.272727
17	8943370	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.272727
17	8949636	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.263158
17	8950584	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.210526
17	8963115	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0909091
17	8963118	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0833333
17	8963658	A->G	-	ENSG00000141506	PIK3R5	protein_coding	Intergenic	.	.	Alu	0.0952381
18	2660683	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.181818
18	2708470	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.357143
18	2708515	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.307692
18	2708638	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.363636
18	2708696	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.692308
18	2708716	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.272727
18	2708719	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.454545
18	2708720	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.454545
18	2708745	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2717371	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2717406	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.142857
18	2717440	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.117647
18	2722236	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.454545
18	2722273	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2754872	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2767055	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.3
18	2767689	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2772693	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.111111
18	2772730	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.272727
18	2772731	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.173913
18	2773878	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.125
18	2786233	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.727273
18	2786252	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.3
18	2786459	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.153846
18	2786541	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.25
18	2786542	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.333333
18	2786545	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.266667
18	2786607	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.2
18	2789721	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.272727
18	2796629	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.142857
18	2796720	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.125
18	2797796	A->G	+	ENSG00000101596	SMCHD1	protein_coding	Intergenic	.	.	Alu	0.111111
18	2892941	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.3
18	2896707	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.117647
18	2896863	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.142857
18	2896865	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.266667
18	2896928	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.263158
18	2897665	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.153846
18	2900265	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0952381
18	2900330	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.0645161
18	2905683	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.142857
18	2905703	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.142857
18	2905744	A->G	+	ENSG00000132205	EMILIN2	protein_coding	Intergenic	.	.	Alu	0.181818
18	3598633	A->G	+	ENSG00000170579	DLGAP1	protein_coding	Intergenic	.	.	Alu	0.181818
18	5294443	A->G	-	ENSG00000198081	ZBTB14	protein_coding	Intergenic	.	.	Alu	0.347826
18	9111397	A->G	+	ENSG00000178127	NDUFV2	protein_coding	Intergenic	.	.	Alu	0.25
18	9143600	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9143642	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.142857
18	9143672	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.166667
18	9198624	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.25
18	9198630	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.333333
18	9198667	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.227273
18	9198689	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.2
18	9198730	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.1
18	9198798	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.333333
18	9199054	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.176471
18	9199059	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.705882
18	9199060	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.352941
18	9199064	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.466667
18	9199067	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.133333
18	9199131	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.117647
18	9199135	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.176471
18	9199136	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.235294
18	9199173	A->G	+	ENSG00000265257	AP005263.1	processed_transcript	Intergenic	.	.	Alu	0.125
19	1029960	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.176471
19	1029961	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.294118
19	1033425	A->G	+	ENSG00000064666	CNN2	protein_coding	Intergenic	.	.	Alu	0.142857
19	1078404	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.2
19	1078405	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.3
19	1078469	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.294118
19	1078512	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0454545
19	1078526	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.442857
19	1078534	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0273973
19	1078570	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.031746
19	1078575	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.03125
19	1078585	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0298507
19	1078591	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.114754
19	1078594	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0576923
19	1078600	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.25
19	1078620	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0363636
19	1078656	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.318182
19	1078670	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.136364
19	1078671	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0952381
19	1079239	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.37931
19	1079245	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0625
19	1079246	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.117647
19	1079291	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.04
19	1079302	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.104167
19	1079358	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0769231
19	1079382	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.103448
19	1079389	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.0869565
19	1079461	A->G	+	ENSG00000180448	ARHGAP45	protein_coding	Intergenic	.	.	Alu	0.130435
19	1256340	A->G	+	ENSG00000167470	MIDN	protein_coding	Intergenic	.	.	Alu	0.0833333
19	1414270	A->G	+	ENSG00000071626	DAZAP1	protein_coding	Intergenic	.	.	Alu	0.391304
19	1414279	A->G	+	ENSG00000071626	DAZAP1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	1414483	A->G	+	ENSG00000071626	DAZAP1	protein_coding	Intergenic	.	.	Alu	0.117647
19	1825385	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.117647
19	1825422	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.3125
19	1825423	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.125
19	1825591	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.357143
19	1825613	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	1825614	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	1825726	A->G	-	ENSG00000079313	REXO1	protein_coding	Intergenic	.	.	Alu	0.291667
19	1976796	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.6875
19	1976817	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.266667
19	1976820	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.333333
19	1976906	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.3
19	1976919	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.166667
19	1976973	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.4375
19	1976978	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.166667
19	1977528	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.714286
19	1977543	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.307692
19	1977577	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.230769
19	1977603	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.176471
19	1977632	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.133333
19	1977638	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.111111
19	1977673	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.148148
19	1977694	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.15625
19	1977699	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.151515
19	1977716	A->G	+	ENSG00000133275	CSNK1G2	protein_coding	Intergenic	.	.	Alu	0.678571
19	1989294	A->G	+	ENSG00000133243	BTBD2	protein_coding	Intergenic	.	.	Alu	0.272727
19	2070721	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	2074154	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.210526
19	2074170	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0833333
19	2075468	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.3
19	2077142	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.147059
19	2077144	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.111111
19	2077209	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0540541
19	2077234	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0666667
19	2077251	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.137931
19	2077274	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.111111
19	2077302	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0869565
19	2077319	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.125
19	2077339	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0689655
19	2077340	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0666667
19	2077345	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.114286
19	2077388	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.212121
19	2077857	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.416667
19	2077876	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.142857
19	2077900	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.6
19	2077948	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0769231
19	2077951	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0740741
19	2077952	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.25
19	2077960	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0666667
19	2077961	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0666667
19	2077984	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.2
19	2078063	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.347826
19	2078073	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0714286
19	2078919	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.111111
19	2078923	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.117647
19	2081801	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.142857
19	2081848	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0833333
19	2084018	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.117647
19	2084236	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.12
19	2084248	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0869565
19	2084263	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.0952381
19	2084267	A->G	-	ENSG00000172081	MOB3A	protein_coding	Intergenic	.	.	Alu	0.1
19	2134326	A->G	-	ENSG00000065000	AP3D1	protein_coding	Intergenic	.	.	Alu	0.181818
19	2135522	A->G	-	ENSG00000065000	AP3D1	protein_coding	Intergenic	.	.	Alu	0.272727
19	2238290	A->G	+	ENSG00000104897	SF3A2	protein_coding	Intergenic	.	.	Alu	0.2
19	2284049	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.5
19	2292029	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0833333
19	2292673	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2292690	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.105263
19	2293249	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.205882
19	2293271	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.548387
19	2293325	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.25
19	2293326	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.5
19	2293995	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.0612245
19	2298325	A->G	+	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2327354	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.153846
19	2327417	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.142857
19	2327421	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.153846
19	2327422	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.384615
19	2327462	A->G	-	ENSG00000273734	AC005258.1	protein_coding	Intergenic	.	.	Alu	0.2
19	2479887	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	3194304	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.2
19	3194311	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.2
19	3195053	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.916667
19	3195314	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.363636
19	3195324	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.727273
19	3195330	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.181818
19	3195336	A->G	+	ENSG00000125912	NCLN	protein_coding	Intergenic	.	.	Alu	0.166667
19	3540215	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.214286
19	3540239	A->G	-	ENSG00000183397	C19orf71	protein_coding	Intergenic	.	.	Alu	0.125
19	3550331	A->G	-	ENSG00000267436	AC005786.3	antisense	Intergenic	.	.	Alu	0.125
19	3552709	A->G	-	ENSG00000267436	AC005786.3	antisense	Intergenic	.	.	Alu	0.117647
19	3555177	A->G	-	ENSG00000267436	AC005786.3	antisense	Intergenic	.	.	Alu	0.142857
19	3555194	A->G	-	ENSG00000267436	AC005786.3	antisense	Intergenic	.	.	Alu	0.166667
19	3647557	A->G	-	ENSG00000186111	PIP5K1C	protein_coding	Intergenic	.	.	Alu	0.294118
19	3759153	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.352941
19	3759177	A->G	-	ENSG00000011132	APBA3	protein_coding	Intergenic	.	.	Alu	0.125
19	3780948	A->G	-	ENSG00000007264	MATK	protein_coding	Intergenic	.	.	Alu	0.181818
19	4049326	A->G	-	ENSG00000178951	ZBTB7A	protein_coding	Intergenic	.	.	Alu	0.272727
19	4050006	A->G	-	ENSG00000178951	ZBTB7A	protein_coding	Intergenic	.	.	Alu	0.136364
19	4050021	A->G	-	ENSG00000178951	ZBTB7A	protein_coding	Intergenic	.	.	Alu	0.173913
19	4913369	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.2
19	4913370	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.2
19	4913432	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.142857
19	4914012	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.153846
19	4914016	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.153846
19	4915512	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.193548
19	4915550	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	4915684	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0645161
19	4916075	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0571429
19	4916190	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.142857
19	4916272	A->G	-	ENSG00000276043	UHRF1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	5596019	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.8
19	5596083	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.625
19	5596093	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.117647
19	5596119	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.384615
19	5596139	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.1
19	5596141	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.111111
19	5596154	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.111111
19	5596180	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.214286
19	5596227	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.166667
19	5596391	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0967742
19	5596447	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0769231
19	5596469	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0714286
19	5596473	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.0740741
19	5596509	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.214286
19	5596518	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.176471
19	5596520	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.176471
19	5596526	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.277778
19	5596615	A->G	-	ENSG00000130254	SAFB2	protein_coding	Intergenic	.	.	Alu	0.148148
19	5709135	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.2
19	5709223	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.153846
19	5709418	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	5709666	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.153846
19	5709720	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.714286
19	5709742	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.25
19	5709745	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.333333
19	5709752	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.12
19	5709843	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.266667
19	5710151	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.25
19	5710156	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.357143
19	5710169	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.5
19	5710628	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	5710629	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.190476
19	5710644	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.125
19	5710791	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.2
19	5710821	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.153846
19	5710829	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.6
19	5710860	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.230769
19	5710914	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	5710933	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	5710957	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.185185
19	5710974	A->G	-	ENSG00000196365	LONP1	protein_coding	Intergenic	.	.	Alu	0.444444
19	5911177	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	5911227	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.333333
19	5911232	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.3
19	5911299	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.2
19	5911306	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.363636
19	5911318	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.384615
19	5911325	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.142857
19	5911351	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.5
19	5911355	A->G	+	ENSG00000267314	AC104532.1	protein_coding	Intergenic	.	.	Alu	0.133333
19	6665482	A->G	-	ENSG00000125735	TNFSF14	protein_coding	Intergenic	.	.	Alu	0.108108
19	6665523	A->G	-	ENSG00000125735	TNFSF14	protein_coding	Intergenic	.	.	Alu	0.15625
19	6830520	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.333333
19	6830533	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.166667
19	6830540	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.615385
19	6830543	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.25
19	6830579	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.454545
19	6830971	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.3
19	6830981	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.3
19	6831017	A->G	+	ENSG00000141968	VAV1	protein_coding	Intergenic	.	.	Alu	0.615385
19	7070835	A->G	+	ENSG00000130544	ZNF557	protein_coding	Intergenic	.	.	Alu	0.363636
19	8473072	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.153846
19	8473150	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.117647
19	8479564	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.166667
19	8479584	A->G	+	ENSG00000099783	HNRNPM	protein_coding	Intergenic	.	.	Alu	0.454545
19	8517920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
19	8517928	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
19	8517938	A->G	-	.	.	.	Intergenic	.	.	Alu	0.619048
19	8518021	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
19	8518033	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
19	8518036	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
19	8518047	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
19	8518052	A->G	-	.	.	.	Intergenic	.	.	Alu	0.172414
19	8518102	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
19	8518115	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
19	8519854	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
19	8520432	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	8532624	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.176471
19	8532630	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.105263
19	8532652	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.142857
19	8532694	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.105263
19	8532703	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.266667
19	8533301	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.4
19	8535469	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.181818
19	8540475	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.785714
19	8541044	A->G	-	ENSG00000142347	MYO1F	protein_coding	Intergenic	.	.	Alu	0.0869565
20	1484327	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.315789
20	1484805	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.230769
20	1484838	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.5
20	1485128	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.15
20	1485155	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.210526
20	1485207	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.2
20	1485249	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.3
20	1485253	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.5
20	1489914	A->G	-	ENSG00000196209	SIRPB2	protein_coding	Intergenic	.	.	Alu	0.25
20	2210851	A->G	-	ENSG00000226644	AL121899.1	lincRNA	Intergenic	.	.	Alu	0.0869565
20	3070100	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
20	3070616	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
20	3070617	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
20	3070657	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
20	3070729	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
20	3070740	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
20	3070763	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
20	3151020	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.2
20	3151026	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.214286
20	3151130	A->G	-	ENSG00000215251	FASTKD5	protein_coding	Intergenic	.	.	Alu	0.166667
20	3702356	A->G	-	ENSG00000088827	SIGLEC1	protein_coding	Intergenic	.	.	Alu	0.142857
20	3919146	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.153846
20	3919147	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.357143
20	3920354	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.4
20	3920369	A->G	+	ENSG00000125779	PANK2	protein_coding	Intergenic	.	.	Alu	0.166667
20	4693392	A->G	+	ENSG00000171867	PRNP	protein_coding	Intergenic	.	.	Alu	0.3
20	4794702	A->G	-	ENSG00000101265	RASSF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	5555293	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0526316
20	5555354	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5562460	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.1
20	5562465	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5564746	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0487805
20	5564779	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0625
20	5564791	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0540541
20	5564826	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.108108
20	5573016	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.285714
20	5573178	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
20	5573222	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.235294
20	5573304	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5573622	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.25
20	5573686	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5573693	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5587460	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
20	5587492	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.125
20	5587538	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5587562	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5587571	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	5587638	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5587645	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	5587655	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5588418	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0384615
20	5589367	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.212121
20	5589368	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0882353
20	5589407	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.075
20	5589439	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0454545
20	5589446	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0666667
20	5589464	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.06
20	5589490	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0350877
20	5589500	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0535714
20	5589512	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.186441
20	5590336	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0392157
20	5590338	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.047619
20	5590353	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.105263
20	5590375	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.04
20	5590378	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0517241
20	5590388	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.0461538
20	5600338	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.25
20	5600589	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5600669	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.2
20	5600710	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5600868	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.181818
20	5600907	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.230769
20	5601551	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.133333
20	5601641	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.153846
20	5602739	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.117647
20	5602766	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.08
20	5605536	A->G	-	ENSG00000125772	GPCPD1	protein_coding	Intergenic	.	.	Alu	0.5
1	11020860	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.25
1	11020869	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.2
1	11021530	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.181818
1	11021540	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.190476
1	11021885	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.357143
1	11021891	A->G	+	ENSG00000120948	TARDBP	protein_coding	Intergenic	.	.	Alu	0.333333
1	11798804	A->G	-	ENSG00000177000	MTHFR	protein_coding	Intergenic	.	.	Alu	0.133333
1	11798836	A->G	-	ENSG00000177000	MTHFR	protein_coding	Intergenic	.	.	Alu	0.153846
1	12174366	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.111111
1	12176201	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.0454545
1	12177740	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.12
1	12189045	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.102564
1	12196037	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.111111
1	12196072	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.1
1	12196222	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.1875
1	12196242	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.153846
1	12197131	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.1
1	12197148	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.173913
1	12197213	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.0588235
1	12197230	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.0810811
1	12200723	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.0285714
1	12200740	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.0333333
1	12200749	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.0322581
1	12200752	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.125
1	12201071	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.108696
1	12201113	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.0555556
1	12201149	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.170732
1	12201153	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.047619
1	12201492	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.142857
1	12205837	A->G	+	ENSG00000028137	TNFRSF1B	protein_coding	Intergenic	.	.	Alu	0.142857
1	12209843	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	12210288	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
1	13767574	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.2
1	13767901	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.25
1	13767931	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.142857
1	13768480	A->G	+	ENSG00000116731	PRDM2	protein_coding	Intergenic	.	.	Alu	0.153846
1	15490794	A->G	-	ENSG00000215704	CELA2B	protein_coding	Intergenic	.	.	Alu	0.363636
1	15490807	A->G	-	ENSG00000215704	CELA2B	protein_coding	Intergenic	.	.	Alu	0.181818
1	15513800	A->G	-	ENSG00000132906	CASP9	protein_coding	Intergenic	.	.	Alu	0.384615
1	15513805	A->G	-	ENSG00000132906	CASP9	protein_coding	Intergenic	.	.	Alu	0.230769
1	15513835	A->G	-	ENSG00000132906	CASP9	protein_coding	Intergenic	.	.	Alu	0.25
1	16373743	A->G	+	ENSG00000055070	SZRD1	protein_coding	Intergenic	.	.	Alu	0.25
1	16460682	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
1	17413874	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0652174
1	17414366	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	17414382	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0571429
1	17414447	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.129032
1	17414454	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.185185
1	17414483	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.107143
1	17414674	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0740741
1	17414721	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	17414724	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.222222
1	17414737	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.111111
1	17414801	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.166667
1	17414841	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0526316
1	17414889	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.238095
1	17414892	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.209302
1	17414893	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.075
1	17414909	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.04
1	17415545	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	17415548	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.176471
1	17415627	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0769231
1	17415812	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	17415825	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.0645161
1	17430601	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.538462
1	17430603	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.153846
1	17430620	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.2
1	17430640	A->G	-	ENSG00000179051	RCC2	protein_coding	Intergenic	.	.	Alu	0.153846
1	19158758	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.2
1	19158970	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.142857
1	19158979	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.142857
1	19159025	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.153846
1	19202995	A->G	-	ENSG00000127481	UBR4	protein_coding	Intergenic	.	.	Alu	0.166667
1	19599157	A->G	+	ENSG00000173436	MINOS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	20782977	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.2
1	20784999	A->G	-	ENSG00000127483	HP1BP3	protein_coding	Intergenic	.	.	Alu	0.25
1	21220579	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.125
1	21220640	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.4
1	21221371	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.4375
1	21228614	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.272727
1	21229312	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.142857
1	21229953	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.454545
1	21229954	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.2
1	21241278	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.214286
1	21241515	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.181818
1	21241577	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.5
1	21246337	A->G	-	ENSG00000117298	ECE1	protein_coding	Intergenic	.	.	Alu	0.230769
1	22062119	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.181818
1	22062156	A->G	+	ENSG00000230068	CDC42-IT1	sense_intronic	Intergenic	.	.	Alu	0.176471
1	23326015	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.333333
1	23326068	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23327568	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.2
1	23329802	A->G	-	ENSG00000125944	HNRNPR	protein_coding	Intergenic	.	.	Alu	0.181818
1	23782696	A->G	+	ENSG00000057757	PITHD1	protein_coding	Intergenic	.	.	Alu	0.272727
1	23782743	A->G	+	ENSG00000057757	PITHD1	protein_coding	Intergenic	.	.	Alu	0.2
1	23968743	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	1
1	23974663	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.285714
1	23974707	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.466667
1	23974717	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.125
1	23974728	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.166667
1	23974772	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intergenic	.	.	Alu	0.307692
1	24474150	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
1	24532366	A->G	+	ENSG00000117602	RCAN3	protein_coding	Intergenic	.	.	Alu	0.25
1	24532368	A->G	+	ENSG00000117602	RCAN3	protein_coding	Intergenic	.	.	Alu	0.166667
1	24532501	A->G	+	ENSG00000117602	RCAN3	protein_coding	Intergenic	.	.	Alu	0.727273
1	24663712	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.1875
1	24663718	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.117647
1	24663730	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.214286
1	24663757	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.153846
1	24663766	A->G	+	ENSG00000133226	SRRM1	protein_coding	Intergenic	.	.	Alu	0.333333
1	24674238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
1	24908133	A->G	-	ENSG00000020633	RUNX3	protein_coding	Intergenic	.	.	Alu	0.185185
1	25437366	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.1
1	25437404	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.388889
1	25437691	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.3
1	25437692	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.3
1	25444336	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.181818
1	25444347	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.181818
1	25444352	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.272727
1	25444362	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.181818
1	25444364	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.166667
1	25449554	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.3
1	25453106	A->G	+	ENSG00000204178	MACO1	protein_coding	Intergenic	.	.	Alu	0.181818
1	26550062	A->G	+	ENSG00000117676	RPS6KA1	protein_coding	Intergenic	.	.	Alu	0.2
1	26882272	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.15
1	26882276	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.1
1	26882301	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.208333
1	26882302	A->G	-	ENSG00000142751	GPN2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27628070	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.583333
1	27628072	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.166667
1	27632274	A->G	-	ENSG00000000938	FGR	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27874219	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.222222
1	27874244	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.529412
1	27874255	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.4375
1	27874270	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.285714
1	27874303	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.5
1	27874372	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.368421
1	27874383	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0869565
1	27874385	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.130435
1	27874386	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.125
1	27874416	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	27874526	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.611111
1	27874527	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27874549	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.136364
1	27874553	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.2
1	27874580	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.173913
1	27874834	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.169492
1	27874837	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.140351
1	27874851	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0363636
1	27874859	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.180328
1	27874861	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0491803
1	27874873	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.3125
1	27874876	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.306452
1	27875079	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0357143
1	27875082	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.037037
1	27875083	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0377358
1	27875118	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0454545
1	27875805	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0625
1	27875949	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0350877
1	27875964	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.107143
1	27876087	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.263158
1	27877330	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	27877465	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.190476
1	27880241	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.481481
1	27880253	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.181818
1	27880285	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.272727
1	27880289	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	27880302	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.117647
1	27880324	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.181818
1	27880351	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.166667
1	27880372	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.142857
1	27880391	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.375
1	27880408	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0689655
1	27880415	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0588235
1	27880447	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.175
1	27880531	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.038961
1	27880548	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.025
1	27880610	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.153846
1	27880651	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0784314
1	27880666	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.153846
1	27880676	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0625
1	27880689	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.176471
1	27880702	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.181818
1	27880829	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.3
1	27880832	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.307692
1	27880847	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.105263
1	27880871	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.6875
1	27880878	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.588235
1	27880907	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.285714
1	27880982	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.272727
1	27881027	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.15
1	27881040	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.318182
1	27881054	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	27881336	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.5
1	27881340	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.333333
1	27881363	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.15
1	27881383	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0740741
1	27881400	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0606061
1	27881421	A->G	+	ENSG00000130775	THEMIS2	protein_coding	Intergenic	.	.	Alu	0.0816327
1	28330008	A->G	+	ENSG00000130772	MED18	protein_coding	Intergenic	.	.	Alu	0.3
1	28330014	A->G	+	ENSG00000130772	MED18	protein_coding	Intergenic	.	.	Alu	0.181818
1	28330015	A->G	+	ENSG00000130772	MED18	protein_coding	Intergenic	.	.	Alu	0.181818
1	28511741	A->G	+	ENSG00000180198	RCC1	protein_coding	Intergenic	.	.	Alu	0.3
1	28744769	A->G	+	ENSG00000198492	YTHDF2	protein_coding	Intergenic	.	.	Alu	0.166667
1	28893037	A->G	+	ENSG00000159023	EPB41	protein_coding	Intergenic	.	.	Alu	0.133333
1	29174179	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.166667
1	29174838	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.333333
1	29175244	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0952381
1	29175247	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.1
1	29175305	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.238095
1	29177309	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.08
1	29177555	A->G	-	ENSG00000116350	SRSF4	protein_coding	Intergenic	.	.	Alu	0.0487805
1	30743974	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.282609
1	30743975	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.391304
1	30743982	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.219512
1	30743984	A->G	-	ENSG00000162511	LAPTM5	protein_coding	Intergenic	.	.	Alu	0.135135
1	31047129	A->G	-	ENSG00000134644	PUM1	protein_coding	Intergenic	.	.	Alu	0.166667
1	31265777	A->G	-	ENSG00000060688	SNRNP40	protein_coding	Intergenic	.	.	Alu	0.5
1	32222915	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.105263
1	32223519	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.125
1	32223565	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.1
1	32225165	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.307692
1	32225176	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.2
1	32227521	A->G	+	ENSG00000084623	EIF3I	protein_coding	Intergenic	.	.	Alu	0.2
1	32930248	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	32930278	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
1	32930337	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
1	32930382	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
1	32930435	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	32930441	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
1	32930502	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
1	32930520	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	32930530	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
1	32930534	A->G	-	.	.	.	Intergenic	.	.	Alu	0.227273
1	32930607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3125
1	32930624	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	32930635	A->G	-	.	.	.	Intergenic	.	.	Alu	0.470588
1	32930703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
1	32930843	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
1	32930844	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
1	32930870	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
1	32930922	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
1	32930966	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
1	32930979	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	32930980	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
1	32930988	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	32931001	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
1	32931005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
1	32931012	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
1	32931041	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
1	32933449	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
1	32934533	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
1	32934541	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
1	32934598	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	32934677	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
1	32941107	A->G	-	ENSG00000116514	RNF19B	protein_coding	Intergenic	.	.	Alu	0.166667
1	35947972	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.3
1	35947976	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.2
1	35977505	A->G	+	ENSG00000126070	AGO3	protein_coding	Intergenic	.	.	Alu	0.166667
1	36228318	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.0833333
1	36234089	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.272727
1	36234097	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	36235987	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	36237891	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.3
1	36237901	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	36238177	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.2
1	36238237	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.153846
1	36241712	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	36263320	A->G	+	ENSG00000054118	THRAP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	36346448	A->G	-	ENSG00000196182	STK40	protein_coding	Intergenic	.	.	Alu	0.3
1	36371070	A->G	-	ENSG00000196182	STK40	protein_coding	Intergenic	.	.	Alu	0.25
1	36376913	A->G	-	ENSG00000196182	STK40	protein_coding	Intergenic	.	.	Alu	0.125
1	36376976	A->G	-	ENSG00000196182	STK40	protein_coding	Intergenic	.	.	Alu	0.117647
1	36477891	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.125
1	36478527	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0833333
1	36478585	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.142857
1	36478588	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.44
1	36478591	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.0833333
1	36478603	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.176471
1	36478604	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.15
1	36478794	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.25
1	36478799	A->G	-	ENSG00000119535	CSF3R	protein_coding	Intergenic	.	.	Alu	0.4375
1	37547693	A->G	-	ENSG00000163877	SNIP1	protein_coding	Intergenic	.	.	Alu	0.2
1	37578682	A->G	-	ENSG00000134697	GNL2	protein_coding	Intergenic	.	.	Alu	0.2
1	37578722	A->G	-	ENSG00000134697	GNL2	protein_coding	Intergenic	.	.	Alu	0.222222
1	37578756	A->G	-	ENSG00000134697	GNL2	protein_coding	Intergenic	.	.	Alu	0.1
1	38002720	A->G	-	ENSG00000183386	FHL3	protein_coding	Intergenic	.	.	Alu	0.230769
1	38995847	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
1	38995857	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.25
1	38995884	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.117647
1	38995919	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.1875
1	38995954	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.1875
1	38995966	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.285714
1	38996194	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.166667
1	38996199	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.176471
1	38996234	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
1	38996659	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.125
1	38996669	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.25
1	38996736	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.222222
1	38996741	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.157895
1	38996745	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.15
1	38996781	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
1	38996791	A->G	+	ENSG00000174574	AKIRIN1	protein_coding	Intergenic	.	.	Alu	0.115385
1	40043291	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.2
1	40051294	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	40051295	A->G	+	ENSG00000131236	CAP1	protein_coding	Intergenic	.	.	Alu	0.166667
1	40074628	A->G	-	ENSG00000131238	PPT1	protein_coding	Intergenic	.	.	Alu	0.4
1	40227801	A->G	+	ENSG00000117000	RLF	protein_coding	Intergenic	.	.	Alu	0.2
1	40377085	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
1	40378194	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.181818
1	40378527	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.1
1	40378564	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.0714286
1	40402476	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.4
1	40402514	A->G	+	ENSG00000084070	SMAP2	protein_coding	Intergenic	.	.	Alu	0.333333
1	40694997	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.214286
1	40694998	A->G	+	ENSG00000066136	NFYC	protein_coding	Intergenic	.	.	Alu	0.142857
1	40999935	A->G	+	ENSG00000171793	CTPS1	protein_coding	Intergenic	.	.	Alu	0.047619
1	42770562	A->G	+	ENSG00000164008	C1orf50	protein_coding	Intergenic	.	.	Alu	0.153846
1	43672759	A->G	+	ENSG00000066135	KDM4A	protein_coding	Intergenic	.	.	Alu	0.2
1	44815662	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
1	44815708	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
1	44815807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
1	44815833	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
1	44815834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0645161
1	44815846	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
1	44818258	A->G	+	.	.	.	Intergenic	.	.	Alu	0.514286
1	44818753	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	44819714	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
1	46290357	A->G	-	ENSG00000132128	LRRC41	protein_coding	Intergenic	.	.	Alu	0.2
1	46295157	A->G	-	ENSG00000132128	LRRC41	protein_coding	Intergenic	.	.	Alu	0.181818
1	46310603	A->G	+	ENSG00000173660	UQCRH	protein_coding	Intergenic	.	.	Alu	0.307692
1	51242677	A->G	+	ENSG00000123091	RNF11	protein_coding	Intergenic	.	.	Alu	0.5
1	52066242	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.2
1	52073239	A->G	+	ENSG00000134717	BTF3L4	protein_coding	Intergenic	.	.	Alu	0.3
1	52407224	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.181818
1	52409347	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.0625
1	52409349	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.121212
1	52409415	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.230769
1	52409435	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.176471
1	52409449	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.125
1	52409451	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.3125
1	52409464	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.142857
1	52410682	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.2
1	52410689	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.2
1	52410730	A->G	+	ENSG00000134748	PRPF38A	protein_coding	Intergenic	.	.	Alu	0.176471
1	52483592	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.153846
1	52483627	A->G	-	ENSG00000134744	TUT4	protein_coding	Intergenic	.	.	Alu	0.181818
1	53229807	A->G	-	ENSG00000162385	MAGOH	protein_coding	Intergenic	.	.	Alu	0.466667
1	53230472	A->G	-	ENSG00000162385	MAGOH	protein_coding	Intergenic	.	.	Alu	0.153846
1	53230496	A->G	-	ENSG00000162385	MAGOH	protein_coding	Intergenic	.	.	Alu	0.142857
1	54718482	A->G	+	ENSG00000243725	TTC4	protein_coding	Intergenic	.	.	Alu	0.4
1	61719292	A->G	-	ENSG00000162604	TM2D1	protein_coding	Intergenic	.	.	Alu	0.153846
1	62449145	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	62449146	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.176471
1	62449158	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	62449710	A->G	+	ENSG00000162607	USP1	protein_coding	Intergenic	.	.	Alu	0.117647
1	64940999	A->G	-	ENSG00000162434	JAK1	protein_coding	Intergenic	.	.	Alu	0.2
1	70210359	A->G	+	ENSG00000116754	SRSF11	protein_coding	Intergenic	.	.	Alu	0.181818
1	70304600	A->G	-	ENSG00000118454	ANKRD13C	protein_coding	Intergenic	.	.	Alu	0.272727
1	70305001	A->G	-	ENSG00000118454	ANKRD13C	protein_coding	Intergenic	.	.	Alu	0.454545
1	77950221	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.1
1	77953273	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	77953408	A->G	-	ENSG00000162613	FUBP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	84931781	A->G	-	ENSG00000153898	MCOLN2	protein_coding	Intergenic	.	.	Alu	0.8
1	84931782	A->G	-	ENSG00000153898	MCOLN2	protein_coding	Intergenic	.	.	Alu	0.2
1	88855438	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.166667
1	88859579	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.125
1	88859585	A->G	-	ENSG00000137947	GTF2B	protein_coding	Intergenic	.	.	Alu	0.4
1	89643221	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.230769
1	89643233	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.25
1	89643303	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.105263
1	89643344	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.142857
1	89660333	A->G	+	ENSG00000230735	AC093423.2	sense_intronic	Intergenic	.	.	Alu	0.363636
1	93155764	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.428571
1	93157495	A->G	-	ENSG00000117500	TMED5	protein_coding	Intergenic	.	.	Alu	0.111111
1	93333213	A->G	-	ENSG00000223745	CCDC18-AS1	processed_transcript	Intergenic	.	.	Alu	0.166667
1	93874766	A->G	-	ENSG00000067334	DNTTIP2	protein_coding	Intergenic	.	.	Alu	0.05
1	97549140	A->G	-	ENSG00000188641	DPYD	protein_coding	Intergenic	.	.	Alu	0.454545
2	10308931	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.157895
2	10308960	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.5
2	10320546	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.272727
2	10334779	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.4
2	10334786	A->G	+	ENSG00000115756	HPCAL1	protein_coding	Intergenic	.	.	Alu	0.181818
2	20266313	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20266315	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.25
2	20266321	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20266331	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.1
2	20266350	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	20266398	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.166667
2	20266399	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.176471
2	20268377	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.153846
2	20271481	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.266667
2	20271482	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.214286
2	20271484	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.125
2	20271491	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.117647
2	20271493	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.125
2	20272149	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	20344284	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.214286
2	20345243	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.333333
2	20345249	A->G	-	ENSG00000055917	PUM2	protein_coding	Intergenic	.	.	Alu	0.2
2	24255426	A->G	-	ENSG00000198399	ITSN2	protein_coding	Intergenic	.	.	Alu	0.153846
2	26040537	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.181818
2	26119206	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.181818
2	26119208	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.166667
2	26119220	A->G	+	ENSG00000084733	RAB10	protein_coding	Intergenic	.	.	Alu	0.181818
2	26768713	A->G	+	ENSG00000213699	SLC35F6	protein_coding	Intergenic	.	.	Alu	0.133333
2	26768768	A->G	+	ENSG00000213699	SLC35F6	protein_coding	Intergenic	.	.	Alu	0.125
2	26768782	A->G	+	ENSG00000213699	SLC35F6	protein_coding	Intergenic	.	.	Alu	0.166667
2	26768808	A->G	+	ENSG00000213699	SLC35F6	protein_coding	Intergenic	.	.	Alu	0.181818
2	27210647	A->G	-	ENSG00000138074	SLC5A6	protein_coding	Intergenic	.	.	Alu	0.363636
2	27210648	A->G	-	ENSG00000138074	SLC5A6	protein_coding	Intergenic	.	.	Alu	0.454545
2	28759260	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28759282	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0869565
2	28759306	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28759802	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.181818
2	28759853	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.176471
2	28759881	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.142857
2	28784770	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0588235
2	28785335	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28785336	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28785556	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.111111
2	28785557	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0512821
2	28785583	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0714286
2	28785702	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28785738	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0789474
2	28786139	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.148148
2	28786194	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28786207	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.153846
2	28789249	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0847458
2	28789257	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0655738
2	28789291	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.210526
2	28789292	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0882353
2	28789356	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.08
2	28789357	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.130435
2	28789411	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0952381
2	28789429	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.103448
2	28789434	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.322581
2	28789464	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.233333
2	28789491	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.212121
2	28789497	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.264706
2	28789692	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.181818
2	28789698	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.7
2	28789699	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.583333
2	28789782	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.333333
2	28789808	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0888889
2	28789828	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0526316
2	28789833	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0333333
2	28789834	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0655738
2	28789849	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0483871
2	28790017	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.1
2	28790025	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0357143
2	28790026	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0714286
2	28790103	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.05
2	28790104	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.025974
2	28790130	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0655738
2	28790133	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0322581
2	28790137	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0327869
2	28790165	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0307692
2	28790192	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0384615
2	28790206	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.12963
2	28790213	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.283019
2	28790238	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.190476
2	28790365	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.125
2	28790433	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.2
2	28790439	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.157895
2	28790440	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.351351
2	28790457	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0740741
2	28790479	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.121212
2	28790549	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0540541
2	28790574	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.121951
2	28790602	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0645161
2	28791431	A->G	+	ENSG00000213639	PPP1CB	protein_coding	Intergenic	.	.	Alu	0.0714286
2	30154991	A->G	+	ENSG00000119801	YPEL5	protein_coding	Intergenic	.	.	Alu	0.0229885
2	30201407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
2	32281407	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.3
2	32281425	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.2
2	32300163	A->G	+	ENSG00000119820	YIPF4	protein_coding	Intergenic	.	.	Alu	0.181818
2	32396853	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.125
2	32396885	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.222222
2	32396950	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.08
2	32396957	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0714286
2	32396962	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.111111
2	32505871	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.08
2	32505946	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0392157
2	32505970	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0322581
2	32505974	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0392157
2	32505976	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0425532
2	32505999	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0444444
2	32506110	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0555556
2	32506111	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0344828
2	32506123	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.0441176
2	32507342	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.1
2	32508994	A->G	+	ENSG00000115760	BIRC6	protein_coding	Intergenic	.	.	Alu	0.9
2	36582367	A->G	-	ENSG00000171055	FEZ2	protein_coding	Intergenic	.	.	Alu	0.7
2	37111168	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.25
2	37152553	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.2
2	37153613	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	Intergenic	.	.	Alu	0.3
2	38582757	A->G	-	ENSG00000143889	HNRNPLL	protein_coding	Intergenic	.	.	Alu	0.2
2	39052910	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.148148
2	39052970	A->G	-	ENSG00000115904	SOS1	protein_coding	Intergenic	.	.	Alu	0.230769
2	39775216	A->G	-	ENSG00000138050	THUMPD2	protein_coding	Intergenic	.	.	Alu	0.272727
2	42176894	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42177508	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.142857
2	42177543	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.272727
2	42254336	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42255225	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42258530	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42258540	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.230769
2	42258586	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.363636
2	42258628	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	42258662	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.0869565
2	42258674	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.08
2	42259037	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.384615
2	42259086	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.25
2	42259188	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.2
2	42270413	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.125
2	42278427	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42281314	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.181818
2	42282493	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.15
2	42282494	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.0952381
2	42282506	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.521739
2	42282511	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.318182
2	42282519	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.105263
2	42282569	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.136364
2	42305183	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.142857
2	42307784	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.125
2	42307838	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.166667
2	42310488	A->G	+	ENSG00000143924	EML4	protein_coding	Intergenic	.	.	Alu	0.3
2	44210270	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.181818
2	44228914	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.142857
2	44228968	A->G	+	ENSG00000138032	PPM1B	protein_coding	Intergenic	.	.	Alu	0.153846
2	46945353	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.142857
2	46953357	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.214286
2	46953416	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.111111
2	46957195	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.157895
2	46991177	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.181818
2	46991402	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.166667
2	46991452	A->G	+	ENSG00000068724	TTC7A	protein_coding	Intergenic	.	.	Alu	0.153846
2	47168495	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.1
2	47168573	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.16
2	47168576	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.08
2	47169359	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intergenic	.	.	Alu	0.125
2	47814554	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0909091
2	47814580	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0769231
2	47814625	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.111111
2	47817904	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.0909091
2	47817931	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.125
2	47817985	A->G	-	ENSG00000138081	FBXO11	protein_coding	Intergenic	.	.	Alu	0.166667
2	53780561	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	53780634	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.117647
2	53781317	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.3
2	53781381	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.545455
2	53781607	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.153846
2	53781610	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.357143
2	53783062	A->G	-	ENSG00000115239	ASB3	protein_coding	Intergenic	.	.	Alu	0.181818
2	53871318	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0689655
2	53871319	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.1
2	53871323	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.344828
2	53871361	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.304348
2	53871521	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53871758	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53871763	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53871769	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.166667
2	53871770	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.333333
2	53871811	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53871866	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53871879	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.3
2	53871914	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.105263
2	53871931	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.428571
2	53874155	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0769231
2	53874197	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.0869565
2	53929838	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	53966496	A->G	-	ENSG00000068878	PSME4	protein_coding	Intergenic	.	.	Alu	0.2
2	55571054	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.181818
2	55571106	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.2
2	55571750	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.2
2	55575506	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.181818
2	55575637	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.416667
2	55575641	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.153846
2	55575642	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.166667
2	55575684	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.416667
2	55576227	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.181818
2	55611989	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.142857
2	55612989	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.166667
2	55613043	A->G	-	ENSG00000275052	PPP4R3B	protein_coding	Intergenic	.	.	Alu	0.2
2	55659083	A->G	-	ENSG00000138035	PNPT1	protein_coding	Intergenic	.	.	Alu	0.4
2	55659093	A->G	-	ENSG00000138035	PNPT1	protein_coding	Intergenic	.	.	Alu	0.384615
2	55659095	A->G	-	ENSG00000138035	PNPT1	protein_coding	Intergenic	.	.	Alu	0.461538
2	55659119	A->G	-	ENSG00000138035	PNPT1	protein_coding	Intergenic	.	.	Alu	0.230769
2	55659155	A->G	-	ENSG00000138035	PNPT1	protein_coding	Intergenic	.	.	Alu	0.4
2	60897542	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.153846
2	60903491	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.153846
2	60903499	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.181818
2	60903634	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.190476
2	60903651	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.111111
2	60903705	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.25
2	60903714	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.15
2	60903736	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.208333
2	60903783	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.105263
2	60903805	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.222222
2	60903869	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.4
2	60904217	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.1
2	60904251	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.133333
2	60904287	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.125
2	60904561	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.166667
2	60904796	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.153846
2	60905301	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.416667
2	60907445	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.2
2	60907513	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.142857
2	60907575	A->G	+	ENSG00000162924	REL	protein_coding	Intergenic	.	.	Alu	0.142857
2	60934762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
2	60934775	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
2	60934834	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
2	60934916	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	60935278	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
2	60935321	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
2	60935426	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0434783
2	60935448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
2	60935459	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
2	60935498	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
2	60935519	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
2	60935521	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
2	60935533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
2	60935535	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
2	61335567	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61337720	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.3
2	61337738	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.2
2	61337742	A->G	-	ENSG00000115464	USP34	protein_coding	Intergenic	.	.	Alu	0.4
2	61870862	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	61870867	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.153846
2	61871129	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.166667
2	61874450	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.2
2	61883242	A->G	-	ENSG00000115484	CCT4	protein_coding	Intergenic	.	.	Alu	0.5
2	64527469	A->G	+	ENSG00000119844	AFTPH	protein_coding	Intergenic	.	.	Alu	0.166667
2	65005904	A->G	+	ENSG00000115902	SLC1A4	protein_coding	Intergenic	.	.	Alu	0.2
2	65091674	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.235294
2	65092093	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.230769
2	65092110	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.214286
2	65092151	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.333333
2	65092207	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.133333
2	65092213	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.333333
2	65094108	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.333333
2	65094126	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.136364
2	65094148	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.136364
2	65094189	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.307692
2	65094197	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.416667
2	65094422	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.533333
2	65094428	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.333333
2	65094472	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.136364
2	65094501	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65094508	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.294118
2	65095287	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.230769
2	65095309	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.166667
2	65095552	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.272727
2	65096053	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.272727
2	65100954	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.181818
2	65107612	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.142857
2	65123660	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.3125
2	65123702	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.2
2	65124690	A->G	-	ENSG00000138069	RAB1A	protein_coding	Intergenic	.	.	Alu	0.4
2	65230679	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.8
2	65230799	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.333333
2	65230825	A->G	+	ENSG00000138071	ACTR2	protein_coding	Intergenic	.	.	Alu	0.117647
2	69511147	A->G	-	ENSG00000115977	AAK1	protein_coding	Intergenic	.	.	Alu	0.636364
2	69831018	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.181818
2	69831019	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.181818
2	69831100	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.25
2	69831103	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.166667
2	69831659	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.307692
2	69831719	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.142857
2	69831790	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.153846
2	69831843	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.307692
2	69831870	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.153846
2	69831989	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.166667
2	69832022	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.2
2	69832100	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.307692
2	69832127	A->G	+	ENSG00000087338	GMCL1	protein_coding	Intergenic	.	.	Alu	0.363636
2	69928665	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.1
2	69929113	A->G	+	ENSG00000059728	MXD1	protein_coding	Intergenic	.	.	Alu	0.133333
2	71386917	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.272727
2	71386941	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.142857
2	71386948	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.117647
2	71386960	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.125
2	71387550	A->G	+	ENSG00000075292	ZNF638	protein_coding	Intergenic	.	.	Alu	0.636364
2	73754888	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
2	73754892	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	73754900	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
2	85043739	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.2
2	85043770	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.133333
2	85045008	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.105263
2	85047392	A->G	+	ENSG00000176407	KCMF1	protein_coding	Intergenic	.	.	Alu	0.636364
2	85323098	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.428571
2	85323102	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.1875
2	85323150	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	85323231	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.181818
2	85323374	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.315789
2	85323411	A->G	-	ENSG00000152291	TGOLN2	protein_coding	Intergenic	.	.	Alu	0.133333
2	85856843	A->G	-	ENSG00000115525	ST3GAL5	protein_coding	Intergenic	.	.	Alu	0.5
2	86446945	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.5
2	86446951	A->G	+	ENSG00000115548	KDM3A	protein_coding	Intergenic	.	.	Alu	0.1875
2	87050194	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
2	87050279	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.363636
2	87050716	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
2	87050755	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
2	87050780	A->G	-	ENSG00000231259	AC125232.1	unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
2	87460249	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.388889
2	87460372	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.178571
2	87477466	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.1875
2	87480866	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.142857
2	87480876	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.166667
2	87480879	A->G	+	ENSG00000222041	CYTOR	lincRNA	Intergenic	.	.	Alu	0.166667
2	95836154	A->G	-	.	.	.	Intergenic	.	.	Alu	0.7
2	96127988	A->G	-	ENSG00000188886	ASTL	protein_coding	Intergenic	.	.	Alu	0.285714
2	96128016	A->G	-	ENSG00000188886	ASTL	protein_coding	Intergenic	.	.	Alu	0.125
2	96140005	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
2	96141631	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
2	96244045	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	96244811	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
2	96280008	A->G	-	ENSG00000144028	SNRNP200	protein_coding	Intergenic	.	.	Alu	0.363636
2	96545210	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.16
2	96545220	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.1
2	96545221	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.129032
2	96545226	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.0606061
2	96545231	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.0606061
2	96545236	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.0588235
2	96545256	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.0625
2	96545258	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.0909091
2	96545874	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.105263
2	96545899	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.148148
2	96545903	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.0714286
2	96545904	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.310345
2	96545906	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.0714286
2	96545909	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.148148
2	96545942	A->G	+	ENSG00000196843	ARID5A	protein_coding	Intergenic	.	.	Alu	0.1
2	96624949	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.3
2	96625055	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.25
2	96628421	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	96628433	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.2
2	96628535	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	96632569	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.15
2	96632604	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.473684
2	96632633	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.227273
2	96632635	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.421053
2	96635076	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.214286
2	96635097	A->G	-	ENSG00000114982	KANSL3	protein_coding	Intergenic	.	.	Alu	0.214286
2	97267706	A->G	+	.	.	.	Intergenic	.	.	Alu	0.157895
2	97579875	A->G	-	ENSG00000196912	ANKRD36B	protein_coding	Intergenic	.	.	Alu	0.411765
2	98496554	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.3
2	98496693	A->G	+	ENSG00000040933	INPP4A	protein_coding	Intergenic	.	.	Alu	0.3
2	99401624	A->G	+	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.2
2	99401977	A->G	+	ENSG00000135945	REV1	protein_coding	Intergenic	.	.	Alu	0.125
3	10020594	A->G	-	ENSG00000186162	CIDECP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
3	10122665	A->G	+	ENSG00000254999	BRK1	protein_coding	Intergenic	.	.	Alu	0.166667
3	10143548	A->G	+	ENSG00000134086	VHL	protein_coding	Intergenic	.	.	Alu	0.153846
3	10152303	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0333333
3	10152373	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0597015
3	10152375	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0327869
3	10152701	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
3	10152869	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
3	10153172	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0508475
3	10153282	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0606061
3	10303076	A->G	-	ENSG00000157020	SEC13	protein_coding	Intergenic	.	.	Alu	0.176471
3	12597793	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.181818
3	12597799	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.5
3	12597803	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12597857	A->G	-	ENSG00000132155	RAF1	protein_coding	Intergenic	.	.	Alu	0.2
3	12950803	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.6
3	12998914	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.357143
3	12998917	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.307692
3	12998918	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.230769
3	12999624	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.923077
3	12999629	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.357143
3	12999731	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.466667
3	12999732	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.785714
3	13001942	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.105263
3	13002037	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.272727
3	13002042	A->G	-	ENSG00000144711	IQSEC1	protein_coding	Intergenic	.	.	Alu	0.333333
3	13412165	A->G	-	ENSG00000132182	NUP210	protein_coding	Intergenic	.	.	Alu	0.117647
3	13412186	A->G	-	ENSG00000132182	NUP210	protein_coding	Intergenic	.	.	Alu	0.153846
3	14416875	A->G	+	ENSG00000131389	SLC6A6	protein_coding	Intergenic	.	.	Alu	0.153846
3	16310788	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.173913
3	16310789	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.391304
3	16310828	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.375
3	16310829	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.1875
3	16310869	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.230769
3	16310870	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.230769
3	16310875	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.153846
3	16310897	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.75
3	16310940	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.1875
3	16310941	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.3125
3	16337489	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.133333
3	16341263	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.909091
3	16341269	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.230769
3	16341506	A->G	+	ENSG00000154814	OXNAD1	protein_coding	Intergenic	.	.	Alu	0.5
3	19951544	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.111111
3	19951545	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.111111
3	19951547	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0634921
3	19951633	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0222222
3	19954757	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.0740741
3	19979532	A->G	+	ENSG00000144566	RAB5A	protein_coding	Intergenic	.	.	Alu	0.181818
3	23960189	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.142857
3	23960258	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.5
3	23960406	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.2
3	23960460	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.647059
3	23960470	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.529412
3	23960488	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.111111
3	23960567	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.727273
3	23966839	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.1875
3	23975569	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.142857
3	23975639	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.181818
3	23975652	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.7
3	23975678	A->G	+	ENSG00000174738	NR1D2	protein_coding	Intergenic	.	.	Alu	0.181818
3	28334026	A->G	-	ENSG00000163512	AZI2	protein_coding	Intergenic	.	.	Alu	0.3
3	28335047	A->G	-	ENSG00000163512	AZI2	protein_coding	Intergenic	.	.	Alu	0.5
3	32956499	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0526316
3	32956542	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0315789
3	32956546	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0444444
3	32956567	A->G	+	.	.	.	Intergenic	.	.	Alu	0.030303
3	32956665	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0425532
3	33545692	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.4
3	33545722	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.181818
3	33545825	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.2
3	33545847	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.363636
3	33549955	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.454545
3	33549969	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.9
3	33550147	A->G	-	ENSG00000163539	CLASP2	protein_coding	Intergenic	.	.	Alu	0.5
3	37044423	A->G	+	ENSG00000076242	MLH1	protein_coding	Intergenic	.	.	Alu	0.428571
3	37044437	A->G	+	ENSG00000076242	MLH1	protein_coding	Intergenic	.	.	Alu	0.153846
3	37072250	A->G	-	ENSG00000093167	LRRFIP2	protein_coding	Intergenic	.	.	Alu	0.25
3	38135140	A->G	-	ENSG00000060971	ACAA1	protein_coding	Intergenic	.	.	Alu	0.307692
3	38135427	A->G	-	ENSG00000060971	ACAA1	protein_coding	Intergenic	.	.	Alu	0.2
3	39393075	A->G	+	ENSG00000144659	SLC25A38	protein_coding	Intergenic	.	.	Alu	0.2
3	39393600	A->G	+	ENSG00000144659	SLC25A38	protein_coding	Intergenic	.	.	Alu	0.166667
3	39393734	A->G	+	ENSG00000144659	SLC25A38	protein_coding	Intergenic	.	.	Alu	0.181818
3	39409295	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.133333
3	39409382	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.235294
3	39409399	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.111111
3	39409475	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.176471
3	39409950	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.0425532
3	39409977	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.0769231
3	39410042	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.0833333
3	39410045	A->G	+	ENSG00000168028	RPSA	protein_coding	Intergenic	.	.	Alu	0.09375
3	39413020	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
3	39413472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
3	41210902	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.25
3	41210929	A->G	+	ENSG00000168036	CTNNB1	protein_coding	Intergenic	.	.	Alu	0.222222
3	42567099	A->G	-	ENSG00000093183	SEC22C	protein_coding	Intergenic	.	.	Alu	0.3
3	43293160	A->G	+	ENSG00000163788	SNRK	protein_coding	Intergenic	.	.	Alu	0.105263
3	43293798	A->G	+	ENSG00000163788	SNRK	protein_coding	Intergenic	.	.	Alu	0.181818
3	43293799	A->G	+	ENSG00000163788	SNRK	protein_coding	Intergenic	.	.	Alu	0.181818
3	46916918	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
3	46984251	A->G	+	ENSG00000160796	NBEAL2	protein_coding	Intergenic	.	.	Alu	0.117647
3	47086788	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.142857
3	47090136	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.363636
3	47090216	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.230769
3	47090233	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.307692
3	47090555	A->G	-	ENSG00000181555	SETD2	protein_coding	Intergenic	.	.	Alu	0.6
3	48923546	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
3	48923905	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.4
3	48923924	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.538462
3	48923952	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.285714
3	48923955	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.153846
3	48924023	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.0952381
3	48924032	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.0952381
3	48924615	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.153846
3	48925320	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.142857
3	48925524	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.0377358
3	48933200	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.2
3	48933790	A->G	+	ENSG00000177479	ARIH2	protein_coding	Intergenic	.	.	Alu	0.0333333
3	49009102	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.2
3	49009162	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.181818
3	49010460	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.214286
3	49011340	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.285714
3	49011341	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.466667
3	49011347	A->G	+	ENSG00000178252	WDR6	protein_coding	Intergenic	.	.	Alu	0.3125
3	49058466	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.2
3	49082141	A->G	-	ENSG00000198218	QRICH1	protein_coding	Intergenic	.	.	Alu	0.166667
3	49319072	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.363636
3	49319471	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.142857
3	49319522	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.117647
3	49319523	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.117647
3	49320055	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49320068	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.285714
3	49320081	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49320525	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.454545
3	49320585	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.25
3	49320587	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.117647
3	49321846	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.142857
3	49321873	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.181818
3	49321883	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49322616	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.333333
3	49322617	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.142857
3	49322678	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.181818
3	49322695	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.3
3	49322698	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.133333
3	49322712	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.117647
3	49322713	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.117647
3	49322717	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.1875
3	49322736	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49322739	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.277778
3	49322800	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.12
3	49322805	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.238095
3	49322818	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.0952381
3	49322843	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49323035	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49323039	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.285714
3	49323044	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.285714
3	49323135	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.3
3	49323136	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.2
3	49324041	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.1
3	49330108	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.166667
3	49330109	A->G	-	ENSG00000114316	USP4	protein_coding	Intergenic	.	.	Alu	0.153846
3	49373087	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.2
3	49373127	A->G	-	ENSG00000067560	RHOA	protein_coding	Intergenic	.	.	Alu	0.3
3	49778511	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.416667
3	49778521	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.153846
3	49778799	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.3
3	49779432	A->G	-	ENSG00000176095	IP6K1	protein_coding	Intergenic	.	.	Alu	0.3
3	50093089	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50093091	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.230769
3	50095055	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.08
3	50095186	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.103448
3	50096220	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.133333
3	50096225	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0606061
3	50096305	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.130435
3	50096621	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	50096690	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50096695	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0740741
3	50096702	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.142857
3	50096708	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.08
3	50096720	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.130435
3	50096797	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.157895
3	50096809	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.44
3	50097154	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.3125
3	50097383	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.181818
3	50098401	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.25
3	50098624	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	50098641	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.1
3	50098649	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.37931
3	50098702	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.166667
3	50098703	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.125
3	50098704	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.125
3	50098716	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.137931
3	50098777	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.40625
3	50098789	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50098841	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0606061
3	50098842	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0882353
3	50098848	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.257143
3	50098999	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.2
3	50099000	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.111111
3	50099094	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.103448
3	50099099	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0606061
3	50099211	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.129032
3	50111627	A->G	+	ENSG00000003756	RBM5	protein_coding	Intergenic	.	.	Alu	0.0540541
3	50332541	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.05
3	50332552	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.15625
3	50332557	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.21875
3	50332569	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0491803
3	50332585	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.175439
3	50332595	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.415094
3	50332596	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0408163
3	50332615	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0606061
3	50332625	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0952381
3	50332668	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0681818
3	50332692	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	50332697	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.047619
3	50332708	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.190476
3	50332740	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0625
3	50332774	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.142857
3	50332778	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.232558
3	50332838	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0571429
3	50332844	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.212121
3	50332851	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0588235
3	50332869	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	50332892	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.15
3	50332929	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.3
3	50332982	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.285714
3	50332985	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	50333008	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0666667
3	50333017	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0869565
3	50333042	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.108108
3	50333047	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0512821
3	50333569	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.173913
3	50333592	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0526316
3	50333605	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.116279
3	50333609	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0465116
3	50333644	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.08
3	50333674	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.037037
3	50333692	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	50333744	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.176471
3	50335514	A->G	-	ENSG00000068028	RASSF1	protein_coding	Intergenic	.	.	Alu	0.0350877
3	50662276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
3	51551827	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.0689655
3	51551852	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.115385
3	51551882	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.0714286
3	51551905	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.08
3	51551972	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.09375
3	51552002	A->G	+	ENSG00000164080	RAD54L2	protein_coding	Intergenic	.	.	Alu	0.0909091
3	52241324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
3	52252185	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
3	52689766	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.4
3	52689767	A->G	+	ENSG00000163938	GNL3	protein_coding	Intergenic	.	.	Alu	0.8
3	56636969	A->G	-	ENSG00000163946	FAM208A	protein_coding	Intergenic	.	.	Alu	0.272727
3	57577888	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.103448
3	57577959	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.354839
3	57578644	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.08
3	57578653	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.185185
3	57578657	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0869565
3	57578659	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.136364
3	57578662	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57579040	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0714286
3	57579139	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.125
3	57579140	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.125
3	57579416	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.1
3	57579425	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.3
3	57579426	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.15
3	57579448	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.12
3	57579465	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.08
3	57579537	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57579560	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0952381
3	57579945	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.133333
3	57579985	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.571429
3	57579989	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0769231
3	57580019	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0444444
3	57580074	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0909091
3	57580083	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.21875
3	57580091	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.075
3	57590817	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57591502	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.2
3	57592304	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.111111
3	57592388	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.16
3	57592405	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.125
3	57592431	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0952381
3	57592452	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.25
3	57593996	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.0714286
3	57594086	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.16
3	57594363	A->G	-	ENSG00000168374	ARF4	protein_coding	Intergenic	.	.	Alu	0.153846
3	58426651	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
3	58427528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
3	58427533	A->G	+	.	.	.	Intergenic	.	.	Alu	0.538462
3	58427562	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
3	69027223	A->G	-	ENSG00000244513	AC109587.1	antisense	Intergenic	.	.	Alu	0.2
3	71107036	A->G	-	ENSG00000114861	FOXP1	protein_coding	Intergenic	.	.	Alu	0.2
3	72440089	A->G	-	ENSG00000163602	RYBP	protein_coding	Intergenic	.	.	Alu	0.363636
3	88164734	A->G	+	ENSG00000179021	C3orf38	protein_coding	Intergenic	.	.	Alu	0.166667
3	88164794	A->G	+	ENSG00000179021	C3orf38	protein_coding	Intergenic	.	.	Alu	0.2
3	99841438	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.230769
3	99841439	A->G	+	ENSG00000184220	CMSS1	protein_coding	Intergenic	.	.	Alu	0.416667
4	15623961	A->G	-	ENSG00000118564	FBXL5	protein_coding	Intergenic	.	.	Alu	0.08
4	16220933	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.4
4	16220942	A->G	-	ENSG00000169762	TAPT1	protein_coding	Intergenic	.	.	Alu	0.545455
4	17592000	A->G	+	ENSG00000002549	LAP3	protein_coding	Intergenic	.	.	Alu	0.25
4	17592018	A->G	+	ENSG00000002549	LAP3	protein_coding	Intergenic	.	.	Alu	0.230769
4	17598990	A->G	+	ENSG00000002549	LAP3	protein_coding	Intergenic	.	.	Alu	0.166667
4	17599046	A->G	+	ENSG00000002549	LAP3	protein_coding	Intergenic	.	.	Alu	0.5
4	17599124	A->G	+	ENSG00000002549	LAP3	protein_coding	Intergenic	.	.	Alu	0.6
4	25279441	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
4	38682090	A->G	+	ENSG00000109787	KLF3	protein_coding	Intergenic	.	.	Alu	0.181818
4	38789600	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
4	39866279	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.3
4	39869214	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.153846
4	39869241	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.333333
4	39869249	A->G	-	ENSG00000121892	PDS5A	protein_coding	Intergenic	.	.	Alu	0.181818
4	40214428	A->G	+	ENSG00000168421	RHOH	protein_coding	Intergenic	.	.	Alu	0.153846
4	40595251	A->G	-	ENSG00000163694	RBM47	protein_coding	Intergenic	.	.	Alu	0.142857
4	41940670	A->G	+	ENSG00000109133	TMEM33	protein_coding	Intergenic	.	.	Alu	0.363636
4	48089267	A->G	-	ENSG00000074966	TXK	protein_coding	Intergenic	.	.	Alu	0.210526
4	48900718	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.2
4	48900722	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.3
4	48902718	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.416667
4	48902841	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.2
4	48902870	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.166667
4	48902922	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.153846
4	48904328	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.272727
4	48904435	A->G	-	ENSG00000145247	OCIAD2	protein_coding	Intergenic	.	.	Alu	0.3
4	53430572	A->G	+	ENSG00000145216	FIP1L1	protein_coding	Intergenic	.	.	Alu	0.181818
4	53998521	A->G	-	ENSG00000282278	AC058822.1	protein_coding	Intergenic	.	.	Alu	0.5
4	53998721	A->G	-	ENSG00000282278	AC058822.1	protein_coding	Intergenic	.	.	Alu	0.2
4	55406683	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.4
4	55410548	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intergenic	.	.	Alu	0.2
4	56470931	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.2
4	56475641	A->G	+	ENSG00000174780	SRP72	protein_coding	Intergenic	.	.	Alu	0.2
4	57000309	A->G	+	ENSG00000047315	POLR2B	protein_coding	Intergenic	.	.	Alu	0.142857
4	67474515	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.181818
4	67474541	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.153846
4	67517238	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.235294
4	67517300	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.157895
4	67517308	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.130435
4	67517326	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.526316
4	67517330	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.136364
4	67517356	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.0952381
4	67517381	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.1875
4	67517389	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.294118
4	67517621	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.210526
4	67517633	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.315789
4	67517672	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.235294
4	67517687	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.214286
4	67517690	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.428571
4	67517716	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.3
4	67517774	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.111111
4	67517790	A->G	-	ENSG00000145241	CENPC	protein_coding	Intergenic	.	.	Alu	0.333333
4	67647201	A->G	-	ENSG00000033178	UBA6	protein_coding	Intergenic	.	.	Alu	0.2
4	68327176	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.266667
4	68327179	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.2
4	68327205	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.142857
4	68327233	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.333333
4	68335937	A->G	-	ENSG00000083896	YTHDC1	protein_coding	Intergenic	.	.	Alu	0.25
4	74450318	A->G	+	ENSG00000109321	AREG	protein_coding	Intergenic	.	.	Alu	1
4	77778428	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.285714
4	77778491	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.2
4	77778530	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.5
4	77778534	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.2
4	77778544	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.181818
4	77778585	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.1
4	77778610	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.318182
4	77778611	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.227273
4	77778642	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.5625
4	77786055	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.266667
4	77786064	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.25
4	77786566	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.3
4	77790915	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.25
4	77790932	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.153846
4	77791153	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.4
4	77791156	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.4
4	77791274	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.25
4	77794004	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.125
4	77794069	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.181818
4	77794070	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.2
4	77795246	A->G	-	ENSG00000138767	CNOT6L	protein_coding	Intergenic	.	.	Alu	0.166667
4	81448857	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.140351
4	81448911	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0697674
4	81448926	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0465116
4	81448952	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0555556
4	81450283	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0740741
4	81450530	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0246914
4	81450647	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.0307692
4	81450801	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.181818
4	81450803	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.145833
4	81450841	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.148148
4	81450861	A->G	-	ENSG00000138670	RASGEF1B	protein_coding	Intergenic	.	.	Alu	0.04
4	82877117	A->G	-	ENSG00000138674	SEC31A	protein_coding	Intergenic	.	.	Alu	0.3
4	82896366	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.0952381
4	82896382	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.333333
4	82896391	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.0606061
4	82896394	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.0588235
4	82896395	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.0909091
4	82896411	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.137931
4	82896587	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.116279
4	82896611	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.142857
4	82896619	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.0731707
4	82896647	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intergenic	.	.	Alu	0.444444
4	83111090	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.2
4	83111103	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.3125
4	83111104	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.266667
4	83111168	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.25
4	83111196	A->G	-	ENSG00000145287	PLAC8	protein_coding	Intergenic	.	.	Alu	0.272727
4	83308306	A->G	-	ENSG00000173083	HPSE	protein_coding	Intergenic	.	.	Alu	0.0869565
4	83308359	A->G	-	ENSG00000173083	HPSE	protein_coding	Intergenic	.	.	Alu	0.272727
4	83539996	A->G	+	ENSG00000138678	GPAT3	protein_coding	Intergenic	.	.	Alu	0.2
4	88280172	A->G	-	ENSG00000163644	PPM1K	protein_coding	Intergenic	.	.	Alu	0.125
4	88280213	A->G	-	ENSG00000163644	PPM1K	protein_coding	Intergenic	.	.	Alu	0.272727
4	88456600	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
4	88456626	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
5	14604273	A->G	+	ENSG00000145569	OTULINL	protein_coding	Intergenic	.	.	Alu	0.105263
5	14715206	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.142857
5	14715211	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.142857
5	14715261	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.166667
5	14715271	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.2
5	14715287	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.230769
5	14715307	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.277778
5	14715311	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.222222
5	14715314	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.125
5	14715340	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.16
5	14716224	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.333333
5	14716230	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.2
5	14716291	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.0952381
5	14716331	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.1
5	14716334	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.166667
5	14716337	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.166667
5	14716346	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.125
5	14716372	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.117647
5	14716424	A->G	+	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.153846
5	14846922	A->G	-	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.2
5	14867033	A->G	-	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.133333
5	14867035	A->G	-	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.133333
5	14867074	A->G	-	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.176471
5	14867081	A->G	-	ENSG00000154122	ANKH	protein_coding	Intergenic	.	.	Alu	0.230769
5	32165326	A->G	-	ENSG00000113384	GOLPH3	protein_coding	Intergenic	.	.	Alu	0.166667
5	32589307	A->G	+	ENSG00000113387	SUB1	protein_coding	Intergenic	.	.	Alu	0.0540541
5	32589349	A->G	+	ENSG00000113387	SUB1	protein_coding	Intergenic	.	.	Alu	0.108108
5	34219917	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.928571
5	34953341	A->G	+	ENSG00000168724	DNAJC21	protein_coding	Intergenic	.	.	Alu	0.4
5	35870486	A->G	+	ENSG00000168685	IL7R	protein_coding	Intergenic	.	.	Alu	1
5	37050370	A->G	+	ENSG00000164190	NIPBL	protein_coding	Intergenic	.	.	Alu	0.3
5	37382314	A->G	+	ENSG00000082068	WDR70	protein_coding	Intergenic	.	.	Alu	0.2
5	38968526	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.181818
5	38968583	A->G	-	ENSG00000164327	RICTOR	protein_coding	Intergenic	.	.	Alu	0.4
5	40687146	A->G	+	ENSG00000171522	PTGER4	protein_coding	Intergenic	.	.	Alu	0.0526316
5	40691311	A->G	+	ENSG00000171522	PTGER4	protein_coding	Intergenic	.	.	Alu	0.2
5	42952468	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
5	42952982	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
5	43125687	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.181818
5	43133299	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.111111
5	43133344	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.181818
5	43133421	A->G	+	ENSG00000172262	ZNF131	protein_coding	Intergenic	.	.	Alu	0.153846
5	44816383	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.125
5	44816387	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intergenic	.	.	Alu	0.133333
5	50413587	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.105263
5	50413687	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.222222
5	50413714	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.0952381
5	50414304	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.125
5	50414307	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.363636
5	50414308	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.047619
5	50414333	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.259259
5	50414352	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.35
5	50414403	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.133333
5	50414405	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.230769
5	50414431	A->G	-	ENSG00000170571	EMB	protein_coding	Intergenic	.	.	Alu	0.272727
5	50746908	A->G	+	ENSG00000151883	PARP8	protein_coding	Intergenic	.	.	Alu	0.25
5	55953486	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.166667
5	55953487	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.428571
5	55953527	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.25
5	55953528	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.125
5	55953550	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.625
5	55953554	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.1875
5	55953558	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.166667
5	55953833	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.111111
5	55953839	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.1875
5	55953905	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.2
5	55953911	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.916667
5	55953956	A->G	-	ENSG00000134352	IL6ST	protein_coding	Intergenic	.	.	Alu	0.230769
5	59022955	A->G	-	ENSG00000113448	PDE4D	protein_coding	Intergenic	.	.	Alu	0.153846
5	61156381	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
5	61156495	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
5	61156646	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0833333
5	61156651	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
5	61156686	A->G	-	.	.	.	Intergenic	.	.	Alu	0.692308
5	61157367	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0882353
5	61157368	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
5	61157421	A->G	-	.	.	.	Intergenic	.	.	Alu	0.047619
5	61157437	A->G	-	.	.	.	Intergenic	.	.	Alu	0.102564
5	61157444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
5	61157464	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
5	61366850	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.3
5	61367305	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.25
5	61367356	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.153846
5	61367522	A->G	+	ENSG00000130449	ZSWIM6	protein_coding	Intergenic	.	.	Alu	0.214286
5	65581483	A->G	+	ENSG00000113593	PPWD1	protein_coding	Intergenic	.	.	Alu	0.4375
5	65581561	A->G	+	ENSG00000113593	PPWD1	protein_coding	Intergenic	.	.	Alu	0.117647
5	66148662	A->G	+	ENSG00000153914	SREK1	protein_coding	Intergenic	.	.	Alu	0.2
5	68240633	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	1
5	68288930	A->G	+	ENSG00000145675	PIK3R1	protein_coding	Intergenic	.	.	Alu	0.454545
5	69095382	A->G	+	ENSG00000145740	SLC30A5	protein_coding	Intergenic	.	.	Alu	0.2
5	69367018	A->G	-	ENSG00000085231	AK6	protein_coding	Intergenic	.	.	Alu	0.384615
5	72905817	A->G	+	ENSG00000083312	TNPO1	protein_coding	Intergenic	.	.	Alu	0.272727
5	74742939	A->G	-	ENSG00000164347	GFM2	protein_coding	Intergenic	.	.	Alu	0.2
5	79240145	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.2
5	79313339	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.08
5	79316813	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.166667
5	79320139	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.181818
5	79320260	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.181818
5	79320451	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.153846
5	79320453	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.117647
5	79320492	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.117647
5	79320495	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.428571
5	79320571	A->G	+	ENSG00000152409	JMY	protein_coding	Intergenic	.	.	Alu	0.181818
5	83516085	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.266667
5	83516271	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	0.25
5	83528929	A->G	+	ENSG00000038427	VCAN	protein_coding	Intergenic	.	.	Alu	1
5	83573469	A->G	+	ENSG00000249835	VCAN-AS1	antisense	Intergenic	.	.	Alu	0.541667
5	83573476	A->G	+	ENSG00000249835	VCAN-AS1	antisense	Intergenic	.	.	Alu	0.157895
5	83573482	A->G	+	ENSG00000249835	VCAN-AS1	antisense	Intergenic	.	.	Alu	0.263158
5	87375293	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.0952381
5	87375399	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.117647
5	87382721	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.37931
5	87397193	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.0952381
5	87397231	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.0909091
5	87398784	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.217391
5	87398849	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.117647
5	87398851	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.125
5	87398891	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.125
5	87406539	A->G	-	ENSG00000134480	CCNH	protein_coding	Intergenic	.	.	Alu	0.2
5	91301073	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
5	91304161	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.107143
5	91304162	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0689655
5	91305008	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0512821
5	91305416	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0869565
5	91305433	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.206349
5	91305434	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.09375
5	91308406	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.037037
5	91308542	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0408163
5	91308543	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.08
5	91309024	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0422535
5	91309082	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0294118
5	91309549	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.08
5	91310098	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0649351
5	91310107	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0246914
5	91310152	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0645161
5	91310190	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0952381
5	91310211	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0327869
5	91310285	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0816327
5	91310291	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.108696
5	91310331	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.111111
5	91310333	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.0535714
5	91310335	A->G	-	ENSG00000248323	LUCAT1	lincRNA	Intergenic	.	.	Alu	0.127273
5	95892212	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0882353
5	95892223	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0526316
5	95892232	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.272727
5	95892285	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0625
5	95892329	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0606061
5	95892340	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.12
5	95892345	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.103448
5	95892348	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.15625
5	95893415	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0606061
5	95894054	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.138889
5	95894066	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.135135
5	95894128	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.04
5	95894143	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0392157
5	95894177	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0416667
5	95923125	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0714286
5	95923150	A->G	-	ENSG00000118985	ELL2	protein_coding	Intergenic	.	.	Alu	0.0571429
5	98862035	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.178571
5	98862045	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.172414
5	98862230	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98867875	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.307692
5	98867940	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.555556
5	98867977	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0645161
5	98868277	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	98868281	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.142857
5	98891136	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.411765
5	98891171	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98891284	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.4
5	98891309	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.266667
5	98891314	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.625
5	98891554	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.4
5	98891654	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1875
5	98891754	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.28
5	98891765	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.133333
5	98891775	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.347826
5	98894933	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0625
5	98894989	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	98895003	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98895628	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0810811
5	98895631	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0571429
5	98895645	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.111111
5	98895670	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.151515
5	98895671	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0588235
5	98895677	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	98895690	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0731707
5	98895717	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	98895989	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	98896049	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0967742
5	98896081	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0882353
5	98896083	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	98918640	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.166667
5	98918644	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.125
5	98918656	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	98918659	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.15
5	98918660	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.25
5	98922108	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.1
5	98922148	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	98923450	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.162162
5	98923518	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.15
5	98923582	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	98923584	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	98923615	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.153846
5	98923685	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.142857
5	98923686	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.214286
5	98923997	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0638298
5	98923999	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.162162
5	98924161	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.14
5	98924199	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0454545
5	98924215	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0857143
5	98924245	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.310345
5	98924883	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0625
5	98925343	A->G	-	ENSG00000153922	CHD1	protein_coding	Intergenic	.	.	Alu	0.0789474
6	11361592	A->G	-	ENSG00000111859	NEDD9	protein_coding	Intergenic	.	.	Alu	0.3
6	11361606	A->G	-	ENSG00000111859	NEDD9	protein_coding	Intergenic	.	.	Alu	0.3
6	14121524	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0307692
6	14121546	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0285714
6	14121547	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.0985915
6	14121554	A->G	+	ENSG00000112149	CD83	protein_coding	Intergenic	.	.	Alu	0.025974
6	15251141	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15251813	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.142857
6	15251857	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.111111
6	15251858	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.117647
6	15255244	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.136364
6	15273650	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15273651	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	15277376	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.2
6	15294439	A->G	+	ENSG00000008083	JARID2	protein_coding	Intergenic	.	.	Alu	0.181818
6	17658355	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.181818
6	17668767	A->G	-	ENSG00000124789	NUP153	protein_coding	Intergenic	.	.	Alu	0.166667
6	17762439	A->G	-	ENSG00000137177	KIF13A	protein_coding	Intergenic	.	.	Alu	0.2
6	17762446	A->G	-	ENSG00000137177	KIF13A	protein_coding	Intergenic	.	.	Alu	0.8
6	24707606	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.117647
6	24707759	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.117647
6	24708476	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.2
6	24710868	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0571429
6	24710916	A->G	-	ENSG00000112308	C6orf62	protein_coding	Intergenic	.	.	Alu	0.0857143
6	24833418	A->G	-	ENSG00000111913	RIPOR2	protein_coding	Intergenic	.	.	Alu	0.3
6	25964911	A->G	+	ENSG00000112343	TRIM38	protein_coding	Intergenic	.	.	Alu	0.153846
6	30199832	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.2
6	30199841	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.25
6	30199903	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.6
6	30200026	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.0909091
6	30200027	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.227273
6	30200036	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.35
6	30200099	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.272727
6	30200160	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.142857
6	30200165	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.428571
6	30200206	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.105263
6	30200232	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.153846
6	30200235	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.166667
6	30200241	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.65
6	30200276	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.318182
6	30201809	A->G	-	ENSG00000234127	TRIM26	protein_coding	Intergenic	.	.	Alu	0.2
6	30322871	A->G	-	ENSG00000231074	HCG18	antisense	Intergenic	.	.	Alu	0.117647
6	30551986	A->G	-	ENSG00000204590	GNL1	protein_coding	Intergenic	.	.	Alu	0.166667
6	30591813	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.0952381
6	30591872	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.2
6	30591874	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.2
6	30591876	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.2
6	30591901	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.105263
6	30591951	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.111111
6	30592024	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.75
6	30592050	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.0952381
6	30592051	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.47619
6	30592076	A->G	+	ENSG00000204574	ABCF1	protein_coding	Intergenic	.	.	Alu	0.142857
6	30732551	A->G	-	ENSG00000137312	FLOT1	protein_coding	Intergenic	.	.	Alu	0.181818
6	30733506	A->G	-	ENSG00000137312	FLOT1	protein_coding	Intergenic	.	.	Alu	0.166667
6	30736000	A->G	-	ENSG00000137312	FLOT1	protein_coding	Intergenic	.	.	Alu	0.363636
6	31537870	A->G	-	ENSG00000198563	DDX39B	protein_coding	Intergenic	.	.	Alu	0.25
6	31699967	A->G	-	ENSG00000204427	ABHD16A	protein_coding	Intergenic	.	.	Alu	0.153846
6	32577900	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
6	32580495	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	0.222222
6	32582806	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	0.5
6	32586925	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	0.241379
6	32589362	A->G	-	ENSG00000196126	HLA-DRB1	protein_coding	Intergenic	.	.	Alu	0.272727
6	33307179	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.3
6	33308078	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.181818
6	33309444	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.142857
6	33310261	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.2
6	33310318	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.733333
6	33310323	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.533333
6	33310343	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.117647
6	33310406	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.235294
6	33310702	A->G	-	ENSG00000231925	TAPBP	protein_coding	Intergenic	.	.	Alu	0.2
6	34422590	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.15
6	34422655	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.3125
6	34422662	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.285714
6	34422901	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.142857
6	34422957	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.133333
6	34423058	A->G	-	ENSG00000124614	RPS10	protein_coding	Intergenic	.	.	Alu	0.0714286
6	34882393	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.5
6	34882520	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.166667
6	34882522	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.333333
6	34882764	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.142857
6	34882771	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.142857
6	34882777	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.214286
6	34885756	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.142857
6	34885859	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.166667
6	34887180	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.4
6	34887215	A->G	-	ENSG00000064995	TAF11	protein_coding	Intergenic	.	.	Alu	0.2
6	35315251	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.08
6	35315257	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.08
6	35315259	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.12
6	35315318	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.178571
6	35315320	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.1
6	35316240	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.148148
6	35316243	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.0769231
6	35316257	A->G	+	ENSG00000023892	DEF6	protein_coding	Intergenic	.	.	Alu	0.0666667
6	35354533	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.142857
6	35355259	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.222222
6	35355274	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.0952381
6	35355431	A->G	+	ENSG00000112033	PPARD	protein_coding	Intergenic	.	.	Alu	0.4
6	35471221	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	35471225	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
6	35571272	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
6	35571278	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	35571338	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
6	35572598	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
6	35572600	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
6	35573385	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
6	35578685	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.363636
6	35648475	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	1
6	35648479	A->G	-	ENSG00000096060	FKBP5	protein_coding	Intergenic	.	.	Alu	0.5
6	36128386	A->G	+	ENSG00000156711	MAPK13	protein_coding	Intergenic	.	.	Alu	0.25
6	36446728	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.178571
6	36457072	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.125
6	36470774	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.2
6	36471096	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.4
6	36473039	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.214286
6	36482764	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.454545
6	36482826	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.2
6	36483714	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.181818
6	36483733	A->G	+	ENSG00000112078	KCTD20	protein_coding	Intergenic	.	.	Alu	0.428571
6	36500505	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.333333
6	36501220	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.25
6	36501225	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.166667
6	36501232	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.384615
6	36501248	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.357143
6	36501604	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.153846
6	36501652	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.181818
6	36541862	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.125
6	36541961	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0952381
6	36542107	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.181818
6	36542532	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.384615
6	36542563	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.153846
6	36542597	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.166667
6	36542679	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.181818
6	36543307	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.5
6	36543337	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.5
6	36543338	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.636364
6	36543346	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.5
6	36543515	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.315789
6	36543526	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.136364
6	36543527	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.190476
6	36543569	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.125
6	36543573	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.166667
6	36543589	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.583333
6	36543595	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.230769
6	36543664	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.142857
6	36543827	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.181818
6	36543833	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.666667
6	36543837	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.307692
6	36543876	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.272727
6	36543906	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.266667
6	36543907	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.133333
6	36544686	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0869565
6	36544700	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.111111
6	36544701	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.411765
6	36544732	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.266667
6	36544750	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.3125
6	36544760	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.2
6	36544777	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.307692
6	36544786	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.181818
6	36544789	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.333333
6	36544790	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.3125
6	36544828	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.0740741
6	36544868	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.173913
6	36544869	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.217391
6	36545045	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.3
6	36545055	A->G	-	ENSG00000112079	STK38	protein_coding	Intergenic	.	.	Alu	0.4
6	36606093	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
6	36682189	A->G	+	ENSG00000124762	CDKN1A	protein_coding	Intergenic	.	.	Alu	0.16
6	36973875	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.6
6	36973900	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.416667
6	36974015	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.266667
6	36974016	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.2
6	36974021	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.416667
6	36974024	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.384615
6	36974913	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.1875
6	36974920	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.285714
6	36974993	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.285714
6	36974994	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.230769
6	36974995	A->G	-	ENSG00000137409	MTCH1	protein_coding	Intergenic	.	.	Alu	0.230769
6	41277984	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.136364
6	41277987	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.173913
6	41278153	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.1
6	41278221	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0909091
6	41278410	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0980392
6	41278448	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.0681818
6	41278505	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.15
6	41278541	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.111111
6	41278561	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.125
6	41278564	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.125
6	41278565	A->G	-	ENSG00000124731	TREM1	protein_coding	Intergenic	.	.	Alu	0.333333
6	42785373	A->G	+	ENSG00000112624	BICRAL	protein_coding	Intergenic	.	.	Alu	0.0833333
6	42789455	A->G	+	ENSG00000112624	BICRAL	protein_coding	Intergenic	.	.	Alu	0.2
6	42940220	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	42940227	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
6	42941381	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.263158
6	42941415	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.125
6	42941416	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.2
6	42941424	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.235294
6	42941618	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.3125
6	42941688	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.153846
6	42942067	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.25
6	42942440	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.3125
6	42943043	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.307692
6	42943327	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.0833333
6	42943354	A->G	+	ENSG00000231113	AL035587.1	antisense	Intergenic	.	.	Alu	0.1
6	43029646	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0952381
6	43029689	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.125
6	43029778	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.0952381
6	43029794	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.16
6	43030303	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.166667
6	43030363	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.210526
6	43030364	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.352941
6	43030379	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.117647
6	43030475	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.133333
6	43030484	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.125
6	43030513	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.176471
6	43030692	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.142857
6	43030709	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1
6	43030710	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.1
6	43030721	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.105263
6	43030771	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.214286
6	43030780	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.272727
6	43030973	A->G	+	ENSG00000124541	RRP36	protein_coding	Intergenic	.	.	Alu	0.222222
6	53271307	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.285714
6	53272336	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.384615
6	53272364	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.133333
6	53272406	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.153846
6	53286327	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.5
6	53292534	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.363636
6	53292753	A->G	-	ENSG00000012660	ELOVL5	protein_coding	Intergenic	.	.	Alu	0.2
6	73514124	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
6	75238621	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.214286
6	75238622	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.214286
6	75238657	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.2
6	75238881	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.241379
6	75238947	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.0869565
6	75238963	A->G	-	ENSG00000112695	COX7A2	protein_coding	Intergenic	.	.	Alu	0.08
6	75636966	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.117647
6	75636981	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.1
6	75637014	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.1875
6	75638059	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.3
6	75638984	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.117647
6	75638990	A->G	+	ENSG00000112701	SENP6	protein_coding	Intergenic	.	.	Alu	0.166667
6	87688116	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.2
6	87688286	A->G	-	ENSG00000135334	AKIRIN2	protein_coding	Intergenic	.	.	Alu	0.181818
6	90283851	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.142857
6	90283880	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.166667
6	90283884	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.181818
6	90283980	A->G	-	ENSG00000112182	BACH2	protein_coding	Intergenic	.	.	Alu	0.230769
6	99405343	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.384615
6	99405355	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.636364
6	99418336	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.2
6	99418892	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.142857
6	99418898	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.272727
6	99421732	A->G	-	ENSG00000132424	PNISR	protein_coding	Intergenic	.	.	Alu	0.307692
7	23301527	A->G	+	ENSG00000156928	MALSU1	protein_coding	Intergenic	.	.	Alu	0.3
7	23509822	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.181818
7	23518158	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.142857
7	23524219	A->G	-	ENSG00000164548	TRA2A	protein_coding	Intergenic	.	.	Alu	0.0769231
7	27796719	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.272727
7	27805743	A->G	+	ENSG00000106052	TAX1BP1	protein_coding	Intergenic	.	.	Alu	0.166667
7	32505438	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.294118
7	32505443	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.111111
7	32505451	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.578947
7	32505475	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.105263
7	32505498	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.75
7	32520007	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.666667
7	32562658	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.285714
7	32562664	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.125
7	32562665	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.117647
7	32562801	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.166667
7	32562829	A->G	+	ENSG00000105778	AVL9	protein_coding	Intergenic	.	.	Alu	0.2
7	32875406	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32876726	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.190476
7	32876759	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.130435
7	32876773	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.238095
7	32876784	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.15
7	32876793	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.346154
7	32876829	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.0588235
7	32876845	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.352941
7	32877133	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.181818
7	32877156	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32877173	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32877207	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.142857
7	32877212	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32877213	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	32877235	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.166667
7	32877964	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	32878003	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.117647
7	32885075	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.117647
7	32885094	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.0769231
7	32885155	A->G	-	ENSG00000170852	KBTBD2	protein_coding	Intergenic	.	.	Alu	0.25
7	36496660	A->G	-	ENSG00000237400	AC006960.2	antisense	Intergenic	.	.	Alu	0.3
7	36537557	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.142857
7	36537594	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.272727
7	36538088	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.153846
7	36538093	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.166667
7	36538120	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.416667
7	36538227	A->G	-	ENSG00000136250	AOAH	protein_coding	Intergenic	.	.	Alu	0.2
7	38241704	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.2
7	38243140	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.2
7	38247476	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.230769
7	38247539	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.153846
7	38247556	A->G	-	ENSG00000227191	TRGC2	TR_C_gene	Intergenic	.	.	Alu	0.117647
7	40005067	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.2
7	40054974	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.25
7	40066122	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.181818
7	40066136	A->G	+	ENSG00000065883	CDK13	protein_coding	Intergenic	.	.	Alu	0.454545
7	43597482	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.352941
7	43597507	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.2
7	43597570	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.153846
7	43597700	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.166667
7	43597701	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.25
7	43615215	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.2
7	43615288	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.181818
7	43615301	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.2
7	43615366	A->G	+	ENSG00000164543	STK17A	protein_coding	Intergenic	.	.	Alu	0.1875
7	44577373	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	44577432	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	44625152	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.5
7	44625204	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.097561
7	44625205	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.097561
7	44625225	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.0392157
7	44625893	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.1
7	44625902	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.133333
7	44625912	A->G	+	ENSG00000105953	OGDH	protein_coding	Intergenic	.	.	Alu	0.625
7	44831055	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0961538
7	44831091	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0588235
7	44832863	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0408163
7	44833335	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0416667
7	44833632	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.038961
7	44836695	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.133333
7	44836718	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44836740	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0909091
7	44836753	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0909091
7	44836933	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44837174	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0952381
7	44837642	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.206897
7	44837651	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0882353
7	44837660	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0555556
7	44837766	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.181818
7	44838459	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.222222
7	44838468	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.222222
7	44838647	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.5
7	44839332	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.153846
7	44840143	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.142857
7	44840353	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1875
7	44840359	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.352941
7	44840360	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.117647
7	44840545	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.230769
7	44840649	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.444444
7	44840662	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0952381
7	44840688	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.0869565
7	44840731	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.1
7	44842973	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.133333
7	44842995	A->G	-	ENSG00000105968	H2AFV	protein_coding	Intergenic	.	.	Alu	0.2
7	45111036	A->G	-	ENSG00000136270	TBRG4	protein_coding	Intergenic	.	.	Alu	0.125
7	47962474	A->G	-	ENSG00000136273	HUS1	protein_coding	Intergenic	.	.	Alu	0.117647
7	48092591	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0350877
7	48092780	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0571429
7	48093904	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.413793
7	48093905	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0740741
7	48093983	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0625
7	48093984	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.121212
7	48094039	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0689655
7	48094049	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0571429
7	48094314	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.138462
7	48094345	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0714286
7	48094381	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0967742
7	48094382	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.03125
7	48094396	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.031746
7	48094399	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0645161
7	48094418	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0350877
7	48104019	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0526316
7	48104041	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0769231
7	48104057	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.0833333
7	48104124	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.125
7	48104146	A->G	+	ENSG00000183696	UPP1	protein_coding	Intergenic	.	.	Alu	0.15
7	50374475	A->G	+	ENSG00000185811	IKZF1	protein_coding	Intergenic	.	.	Alu	0.363636
7	55392073	A->G	+	ENSG00000132434	LANCL2	protein_coding	Intergenic	.	.	Alu	0.461538
7	55433865	A->G	-	.	.	.	Intergenic	.	.	Alu	0.785714
7	55433871	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
7	55433883	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	55433884	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
7	55434450	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
7	55434452	A->G	-	.	.	.	Intergenic	.	.	Alu	0.466667
7	55434453	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
7	55434461	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
7	55434469	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
7	55454394	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.15
7	55456067	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.142857
7	55456218	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.208333
7	55456361	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.147059
7	55457548	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.09375
7	55458080	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.0882353
7	55458303	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.0857143
7	55458612	A->G	-	ENSG00000154978	VOPP1	protein_coding	Intergenic	.	.	Alu	0.111111
7	56105729	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.142857
7	56105734	A->G	-	ENSG00000106153	CHCHD2	protein_coding	Intergenic	.	.	Alu	0.153846
7	65000690	A->G	-	ENSG00000152926	ZNF117	protein_coding	Intergenic	.	.	Alu	0.307692
7	66078735	A->G	+	ENSG00000126522	ASL	protein_coding	Intergenic	.	.	Alu	0.3
7	66078807	A->G	+	ENSG00000126522	ASL	protein_coding	Intergenic	.	.	Alu	0.363636
7	66081346	A->G	+	ENSG00000126522	ASL	protein_coding	Intergenic	.	.	Alu	0.181818
7	66090023	A->G	+	ENSG00000126522	ASL	protein_coding	Intergenic	.	.	Alu	0.2
7	66154716	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.2
7	66155321	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.363636
7	66155637	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.4
7	66155663	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.181818
7	66155673	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.272727
7	66155675	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.272727
7	66155710	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.133333
7	66155747	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.235294
7	66155772	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.388889
7	66155789	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.263158
7	66155811	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.388889
7	66156604	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.2
7	66156605	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.133333
7	66156617	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.3125
7	66159828	A->G	+	ENSG00000234185	AC068533.3	antisense	Intergenic	.	.	Alu	0.181818
7	66538820	A->G	-	ENSG00000234500	AC008267.3	unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	66545337	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
7	66590623	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
7	66590645	A->G	-	ENSG00000229180	AC006001.3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
7	66656700	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.166667
7	66658300	A->G	+	ENSG00000226824	AC006001.2	sense_intronic	Intergenic	.	.	Alu	0.2
7	66683853	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0769231
7	66683925	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.185185
7	66684242	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0769231
7	66684257	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0714286
7	66684258	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66684283	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1
7	66684324	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0833333
7	66684337	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.3125
7	66684350	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.129032
7	66684842	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66684866	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0869565
7	66684897	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0740741
7	66685042	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0967742
7	66685048	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0666667
7	66685231	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0689655
7	66685234	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0740741
7	66685254	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.08
7	66685271	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.173913
7	66685421	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.04
7	66685440	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0229885
7	66686030	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0666667
7	66686094	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0645161
7	66686125	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66686995	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.272727
7	66686997	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.272727
7	66687291	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.153846
7	66695923	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66696208	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.272727
7	66701308	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66710910	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66739586	A->G	-	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.6
7	66741731	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.363636
7	66745512	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.1875
7	66745915	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66746404	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66754189	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.181818
7	66754209	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.363636
7	66761904	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.111111
7	66785619	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.666667
7	66785620	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.416667
7	66785625	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66785711	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66785753	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.416667
7	66785815	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.294118
7	66785826	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.235294
7	66786462	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.117647
7	66786665	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.208333
7	66786666	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66786898	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.307692
7	66787156	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0833333
7	66787166	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.166667
7	66787244	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.190476
7	66787248	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0869565
7	66787308	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66787485	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.133333
7	66787493	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.142857
7	66787505	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0869565
7	66787528	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.230769
7	66787550	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.129032
7	66787573	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.179487
7	66787606	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.0625
7	66787619	A->G	+	ENSG00000284461	AC027644.4	protein_coding	Intergenic	.	.	Alu	0.171429
7	66929983	A->G	+	ENSG00000106609	TMEM248	protein_coding	Intergenic	.	.	Alu	0.181818
7	66931074	A->G	+	ENSG00000106609	TMEM248	protein_coding	Intergenic	.	.	Alu	0.2
7	66931089	A->G	+	ENSG00000106609	TMEM248	protein_coding	Intergenic	.	.	Alu	0.2
7	70780559	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.363636
7	70781241	A->G	+	ENSG00000158321	AUTS2	protein_coding	Intergenic	.	.	Alu	0.153846
7	72834995	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	72834996	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
7	72920071	A->G	+	ENSG00000196313	POM121	protein_coding	Intergenic	.	.	Alu	0.375
7	73004643	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	73462013	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.125
7	73462017	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.130435
7	73462040	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.1
7	73462042	A->G	-	ENSG00000009954	BAZ1B	protein_coding	Intergenic	.	.	Alu	0.0952381
7	73538557	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.210526
7	73538579	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.176471
7	73538596	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.333333
7	73538597	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.2
7	73538689	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.133333
7	73538698	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.461538
7	73538701	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.230769
7	73539027	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.111111
7	73539058	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.157895
7	73539128	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.105263
7	73539349	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.166667
7	73539389	A->G	-	ENSG00000106635	BCL7B	protein_coding	Intergenic	.	.	Alu	0.176471
7	74178020	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.181818
7	74178124	A->G	+	ENSG00000106682	EIF4H	protein_coding	Intergenic	.	.	Alu	0.2
7	74218755	A->G	+	ENSG00000086730	LAT2	protein_coding	Intergenic	.	.	Alu	0.153846
7	74885599	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.333333
7	74885605	A->G	-	ENSG00000277072	STAG3L2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
7	75882392	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.105263
7	75882449	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.12
7	75882534	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.333333
7	75882568	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.189189
7	75882587	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.0588235
7	75883296	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.0909091
7	75883318	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.107143
7	75883328	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.321429
7	75883398	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.421053
7	75883404	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.294118
7	75884426	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.2
7	75884483	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.217391
7	75886637	A->G	+	ENSG00000005486	RHBDD2	protein_coding	Intergenic	.	.	Alu	0.25
7	87879169	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.153846
7	87888673	A->G	+	ENSG00000006634	DBF4	protein_coding	Intergenic	.	.	Alu	0.142857
7	97967799	A->G	-	ENSG00000284707	AC079781.5	processed_transcript	Intergenic	.	.	Alu	0.214286
7	97968618	A->G	-	ENSG00000284707	AC079781.5	processed_transcript	Intergenic	.	.	Alu	0.181818
7	97968671	A->G	-	ENSG00000284707	AC079781.5	processed_transcript	Intergenic	.	.	Alu	0.1875
7	97968678	A->G	-	ENSG00000284707	AC079781.5	processed_transcript	Intergenic	.	.	Alu	0.357143
7	97969268	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.230769
7	97969311	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
7	97969378	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.285714
7	97969379	A->G	-	ENSG00000243554	AC004967.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
7	99037833	A->G	-	ENSG00000196367	TRRAP	protein_coding	Intergenic	.	.	Alu	0.157895
7	99376820	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.117647
7	99378159	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.434783
7	99378160	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.26087
7	99378163	A->G	+	ENSG00000130429	ARPC1B	protein_coding	Intergenic	.	.	Alu	0.105263
7	99497236	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.7
7	99497430	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.117647
7	99497453	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.153846
7	99497619	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0571429
7	99497629	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.333333
7	99497672	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0555556
7	99497681	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.478261
7	99497684	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0606061
7	99497698	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.147059
7	99497701	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.117647
7	99497754	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.0434783
7	99497810	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.697674
7	99497848	A->G	-	ENSG00000160908	ZNF394	protein_coding	Intergenic	.	.	Alu	0.116279
7	99559466	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.222222
7	99560336	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.133333
7	99565443	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.153846
7	99566606	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.217391
7	99566611	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.105263
7	99566660	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.117647
7	99566690	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.0909091
7	99566789	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.0740741
7	99566807	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.133333
7	99568668	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.137931
7	99568719	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.0967742
7	99568720	A->G	+	ENSG00000197343	ZNF655	protein_coding	Intergenic	.	.	Alu	0.129032
8	11855409	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.375
8	11856397	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11857175	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.111111
8	11857249	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.357143
8	11857260	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.538462
8	11857264	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.357143
8	11858483	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11858486	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.166667
8	11858532	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.111111
8	11858540	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.111111
8	11858541	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.105263
8	11858562	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.294118
8	11863337	A->G	-	ENSG00000164733	CTSB	protein_coding	Intergenic	.	.	Alu	0.117647
8	22106235	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
8	22106249	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
8	22106307	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
8	22609426	A->G	+	ENSG00000158941	CCAR2	protein_coding	Intergenic	.	.	Alu	0.0952381
8	22632959	A->G	-	ENSG00000147439	BIN3	protein_coding	Intergenic	.	.	Alu	0.181818
8	22686208	A->G	-	.	.	.	Intergenic	.	.	Alu	0.8
8	23041308	A->G	-	ENSG00000120889	TNFRSF10B	protein_coding	Intergenic	.	.	Alu	0.3
8	23187465	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	23187474	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
8	23187485	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
8	23187530	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
8	23187531	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
8	23187591	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
8	23187627	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
8	23188285	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
8	23188297	A->G	-	.	.	.	Intergenic	.	.	Alu	0.119048
8	23188311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0535714
8	23188321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.22449
8	23188324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.196078
8	23188325	A->G	-	.	.	.	Intergenic	.	.	Alu	0.132075
8	23188340	A->G	-	.	.	.	Intergenic	.	.	Alu	0.177778
8	23188346	A->G	-	.	.	.	Intergenic	.	.	Alu	0.08
8	23188354	A->G	-	.	.	.	Intergenic	.	.	Alu	0.145833
8	23188392	A->G	-	.	.	.	Intergenic	.	.	Alu	0.156863
8	23188397	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0625
8	23188434	A->G	-	.	.	.	Intergenic	.	.	Alu	0.219512
8	23188444	A->G	-	.	.	.	Intergenic	.	.	Alu	0.409091
8	23188451	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0681818
8	23188500	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
8	23188508	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
8	23188522	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
8	23188571	A->G	-	.	.	.	Intergenic	.	.	Alu	0.866667
8	23188579	A->G	-	.	.	.	Intergenic	.	.	Alu	0.294118
8	23188596	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
8	23188610	A->G	-	.	.	.	Intergenic	.	.	Alu	0.222222
8	23188617	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
8	23188638	A->G	-	.	.	.	Intergenic	.	.	Alu	0.823529
8	23188641	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
8	23188804	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
8	23188805	A->G	-	.	.	.	Intergenic	.	.	Alu	0.428571
8	23188806	A->G	-	.	.	.	Intergenic	.	.	Alu	0.555556
8	23188810	A->G	-	.	.	.	Intergenic	.	.	Alu	0.259259
8	23188856	A->G	-	.	.	.	Intergenic	.	.	Alu	0.102564
8	23188887	A->G	-	.	.	.	Intergenic	.	.	Alu	0.075
8	23188892	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0930233
8	23188960	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
8	23189019	A->G	-	.	.	.	Intergenic	.	.	Alu	0.473684
8	23189046	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
8	23189062	A->G	-	.	.	.	Intergenic	.	.	Alu	0.135135
8	23189109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
8	26350190	A->G	+	ENSG00000221914	PPP2R2A	protein_coding	Intergenic	.	.	Alu	0.133333
8	30081530	A->G	-	ENSG00000133872	SARAF	protein_coding	Intergenic	.	.	Alu	1
8	30099336	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.133333
8	30112310	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	30112315	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	30112316	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	30113208	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.272727
8	30113220	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.25
8	30114344	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	30114395	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	30115183	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	30115185	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	30115186	A->G	+	ENSG00000104660	LEPROTL1	protein_coding	Intergenic	.	.	Alu	0.166667
8	30169909	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.133333
8	30169917	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.133333
8	30169964	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.1875
8	30173609	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.157895
8	30173623	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.117647
8	30173624	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.111111
8	30177570	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.181818
8	30177595	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.181818
8	30178208	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.285714
8	30178729	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.25
8	30178739	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.210526
8	30178759	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.15
8	30178762	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.210526
8	30178795	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.142857
8	30178798	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.333333
8	30178800	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.125
8	30178820	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.111111
8	30178825	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.166667
8	30178865	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.153846
8	30178885	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.142857
8	30178892	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.25
8	30178895	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.153846
8	30178896	A->G	+	ENSG00000104671	DCTN6	protein_coding	Intergenic	.	.	Alu	0.25
8	38140975	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.3
8	38141001	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.4
8	38141013	A->G	+	ENSG00000129691	ASH2L	protein_coding	Intergenic	.	.	Alu	0.307692
8	38216464	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	38217588	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
8	38905249	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.0606061
8	38905293	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38905315	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.243243
8	38905321	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38905324	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.242424
8	38905337	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.117647
8	38905415	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38905810	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.222222
8	38905814	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.142857
8	38905866	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.2
8	38907646	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.1
8	38907681	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.444444
8	38907883	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.115385
8	38907936	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.09375
8	38907958	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.0967742
8	38911417	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.0909091
8	38911418	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.130435
8	38911426	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.217391
8	38911472	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.25
8	38911499	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.136364
8	38911767	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.272727
8	38911777	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.142857
8	38911826	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.0909091
8	38911829	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.130435
8	38912139	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.111111
8	38912180	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.133333
8	38912229	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.0869565
8	38914978	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.125
8	38914995	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.125
8	38915117	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.3
8	38915118	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.166667
8	38915181	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.157895
8	38915198	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.1875
8	38915208	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.125
8	38941157	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.181818
8	38942220	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.230769
8	38942296	A->G	+	ENSG00000169499	PLEKHA2	protein_coding	Intergenic	.	.	Alu	0.142857
8	38994874	A->G	-	ENSG00000169490	TM2D2	protein_coding	Intergenic	.	.	Alu	0.466667
8	39021302	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.272727
8	39021338	A->G	+	ENSG00000168615	ADAM9	protein_coding	Intergenic	.	.	Alu	0.2
8	41616360	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.2
8	41616506	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.142857
8	41616517	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.153846
8	41617161	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.1875
8	41617186	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.230769
8	41617201	A->G	+	ENSG00000158669	GPAT4	protein_coding	Intergenic	.	.	Alu	0.181818
8	41966293	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.266667
8	41966296	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.4
8	42045928	A->G	-	ENSG00000083168	KAT6A	protein_coding	Intergenic	.	.	Alu	0.133333
8	42273641	A->G	+	ENSG00000104365	IKBKB	protein_coding	Intergenic	.	.	Alu	0.214286
8	42274234	A->G	+	ENSG00000104365	IKBKB	protein_coding	Intergenic	.	.	Alu	0.181818
8	42274277	A->G	+	ENSG00000104365	IKBKB	protein_coding	Intergenic	.	.	Alu	0.166667
8	42274282	A->G	+	ENSG00000104365	IKBKB	protein_coding	Intergenic	.	.	Alu	0.4
8	42274307	A->G	+	ENSG00000104365	IKBKB	protein_coding	Intergenic	.	.	Alu	0.153846
8	42357947	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.2
8	42357968	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.181818
8	42364429	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.1875
8	42364464	A->G	+	ENSG00000070501	POLB	protein_coding	Intergenic	.	.	Alu	0.0869565
8	42534291	A->G	-	ENSG00000168575	SLC20A2	protein_coding	Intergenic	.	.	Alu	0.1
8	43124600	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
8	43143753	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.1875
8	43144129	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.45
8	43144134	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.1875
8	43148940	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.3
8	43152064	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.166667
8	43152657	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.142857
8	43152725	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.272727
8	43162677	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.333333
8	43162681	A->G	+	ENSG00000165102	HGSNAT	protein_coding	Intergenic	.	.	Alu	0.3
8	51854612	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.166667
8	51854634	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.363636
8	51854649	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.166667
8	51854684	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.473684
8	51855905	A->G	-	ENSG00000168300	PCMTD1	protein_coding	Intergenic	.	.	Alu	0.2
8	53742526	A->G	-	ENSG00000047249	ATP6V1H	protein_coding	Intergenic	.	.	Alu	0.272727
8	58604804	A->G	-	ENSG00000035681	NSMAF	protein_coding	Intergenic	.	.	Alu	0.133333
8	60588258	A->G	+	ENSG00000104388	RAB2A	protein_coding	Intergenic	.	.	Alu	0.111111
8	65820334	A->G	-	ENSG00000205268	PDE7A	protein_coding	Intergenic	.	.	Alu	0.2
8	70114253	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.2
8	70123394	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.272727
8	70123435	A->G	-	ENSG00000140396	NCOA2	protein_coding	Intergenic	.	.	Alu	0.153846
8	73970201	A->G	-	ENSG00000154582	ELOC	protein_coding	Intergenic	.	.	Alu	0.153846
8	94258542	A->G	-	ENSG00000164949	GEM	protein_coding	Intergenic	.	.	Alu	0.346154
8	97728927	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	97729116	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
8	97729210	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0327869
8	97729701	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0344828
8	97729731	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
9	15504017	A->G	-	ENSG00000164985	PSIP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	26933991	A->G	-	ENSG00000137055	PLAA	protein_coding	Intergenic	.	.	Alu	0.2
9	33027703	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.272727
9	33035225	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	33037561	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intergenic	.	.	Alu	0.0740741
9	33308014	A->G	+	ENSG00000086102	NFX1	protein_coding	Intergenic	.	.	Alu	0.2
9	35047944	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	35049853	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
9	35050652	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
9	35050741	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
9	35696413	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
9	36159757	A->G	+	ENSG00000122694	GLIPR2	protein_coding	Intergenic	.	.	Alu	0.181818
9	36159790	A->G	+	ENSG00000122694	GLIPR2	protein_coding	Intergenic	.	.	Alu	0.2
9	36205889	A->G	+	ENSG00000122705	CLTA	protein_coding	Intergenic	.	.	Alu	0.153846
9	36205899	A->G	+	ENSG00000122705	CLTA	protein_coding	Intergenic	.	.	Alu	0.1875
9	36205942	A->G	+	ENSG00000122705	CLTA	protein_coding	Intergenic	.	.	Alu	0.157895
9	36205967	A->G	+	ENSG00000122705	CLTA	protein_coding	Intergenic	.	.	Alu	0.117647
9	36346316	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.5
9	36346410	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.5
9	36346418	A->G	-	ENSG00000137075	RNF38	protein_coding	Intergenic	.	.	Alu	0.2
9	37505575	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	37505576	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
9	41037894	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
9	41037895	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.272727
9	41038504	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
9	41038523	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
9	68972492	A->G	-	ENSG00000107242	PIP5K1B	protein_coding	Intergenic	.	.	Alu	0.0612245
9	68972581	A->G	-	ENSG00000107242	PIP5K1B	protein_coding	Intergenic	.	.	Alu	0.0714286
9	68972589	A->G	-	ENSG00000107242	PIP5K1B	protein_coding	Intergenic	.	.	Alu	0.117647
9	70304108	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.4
9	70304189	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0952381
9	70304491	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.142857
9	70304506	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.125
9	70304540	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.235294
9	70304652	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.181818
9	70304673	A->G	+	ENSG00000198887	SMC5	protein_coding	Intergenic	.	.	Alu	0.0833333
9	71687584	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.0714286
9	71687610	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.0869565
9	71687611	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.0869565
9	71687861	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.114286
9	71687964	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.142857
9	71706107	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.111111
9	71706146	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.128205
9	71706153	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.09375
9	71706973	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.0952381
9	71706998	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.1
9	71707032	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.133333
9	71707997	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.0869565
9	71708065	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.08
9	71728899	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.105263
9	71728924	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.111111
9	71728934	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.125
9	71728971	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.384615
9	71729532	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.153846
9	71729556	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.153846
9	71737003	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.125
9	71737638	A->G	-	ENSG00000135048	CEMIP2	protein_coding	Intergenic	.	.	Alu	0.105263
9	72361019	A->G	-	ENSG00000107372	ZFAND5	protein_coding	Intergenic	.	.	Alu	0.465116
9	75080605	A->G	-	ENSG00000106733	NMRK1	protein_coding	Intergenic	.	.	Alu	0.3
9	75080642	A->G	-	ENSG00000106733	NMRK1	protein_coding	Intergenic	.	.	Alu	0.4
9	76461828	A->G	+	ENSG00000187210	GCNT1	protein_coding	Intergenic	.	.	Alu	0.153846
9	83919677	A->G	-	ENSG00000165115	KIF27	protein_coding	Intergenic	.	.	Alu	0.111111
9	86025759	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	86025760	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
9	86266788	A->G	-	ENSG00000135070	ISCA1	protein_coding	Intergenic	.	.	Alu	0.115385
9	86266823	A->G	-	ENSG00000135070	ISCA1	protein_coding	Intergenic	.	.	Alu	0.105263
9	86266855	A->G	-	ENSG00000135070	ISCA1	protein_coding	Intergenic	.	.	Alu	0.0833333
9	86321989	A->G	-	ENSG00000083223	TUT7	protein_coding	Intergenic	.	.	Alu	0.181818
9	89389070	A->G	-	ENSG00000187764	SEMA4D	protein_coding	Intergenic	.	.	Alu	0.642857
9	90877162	A->G	+	ENSG00000165025	SYK	protein_coding	Intergenic	.	.	Alu	0.153846
9	90877227	A->G	+	ENSG00000165025	SYK	protein_coding	Intergenic	.	.	Alu	0.181818
9	90877278	A->G	+	ENSG00000165025	SYK	protein_coding	Intergenic	.	.	Alu	0.5
9	91292407	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.181818
9	91294314	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.117647
9	91294382	A->G	-	ENSG00000148090	AUH	protein_coding	Intergenic	.	.	Alu	0.181818
9	92635739	A->G	-	ENSG00000127080	IPPK	protein_coding	Intergenic	.	.	Alu	0.2
9	92635740	A->G	-	ENSG00000127080	IPPK	protein_coding	Intergenic	.	.	Alu	0.2
9	92840401	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1875
9	92840418	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
9	92840461	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.227273
9	92840470	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.117647
9	92840504	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.545455
9	92840523	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
9	92840529	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
9	92840539	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
9	92842339	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
9	92842469	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.111111
9	92843209	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
9	92843232	A->G	-	ENSG00000187984	ANKRD19P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
9	93444711	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
9	97631326	A->G	-	ENSG00000136925	TSTD2	protein_coding	Intergenic	.	.	Alu	0.363636
9	97631842	A->G	-	ENSG00000136925	TSTD2	protein_coding	Intergenic	.	.	Alu	0.181818
9	97656348	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.363636
9	97656456	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.333333
9	97656459	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.6
9	97657173	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	1
9	97663988	A->G	+	ENSG00000136937	NCBP1	protein_coding	Intergenic	.	.	Alu	0.181818
9	97899833	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	97903173	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
9	97903211	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
9	97903227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
9	97908023	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.105263
9	97908062	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.166667
9	97908156	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.166667
9	97908223	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.4375
9	97908503	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.181818
9	97909066	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.2
9	97909146	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.166667
9	97909155	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.2
9	97909224	A->G	-	ENSG00000136932	TRMO	protein_coding	Intergenic	.	.	Alu	0.166667
9	98061996	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.142857
9	98068746	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.4
9	98068766	A->G	+	ENSG00000095380	NANS	protein_coding	Intergenic	.	.	Alu	0.4
9	98110761	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.2
9	98111405	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.3
9	98111406	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.2
9	98111479	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.176471
9	98116619	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.25
9	98116620	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.166667
9	98118021	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.3
9	98118371	A->G	-	ENSG00000106785	TRIM14	protein_coding	Intergenic	.	.	Alu	0.6
9	99847953	A->G	+	ENSG00000119508	NR4A3	protein_coding	Intergenic	.	.	Alu	0.0909091
10	14582649	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.1875
10	14582658	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.214286
10	14582820	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.2
10	14582821	A->G	-	ENSG00000065809	FAM107B	protein_coding	Intergenic	.	.	Alu	0.3
10	14905726	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.153846
10	14905819	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.4
10	14905860	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.230769
10	14905870	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.416667
10	14905882	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.153846
10	14905899	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	14905980	A->G	-	ENSG00000152457	DCLRE1C	protein_coding	Intergenic	.	.	Alu	0.454545
10	15107643	A->G	-	ENSG00000152464	RPP38	protein_coding	Intergenic	.	.	Alu	0.166667
10	17217016	A->G	-	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.3
10	17217086	A->G	-	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.4
10	17217402	A->G	-	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.4
10	17217403	A->G	-	ENSG00000229124	VIM-AS1	antisense	Intergenic	.	.	Alu	0.4
10	17686430	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.097561
10	17686446	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.769231
10	17686454	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.190476
10	17686476	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.368421
10	17686477	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.342105
10	17686516	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.6875
10	17686551	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.4
10	17686557	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.227273
10	17686574	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.45
10	17686577	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.142857
10	17686589	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.2
10	17686594	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.107143
10	17686624	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.12
10	17686639	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.172414
10	17686651	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.96
10	17686653	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.111111
10	17687430	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.0588235
10	17687492	A->G	+	ENSG00000136738	STAM	protein_coding	Intergenic	.	.	Alu	0.030303
10	19846795	A->G	+	ENSG00000120594	PLXDC2	protein_coding	Intergenic	.	.	Alu	0.272727
10	26760627	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.391304
10	26760645	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.35
10	26760707	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.3
10	26760724	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.733333
10	26760727	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.15
10	26760766	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.35
10	26760790	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.263158
10	26760827	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.130435
10	26760867	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.25
10	26760951	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.117647
10	26760955	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.117647
10	26760959	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.176471
10	26760960	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.117647
10	26761035	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.105263
10	26761051	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.142857
10	26761067	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.625
10	26761081	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.15
10	26761083	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.7
10	26761107	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0689655
10	26761121	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0625
10	26761124	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.1
10	26761141	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.78125
10	26761190	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.111111
10	26761195	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.0740741
10	26761217	A->G	-	ENSG00000136754	ABI1	protein_coding	Intergenic	.	.	Alu	0.6
10	27115131	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.4
10	27126192	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.1
10	27126277	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.25
10	27140678	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.0909091
10	27141233	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.142857
10	27143187	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.181818
10	27150000	A->G	-	ENSG00000136758	YME1L1	protein_coding	Intergenic	.	.	Alu	0.142857
10	28525793	A->G	-	ENSG00000254635	WAC-AS1	antisense	Intergenic	.	.	Alu	0.217391
10	28613021	A->G	+	ENSG00000095787	WAC	protein_coding	Intergenic	.	.	Alu	0.125
10	30439688	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0322581
10	30439764	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0275229
10	30439766	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0530973
10	30446079	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.1
10	30446102	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0512821
10	30446131	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.105263
10	30446153	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0857143
10	30446154	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.142857
10	30446293	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.258065
10	30452349	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.166667
10	30452815	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0952381
10	30452821	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.173913
10	30457722	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.0869565
10	30457725	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.08
10	30457746	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.12
10	30457764	A->G	+	ENSG00000107968	MAP3K8	protein_coding	Intergenic	.	.	Alu	0.222222
10	31337864	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.153846
10	31384244	A->G	+	ENSG00000148516	ZEB1	protein_coding	Intergenic	.	.	Alu	0.125
10	35126204	A->G	-	ENSG00000230534	AL392046.1	antisense	Intergenic	.	.	Alu	0.166667
10	35197064	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0392157
10	35197592	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.210526
10	35197594	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.105263
10	35198403	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.178571
10	35198412	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0833333
10	35198430	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.08
10	35202508	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0487805
10	35202530	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0425532
10	35203113	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.246753
10	35203201	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0350877
10	35203246	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0701754
10	35203293	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0701754
10	35203307	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0555556
10	35203308	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.145455
10	35203309	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.314815
10	35203508	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0425532
10	35203527	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0408163
10	35203531	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.037037
10	35203541	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0384615
10	35203545	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.208333
10	35203571	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0666667
10	35204368	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0392157
10	35204398	A->G	+	ENSG00000095794	CREM	protein_coding	Intergenic	.	.	Alu	0.0357143
10	35354369	A->G	+	ENSG00000108100	CCNY	protein_coding	Intergenic	.	.	Alu	0.181818
10	38021494	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.2
10	38027454	A->G	+	ENSG00000189180	ZNF33A	protein_coding	Intergenic	.	.	Alu	0.166667
10	45386180	A->G	+	ENSG00000012779	ALOX5	protein_coding	Intergenic	.	.	Alu	0.166667
10	45728153	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.142857
10	45728303	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.142857
10	45728306	A->G	+	ENSG00000172661	WASHC2C	protein_coding	Intergenic	.	.	Alu	0.142857
10	50068811	A->G	+	ENSG00000099290	WASHC2A	protein_coding	Intergenic	.	.	Alu	0.166667
10	51693042	A->G	-	ENSG00000185532	PRKG1	protein_coding	Intergenic	.	.	Alu	0.2
10	63191376	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.153846
10	63204063	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0666667
10	63205906	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.108696
10	63236869	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.181818
10	63249829	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.166667
10	63260675	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.105263
10	63260820	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.222222
10	63261332	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.107143
10	63261335	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.107143
10	63261468	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0909091
10	63261469	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0909091
10	63261498	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0666667
10	63261499	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.0666667
10	63261529	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.125
10	63261537	A->G	-	ENSG00000171988	JMJD1C	protein_coding	Intergenic	.	.	Alu	0.09375
10	67886126	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.105263
10	67886128	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.111111
10	67886140	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67886338	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.230769
10	67886411	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.4
10	67886428	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.09375
10	67886497	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.15625
10	67890195	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.133333
10	67890258	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.1875
10	67890511	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.107143
10	67890606	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.117647
10	67890612	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.125
10	67890625	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.117647
10	67890626	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.235294
10	67892381	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.176471
10	67892446	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.428571
10	67892702	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67893745	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.176471
10	67894948	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.533333
10	67894957	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.142857
10	67894958	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.285714
10	67895348	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.277778
10	67895816	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.2
10	67896534	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67896970	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.0967742
10	67897504	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.235294
10	67897678	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.142857
10	67897732	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.181818
10	67898184	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.166667
10	67900246	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.272727
10	67901262	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.105263
10	67903195	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.125
10	67903227	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.15
10	67903594	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.3125
10	67903648	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.1875
10	67904372	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.153846
10	67904724	A->G	+	ENSG00000096717	SIRT1	protein_coding	Intergenic	.	.	Alu	0.3
10	68758264	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.3
10	68758275	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.111111
10	68758289	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.117647
10	68758290	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.117647
10	68759141	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.6
10	68759725	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.117647
10	68759731	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.142857
10	68759976	A->G	+	ENSG00000060339	CCAR1	protein_coding	Intergenic	.	.	Alu	0.4
10	68974857	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.2
10	68977040	A->G	+	ENSG00000165732	DDX21	protein_coding	Intergenic	.	.	Alu	0.153846
10	69094689	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0652174
10	69099330	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.172414
10	69099375	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.138462
10	69099418	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.117647
10	69099426	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0555556
10	69099439	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0769231
10	69099514	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0566038
10	69099567	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0625
10	69099888	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0277778
10	69099889	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0416667
10	69100056	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0869565
10	69100074	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.037037
10	69100098	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.206349
10	69100099	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.171875
10	69100175	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0363636
10	69101201	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0444444
10	69102004	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.0625
10	69103213	A->G	+	ENSG00000122862	SRGN	protein_coding	Intergenic	.	.	Alu	0.25
10	69196228	A->G	+	ENSG00000156502	SUPV3L1	protein_coding	Intergenic	.	.	Alu	0.3
10	69381819	A->G	+	ENSG00000156515	HK1	protein_coding	Intergenic	.	.	Alu	0.25
10	70166948	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.157895
10	70167540	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.0869565
10	70168509	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.0816327
10	70168532	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.0851064
10	70168923	A->G	-	ENSG00000079332	SAR1A	protein_coding	Intergenic	.	.	Alu	0.125
10	71758771	A->G	-	ENSG00000107738	VSIR	protein_coding	Intergenic	.	.	Alu	0.25
10	71849501	A->G	-	ENSG00000197746	PSAP	protein_coding	Intergenic	.	.	Alu	0.08
10	72296996	A->G	-	.	.	.	Intergenic	.	.	Alu	0.103448
10	72339458	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.416667
10	72339471	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.142857
10	72339752	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.117647
10	72339756	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.210526
10	72339771	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.0833333
10	72339797	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.0909091
10	72339806	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.454545
10	72339810	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.0952381
10	72339819	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.105263
10	72339834	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.117647
10	72340110	A->G	-	ENSG00000148719	DNAJB12	protein_coding	Intergenic	.	.	Alu	0.157895
10	73755090	A->G	+	ENSG00000176986	SEC24C	protein_coding	Intergenic	.	.	Alu	0.181818
10	73776303	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0571429
10	73776318	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0625
10	73776340	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0606061
10	73776354	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.21875
10	73776414	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.307692
10	73776428	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.105263
10	73776436	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.789474
10	73776437	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.315789
10	73776443	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0952381
10	73776478	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.111111
10	73776482	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.15
10	73776527	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.272727
10	73776744	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.416667
10	73776780	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.571429
10	73776819	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.5
10	73776825	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.454545
10	73776846	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.1875
10	73776864	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.117647
10	73776940	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0697674
10	73776953	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.346939
10	73777619	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0769231
10	73777672	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0689655
10	73777681	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0540541
10	73777684	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.105263
10	73777735	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0857143
10	73777738	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0882353
10	73777817	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.0714286
10	73777908	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.3
10	73777934	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.08
10	73778376	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.3
10	73778381	A->G	+	ENSG00000196968	FUT11	protein_coding	Intergenic	.	.	Alu	0.363636
10	73804997	A->G	-	ENSG00000272916	AC022400.7	protein_coding	Intergenic	.	.	Alu	0.2
10	73805022	A->G	-	ENSG00000272916	AC022400.7	protein_coding	Intergenic	.	.	Alu	0.2
10	73805414	A->G	-	ENSG00000272916	AC022400.7	protein_coding	Intergenic	.	.	Alu	0.3
10	73805431	A->G	-	ENSG00000272916	AC022400.7	protein_coding	Intergenic	.	.	Alu	0.272727
10	73805483	A->G	-	ENSG00000272916	AC022400.7	protein_coding	Intergenic	.	.	Alu	0.4
10	73805508	A->G	-	ENSG00000272916	AC022400.7	protein_coding	Intergenic	.	.	Alu	0.416667
10	79280253	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.142857
10	79280298	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.153846
10	79302942	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.181818
10	79303003	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.333333
10	79303289	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.125
10	79303347	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.296296
10	79303350	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.185185
10	79303375	A->G	+	ENSG00000108175	ZMIZ1	protein_coding	Intergenic	.	.	Alu	0.0952381
10	80150069	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
10	80199571	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.230769
10	80199623	A->G	-	ENSG00000122359	ANXA11	protein_coding	Intergenic	.	.	Alu	0.166667
10	84351349	A->G	+	ENSG00000107771	CCSER2	protein_coding	Intergenic	.	.	Alu	0.2
10	84376074	A->G	+	ENSG00000107771	CCSER2	protein_coding	Intergenic	.	.	Alu	0.6875
10	87097329	A->G	+	ENSG00000122376	SHLD2	protein_coding	Intergenic	.	.	Alu	0.272727
10	87871764	A->G	+	ENSG00000171862	PTEN	protein_coding	Intergenic	.	.	Alu	0.2
10	88772868	A->G	+	ENSG00000204020	LIPN	protein_coding	Intergenic	.	.	Alu	0.0638298
10	89721580	A->G	+	ENSG00000138182	KIF20B	protein_coding	Intergenic	.	.	Alu	0.272727
10	91803359	A->G	+	ENSG00000107854	TNKS2	protein_coding	Intergenic	.	.	Alu	0.117647
10	91942163	A->G	+	ENSG00000095564	BTAF1	protein_coding	Intergenic	.	.	Alu	0.2
10	96537737	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.272727
10	96537749	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.3
10	96564240	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.181818
10	96580326	A->G	-	ENSG00000077147	TM9SF3	protein_coding	Intergenic	.	.	Alu	0.0909091
10	97322745	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
10	97364609	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97374204	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.25
10	97374205	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.125
10	97374212	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.8125
10	97374227	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97374235	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.142857
10	97374306	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.333333
10	97374338	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.375
10	97374339	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.3125
10	97375347	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.166667
10	97375350	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.5
10	97375376	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.25
10	97375938	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.153846
10	97376462	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.222222
10	97377477	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97377485	A->G	-	ENSG00000052749	RRP12	protein_coding	Intergenic	.	.	Alu	0.2
10	97429893	A->G	+	ENSG00000171314	PGAM1	protein_coding	Intergenic	.	.	Alu	0.2
10	97429894	A->G	+	ENSG00000171314	PGAM1	protein_coding	Intergenic	.	.	Alu	0.2
10	97668466	A->G	-	ENSG00000249967	AL355315.1	protein_coding	Intergenic	.	.	Alu	0.166667
10	97668478	A->G	-	ENSG00000249967	AL355315.1	protein_coding	Intergenic	.	.	Alu	0.166667
10	97668483	A->G	-	ENSG00000249967	AL355315.1	protein_coding	Intergenic	.	.	Alu	0.181818
10	97668492	A->G	-	ENSG00000249967	AL355315.1	protein_coding	Intergenic	.	.	Alu	0.153846
10	97668576	A->G	-	ENSG00000249967	AL355315.1	protein_coding	Intergenic	.	.	Alu	0.166667
10	97669045	A->G	-	ENSG00000249967	AL355315.1	protein_coding	Intergenic	.	.	Alu	0.105263
10	97671425	A->G	-	ENSG00000249967	AL355315.1	protein_coding	Intergenic	.	.	Alu	0.105263
10	98239931	A->G	+	ENSG00000166024	R3HCC1L	protein_coding	Intergenic	.	.	Alu	0.454545
11	11893530	A->G	+	ENSG00000170242	USP47	protein_coding	Intergenic	.	.	Alu	0.4
11	13703219	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.166667
11	13703247	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.111111
11	13703258	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.190476
11	13703323	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.166667
11	13703331	A->G	+	ENSG00000197601	FAR1	protein_coding	Intergenic	.	.	Alu	0.181818
11	14477650	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.0606061
11	14478725	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.111111
11	14478731	A->G	-	ENSG00000129083	COPB1	protein_coding	Intergenic	.	.	Alu	0.28
11	14516297	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.3
11	14516405	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.3
11	14516428	A->G	-	ENSG00000256206	AC018523.2	protein_coding	Intergenic	.	.	Alu	0.153846
11	14605486	A->G	-	ENSG00000129084	PSMA1	protein_coding	Intergenic	.	.	Alu	0.1875
11	14650304	A->G	+	ENSG00000152270	PDE3B	protein_coding	Intergenic	.	.	Alu	0.0465116
11	16740693	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0645161
11	16756369	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.2
11	16756370	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.2
11	16756529	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.366667
11	16756543	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.0512821
11	16756653	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.24
11	16756695	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.142857
11	16756761	A->G	+	ENSG00000110696	C11orf58	protein_coding	Intergenic	.	.	Alu	0.4
11	17076645	A->G	-	ENSG00000110700	RPS13	protein_coding	Intergenic	.	.	Alu	0.0465116
11	17355317	A->G	+	ENSG00000188211	NCR3LG1	protein_coding	Intergenic	.	.	Alu	0.166667
11	17355351	A->G	+	ENSG00000188211	NCR3LG1	protein_coding	Intergenic	.	.	Alu	0.133333
11	18333705	A->G	+	ENSG00000110768	GTF2H1	protein_coding	Intergenic	.	.	Alu	0.0465116
11	18397793	A->G	+	ENSG00000134333	LDHA	protein_coding	Intergenic	.	.	Alu	0.0454545
11	18404011	A->G	+	ENSG00000134333	LDHA	protein_coding	Intergenic	.	.	Alu	0.111111
11	18404097	A->G	+	ENSG00000134333	LDHA	protein_coding	Intergenic	.	.	Alu	0.0869565
11	18404244	A->G	+	ENSG00000134333	LDHA	protein_coding	Intergenic	.	.	Alu	0.0810811
11	18406539	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.0666667
11	18406605	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.16129
11	18406631	A->G	+	ENSG00000256006	AC084117.1	sense_intronic	Intergenic	.	.	Alu	0.0833333
11	18506436	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.166667
11	18507986	A->G	-	ENSG00000256588	AC027544.2	sense_intronic	Intergenic	.	.	Alu	0.166667
11	18512282	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.2
11	18514024	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.166667
11	18520388	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.176471
11	18520421	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.125
11	18520763	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.666667
11	18525301	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.125
11	18525303	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.117647
11	18525342	A->G	-	ENSG00000074319	TSG101	protein_coding	Intergenic	.	.	Alu	0.307692
11	33075484	A->G	+	ENSG00000176148	TCP11L1	protein_coding	Intergenic	.	.	Alu	0.333333
11	33756803	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.222222
11	33757840	A->G	-	ENSG00000110429	FBXO3	protein_coding	Intergenic	.	.	Alu	0.5
11	34076808	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.272727
11	34076810	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.153846
11	34076874	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.5
11	34076876	A->G	+	ENSG00000135387	CAPRIN1	protein_coding	Intergenic	.	.	Alu	0.125
11	35187018	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0769231
11	35187023	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0714286
11	35187137	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0833333
11	35187939	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0576923
11	35187940	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0754717
11	35187943	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0588235
11	35187944	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.0588235
11	35212453	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.0571429
11	35212491	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.0714286
11	35212863	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.117647
11	35212877	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.333333
11	35212924	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.142857
11	35212941	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.454545
11	35213553	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.375
11	35213562	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.15
11	35213577	A->G	+	ENSG00000255443	CD44-AS1	antisense	Intergenic	.	.	Alu	0.115385
11	35216773	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.114286
11	35218722	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.214286
11	35218723	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.285714
11	35226802	A->G	+	ENSG00000026508	CD44	protein_coding	Intergenic	.	.	Alu	0.15
11	36486136	A->G	-	.	.	.	Intergenic	.	.	Alu	0.785714
11	36486137	A->G	-	.	.	.	Intergenic	.	.	Alu	0.266667
11	36486227	A->G	-	.	.	.	Intergenic	.	.	Alu	0.307692
11	36486241	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
11	36486270	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
11	36486311	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
11	36486314	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	36486832	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
11	36486844	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
11	36486897	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
11	36486904	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
11	36486991	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
11	36487008	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
11	36487009	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
11	43318068	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.2
11	43324201	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.0909091
11	43324494	A->G	+	ENSG00000166181	API5	protein_coding	Intergenic	.	.	Alu	0.1
11	44589136	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.5
11	44589201	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.133333
11	44613726	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.272727
11	44613783	A->G	+	ENSG00000085117	CD82	protein_coding	Intergenic	.	.	Alu	0.25
11	45912857	A->G	-	ENSG00000121680	PEX16	protein_coding	Intergenic	.	.	Alu	0.25
11	46619631	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.2
11	46620369	A->G	+	ENSG00000175224	ATG13	protein_coding	Intergenic	.	.	Alu	0.153846
11	47168588	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.2
11	47168597	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.3
11	47168659	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.454545
11	47168687	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
11	47168697	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.25
11	47168705	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.125
11	47168795	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.214286
11	47168798	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.25
11	47168818	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.15
11	47169124	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.75
11	47169214	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.272727
11	47169701	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0571429
11	47169709	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0714286
11	47169763	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.1
11	47169766	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.171429
11	47169774	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.393939
11	47170145	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.105263
11	47170159	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.157895
11	47170200	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.1
11	47170202	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.166667
11	47170238	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.111111
11	47170241	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.125
11	47170262	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.352941
11	47170272	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.1875
11	47170466	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0714286
11	47170798	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0769231
11	47170889	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0588235
11	47170894	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0645161
11	47170907	A->G	-	ENSG00000149182	ARFGAP2	protein_coding	Intergenic	.	.	Alu	0.0833333
11	47280019	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.307692
11	47287427	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.473684
11	47287431	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.526316
11	47287466	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.294118
11	47287510	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47287575	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0833333
11	47287607	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.125
11	47287671	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47287672	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0909091
11	47287678	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.0869565
11	47288156	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.695652
11	47319372	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.153846
11	47319401	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.4375
11	47319735	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.117647
11	47319736	A->G	+	ENSG00000110514	MADD	protein_coding	Intergenic	.	.	Alu	0.235294
11	47366709	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.214286
11	47373108	A->G	-	ENSG00000066336	SPI1	protein_coding	Intergenic	.	.	Alu	0.2
11	47582798	A->G	+	ENSG00000213619	NDUFS3	protein_coding	Intergenic	.	.	Alu	0.2
11	47582805	A->G	+	ENSG00000213619	NDUFS3	protein_coding	Intergenic	.	.	Alu	0.6
11	47739666	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.125
11	47739680	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.117647
11	47739681	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.117647
11	47740003	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.181818
11	47740198	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	47740293	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.181818
11	47740355	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.142857
11	47740635	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.307692
11	47740636	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.384615
11	47740666	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.272727
11	47741224	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.1875
11	47741310	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.105263
11	47741333	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.1875
11	47741369	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.153846
11	47741777	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.363636
11	47743482	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.0952381
11	47763219	A->G	-	ENSG00000109920	FNBP4	protein_coding	Intergenic	.	.	Alu	0.2
11	57558107	A->G	-	ENSG00000156587	UBE2L6	protein_coding	Intergenic	.	.	Alu	0.2
11	57558108	A->G	-	ENSG00000156587	UBE2L6	protein_coding	Intergenic	.	.	Alu	0.3
11	57670350	A->G	+	ENSG00000156599	ZDHHC5	protein_coding	Intergenic	.	.	Alu	0.125
11	57670351	A->G	+	ENSG00000156599	ZDHHC5	protein_coding	Intergenic	.	.	Alu	0.125
11	57670391	A->G	+	ENSG00000156599	ZDHHC5	protein_coding	Intergenic	.	.	Alu	0.166667
11	58569487	A->G	-	ENSG00000110031	LPXN	protein_coding	Intergenic	.	.	Alu	0.176471
11	58571174	A->G	-	ENSG00000110031	LPXN	protein_coding	Intergenic	.	.	Alu	0.2
11	60387660	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.294118
11	60387729	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.227273
11	60387790	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.111111
11	60388910	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.466667
11	60388912	A->G	+	ENSG00000166926	MS4A6E	protein_coding	Intergenic	.	.	Alu	0.2
11	60977684	A->G	+	ENSG00000013725	CD6	protein_coding	Intergenic	.	.	Alu	0.166667
11	60979566	A->G	+	ENSG00000013725	CD6	protein_coding	Intergenic	.	.	Alu	0.105263
11	60992651	A->G	+	ENSG00000013725	CD6	protein_coding	Intergenic	.	.	Alu	0.142857
11	60992681	A->G	+	ENSG00000013725	CD6	protein_coding	Intergenic	.	.	Alu	0.133333
11	60992707	A->G	+	ENSG00000013725	CD6	protein_coding	Intergenic	.	.	Alu	0.166667
11	60992708	A->G	+	ENSG00000013725	CD6	protein_coding	Intergenic	.	.	Alu	0.166667
11	61325226	A->G	-	ENSG00000167986	DDB1	protein_coding	Intergenic	.	.	Alu	0.142857
11	61364982	A->G	+	ENSG00000149483	TMEM138	protein_coding	Intergenic	.	.	Alu	0.3
11	61410351	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.363636
11	61410359	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.5
11	61410363	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.2
11	61412366	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.230769
11	61412379	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.181818
11	61412987	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.08
11	61412988	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.16
11	61412989	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.230769
11	61412990	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.0769231
11	61413031	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.117647
11	61413047	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.333333
11	61413124	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.5
11	61413143	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.181818
11	61413144	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.272727
11	61413200	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.153846
11	61413372	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.5
11	61413387	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.25
11	61413388	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.333333
11	61413389	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.333333
11	61413402	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.3
11	61413483	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.153846
11	61413487	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.153846
11	61428476	A->G	-	ENSG00000149532	CPSF7	protein_coding	Intergenic	.	.	Alu	0.181818
11	62644397	A->G	-	ENSG00000089597	GANAB	protein_coding	Intergenic	.	.	Alu	0.363636
11	62764759	A->G	+	ENSG00000168002	POLR2G	protein_coding	Intergenic	.	.	Alu	0.375
11	62793641	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.545455
11	62802589	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.214286
11	62802620	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.1875
11	62803134	A->G	-	ENSG00000162231	NXF1	protein_coding	Intergenic	.	.	Alu	0.166667
11	62817000	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62821151	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.08
11	62821159	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.263158
11	62821277	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.235294
11	62821943	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.214286
11	62821944	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.214286
11	62823684	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62823719	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.08
11	62823729	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0869565
11	62823774	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0740741
11	62828169	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62828253	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.117647
11	62828281	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.238095
11	62828289	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.157895
11	62828309	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.142857
11	62828312	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.777778
11	62828314	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.166667
11	62828492	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.2
11	62828562	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.142857
11	62828626	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.266667
11	62828664	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.181818
11	62828885	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.0869565
11	62829664	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.157895
11	62830282	A->G	-	ENSG00000162236	STX5	protein_coding	Intergenic	.	.	Alu	0.08
11	62838213	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.518519
11	62838238	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.0952381
11	62838290	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.222222
11	62838291	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.2
11	62838636	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.263158
11	62838658	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.545455
11	62838720	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.142857
11	62840072	A->G	-	ENSG00000133316	WDR74	protein_coding	Intergenic	.	.	Alu	0.0869565
11	62887644	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intergenic	.	.	Alu	0.142857
11	64307956	A->G	+	ENSG00000173153	ESRRA	protein_coding	Intergenic	.	.	Alu	0.153846
11	64307991	A->G	+	ENSG00000173153	ESRRA	protein_coding	Intergenic	.	.	Alu	0.333333
11	64307992	A->G	+	ENSG00000173153	ESRRA	protein_coding	Intergenic	.	.	Alu	0.5
11	64308072	A->G	+	ENSG00000173153	ESRRA	protein_coding	Intergenic	.	.	Alu	0.153846
11	64308092	A->G	+	ENSG00000173153	ESRRA	protein_coding	Intergenic	.	.	Alu	0.181818
11	64308127	A->G	+	ENSG00000173153	ESRRA	protein_coding	Intergenic	.	.	Alu	0.230769
11	64308135	A->G	+	ENSG00000173153	ESRRA	protein_coding	Intergenic	.	.	Alu	0.133333
11	64858293	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.111111
11	64858403	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.142857
11	64859473	A->G	-	ENSG00000110047	EHD1	protein_coding	Intergenic	.	.	Alu	0.105263
11	65102118	A->G	+	ENSG00000149823	VPS51	protein_coding	Intergenic	.	.	Alu	0.272727
11	65647971	A->G	+	ENSG00000213445	SIPA1	protein_coding	Intergenic	.	.	Alu	0.142857
11	65647972	A->G	+	ENSG00000213445	SIPA1	protein_coding	Intergenic	.	.	Alu	0.214286
11	65647989	A->G	+	ENSG00000213445	SIPA1	protein_coding	Intergenic	.	.	Alu	0.133333
11	65648739	A->G	+	ENSG00000213445	SIPA1	protein_coding	Intergenic	.	.	Alu	0.230769
11	65648748	A->G	+	ENSG00000213445	SIPA1	protein_coding	Intergenic	.	.	Alu	0.166667
11	65648778	A->G	+	ENSG00000213445	SIPA1	protein_coding	Intergenic	.	.	Alu	0.0645161
11	65660796	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0363636
11	65660874	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0769231
11	65660915	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.3
11	65660976	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.272727
11	65660982	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.15
11	65661103	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.272727
11	65661108	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.235294
11	65661127	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.375
11	65661192	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.65625
11	65661195	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.314286
11	65661199	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.181818
11	65661226	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0571429
11	65661230	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.0714286
11	65661291	A->G	-	ENSG00000173039	RELA	protein_coding	Intergenic	.	.	Alu	0.125
11	65774483	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0235294
11	65774488	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0232558
11	65898408	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.153846
11	65898741	A->G	-	ENSG00000175592	FOSL1	protein_coding	Intergenic	.	.	Alu	0.0869565
11	66630422	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.1
11	66630469	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66630497	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.142857
11	66631908	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66633403	A->G	+	ENSG00000248643	RBM14-RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66648734	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66649107	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.181818
11	66649146	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66649172	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.230769
11	66649470	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66650394	A->G	+	ENSG00000173933	RBM4	protein_coding	Intergenic	.	.	Alu	0.2
11	66841215	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.166667
11	66842002	A->G	-	ENSG00000173715	C11orf80	protein_coding	Intergenic	.	.	Alu	0.157895
11	67140087	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.3
11	67242725	A->G	+	ENSG00000173120	KDM2A	protein_coding	Intergenic	.	.	Alu	0.133333
11	67296896	A->G	+	ENSG00000172932	ANKRD13D	protein_coding	Intergenic	.	.	Alu	0.0425532
11	68045577	A->G	+	ENSG00000110719	TCIRG1	protein_coding	Intergenic	.	.	Alu	0.166667
11	68045680	A->G	+	ENSG00000110719	TCIRG1	protein_coding	Intergenic	.	.	Alu	0.241379
11	68055149	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68055188	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.272727
11	68055190	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.25
11	68055948	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68055964	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.181818
11	68056774	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.142857
11	68056792	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.142857
11	68056793	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.0909091
11	68057591	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.333333
11	68058070	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.125
11	68085391	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68087373	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.181818
11	68087468	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.3
11	68118341	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.142857
11	68120003	A->G	-	ENSG00000110721	CHKA	protein_coding	Intergenic	.	.	Alu	0.166667
11	68900357	A->G	-	ENSG00000197345	MRPL21	protein_coding	Intergenic	.	.	Alu	0.2
11	72715983	A->G	-	ENSG00000186635	ARAP1	protein_coding	Intergenic	.	.	Alu	0.153846
11	72735164	A->G	-	ENSG00000186635	ARAP1	protein_coding	Intergenic	.	.	Alu	0.111111
11	72735219	A->G	-	ENSG00000186635	ARAP1	protein_coding	Intergenic	.	.	Alu	0.266667
11	72735228	A->G	-	ENSG00000186635	ARAP1	protein_coding	Intergenic	.	.	Alu	0.333333
11	72809632	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	72810177	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	72811034	A->G	-	.	.	.	Intergenic	.	.	Alu	0.227273
11	72811239	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
11	72811600	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
11	72812188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
11	74966866	A->G	+	ENSG00000118363	SPCS2	protein_coding	Intergenic	.	.	Alu	0.1875
11	74966881	A->G	+	ENSG00000118363	SPCS2	protein_coding	Intergenic	.	.	Alu	0.166667
11	75401424	A->G	+	ENSG00000149273	RPS3	protein_coding	Intergenic	.	.	Alu	0.285714
11	76365522	A->G	-	ENSG00000137492	THAP12	protein_coding	Intergenic	.	.	Alu	0.3
11	77617891	A->G	-	ENSG00000074201	CLNS1A	protein_coding	Intergenic	.	.	Alu	0.166667
11	77992339	A->G	-	ENSG00000149262	INTS4	protein_coding	Intergenic	.	.	Alu	0.333333
11	83074669	A->G	+	ENSG00000255503	AP001767.3	lincRNA	Intergenic	.	.	Alu	0.166667
11	93805460	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intergenic	.	.	Alu	0.142857
11	95174576	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.6
11	95174595	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.181818
11	95175281	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.142857
11	95175295	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.125
11	95217421	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.1
11	95217468	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.153846
11	95217486	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.2
11	95224401	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.121212
11	95224795	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.0952381
11	95224803	A->G	-	ENSG00000149212	SESN3	protein_coding	Intergenic	.	.	Alu	0.170213
12	10121841	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.125
12	10127993	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.0833333
12	10128116	A->G	-	ENSG00000172243	CLEC7A	protein_coding	Intergenic	.	.	Alu	0.0740741
12	10161113	A->G	-	ENSG00000173391	OLR1	protein_coding	Intergenic	.	.	Alu	0.214286
12	10162752	A->G	-	ENSG00000173391	OLR1	protein_coding	Intergenic	.	.	Alu	0.2
12	10167357	A->G	-	ENSG00000173391	OLR1	protein_coding	Intergenic	.	.	Alu	0.133333
12	10168631	A->G	-	ENSG00000173391	OLR1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	10168632	A->G	-	ENSG00000173391	OLR1	protein_coding	Intergenic	.	.	Alu	0.0952381
12	10216109	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.119048
12	10216161	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.176471
12	10216208	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0285714
12	10216213	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0273973
12	10216260	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0285714
12	10216273	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0273973
12	10216291	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.025641
12	10216296	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0375
12	10216312	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0232558
12	10216633	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0566038
12	10216657	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.102041
12	10216706	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0526316
12	10216707	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0909091
12	10216714	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.160714
12	10216720	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0338983
12	10216774	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.222222
12	10217503	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0352941
12	10217507	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0315789
12	10217522	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0215054
12	10217590	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0588235
12	10219063	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.153846
12	10219064	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.307692
12	10219220	A->G	+	ENSG00000139112	GABARAPL1	protein_coding	Intergenic	.	.	Alu	0.0625
12	11833383	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.263158
12	11833624	A->G	+	ENSG00000139083	ETV6	protein_coding	Intergenic	.	.	Alu	0.214286
12	12360466	A->G	+	ENSG00000165714	BORCS5	protein_coding	Intergenic	.	.	Alu	0.181818
12	12360793	A->G	+	ENSG00000165714	BORCS5	protein_coding	Intergenic	.	.	Alu	0.230769
12	12360850	A->G	+	ENSG00000165714	BORCS5	protein_coding	Intergenic	.	.	Alu	0.214286
12	12363222	A->G	+	ENSG00000165714	BORCS5	protein_coding	Intergenic	.	.	Alu	0.166667
12	12365415	A->G	+	ENSG00000165714	BORCS5	protein_coding	Intergenic	.	.	Alu	0.166667
12	12365427	A->G	+	ENSG00000165714	BORCS5	protein_coding	Intergenic	.	.	Alu	0.181818
12	12437793	A->G	+	ENSG00000165714	BORCS5	protein_coding	Intergenic	.	.	Alu	0.454545
12	13207211	A->G	+	ENSG00000134531	EMP1	protein_coding	Intergenic	.	.	Alu	0.266667
12	13207212	A->G	+	ENSG00000134531	EMP1	protein_coding	Intergenic	.	.	Alu	0.133333
12	14955586	A->G	-	ENSG00000111348	ARHGDIB	protein_coding	Intergenic	.	.	Alu	0.142857
12	14959162	A->G	-	ENSG00000111348	ARHGDIB	protein_coding	Intergenic	.	.	Alu	0.05
12	14959198	A->G	-	ENSG00000111348	ARHGDIB	protein_coding	Intergenic	.	.	Alu	0.0967742
12	14959201	A->G	-	ENSG00000111348	ARHGDIB	protein_coding	Intergenic	.	.	Alu	0.0810811
12	14960740	A->G	-	ENSG00000111348	ARHGDIB	protein_coding	Intergenic	.	.	Alu	0.125
12	25221329	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.272727
12	25248111	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.153846
12	25248226	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.7
12	25248227	A->G	-	ENSG00000133703	KRAS	protein_coding	Intergenic	.	.	Alu	0.2
12	27034559	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.2
12	27034701	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.2
12	27034702	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.3
12	27034703	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.3
12	27034965	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.818182
12	27035013	A->G	+	ENSG00000152944	MED21	protein_coding	Intergenic	.	.	Alu	0.272727
12	27313603	A->G	+	ENSG00000211455	STK38L	protein_coding	Intergenic	.	.	Alu	0.2
12	27313635	A->G	+	ENSG00000211455	STK38L	protein_coding	Intergenic	.	.	Alu	0.166667
12	31988968	A->G	+	ENSG00000174718	KIAA1551	protein_coding	Intergenic	.	.	Alu	0.363636
12	31993212	A->G	+	.	.	.	Intergenic	.	.	Alu	0.722222
12	31993213	A->G	+	.	.	.	Intergenic	.	.	Alu	0.388889
12	31993250	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
12	31993413	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31993424	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31993666	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
12	31993696	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
12	31994191	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
12	31994206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
12	31994269	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
12	31994389	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
12	31994395	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
12	31994398	A->G	+	.	.	.	Intergenic	.	.	Alu	0.148148
12	31994412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
12	31994415	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
12	31994447	A->G	+	.	.	.	Intergenic	.	.	Alu	0.12
12	31994455	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
12	31994468	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
12	31994477	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31994478	A->G	+	.	.	.	Intergenic	.	.	Alu	0.533333
12	31994490	A->G	+	.	.	.	Intergenic	.	.	Alu	0.121212
12	31994558	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
12	31994565	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	31994577	A->G	+	.	.	.	Intergenic	.	.	Alu	0.193548
12	31994603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
12	31994607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
12	31994630	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
12	31994642	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
12	31994938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
12	31994954	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
12	31994994	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
12	31995241	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
12	31995246	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31995281	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
12	31995509	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
12	31995558	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
12	31995559	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
12	31995572	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31995634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
12	31996557	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31996587	A->G	+	.	.	.	Intergenic	.	.	Alu	0.26087
12	31996618	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
12	31996621	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
12	31996630	A->G	+	.	.	.	Intergenic	.	.	Alu	0.277778
12	31996647	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
12	31996655	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31996657	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
12	31996807	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
12	31996861	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
12	31996866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
12	31996885	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
12	31996892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
12	31996896	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
12	31997195	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
12	31997196	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
12	31997210	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
12	31997251	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
12	31997254	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
12	31997361	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
12	31997381	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
12	31997416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
12	31997811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
12	31997831	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
12	31997838	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
12	31997860	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31997876	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
12	31997883	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31997885	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31997886	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
12	31997889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
12	31997915	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
12	31997916	A->G	+	.	.	.	Intergenic	.	.	Alu	0.227273
12	31997925	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
12	31998251	A->G	+	.	.	.	Intergenic	.	.	Alu	0.192308
12	31998281	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31998291	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31998292	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
12	31998305	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
12	31998419	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
12	31998442	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
12	31998479	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
12	31998502	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
12	31998503	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
12	31998513	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
12	31998569	A->G	+	.	.	.	Intergenic	.	.	Alu	0.285714
12	31998605	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
12	31998610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
12	31998611	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
12	31998615	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
12	31998650	A->G	+	.	.	.	Intergenic	.	.	Alu	0.294118
12	31998668	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
12	31999206	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
12	31999307	A->G	+	.	.	.	Intergenic	.	.	Alu	0.318182
12	31999334	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
12	31999668	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
12	31999727	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
12	31999769	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
12	31999770	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
12	31999774	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
12	31999782	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
12	31999787	A->G	+	.	.	.	Intergenic	.	.	Alu	0.416667
12	31999809	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
12	32000013	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
12	32000019	A->G	+	.	.	.	Intergenic	.	.	Alu	0.461538
12	32000049	A->G	+	.	.	.	Intergenic	.	.	Alu	0.818182
12	32000091	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
12	32000157	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
12	42222337	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.363636
12	42222450	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.25
12	42222456	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.333333
12	42224716	A->G	-	ENSG00000015153	YAF2	protein_coding	Intergenic	.	.	Alu	0.230769
12	43800891	A->G	-	ENSG00000151239	TWF1	protein_coding	Intergenic	.	.	Alu	0.125
12	45959254	A->G	-	ENSG00000139218	SCAF11	protein_coding	Intergenic	.	.	Alu	0.142857
12	47214590	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intergenic	.	.	Alu	0.173913
12	47215322	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intergenic	.	.	Alu	0.153846
12	47215932	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intergenic	.	.	Alu	0.133333
12	47215942	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intergenic	.	.	Alu	0.1
12	47215970	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intergenic	.	.	Alu	0.0740741
12	47217271	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	47217294	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	47217363	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	47217851	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.222222
12	47218768	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.272727
12	47218921	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.272727
12	47220008	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.230769
12	47220018	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	47220271	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.2
12	47221873	A->G	+	ENSG00000179715	PCED1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	47258484	A->G	+	ENSG00000257925	AC008083.1	antisense	Intergenic	.	.	Alu	0.133333
12	47258513	A->G	+	ENSG00000257925	AC008083.1	antisense	Intergenic	.	.	Alu	0.277778
12	47260667	A->G	+	ENSG00000257925	AC008083.1	antisense	Intergenic	.	.	Alu	0.2
12	47262034	A->G	+	ENSG00000257925	AC008083.1	antisense	Intergenic	.	.	Alu	0.4
12	47262070	A->G	+	ENSG00000257925	AC008083.1	antisense	Intergenic	.	.	Alu	0.2
12	47854214	A->G	-	ENSG00000111424	VDR	protein_coding	Intergenic	.	.	Alu	0.2
12	47866878	A->G	-	ENSG00000111424	VDR	protein_coding	Intergenic	.	.	Alu	0.181818
12	47869851	A->G	-	ENSG00000111424	VDR	protein_coding	Intergenic	.	.	Alu	0.181818
12	48658013	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.272727
12	48658059	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.5
12	48658119	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	48658122	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	48664119	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	48665962	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0769231
12	48665978	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	48666114	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0869565
12	48666119	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.12
12	48667192	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0666667
12	48667199	A->G	-	ENSG00000139620	KANSL2	protein_coding	Intergenic	.	.	Alu	0.0555556
12	48696925	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.266667
12	48696971	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.125
12	48696994	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.222222
12	48697013	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.125
12	48697016	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.208333
12	48697046	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.3125
12	48697263	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.166667
12	48697315	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.125
12	48697316	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.0833333
12	48697317	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.26087
12	48697354	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.1
12	48697631	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.444444
12	48697639	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.111111
12	48697653	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.294118
12	48697656	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.277778
12	48697703	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.2
12	48702765	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.272727
12	48713307	A->G	-	ENSG00000129315	CCNT1	protein_coding	Intergenic	.	.	Alu	0.111111
12	53022948	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.0869565
12	53023835	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.153846
12	53024919	A->G	+	ENSG00000063046	EIF4B	protein_coding	Intergenic	.	.	Alu	0.181818
12	53177571	A->G	-	ENSG00000139631	CSAD	protein_coding	Intergenic	.	.	Alu	0.5
12	53177577	A->G	-	ENSG00000139631	CSAD	protein_coding	Intergenic	.	.	Alu	0.4
12	53178406	A->G	-	ENSG00000139631	CSAD	protein_coding	Intergenic	.	.	Alu	0.2
12	53470505	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.363636
12	53470629	A->G	+	ENSG00000197111	PCBP2	protein_coding	Intergenic	.	.	Alu	0.2
12	54414841	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.138889
12	54416155	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.0357143
12	54416207	A->G	-	ENSG00000161638	ITGA5	protein_coding	Intergenic	.	.	Alu	0.0666667
12	55778209	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.272727
12	55778419	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.181818
12	55783920	A->G	-	ENSG00000205323	SARNP	protein_coding	Intergenic	.	.	Alu	0.166667
12	56297559	A->G	-	ENSG00000062485	CS	protein_coding	Intergenic	.	.	Alu	0.2
12	56679189	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.4
12	56681051	A->G	-	ENSG00000110958	PTGES3	protein_coding	Intergenic	.	.	Alu	0.166667
12	57398143	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.142857
12	57398159	A->G	-	ENSG00000179912	R3HDM2	protein_coding	Intergenic	.	.	Alu	0.25
12	62319000	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.3
12	62319039	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.363636
12	62319084	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.3125
12	62319093	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.176471
12	62388982	A->G	+	ENSG00000135655	USP15	protein_coding	Intergenic	.	.	Alu	0.176471
12	62518205	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.454545
12	62559428	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.181818
12	62559472	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.25
12	62559545	A->G	+	ENSG00000061987	MON2	protein_coding	Intergenic	.	.	Alu	0.166667
12	64405757	A->G	+	ENSG00000184575	XPOT	protein_coding	Intergenic	.	.	Alu	0.2
12	64613677	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.357143
12	64613690	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.125
12	64633845	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.230769
12	64648688	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.2
12	64648886	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.133333
12	64648939	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.214286
12	64657074	A->G	+	ENSG00000153179	RASSF3	protein_coding	Intergenic	.	.	Alu	0.153846
12	66166200	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.533333
12	66166202	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.266667
12	66166208	A->G	-	ENSG00000228144	AC078927.1	protein_coding	Intergenic	.	.	Alu	0.352941
12	66195723	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	66195759	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.181818
12	66195762	A->G	+	ENSG00000090376	IRAK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	67289629	A->G	+	ENSG00000111530	CAND1	protein_coding	Intergenic	.	.	Alu	0.2
12	68615436	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68615437	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1875
12	68615510	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.166667
12	68615538	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.15
12	68615539	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.15
12	68616511	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.133333
12	68616516	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.2
12	68617857	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68620736	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.0769231
12	68620840	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.08
12	68622916	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.190476
12	68622963	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.26087
12	68627919	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.117647
12	68629056	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.1
12	68629126	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.111111
12	68629178	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.130435
12	68632853	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.25
12	68636869	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.125
12	68638842	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68638845	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.153846
12	68638896	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intergenic	.	.	Alu	0.142857
12	68817897	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.111111
12	68817898	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68817937	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.133333
12	68818032	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.583333
12	68818033	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68821465	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.166667
12	68821481	A->G	+	ENSG00000135679	MDM2	protein_coding	Intergenic	.	.	Alu	0.769231
12	69246008	A->G	+	ENSG00000111605	CPSF6	protein_coding	Intergenic	.	.	Alu	0.3
12	70285891	A->G	+	ENSG00000111596	CNOT2	protein_coding	Intergenic	.	.	Alu	0.538462
12	71616258	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.181818
12	71657771	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.117647
12	71657786	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.157895
12	71657867	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.08
12	71657881	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.103448
12	71657906	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0810811
12	71657907	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.0810811
12	71658568	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.08
12	71661179	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.4
12	71661181	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.5
12	71661651	A->G	-	ENSG00000133858	ZFC3H1	protein_coding	Intergenic	.	.	Alu	0.192308
12	71846902	A->G	+	ENSG00000121749	TBC1D15	protein_coding	Intergenic	.	.	Alu	0.153846
12	76556694	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.125
12	76556801	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.142857
12	76556802	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.0952381
12	76557397	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.2
12	76557480	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.3
12	76557493	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.125
12	76557503	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.125
12	76557532	A->G	-	ENSG00000091039	OSBPL8	protein_coding	Intergenic	.	.	Alu	0.214286
12	89642783	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.166667
12	89642784	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.166667
12	89643845	A->G	-	ENSG00000070961	ATP2B1	protein_coding	Intergenic	.	.	Alu	0.25
12	92090475	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.214286
12	92091630	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.25
12	92105078	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.08
12	92109732	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.363636
12	92111802	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0740741
12	92111821	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.15
12	92127804	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.2
12	92128052	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0645161
12	92129231	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.107143
12	92129236	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0714286
12	92129237	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0740741
12	92129435	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0833333
12	92129467	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0714286
12	92129472	A->G	-	ENSG00000257242	LINC01619	processed_transcript	Intergenic	.	.	Alu	0.0909091
12	93386377	A->G	+	ENSG00000173598	NUDT4	protein_coding	Intergenic	.	.	Alu	0.3
12	93436772	A->G	-	ENSG00000177889	UBE2N	protein_coding	Intergenic	.	.	Alu	0.272727
12	95481272	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.363636
12	95481274	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.3
12	95481304	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.230769
12	95481339	A->G	+	ENSG00000111142	METAP2	protein_coding	Intergenic	.	.	Alu	0.2
12	96201439	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.111111
12	96214280	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.2
12	96214419	A->G	+	ENSG00000111145	ELK3	protein_coding	Intergenic	.	.	Alu	0.166667
12	96292426	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.181818
12	96305921	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.230769
12	96379912	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.1
12	96379989	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.357143
12	96380419	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.272727
12	96386431	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.3
12	96390873	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.2
12	96391027	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.333333
12	96391035	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.4
12	96394610	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.105263
12	96395102	A->G	-	ENSG00000059758	CDK17	protein_coding	Intergenic	.	.	Alu	0.1875
12	98451109	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
12	98451115	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
12	98451131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
12	98451144	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
12	98451174	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
12	98451181	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
12	98451246	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
12	98451988	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
12	98451996	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
12	98452002	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
12	98452011	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
12	98452044	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
12	98452056	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
12	98452281	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
12	98452282	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0952381
12	98452287	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
12	98452315	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
12	98452319	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
12	98452321	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
12	98452322	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
12	98452326	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
12	98452327	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
12	98452379	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
12	98452408	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
12	98452411	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
12	98452413	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
12	98452608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
12	98596737	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0384615
12	98596862	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0344828
12	98596870	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intergenic	.	.	Alu	0.0322581
13	19711061	A->G	-	ENSG00000121390	PSPC1	protein_coding	Intergenic	.	.	Alu	0.181818
13	19851016	A->G	-	ENSG00000132950	ZMYM5	protein_coding	Intergenic	.	.	Alu	0.307692
13	21141767	A->G	+	ENSG00000150459	SAP18	protein_coding	Intergenic	.	.	Alu	0.153846
13	21497492	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.222222
13	21497517	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
13	21497526	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.272727
13	21497610	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
13	21497627	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
13	21497628	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.2
13	21497647	A->G	-	ENSG00000165487	MICU2	protein_coding	Intergenic	.	.	Alu	0.153846
13	24422787	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
13	24435706	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.7
13	24436511	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	24509304	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
13	24509445	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	24509450	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
13	24509455	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
13	24510829	A->G	-	ENSG00000205822	TPTE2P6	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
13	25262532	A->G	-	ENSG00000139505	MTMR6	protein_coding	Intergenic	.	.	Alu	0.166667
13	25304791	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.0769231
13	25304804	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.0769231
13	25306326	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.111111
13	25314143	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.2
13	25314167	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.181818
13	25314168	A->G	+	ENSG00000139496	NUP58	protein_coding	Intergenic	.	.	Alu	0.181818
13	27651758	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.55
13	27651776	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.238095
13	27651805	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.210526
13	27651824	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.15
13	27651832	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.47619
13	27652709	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.181818
13	27653086	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.333333
13	27653516	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.363636
13	27653623	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.636364
13	27653624	A->G	+	ENSG00000186184	POLR1D	protein_coding	Intergenic	.	.	Alu	0.727273
13	28186976	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28186986	A->G	+	ENSG00000152520	PAN3	protein_coding	Intergenic	.	.	Alu	0.2
13	28669515	A->G	+	ENSG00000132963	POMP	protein_coding	Intergenic	.	.	Alu	0.181818
13	32525586	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.135135
13	32525587	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.0540541
13	32525622	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.25
13	32525623	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.323529
13	32525638	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.405405
13	32525667	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intergenic	.	.	Alu	0.047619
13	40655242	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.2
13	40664018	A->G	-	ENSG00000150907	FOXO1	protein_coding	Intergenic	.	.	Alu	0.181818
13	40912872	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
13	40913213	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
13	40913229	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.136364
13	40913242	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
13	40913497	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.833333
13	40930149	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
13	40935888	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.181818
13	40936910	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40937945	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.157895
13	40937954	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0869565
13	40939672	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.142857
13	40980249	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.075
13	40993760	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0952381
13	40998035	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.105263
13	40998095	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.266667
13	41009256	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.277778
13	41011473	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.121212
13	41011477	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0625
13	41011478	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.15625
13	41011490	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.0666667
13	41011552	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.166667
13	41011559	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.130435
13	41011866	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.130435
13	41012072	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.136364
13	41012077	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	41012165	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.117647
13	41012196	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.357143
13	41012201	A->G	-	ENSG00000120690	ELF1	protein_coding	Intergenic	.	.	Alu	0.416667
13	42988648	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.4375
13	42988690	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.111111
13	42988692	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.105263
13	42988727	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.214286
13	42988729	A->G	-	ENSG00000133106	EPSTI1	protein_coding	Intergenic	.	.	Alu	0.153846
13	45347329	A->G	+	ENSG00000170919	TPT1-AS1	processed_transcript	Intergenic	.	.	Alu	0.2
13	46128068	A->G	-	ENSG00000136167	LCP1	protein_coding	Intergenic	.	.	Alu	0.25
13	48079657	A->G	-	ENSG00000229111	MED4-AS1	antisense	Intergenic	.	.	Alu	0.3
13	48239485	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.125
13	48239535	A->G	+	ENSG00000136156	ITM2B	protein_coding	Intergenic	.	.	Alu	0.133333
13	48988579	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.153846
13	48989893	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.15
13	48989937	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.0769231
13	48993306	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.25
13	49011716	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.235294
13	49011736	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.3125
13	49011741	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.25
13	49011742	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.125
13	49028048	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.538462
13	49028051	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.142857
13	49028054	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.230769
13	49028104	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.25
13	49028353	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.545455
13	49028508	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.08
13	49043057	A->G	+	ENSG00000102531	FNDC3A	protein_coding	Intergenic	.	.	Alu	0.454545
13	50113394	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.0952381
13	50113398	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.0909091
13	50113399	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.363636
13	50113818	A->G	-	ENSG00000231607	DLEU2	antisense	Intergenic	.	.	Alu	0.333333
13	52457697	A->G	+	ENSG00000136108	CKAP2	protein_coding	Intergenic	.	.	Alu	0.3
13	52630357	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.166667
13	52630401	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.2
13	52630436	A->G	+	ENSG00000273784	AL137058.2	processed_transcript	Intergenic	.	.	Alu	0.333333
13	72779188	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.181818
13	72779194	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.2
13	72779206	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.2
13	72779248	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.142857
13	72779268	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.473684
13	72779314	A->G	-	ENSG00000083520	DIS3	protein_coding	Intergenic	.	.	Alu	0.235294
13	98464770	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.2
13	98547295	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.3
13	98568610	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.181818
13	98568622	A->G	-	ENSG00000102572	STK24	protein_coding	Intergenic	.	.	Alu	0.173913
13	99333000	A->G	+	ENSG00000134882	UBAC2	protein_coding	Intergenic	.	.	Alu	0.166667
14	20453936	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intergenic	.	.	Alu	0.363636
14	20453943	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intergenic	.	.	Alu	0.5
14	20478112	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0357143
14	20478130	A->G	+	.	.	.	Intergenic	.	.	Alu	0.233333
14	20478131	A->G	+	.	.	.	Intergenic	.	.	Alu	0.15
14	20478149	A->G	+	.	.	.	Intergenic	.	.	Alu	0.160494
14	20478184	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130952
14	20478216	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0707071
14	20478219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.389474
14	20478238	A->G	+	.	.	.	Intergenic	.	.	Alu	0.290323
14	20478242	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0208333
14	20478268	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0245902
14	20478272	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0672269
14	20478285	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0852713
14	20478294	A->G	+	.	.	.	Intergenic	.	.	Alu	0.032
14	20478301	A->G	+	.	.	.	Intergenic	.	.	Alu	0.162963
14	20478315	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0787402
14	20480313	A->G	+	.	.	.	Intergenic	.	.	Alu	0.049505
14	20480336	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0392157
14	20480337	A->G	+	.	.	.	Intergenic	.	.	Alu	0.178218
14	20480350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0285714
14	20480405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.229167
14	20480406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.183673
14	20480478	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0234375
14	20480502	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
14	20480856	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0898876
14	20480873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0280374
14	20480902	A->G	+	.	.	.	Intergenic	.	.	Alu	0.020202
14	20480942	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0454545
14	20480946	A->G	+	.	.	.	Intergenic	.	.	Alu	0.179104
14	20480963	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
14	20481007	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
14	20481048	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0263158
14	21232974	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.454545
14	21232975	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.5
14	21244089	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.117647
14	21245913	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0606061
14	21245917	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.117647
14	21245952	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0588235
14	21245970	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.103448
14	21246040	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0909091
14	21246047	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.285714
14	21246096	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.315789
14	21246119	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.105263
14	21246370	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.380952
14	21246520	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.157895
14	21248120	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0909091
14	21248121	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0882353
14	21252419	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.117647
14	21252422	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.277778
14	21252426	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0952381
14	21252439	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0869565
14	21252448	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.291667
14	21252449	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.130435
14	21252492	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.105263
14	21252506	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21252540	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.111111
14	21252586	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.142857
14	21252931	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.166667
14	21253091	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.25
14	21256747	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0434783
14	21256940	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.2
14	21257691	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.08
14	21257729	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0588235
14	21257836	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0625
14	21261071	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.125
14	21265566	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.111111
14	21265598	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.08
14	21265721	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.0357143
14	21265737	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.166667
14	21265764	A->G	-	ENSG00000092199	HNRNPC	protein_coding	Intergenic	.	.	Alu	0.288889
14	21454383	A->G	-	ENSG00000100888	CHD8	protein_coding	Intergenic	.	.	Alu	0.2
14	21454386	A->G	-	ENSG00000100888	CHD8	protein_coding	Intergenic	.	.	Alu	0.3
14	22908172	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.2
14	22914753	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.2
14	22915436	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.105263
14	22915471	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.157895
14	22915472	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.105263
14	22916001	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.142857
14	22916047	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.1875
14	22916049	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.2
14	22916081	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.105263
14	22916084	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.1
14	22916094	A->G	-	ENSG00000100461	RBM23	protein_coding	Intergenic	.	.	Alu	0.0952381
14	23074309	A->G	-	ENSG00000100813	ACIN1	protein_coding	Intergenic	.	.	Alu	0.3
14	24168892	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
14	24169013	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
14	24169895	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
14	24169964	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	24170125	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
14	31114514	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.153846
14	31114531	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.142857
14	31160840	A->G	-	ENSG00000092148	HECTD1	protein_coding	Intergenic	.	.	Alu	0.2
14	34583534	A->G	-	ENSG00000129515	SNX6	protein_coding	Intergenic	.	.	Alu	0.2
14	34773159	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.3
14	34787467	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.181818
14	34787468	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.181818
14	34787521	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.166667
14	34787561	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.105263
14	34787574	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.105263
14	34788332	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.0952381
14	34788477	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.1
14	34788559	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.0869565
14	34788576	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.0833333
14	34788583	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.1
14	34790491	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.1
14	34790557	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.142857
14	34790581	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.266667
14	34790620	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.384615
14	34790626	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.2
14	34790687	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.117647
14	34790868	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.1
14	34790960	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.125
14	34790998	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.0833333
14	34791000	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.217391
14	34791010	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.0909091
14	34791039	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.142857
14	34791059	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.272727
14	34791117	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.208333
14	34847998	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.2
14	34848011	A->G	-	ENSG00000198604	BAZ1A	protein_coding	Intergenic	.	.	Alu	0.4
14	34980364	A->G	-	ENSG00000258704	SRP54-AS1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.181818
14	35002956	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.181818
14	35003008	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.272727
14	35003020	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.454545
14	35003633	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.166667
14	35005122	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.166667
14	35005123	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.4
14	35005130	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.4
14	35005131	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.2
14	35005212	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.533333
14	35005242	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.3125
14	35005259	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.45
14	35005606	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.181818
14	35005616	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.5
14	35005617	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.166667
14	35025936	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.130435
14	35025958	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.166667
14	35026242	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.25
14	35026244	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.363636
14	35026307	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.181818
14	35026321	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.15
14	35026322	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.1
14	35026362	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.315789
14	35026367	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.117647
14	35027227	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.272727
14	35027259	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.125
14	35027298	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.666667
14	35027304	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.136364
14	35027503	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.272727
14	35027546	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.153846
14	35027570	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.363636
14	35027578	A->G	+	ENSG00000100883	SRP54	protein_coding	Intergenic	.	.	Alu	0.3
14	35049020	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.4
14	35049024	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.333333
14	35049071	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.146341
14	35049074	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.365854
14	35049100	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.025
14	35049520	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.350649
14	35049522	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0921053
14	35049526	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0843373
14	35049529	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.025641
14	35049603	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0625
14	35049608	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.357143
14	35049620	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.1
14	35049735	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.2
14	35049773	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	35052686	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	35052709	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.16129
14	35052710	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0689655
14	35052715	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0606061
14	35052775	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	35052799	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.151515
14	35052801	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0588235
14	35052815	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0645161
14	35052831	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.0555556
14	35055647	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.153846
14	35058246	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.117647
14	35058839	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.25
14	35058851	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.210526
14	35059187	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.363636
14	35064859	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.266667
14	35070567	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.2
14	35070575	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.2
14	35074425	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.166667
14	35074952	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.2
14	35085064	A->G	+	ENSG00000151327	FAM177A1	protein_coding	Intergenic	.	.	Alu	0.2
14	35767437	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.230769
14	35767443	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.214286
14	35768025	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.105263
14	35768033	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.0909091
14	35768042	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	35768050	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.166667
14	35768070	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.375
14	35768127	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.3125
14	35768146	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.142857
14	35768886	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.181818
14	35771311	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.111111
14	35771312	A->G	-	ENSG00000174373	RALGAPA1	protein_coding	Intergenic	.	.	Alu	0.117647
14	39324686	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.2
14	39324687	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.2
14	39324707	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.166667
14	39324736	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.4
14	39324804	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.7
14	39324807	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.333333
14	39324816	A->G	+	ENSG00000150527	MIA2	protein_coding	Intergenic	.	.	Alu	0.416667
14	39427938	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.347826
14	39427942	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.0869565
14	39428302	A->G	-	ENSG00000165355	FBXO33	protein_coding	Intergenic	.	.	Alu	0.0869565
14	44943495	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.142857
14	44943540	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.166667
14	44943557	A->G	-	ENSG00000179454	KLHL28	protein_coding	Intergenic	.	.	Alu	0.2
14	49584256	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.1
14	49584664	A->G	-	ENSG00000213741	RPS29	protein_coding	Intergenic	.	.	Alu	0.0810811
14	50196946	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.133333
14	50202691	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.3
14	50205675	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.2
14	50205687	A->G	-	ENSG00000100485	SOS2	protein_coding	Intergenic	.	.	Alu	0.3
14	50725599	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.0588235
14	50725617	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.130435
14	50725659	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.766667
14	50725663	A->G	-	ENSG00000100503	NIN	protein_coding	Intergenic	.	.	Alu	0.241379
14	51917798	A->G	+	ENSG00000258928	AL358333.2	antisense	Intergenic	.	.	Alu	0.2
14	52712674	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.142857
14	52712692	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.4
14	52712709	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.133333
14	52713072	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.363636
14	52714140	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.181818
14	52717873	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.3
14	52717874	A->G	+	ENSG00000100519	PSMC6	protein_coding	Intergenic	.	.	Alu	0.2
14	54892844	A->G	-	ENSG00000131979	GCH1	protein_coding	Intergenic	.	.	Alu	0.2
14	54892868	A->G	-	ENSG00000131979	GCH1	protein_coding	Intergenic	.	.	Alu	0.181818
14	55054382	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.125
14	55055154	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.105263
14	55056651	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0625
14	55056691	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.190476
14	55056716	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.2
14	55057695	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0909091
14	55057705	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0833333
14	55057706	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0869565
14	55057919	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0625
14	55058711	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.125
14	55060301	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0952381
14	55060360	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.117647
14	55060881	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.15625
14	55060882	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.117647
14	55060956	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intergenic	.	.	Alu	0.0540541
14	55134973	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.0588235
14	55135071	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.0571429
14	55135074	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.181818
14	55135754	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.0666667
14	55135767	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.212121
14	55135779	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.151515
14	55135839	A->G	+	ENSG00000131981	LGALS3	protein_coding	Intergenic	.	.	Alu	0.266667
14	55284825	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55291780	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	55291827	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.142857
14	55291868	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.153846
14	55294406	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.307692
14	55294496	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.125
14	55302553	A->G	+	ENSG00000178974	FBXO34	protein_coding	Intergenic	.	.	Alu	0.181818
14	58289877	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.416667
14	58289878	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.2
14	58289918	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.181818
14	58289919	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.181818
14	58290845	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intergenic	.	.	Alu	0.9
14	60273852	A->G	+	ENSG00000100614	PPM1A	protein_coding	Intergenic	.	.	Alu	0.2
14	61328828	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.181818
14	61337635	A->G	+	ENSG00000027075	PRKCH	protein_coding	Intergenic	.	.	Alu	0.3
14	61738849	A->G	+	ENSG00000100644	HIF1A	protein_coding	Intergenic	.	.	Alu	0.028169
14	64515727	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.214286
14	64516128	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.047619
14	64519248	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.125
14	64519249	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.0833333
14	64519278	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.117647
14	64519562	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.0869565
14	64519760	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.0967742
14	64526764	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.153846
14	64526786	A->G	+	ENSG00000126804	ZBTB1	protein_coding	Intergenic	.	.	Alu	0.285714
14	67593233	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.272727
14	67593245	A->G	-	ENSG00000100564	PIGH	protein_coding	Intergenic	.	.	Alu	0.2
14	71342137	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.166667
14	71390592	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.461538
14	71390638	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.153846
14	71390654	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.142857
14	71402611	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.181818
14	71433375	A->G	+	ENSG00000197555	SIPA1L1	protein_coding	Intergenic	.	.	Alu	0.3
14	73086350	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.3
14	73086388	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.181818
14	73093571	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
14	73093606	A->G	+	ENSG00000119707	RBM25	protein_coding	Intergenic	.	.	Alu	0.2
14	73137993	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73139508	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.181818
14	73143827	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73143830	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.416667
14	73143868	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.363636
14	73144948	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.125
14	73144992	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.133333
14	73145577	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.235294
14	73145614	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.125
14	73145620	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.142857
14	73145845	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.285714
14	73145851	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.333333
14	73145852	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.176471
14	73145911	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73145931	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.307692
14	73145960	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.153846
14	73145986	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.4
14	73145987	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.125
14	73146069	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.346154
14	73147246	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.2
14	73152532	A->G	+	ENSG00000080815	PSEN1	protein_coding	Intergenic	.	.	Alu	0.125
14	73890799	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.214286
14	73890863	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.133333
14	73891471	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intergenic	.	.	Alu	0.157895
14	74657670	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.2
14	74657677	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.636364
14	74657691	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.461538
14	74678925	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.4
14	74678926	A->G	-	ENSG00000119682	AREL1	protein_coding	Intergenic	.	.	Alu	0.2
14	74895065	A->G	+	ENSG00000119689	DLST	protein_coding	Intergenic	.	.	Alu	0.3
14	76766457	A->G	+	ENSG00000071246	VASH1	protein_coding	Intergenic	.	.	Alu	0.117647
14	76766480	A->G	+	ENSG00000071246	VASH1	protein_coding	Intergenic	.	.	Alu	0.294118
14	76766517	A->G	+	ENSG00000071246	VASH1	protein_coding	Intergenic	.	.	Alu	0.133333
14	76766553	A->G	+	ENSG00000071246	VASH1	protein_coding	Intergenic	.	.	Alu	0.176471
14	76766662	A->G	+	ENSG00000071246	VASH1	protein_coding	Intergenic	.	.	Alu	0.1875
14	76766694	A->G	+	ENSG00000071246	VASH1	protein_coding	Intergenic	.	.	Alu	0.111111
14	76767013	A->G	+	ENSG00000071246	VASH1	protein_coding	Intergenic	.	.	Alu	0.214286
14	76767016	A->G	+	ENSG00000071246	VASH1	protein_coding	Intergenic	.	.	Alu	0.1875
14	77535200	A->G	-	ENSG00000100596	SPTLC2	protein_coding	Intergenic	.	.	Alu	0.2
14	77756796	A->G	-	ENSG00000119705	SLIRP	protein_coding	Intergenic	.	.	Alu	0.272727
14	77756797	A->G	-	ENSG00000119705	SLIRP	protein_coding	Intergenic	.	.	Alu	0.181818
14	91464245	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.181818
14	91469697	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91469782	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.105263
14	91469791	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.111111
14	91480801	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.25
14	91480919	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.111111
14	91480983	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.235294
14	91481148	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.230769
14	91500904	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.363636
14	91500920	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.214286
14	91502331	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.166667
14	91502417	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.307692
14	91503098	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.2
14	91507068	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.0952381
14	91507139	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.2
14	91507162	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.115385
14	91507238	A->G	-	ENSG00000100796	PPP4R3A	protein_coding	Intergenic	.	.	Alu	0.142857
14	91858823	A->G	-	ENSG00000165929	TC2N	protein_coding	Intergenic	.	.	Alu	0.4
14	92660815	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.0714286
14	92661470	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.666667
14	92661471	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.692308
14	92661538	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.2
14	92661630	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.157895
14	92662904	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.125
14	92662910	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.0833333
14	92662923	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.315789
14	92662952	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.0952381
14	92662985	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.111111
14	92662994	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.166667
14	92662995	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.294118
14	92663011	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.117647
14	92663073	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.4
14	92663085	A->G	+	ENSG00000100599	RIN3	protein_coding	Intergenic	.	.	Alu	0.25
14	94053475	A->G	-	ENSG00000089737	DDX24	protein_coding	Intergenic	.	.	Alu	0.3
14	94053754	A->G	-	ENSG00000089737	DDX24	protein_coding	Intergenic	.	.	Alu	0.075
14	99250326	A->G	-	ENSG00000127152	BCL11B	protein_coding	Intergenic	.	.	Alu	0.2
15	22843227	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.2
15	22846603	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.2
15	22854228	A->G	+	ENSG00000140157	NIPA2	protein_coding	Intergenic	.	.	Alu	0.3
15	24963339	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.210526
15	24963367	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0689655
15	24963370	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0689655
15	24963388	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.16
15	24963405	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.222222
15	24963468	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.238095
15	24963469	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.15
15	24963495	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.222222
15	24963504	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.0952381
15	24963825	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.157895
15	24963853	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.304348
15	24963870	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.391304
15	24963921	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.137931
15	24963935	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.121212
15	24964007	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.2
15	24964335	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.15
15	24964393	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.142857
15	24964410	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.142857
15	24964419	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.142857
15	24964422	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.285714
15	24964423	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.25
15	24964432	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.125
15	24964445	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.142857
15	24964474	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.230769
15	24964477	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.25
15	24964483	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.4
15	24964516	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.384615
15	24964560	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.210526
15	24964566	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.541667
15	24964581	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.333333
15	24965403	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.333333
15	24965430	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.266667
15	24969349	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.133333
15	24970360	A->G	+	ENSG00000273173	SNURF	protein_coding	Intergenic	.	.	Alu	0.272727
15	25426884	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.181818
15	25426915	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.142857
15	25433825	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.25
15	25433943	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.25
15	25433948	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.2
15	25436732	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.727273
15	25436735	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intergenic	.	.	Alu	0.727273
15	30937768	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.3
15	30937770	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	0.3
15	30937925	A->G	-	ENSG00000198690	FAN1	protein_coding	Intergenic	.	.	Alu	1
15	32518192	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0789474
15	32518387	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0689655
15	32522552	A->G	-	ENSG00000223509	AC135983.2	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.125
15	34900109	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.2
15	34900112	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.2
15	34900165	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.166667
15	34951523	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.2
15	34951842	A->G	-	ENSG00000021776	AQR	protein_coding	Intergenic	.	.	Alu	0.48
15	40692778	A->G	-	ENSG00000245849	RAD51-AS1	processed_transcript	Intergenic	.	.	Alu	0.4
15	41287209	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intergenic	.	.	Alu	0.166667
15	41737335	A->G	+	ENSG00000174197	MGA	protein_coding	Intergenic	.	.	Alu	0.181818
15	41737338	A->G	+	ENSG00000174197	MGA	protein_coding	Intergenic	.	.	Alu	0.272727
15	41737398	A->G	+	ENSG00000174197	MGA	protein_coding	Intergenic	.	.	Alu	0.2
15	41737417	A->G	+	ENSG00000174197	MGA	protein_coding	Intergenic	.	.	Alu	0.230769
15	41737423	A->G	+	ENSG00000174197	MGA	protein_coding	Intergenic	.	.	Alu	0.285714
15	41737429	A->G	+	ENSG00000174197	MGA	protein_coding	Intergenic	.	.	Alu	0.214286
15	41738278	A->G	+	ENSG00000174197	MGA	protein_coding	Intergenic	.	.	Alu	0.4
15	41829921	A->G	+	ENSG00000243789	JMJD7	protein_coding	Intergenic	.	.	Alu	0.153846
15	41830292	A->G	+	ENSG00000243789	JMJD7	protein_coding	Intergenic	.	.	Alu	0.230769
15	41830308	A->G	+	ENSG00000243789	JMJD7	protein_coding	Intergenic	.	.	Alu	0.1875
15	41832405	A->G	+	ENSG00000243789	JMJD7	protein_coding	Intergenic	.	.	Alu	0.25
15	43748468	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.08
15	43749899	A->G	+	ENSG00000167004	PDIA3	protein_coding	Intergenic	.	.	Alu	0.142857
15	44564228	A->G	+	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.117647
15	44583375	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.25
15	44583419	A->G	-	ENSG00000104133	SPG11	protein_coding	Intergenic	.	.	Alu	0.2
15	49034792	A->G	-	ENSG00000138593	SECISBP2L	protein_coding	Intergenic	.	.	Alu	0.2
15	50745672	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.2
15	50759330	A->G	-	ENSG00000138600	SPPL2A	protein_coding	Intergenic	.	.	Alu	0.3
15	52022471	A->G	+	ENSG00000069956	MAPK6	protein_coding	Intergenic	.	.	Alu	0.2
15	52558195	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.129032
15	52558237	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.0952381
15	52558256	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.26087
15	52558882	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.375
15	52558902	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.142857
15	52558939	A->G	-	ENSG00000128989	ARPP19	protein_coding	Intergenic	.	.	Alu	0.25
15	55361253	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.545455
15	55405037	A->G	-	ENSG00000260916	CCPG1	protein_coding	Intergenic	.	.	Alu	0.181818
15	58176432	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.384615
15	58176443	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.15
15	58176704	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.125
15	58176791	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.375
15	58176798	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.142857
15	58176808	A->G	+	ENSG00000103569	AQP9	protein_coding	Intergenic	.	.	Alu	0.214286
15	58883863	A->G	-	ENSG00000137776	SLTM	protein_coding	Intergenic	.	.	Alu	0.2
15	59665485	A->G	-	ENSG00000227161	AC092755.1	sense_overlapping	Intergenic	.	.	Alu	0.25
15	60372805	A->G	-	ENSG00000182718	ANXA2	protein_coding	Intergenic	.	.	Alu	0.142857
15	60372818	A->G	-	ENSG00000182718	ANXA2	protein_coding	Intergenic	.	.	Alu	0.181818
15	60388088	A->G	-	ENSG00000182718	ANXA2	protein_coding	Intergenic	.	.	Alu	0.142857
15	60521513	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.166667
15	60522675	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.133333
15	60523908	A->G	-	ENSG00000245534	RORA-AS1	antisense	Intergenic	.	.	Alu	0.2
15	61861635	A->G	-	ENSG00000259564	AC009554.1	antisense	Intergenic	.	.	Alu	0.142857
15	61861637	A->G	-	ENSG00000259564	AC009554.1	antisense	Intergenic	.	.	Alu	0.214286
15	63124743	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.416667
15	63128440	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.230769
15	63129011	A->G	+	ENSG00000103642	LACTB	protein_coding	Intergenic	.	.	Alu	0.375
15	63258276	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.2
15	63258302	A->G	+	ENSG00000166128	RAB8B	protein_coding	Intergenic	.	.	Alu	0.166667
15	63548793	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.166667
15	63550902	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.285714
15	63583384	A->G	+	ENSG00000140455	USP3	protein_coding	Intergenic	.	.	Alu	0.0714286
15	63693056	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.166667
15	63693121	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.272727
15	63693411	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.133333
15	63693516	A->G	-	ENSG00000103657	HERC1	protein_coding	Intergenic	.	.	Alu	0.3
15	64868977	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.285714
15	64868995	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.133333
15	64869061	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64869062	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.0909091
15	64869228	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.142857
15	64869242	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.272727
15	64872109	A->G	+	ENSG00000249240	AC069368.1	protein_coding	Intergenic	.	.	Alu	0.166667
15	65668238	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65668239	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65668261	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65668271	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.363636
15	65668294	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.272727
15	65668301	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.916667
15	65668306	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.363636
15	65668347	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.538462
15	65668365	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.333333
15	65668373	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.357143
15	65668377	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.153846
15	65668385	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.166667
15	65668405	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.142857
15	65668451	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.545455
15	65668476	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.25
15	65668481	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65668482	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.636364
15	65668604	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3
15	65668628	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.3
15	65668807	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65734871	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.357143
15	65734899	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.133333
15	65734910	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.428571
15	65734916	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.266667
15	65737117	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.111111
15	65737136	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.181818
15	65737286	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.0952381
15	65737301	A->G	-	ENSG00000174485	DENND4A	protein_coding	Intergenic	.	.	Alu	0.176471
15	68059269	A->G	+	ENSG00000033800	PIAS1	protein_coding	Intergenic	.	.	Alu	0.2
15	72215141	A->G	-	ENSG00000067225	PKM	protein_coding	Intergenic	.	.	Alu	0.181818
15	72529377	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.153846
15	72561853	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.333333
15	72561862	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.181818
15	72563150	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.2
15	72563151	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.272727
15	72563190	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.166667
15	72577052	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.538462
15	72577588	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.153846
15	72577593	A->G	+	ENSG00000166233	ARIH1	protein_coding	Intergenic	.	.	Alu	0.214286
15	72763254	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.153846
15	72776221	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.25
15	72776222	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.25
15	72776267	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.3
15	72776976	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.318182
15	72777006	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.578947
15	72778140	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.210526
15	72778149	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.111111
15	72780687	A->G	-	ENSG00000159322	ADPGK	protein_coding	Intergenic	.	.	Alu	0.125
15	75214096	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
15	75349768	A->G	+	ENSG00000140398	NEIL1	protein_coding	Intergenic	.	.	Alu	0.117647
15	75349771	A->G	+	ENSG00000140398	NEIL1	protein_coding	Intergenic	.	.	Alu	0.235294
15	75351450	A->G	+	ENSG00000140398	NEIL1	protein_coding	Intergenic	.	.	Alu	0.2
15	75366011	A->G	-	ENSG00000140400	MAN2C1	protein_coding	Intergenic	.	.	Alu	0.428571
15	75376776	A->G	-	ENSG00000169375	SIN3A	protein_coding	Intergenic	.	.	Alu	0.166667
15	75886143	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.5
15	75886808	A->G	+	ENSG00000140367	UBE2Q2	protein_coding	Intergenic	.	.	Alu	0.230769
15	78887803	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	78887878	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.08
15	78887879	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.16
15	78887883	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0833333
15	78888007	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.125
15	78888360	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0606061
15	78890585	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.115385
15	78890599	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intergenic	.	.	Alu	0.0869565
15	78898338	A->G	+	.	.	.	Intergenic	.	.	Alu	0.06
15	78898449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
15	80111998	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.363636
15	80112017	A->G	+	ENSG00000086666	ZFAND6	protein_coding	Intergenic	.	.	Alu	0.166667
15	82824941	A->G	+	ENSG00000156232	WHAMM	protein_coding	Intergenic	.	.	Alu	0.384615
15	85586336	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.0952381
15	85657012	A->G	+	ENSG00000259367	AC087286.2	antisense	Intergenic	.	.	Alu	0.222222
15	85678832	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.2
15	85694982	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.333333
15	85701471	A->G	+	ENSG00000259453	AC087286.4	sense_intronic	Intergenic	.	.	Alu	0.2
15	85737154	A->G	+	ENSG00000170776	AKAP13	protein_coding	Intergenic	.	.	Alu	0.111111
15	88640700	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.0606061
15	88640706	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.117647
15	88640735	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.117647
15	88640777	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.08
15	88641134	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.15
15	88641234	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.121212
15	88641247	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.0882353
15	88641712	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.133333
15	88641780	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.0740741
15	88642096	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.181818
15	88642203	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.08
15	88642641	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.09375
15	88642694	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.102564
15	88642696	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.0526316
15	88642697	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.171429
15	88642710	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.0588235
15	88642717	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.05
15	88642754	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.0416667
15	88642758	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.0666667
15	88642814	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.1
15	88642825	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.521739
15	88642851	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.117647
15	88642890	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.6
15	88642968	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.454545
15	88643009	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.111111
15	88643083	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.111111
15	88643084	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.117647
15	88643085	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.117647
15	88643088	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.1875
15	88643096	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.142857
15	88643160	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.416667
15	88643190	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.25
15	88643502	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.166667
15	88643503	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.125
15	88643610	A->G	+	ENSG00000172183	ISG20	protein_coding	Intergenic	.	.	Alu	0.181818
15	89094623	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.4
15	89094629	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.285714
15	89097922	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.285714
15	89097965	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.235294
15	89097984	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.25
15	89097991	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.157895
15	89099366	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.2
15	89099510	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.166667
15	89099515	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.153846
15	89100309	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.272727
15	89100722	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intergenic	.	.	Alu	0.125
15	89796104	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.1875
15	89796133	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.230769
15	89812654	A->G	-	ENSG00000166825	ANPEP	protein_coding	Intergenic	.	.	Alu	0.0810811
15	90027446	A->G	+	ENSG00000140548	ZNF710	protein_coding	Intergenic	.	.	Alu	0.2
15	91949989	A->G	+	ENSG00000176463	SLCO3A1	protein_coding	Intergenic	.	.	Alu	0.181818
15	92893998	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0666667
15	92894043	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0789474
15	92894137	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.0740741
15	92894652	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.153846
15	92894774	A->G	+	ENSG00000272888	LINC01578	processed_transcript	Intergenic	.	.	Alu	0.111111
15	92916610	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.3
15	92916617	A->G	+	ENSG00000279765	AC013394.1	protein_coding	Intergenic	.	.	Alu	0.181818
15	92987364	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	92987373	A->G	+	ENSG00000173575	CHD2	protein_coding	Intergenic	.	.	Alu	0.181818
15	98656294	A->G	+	ENSG00000140443	IGF1R	protein_coding	Intergenic	.	.	Alu	0.2
15	98656330	A->G	+	ENSG00000140443	IGF1R	protein_coding	Intergenic	.	.	Alu	0.111111
15	98656402	A->G	+	ENSG00000140443	IGF1R	protein_coding	Intergenic	.	.	Alu	0.166667
15	99694532	A->G	+	ENSG00000068305	MEF2A	protein_coding	Intergenic	.	.	Alu	0.6
16	11550739	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0606061
16	11555537	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.176471
16	11566720	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.3
16	11568844	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.2
16	11568929	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.153846
16	11569469	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.142857
16	11569485	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.136364
16	11569487	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.428571
16	11569500	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0833333
16	11569828	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.2
16	11570746	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.133333
16	11570817	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.157895
16	11571122	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0952381
16	11571205	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.176471
16	11571967	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.363636
16	11574813	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.166667
16	11575983	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.1
16	11577836	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.1875
16	11578034	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.444444
16	11578174	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0967742
16	11578314	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.125
16	11578492	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.1
16	11578530	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.125
16	11580318	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.111111
16	11580336	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.2
16	11580800	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0769231
16	11580828	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.125
16	11580830	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0645161
16	11580832	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.1875
16	11580929	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0952381
16	11580984	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.190476
16	11581399	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0833333
16	11581402	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.0769231
16	11581403	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.16
16	11581567	A->G	-	ENSG00000189067	LITAF	protein_coding	Intergenic	.	.	Alu	0.333333
16	11707825	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.3
16	11707830	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.454545
16	11707865	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.272727
16	11707866	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.181818
16	11725911	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.166667
16	11725913	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.285714
16	11725933	A->G	-	ENSG00000153066	TXNDC11	protein_coding	Intergenic	.	.	Alu	0.357143
16	11879611	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.125
16	11882698	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.142857
16	11882704	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.125
16	11882758	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.117647
16	11882772	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.153846
16	11882868	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.181818
16	11882921	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.294118
16	11888386	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.0952381
16	11889119	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.388889
16	11891801	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.142857
16	11894765	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.142857
16	11895322	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.105263
16	11895331	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.368421
16	11895354	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.1
16	11895418	A->G	-	ENSG00000263307	AC007216.4	antisense	Intergenic	.	.	Alu	0.117647
16	11895664	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0769231
16	11895719	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.227273
16	11895723	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.45
16	11895738	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.133333
16	11901839	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0833333
16	11901879	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0952381
16	11902037	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	11902677	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.142857
16	11902680	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.25
16	11902702	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.25
16	11902703	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	11902989	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.25
16	11902990	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	11904829	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0645161
16	11904843	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0666667
16	11904992	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	11905006	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.137931
16	11905669	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.166667
16	11905723	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	11905752	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.181818
16	11906534	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.0789474
16	11912288	A->G	-	ENSG00000103342	GSPT1	protein_coding	Intergenic	.	.	Alu	0.117647
16	14639447	A->G	+	ENSG00000103429	BFAR	protein_coding	Intergenic	.	.	Alu	0.166667
16	14639473	A->G	+	ENSG00000103429	BFAR	protein_coding	Intergenic	.	.	Alu	0.142857
16	15015015	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.125
16	15015126	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.125
16	15015148	A->G	+	ENSG00000179889	PDXDC1	protein_coding	Intergenic	.	.	Alu	0.45
16	15701035	A->G	+	ENSG00000072864	NDE1	protein_coding	Intergenic	.	.	Alu	0.272727
16	15734326	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.0909091
16	15734363	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.142857
16	15734368	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.166667
16	15734392	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.153846
16	15734399	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.181818
16	15736378	A->G	+	ENSG00000133392	MYH11	protein_coding	Intergenic	.	.	Alu	0.230769
16	15974887	A->G	+	ENSG00000103222	ABCC1	protein_coding	Intergenic	.	.	Alu	0.5
16	18786943	A->G	-	ENSG00000134419	RPS15A	protein_coding	Intergenic	.	.	Alu	0.272727
16	18848601	A->G	-	ENSG00000157106	SMG1	protein_coding	Intergenic	.	.	Alu	0.4
16	20739243	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.230769
16	20739244	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.25
16	20739249	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.166667
16	20739273	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.133333
16	20739282	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.133333
16	20739283	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.2
16	20739304	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.454545
16	20739364	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.2
16	20739369	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.214286
16	20739370	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.142857
16	20739395	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.1875
16	20739457	A->G	-	ENSG00000005187	ACSM3	protein_coding	Intergenic	.	.	Alu	0.2
16	20894023	A->G	-	ENSG00000188215	DCUN1D3	protein_coding	Intergenic	.	.	Alu	0.2
16	21811193	A->G	-	ENSG00000248124	RRN3P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.6
16	21821126	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
16	21868384	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.181818
16	21868398	A->G	-	ENSG00000185864	NPIPB4	protein_coding	Intergenic	.	.	Alu	0.3
16	21955925	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.181818
16	21955926	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.181818
16	21956039	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.25
16	21956059	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.333333
16	21956072	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.230769
16	21956086	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.357143
16	21956087	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.5
16	21956099	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.294118
16	21956424	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.125
16	21956450	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.0689655
16	21956456	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.08
16	21956469	A->G	+	ENSG00000140740	UQCRC2	protein_coding	Intergenic	.	.	Alu	0.178571
16	22301435	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.0571429
16	22301470	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.0625
16	22311567	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.25
16	22311572	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.111111
16	22311626	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.133333
16	22311632	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.153846
16	22312376	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.153846
16	22312441	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.307692
16	22330143	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.08
16	22330319	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.225806
16	22330320	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.1875
16	22330321	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.275862
16	22330347	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.103448
16	22330362	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intergenic	.	.	Alu	0.125
16	22477171	A->G	+	ENSG00000237296	SMG1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
16	23470990	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.2
16	23471679	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.0952381
16	23471778	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23507528	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.238095
16	23507700	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.6
16	23507714	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.5
16	23507908	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.133333
16	23507946	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23508098	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.166667
16	23508105	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.2
16	23508130	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.285714
16	23508131	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.230769
16	23508169	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.454545
16	23508285	A->G	-	ENSG00000103365	GGA2	protein_coding	Intergenic	.	.	Alu	0.384615
16	27316106	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.0784314
16	27316168	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.0416667
16	27316171	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.0833333
16	27316236	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.107143
16	27316940	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.0869565
16	27317118	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.22449
16	27322306	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.0869565
16	27322659	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.1
16	27328103	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.181818
16	27334089	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.25
16	27338343	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.153846
16	27343611	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.133333
16	27343637	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.2
16	27343638	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.111111
16	27343671	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.1
16	27344080	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.107143
16	27344085	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.0769231
16	27344095	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.428571
16	27344140	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.285714
16	27361213	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.228571
16	27361327	A->G	+	ENSG00000077238	IL4R	protein_coding	Intergenic	.	.	Alu	0.0952381
16	27418400	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.133333
16	27419095	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.4
16	27419175	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.0769231
16	27427454	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.181818
16	27427460	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.166667
16	27429663	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.181818
16	27431672	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.2
16	27436209	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.0869565
16	27437731	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.25
16	27437762	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.277778
16	27437775	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.1875
16	27437804	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.1
16	27437820	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.214286
16	27437824	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.210526
16	27437828	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.15
16	27437886	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.12
16	27437907	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.0833333
16	27438630	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.181818
16	27438750	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.571429
16	27440512	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.2
16	27440836	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.2
16	27440928	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.416667
16	27441890	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.230769
16	27441907	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.133333
16	27441914	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.538462
16	27442623	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.125
16	27442624	A->G	+	ENSG00000103522	IL21R	protein_coding	Intergenic	.	.	Alu	0.125
16	28141771	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.272727
16	28168232	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.166667
16	28168240	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28168250	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28168267	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.583333
16	28168288	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.5
16	28168371	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28168383	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.166667
16	28168477	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.25
16	28168637	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.333333
16	28168667	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.428571
16	28168670	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.8
16	28168699	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.230769
16	28168713	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.166667
16	28168716	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.545455
16	28168717	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.2
16	28168718	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.181818
16	28168740	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.125
16	28168766	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.210526
16	28168823	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.125
16	28168842	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.485714
16	28168852	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.0689655
16	28168894	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.545455
16	28168903	A->G	-	ENSG00000169180	XPO6	protein_coding	Intergenic	.	.	Alu	0.117647
16	28827616	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.25
16	28828820	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.166667
16	28828825	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.181818
16	28828923	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.727273
16	28829132	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.157895
16	28829136	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.352941
16	28829237	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.2
16	28831381	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.1
16	28831445	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.352941
16	28831686	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.235294
16	28831722	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.333333
16	28831724	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.1875
16	28831805	A->G	+	ENSG00000168488	ATXN2L	protein_coding	Intergenic	.	.	Alu	0.181818
16	28915951	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.272727
16	28915977	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.2
16	28915978	A->G	-	ENSG00000177548	RABEP2	protein_coding	Intergenic	.	.	Alu	0.2
16	28955010	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.25
16	28955104	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.153846
16	28955126	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.625
16	28955143	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.380952
16	28955146	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.142857
16	28955176	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.142857
16	28955357	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.727273
16	28955798	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.214286
16	28955841	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.266667
16	28955851	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intergenic	.	.	Alu	0.466667
16	29556753	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
16	29556757	A->G	-	ENSG00000205534	SMG1P2	unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	29749464	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
16	29749493	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
16	29821962	A->G	+	ENSG00000281348	AC120114.5	protein_coding	Intergenic	.	.	Alu	0.307692
16	29821970	A->G	+	ENSG00000281348	AC120114.5	protein_coding	Intergenic	.	.	Alu	0.142857
16	30071996	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
16	30072002	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
16	30080260	A->G	+	ENSG00000149923	PPP4C	protein_coding	Intergenic	.	.	Alu	0.5
16	30495047	A->G	+	ENSG00000005844	ITGAL	protein_coding	Intergenic	.	.	Alu	0.2
16	31035783	A->G	+	ENSG00000103496	STX4	protein_coding	Intergenic	.	.	Alu	0.0952381
16	31035786	A->G	+	ENSG00000103496	STX4	protein_coding	Intergenic	.	.	Alu	0.142857
16	31035835	A->G	+	ENSG00000103496	STX4	protein_coding	Intergenic	.	.	Alu	0.222222
16	31035962	A->G	+	ENSG00000103496	STX4	protein_coding	Intergenic	.	.	Alu	0.1
16	31036976	A->G	+	ENSG00000103496	STX4	protein_coding	Intergenic	.	.	Alu	0.125
16	31045250	A->G	+	ENSG00000260911	AC135050.3	lincRNA	Intergenic	.	.	Alu	0.25
16	31047576	A->G	+	ENSG00000260911	AC135050.3	lincRNA	Intergenic	.	.	Alu	0.4
16	31063195	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.107143
16	31063249	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.411765
16	31063279	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.0909091
16	31063301	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.125
16	31063303	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.0769231
16	31063311	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.173913
16	31063312	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.478261
16	31063326	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.105263
16	31063330	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.631579
16	31063404	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.1
16	31063406	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.4
16	31063412	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.210526
16	31063417	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.5
16	31063419	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.157895
16	31063420	A->G	-	ENSG00000167394	ZNF668	protein_coding	Intergenic	.	.	Alu	0.15
16	31121221	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0714286
16	31121260	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.0425532
16	31121673	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.047619
16	31121776	A->G	+	ENSG00000103510	KAT8	protein_coding	Intergenic	.	.	Alu	0.227273
16	31122809	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.2
16	31123438	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intergenic	.	.	Alu	0.125
16	31358481	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.463415
16	31358508	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0441176
16	31358522	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.148649
16	31359000	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.14094
16	31359201	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0875912
16	31359238	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0346821
16	31359249	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0888889
16	31359346	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.030303
16	31359349	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0280374
16	31363516	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.172414
16	31363521	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0925926
16	31363526	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0384615
16	31363527	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.125
16	31363540	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.309524
16	31363547	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.413043
16	31363563	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0769231
16	31363575	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.162162
16	31363585	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0909091
16	31363625	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.166667
16	31363634	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.176471
16	31363679	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.173913
16	31363706	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0294118
16	31363707	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.185714
16	31364241	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.274194
16	31364265	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0483871
16	31364273	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0555556
16	31364307	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.333333
16	31364342	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.139535
16	31364347	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.146341
16	31364352	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.333333
16	31364763	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0408163
16	31364826	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.142857
16	31365787	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0769231
16	31365800	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.137931
16	31365812	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.125
16	31365844	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0731707
16	31365848	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0714286
16	31366555	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0810811
16	31366569	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.702128
16	31366616	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.25
16	31366633	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.104167
16	31366645	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0666667
16	31366655	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.577778
16	31366657	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.266667
16	31366696	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.08
16	31366699	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0769231
16	31366730	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.8
16	31366751	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.34
16	31368244	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.272727
16	31368247	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.21875
16	31368251	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.34375
16	31368279	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.1
16	31368284	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.1
16	31368287	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.170732
16	31368293	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.394737
16	31368312	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.644444
16	31368342	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.06
16	31368377	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.183673
16	31368378	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.208333
16	31368383	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.416667
16	31368387	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.177778
16	31368391	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.18
16	31368400	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.104167
16	31368404	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0555556
16	31368463	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.121951
16	31372815	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.1
16	31374103	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.2
16	31374557	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.416667
16	31374573	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.176471
16	31374652	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.125
16	31375116	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.142857
16	31375133	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.142857
16	31376505	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.181818
16	31377882	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.0789474
16	31377902	A->G	+	ENSG00000140678	ITGAX	protein_coding	Intergenic	.	.	Alu	0.097561
16	31891501	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.307692
16	31891718	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.363636
16	31891753	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.214286
16	31891754	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.214286
16	31892120	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.142857
16	31892121	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.190476
16	31892250	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.235294
16	31892271	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.142857
16	31892287	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.130435
16	31892310	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.409091
16	31892381	A->G	+	ENSG00000185947	ZNF267	protein_coding	Intergenic	.	.	Alu	0.384615
16	46661084	A->G	-	ENSG00000261131	AC012186.2	sense_intronic	Intergenic	.	.	Alu	0.166667
16	46661326	A->G	-	ENSG00000261131	AC012186.2	sense_intronic	Intergenic	.	.	Alu	0.333333
16	48559529	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.101695
16	48593799	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.153846
16	48604354	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.0606061
16	48605170	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.176471
16	48608276	A->G	-	ENSG00000102921	N4BP1	protein_coding	Intergenic	.	.	Alu	0.142857
16	50033721	A->G	+	ENSG00000205423	CNEP1R1	protein_coding	Intergenic	.	.	Alu	0.461538
16	50033743	A->G	+	ENSG00000205423	CNEP1R1	protein_coding	Intergenic	.	.	Alu	0.6
16	50164895	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.2
16	50221085	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.1
16	50221198	A->G	+	ENSG00000121274	TENT4B	protein_coding	Intergenic	.	.	Alu	0.133333
16	50268179	A->G	+	ENSG00000121281	ADCY7	protein_coding	Intergenic	.	.	Alu	0.181818
16	50674388	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.0909091
16	50674494	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.176471
16	50674521	A->G	-	ENSG00000167208	SNX20	protein_coding	Intergenic	.	.	Alu	0.0909091
16	50746177	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.166667
16	50749046	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.166667
16	50749055	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.125
16	50749108	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.230769
16	50749147	A->G	+	ENSG00000083799	CYLD	protein_coding	Intergenic	.	.	Alu	0.111111
16	53100694	A->G	+	ENSG00000177200	CHD9	protein_coding	Intergenic	.	.	Alu	0.166667
16	53102668	A->G	+	ENSG00000177200	CHD9	protein_coding	Intergenic	.	.	Alu	0.333333
16	53105082	A->G	+	ENSG00000177200	CHD9	protein_coding	Intergenic	.	.	Alu	0.181818
16	53467452	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.3
16	53467457	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.4
16	53467610	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.166667
16	53467623	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.266667
16	53467662	A->G	+	ENSG00000103479	RBL2	protein_coding	Intergenic	.	.	Alu	0.2
16	56940406	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.371795
16	56940446	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.145455
16	56940472	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0392157
16	56940479	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.259259
16	56940516	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.323529
16	56940541	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.125
16	56940553	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0714286
16	56940577	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.1
16	56940580	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.263158
16	56940706	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.114286
16	56940707	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0857143
16	56940811	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0327869
16	56940812	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0508475
16	56940813	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0677966
16	56940816	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.0363636
16	56940859	A->G	+	ENSG00000261270	AC012181.2	sense_intronic	Intergenic	.	.	Alu	0.181818
16	57056307	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.227273
16	57056322	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.454545
16	57056370	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.222222
16	57056391	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.175
16	57056403	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.638889
16	57056408	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.0571429
16	57056420	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.0625
16	57056430	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.83871
16	57056487	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.0666667
16	57056499	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.214286
16	57056510	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.3
16	57056511	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.206897
16	57056512	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.25
16	57056543	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.0666667
16	57056557	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.107143
16	57056678	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.1875
16	57056710	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.416667
16	57056714	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.166667
16	57056723	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.3
16	57056733	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.384615
16	57056738	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.272727
16	57056759	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.2
16	57056763	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.181818
16	57056920	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.117647
16	57056933	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.157895
16	57057356	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.272727
16	57057373	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.411765
16	57057404	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.0769231
16	57057411	A->G	+	ENSG00000260145	AC023825.2	antisense	Intergenic	.	.	Alu	0.384615
16	57177895	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.6
16	57177975	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.5
16	57177983	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.181818
16	57177991	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.181818
16	57183612	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.25
16	57183619	A->G	-	ENSG00000172775	FAM192A	protein_coding	Intergenic	.	.	Alu	0.7
16	58617278	A->G	-	ENSG00000125107	CNOT1	protein_coding	Intergenic	.	.	Alu	0.2
16	67041552	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.181818
16	67048949	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.2
16	67072896	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.190476
16	67072947	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.228571
16	67072948	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.142857
16	67072949	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.114286
16	67072981	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.103448
16	67073483	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.133333
16	67073870	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.111111
16	67073954	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.166667
16	67073978	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.153846
16	67074642	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.142857
16	67074643	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.142857
16	67074655	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.388889
16	67074968	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.25
16	67078449	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.181818
16	67078497	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.157895
16	67078498	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.5
16	67078749	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.117647
16	67078750	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.444444
16	67078767	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.2
16	67078779	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.105263
16	67078856	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.5
16	67078921	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.133333
16	67081620	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.181818
16	67081877	A->G	+	ENSG00000067955	CBFB	protein_coding	Intergenic	.	.	Alu	0.166667
16	67476810	A->G	-	ENSG00000159720	ATP6V0D1	protein_coding	Intergenic	.	.	Alu	0.166667
16	67591987	A->G	+	ENSG00000102974	CTCF	protein_coding	Intergenic	.	.	Alu	0.2
16	67991611	A->G	-	ENSG00000167261	DPEP2	protein_coding	Intergenic	.	.	Alu	0.2
16	68304904	A->G	-	ENSG00000103061	SLC7A6OS	protein_coding	Intergenic	.	.	Alu	0.2
16	69135593	A->G	+	ENSG00000141076	UTP4	protein_coding	Intergenic	.	.	Alu	0.3
16	70543260	A->G	+	ENSG00000189091	SF3B3	protein_coding	Intergenic	.	.	Alu	0.181818
16	70543263	A->G	+	ENSG00000189091	SF3B3	protein_coding	Intergenic	.	.	Alu	0.181818
16	71925703	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.3
16	71925708	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.181818
16	71925880	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.2
16	71926473	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.181818
16	71927238	A->G	+	ENSG00000182149	IST1	protein_coding	Intergenic	.	.	Alu	0.153846
16	74298715	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.0571429
16	74298731	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.08
16	74299428	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.5
16	74299483	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.210526
16	74299525	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.133333
16	74302622	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.222222
16	74303822	A->G	+	ENSG00000103035	PSMD7	protein_coding	Intergenic	.	.	Alu	0.105263
16	74363483	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.4
16	74363667	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.428571
16	74364146	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
16	74364506	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.555556
16	74365721	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
16	74365765	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
16	74366202	A->G	-	ENSG00000214331	AC009053.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
16	75648962	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.08
16	75649102	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.16
16	75650693	A->G	+	ENSG00000166848	TERF2IP	protein_coding	Intergenic	.	.	Alu	0.2
16	84978815	A->G	-	ENSG00000153786	ZDHHC7	protein_coding	Intergenic	.	.	Alu	0.2
16	85069046	A->G	+	ENSG00000135709	KIAA0513	protein_coding	Intergenic	.	.	Alu	0.272727
16	85069054	A->G	+	ENSG00000135709	KIAA0513	protein_coding	Intergenic	.	.	Alu	0.4
16	87396423	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	Intergenic	.	.	Alu	0.153846
16	87396957	A->G	+	ENSG00000261592	AC010531.3	antisense	Intergenic	.	.	Alu	0.2
16	87827663	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
16	87827841	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
16	87827845	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
16	87827904	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
16	87865997	A->G	-	ENSG00000103257	SLC7A5	protein_coding	Intergenic	.	.	Alu	0.0714286
16	87866439	A->G	-	ENSG00000103257	SLC7A5	protein_coding	Intergenic	.	.	Alu	0.0416667
16	87866526	A->G	-	ENSG00000103257	SLC7A5	protein_coding	Intergenic	.	.	Alu	0.15
16	87867926	A->G	-	ENSG00000103257	SLC7A5	protein_coding	Intergenic	.	.	Alu	0.166667
16	88501251	A->G	+	ENSG00000179588	ZFPM1	protein_coding	Intergenic	.	.	Alu	0.9375
16	88501465	A->G	+	ENSG00000179588	ZFPM1	protein_coding	Intergenic	.	.	Alu	0.4375
16	88501529	A->G	+	ENSG00000179588	ZFPM1	protein_coding	Intergenic	.	.	Alu	0.235294
16	88528777	A->G	+	ENSG00000261744	AC116552.1	antisense	Intergenic	.	.	Alu	0.538462
16	88528792	A->G	+	ENSG00000261744	AC116552.1	antisense	Intergenic	.	.	Alu	0.0952381
16	88528821	A->G	+	ENSG00000261744	AC116552.1	antisense	Intergenic	.	.	Alu	0.105263
16	88529025	A->G	+	ENSG00000261744	AC116552.1	antisense	Intergenic	.	.	Alu	0.103448
16	88647359	A->G	-	ENSG00000051523	CYBA	protein_coding	Intergenic	.	.	Alu	0.0833333
16	89415688	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.363636
16	89415706	A->G	-	ENSG00000167522	ANKRD11	protein_coding	Intergenic	.	.	Alu	0.2
16	89515289	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.272727
16	89515290	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.181818
16	89515343	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.153846
16	89515363	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.3
16	89515369	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.2
16	89515807	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.181818
16	89515847	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.363636
16	89515943	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.133333
16	89515970	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.1875
16	89515971	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.25
16	89516036	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.461538
16	89516057	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.214286
16	89516358	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.2
16	89516409	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.545455
16	89516503	A->G	+	ENSG00000197912	SPG7	protein_coding	Intergenic	.	.	Alu	0.2
16	89650547	A->G	-	ENSG00000131165	CHMP1A	protein_coding	Intergenic	.	.	Alu	0.117647
16	89650589	A->G	-	ENSG00000131165	CHMP1A	protein_coding	Intergenic	.	.	Alu	0.181818
16	89651288	A->G	-	ENSG00000131165	CHMP1A	protein_coding	Intergenic	.	.	Alu	0.133333
16	89651308	A->G	-	ENSG00000131165	CHMP1A	protein_coding	Intergenic	.	.	Alu	0.166667
16	89724445	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.16129
16	89724465	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.258065
16	89724527	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.0555556
16	89724588	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.0333333
16	89725114	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.08
16	89725248	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.111111
16	89725382	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.142857
16	89726217	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.0833333
16	89726380	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.111111
16	89726383	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.111111
16	89734510	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.214286
16	89734512	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.214286
16	89734958	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.2
16	89735637	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.454545
16	89735638	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.181818
16	89735809	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.133333
16	89735832	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.2
16	89736019	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.210526
16	89736021	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.157895
16	89736098	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.277778
16	89736168	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.2
16	89736895	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.0645161
16	89737305	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.153846
16	89737310	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.153846
16	89737356	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.230769
16	89737359	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.166667
16	89737441	A->G	+	ENSG00000158805	ZNF276	protein_coding	Intergenic	.	.	Alu	0.133333
16	89872325	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
16	89977086	A->G	+	ENSG00000223959	AFG3L1P	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.25
17	16012613	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.2
17	16012638	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.2
17	16012639	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.4
17	16012800	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.130435
17	16013130	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.142857
17	16013149	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.125
17	16018600	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.153846
17	16018619	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.125
17	16018636	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.176471
17	16018705	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.277778
17	16020692	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.666667
17	16020693	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.583333
17	16020888	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.333333
17	16020950	A->G	+	ENSG00000011295	TTC19	protein_coding	Intergenic	.	.	Alu	0.230769
17	16382990	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	16383267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	16383273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	16383938	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
17	16383961	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
17	17272786	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.363636
17	17277556	A->G	-	ENSG00000141030	COPS3	protein_coding	Intergenic	.	.	Alu	0.25
17	18095089	A->G	+	ENSG00000108591	DRG2	protein_coding	Intergenic	.	.	Alu	0.2
17	18095095	A->G	+	ENSG00000108591	DRG2	protein_coding	Intergenic	.	.	Alu	0.2
17	18272232	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.357143
17	18272248	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.545455
17	18306078	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.181818
17	18306102	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.153846
17	18306422	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intergenic	.	.	Alu	0.3
17	18321584	A->G	+	ENSG00000176994	SMCR8	protein_coding	Intergenic	.	.	Alu	0.2
17	18651641	A->G	+	ENSG00000189375	TBC1D28	protein_coding	Intergenic	.	.	Alu	0.545455
17	27297690	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.25
17	27297691	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.25
17	27300790	A->G	+	ENSG00000109046	WSB1	protein_coding	Intergenic	.	.	Alu	0.2
17	28600196	A->G	+	ENSG00000227543	SPAG5-AS1	processed_transcript	Intergenic	.	.	Alu	0.181818
17	28666608	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.6
17	28672624	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.166667
17	28672949	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.142857
17	28672990	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.111111
17	28673076	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.285714
17	28673097	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intergenic	.	.	Alu	0.142857
17	28721950	A->G	+	ENSG00000264577	AC010761.1	antisense	Intergenic	.	.	Alu	0.166667
17	28722066	A->G	+	ENSG00000264577	AC010761.1	antisense	Intergenic	.	.	Alu	0.0909091
17	28932413	A->G	-	ENSG00000109118	PHF12	protein_coding	Intergenic	.	.	Alu	0.454545
17	29279714	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.25
17	29279901	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
17	29280045	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
17	29280829	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
17	29289115	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.105263
17	29290102	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.2
17	29290452	A->G	-	ENSG00000108256	NUFIP2	protein_coding	Intergenic	.	.	Alu	0.368421
17	29565004	A->G	-	ENSG00000168792	ABHD15	protein_coding	Intergenic	.	.	Alu	0.3
17	29565011	A->G	-	ENSG00000168792	ABHD15	protein_coding	Intergenic	.	.	Alu	0.181818
17	29565134	A->G	-	ENSG00000168792	ABHD15	protein_coding	Intergenic	.	.	Alu	0.333333
17	29565530	A->G	-	ENSG00000168792	ABHD15	protein_coding	Intergenic	.	.	Alu	0.3
17	29673494	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.4
17	29673508	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.230769
17	29673510	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.545455
17	29673513	A->G	-	ENSG00000264031	ABHD15-AS1	antisense	Intergenic	.	.	Alu	0.25
17	29749758	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29749851	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.266667
17	29749864	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.272727
17	29749983	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.2
17	29750781	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.1875
17	29751363	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.117647
17	29751411	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.210526
17	29753161	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.111111
17	29753193	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.818182
17	29753199	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.125
17	29753268	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.3
17	29753779	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.285714
17	29753787	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.3
17	29756803	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.153846
17	29756861	A->G	-	ENSG00000141298	SSH2	protein_coding	Intergenic	.	.	Alu	0.117647
17	31875723	A->G	-	ENSG00000108651	UTP6	protein_coding	Intergenic	.	.	Alu	0.166667
17	31876936	A->G	-	ENSG00000108651	UTP6	protein_coding	Intergenic	.	.	Alu	0.727273
17	31876949	A->G	-	ENSG00000108651	UTP6	protein_coding	Intergenic	.	.	Alu	0.25
17	31876950	A->G	-	ENSG00000108651	UTP6	protein_coding	Intergenic	.	.	Alu	0.166667
17	32450141	A->G	+	ENSG00000108671	PSMD11	protein_coding	Intergenic	.	.	Alu	0.142857
17	34965029	A->G	+	ENSG00000132141	CCT6B	protein_coding	Intergenic	.	.	Alu	0.2
17	34965035	A->G	+	ENSG00000132141	CCT6B	protein_coding	Intergenic	.	.	Alu	0.5
17	35261876	A->G	+	ENSG00000166750	SLFN5	protein_coding	Intergenic	.	.	Alu	0.2
17	35261879	A->G	+	ENSG00000166750	SLFN5	protein_coding	Intergenic	.	.	Alu	0.25
17	35448964	A->G	-	.	.	.	Intergenic	.	.	Alu	0.136364
17	35449139	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
17	35449156	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	35467948	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.613636
17	35468061	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.588235
17	35468074	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.111111
17	35468077	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.133333
17	35468078	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.133333
17	35468081	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.133333
17	35468183	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.0769231
17	35468197	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.586207
17	35468775	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.137931
17	35468785	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.342857
17	35468796	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.108108
17	35468850	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.291667
17	35468861	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.136364
17	35468868	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.08
17	35468892	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.235294
17	35468897	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.125
17	35468904	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.235294
17	35468907	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.388889
17	35468994	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.421053
17	35471163	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.06
17	35471164	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.04
17	35471166	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.0434783
17	35471205	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.0697674
17	35471233	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.0851064
17	35471234	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.104167
17	35471274	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.139535
17	35471275	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.139535
17	35471330	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.0444444
17	35471332	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.0454545
17	35471409	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.125
17	35471691	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.3
17	35488813	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.181818
17	35501138	A->G	-	ENSG00000267074	AC015911.3	sense_intronic	Intergenic	.	.	Alu	0.277778
17	35508471	A->G	-	ENSG00000267074	AC015911.3	sense_intronic	Intergenic	.	.	Alu	0.0952381
17	35508479	A->G	-	ENSG00000267074	AC015911.3	sense_intronic	Intergenic	.	.	Alu	0.111111
17	35511553	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.380952
17	35511627	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.705882
17	35511631	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.125
17	35511654	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.142857
17	35511666	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.190476
17	35511667	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.142857
17	35511742	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.133333
17	35511749	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.153846
17	35512477	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.636364
17	35512498	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.384615
17	35536958	A->G	-	ENSG00000205045	SLFN12L	protein_coding	Intergenic	.	.	Alu	0.153846
17	36954317	A->G	+	ENSG00000275700	AATF	protein_coding	Intergenic	.	.	Alu	0.166667
17	39654351	A->G	+	ENSG00000131748	STARD3	protein_coding	Intergenic	.	.	Alu	0.545455
17	39655279	A->G	+	ENSG00000131748	STARD3	protein_coding	Intergenic	.	.	Alu	0.454545
17	39655286	A->G	+	ENSG00000131748	STARD3	protein_coding	Intergenic	.	.	Alu	0.166667
17	40335634	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.2
17	40335856	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.222222
17	40335869	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.705882
17	40335880	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.3125
17	40335988	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.176471
17	40335994	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.277778
17	40336178	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.333333
17	40336207	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.181818
17	40336219	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.3
17	40352797	A->G	+	ENSG00000131759	RARA	protein_coding	Intergenic	.	.	Alu	0.0363636
17	41851799	A->G	-	.	.	.	Intergenic	.	.	Alu	0.190476
17	41851864	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0909091
17	41852131	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0857143
17	41852176	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
17	41852185	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
17	41852197	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	41852199	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	41852212	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
17	41852213	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	41852216	A->G	-	.	.	.	Intergenic	.	.	Alu	0.555556
17	41852243	A->G	-	.	.	.	Intergenic	.	.	Alu	0.375
17	41852534	A->G	-	.	.	.	Intergenic	.	.	Alu	0.555556
17	41852546	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
17	41852608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
17	41852611	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
17	41852642	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
17	41852643	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
17	41852691	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0588235
17	41982848	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.5
17	41982884	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.545455
17	41982900	A->G	-	ENSG00000168259	DNAJC7	protein_coding	Intergenic	.	.	Alu	0.181818
17	42103060	A->G	-	ENSG00000108771	DHX58	protein_coding	Intergenic	.	.	Alu	0.2
17	42318026	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.153846
17	42328581	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.181818
17	42376737	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.25
17	42384715	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.125
17	42385336	A->G	-	ENSG00000168610	STAT3	protein_coding	Intergenic	.	.	Alu	0.142857
17	42602098	A->G	-	ENSG00000141699	RETREG3	protein_coding	Intergenic	.	.	Alu	0.3
17	42602099	A->G	-	ENSG00000141699	RETREG3	protein_coding	Intergenic	.	.	Alu	0.181818
17	43000929	A->G	+	ENSG00000131469	RPL27	protein_coding	Intergenic	.	.	Alu	0.166667
17	43171917	A->G	+	ENSG00000188554	NBR1	protein_coding	Intergenic	.	.	Alu	0.111111
17	43226489	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.8
17	43226495	A->G	+	ENSG00000236383	LINC00854	protein_coding	Intergenic	.	.	Alu	0.181818
17	43487607	A->G	+	ENSG00000067596	DHX8	protein_coding	Intergenic	.	.	Alu	0.2
17	44208175	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.133333
17	44208201	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.0714286
17	44208242	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.0909091
17	44209045	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.0869565
17	44209047	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.0869565
17	44209106	A->G	-	ENSG00000267394	AC004596.1	antisense	Intergenic	.	.	Alu	0.0769231
17	44347006	A->G	+	ENSG00000030582	GRN	protein_coding	Intergenic	.	.	Alu	0.130435
17	44347302	A->G	+	ENSG00000030582	GRN	protein_coding	Intergenic	.	.	Alu	0.3
17	44679659	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.285714
17	44679704	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.733333
17	44680243	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.25
17	44680261	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.846154
17	44681179	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.166667
17	44681249	A->G	-	ENSG00000180336	MEIOC	protein_coding	Intergenic	.	.	Alu	0.166667
17	44873421	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.181818
17	44873570	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.2
17	44874339	A->G	-	ENSG00000108883	EFTUD2	protein_coding	Intergenic	.	.	Alu	0.272727
17	45217282	A->G	-	ENSG00000267121	AC008105.3	antisense	Intergenic	.	.	Alu	0.2
17	45470870	A->G	-	ENSG00000225190	PLEKHM1	protein_coding	Intergenic	.	.	Alu	0.3
17	47312997	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0375
17	47313018	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0253165
17	47313043	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0441176
17	47313103	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.030303
17	47313610	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0384615
17	47313611	A->G	+	ENSG00000259753	AC068234.1	protein_coding	Intergenic	.	.	Alu	0.0576923
17	48918037	A->G	+	ENSG00000159202	UBE2Z	protein_coding	Intergenic	.	.	Alu	0.5
17	48934805	A->G	-	ENSG00000230532	AC091133.1	antisense	Intergenic	.	.	Alu	0.333333
17	48934827	A->G	-	ENSG00000230532	AC091133.1	antisense	Intergenic	.	.	Alu	0.133333
17	48934841	A->G	-	ENSG00000230532	AC091133.1	antisense	Intergenic	.	.	Alu	0.153846
17	48934844	A->G	-	ENSG00000230532	AC091133.1	antisense	Intergenic	.	.	Alu	0.166667
17	48939953	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.2
17	48940158	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.2
17	48940201	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.153846
17	48940223	A->G	-	ENSG00000159210	SNF8	protein_coding	Intergenic	.	.	Alu	0.2
17	49221052	A->G	+	ENSG00000108798	ABI3	protein_coding	Intergenic	.	.	Alu	0.727273
17	49221053	A->G	+	ENSG00000108798	ABI3	protein_coding	Intergenic	.	.	Alu	0.272727
17	49221058	A->G	+	ENSG00000108798	ABI3	protein_coding	Intergenic	.	.	Alu	0.166667
17	49221066	A->G	+	ENSG00000108798	ABI3	protein_coding	Intergenic	.	.	Alu	0.363636
17	49221094	A->G	+	ENSG00000108798	ABI3	protein_coding	Intergenic	.	.	Alu	0.2
17	50724453	A->G	+	ENSG00000108848	LUC7L3	protein_coding	Intergenic	.	.	Alu	0.153846
17	51032364	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51032701	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.6
17	51032851	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.3
17	51032895	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.363636
17	51032896	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.166667
17	51037200	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.153846
17	51037465	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.111111
17	51107868	A->G	-	ENSG00000008294	SPAG9	protein_coding	Intergenic	.	.	Alu	0.2
17	51190998	A->G	-	ENSG00000011258	MBTD1	protein_coding	Intergenic	.	.	Alu	0.2
17	58342812	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.166667
17	58343331	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.181818
17	58343340	A->G	+	ENSG00000265148	TSPOAP1-AS1	antisense	Intergenic	.	.	Alu	0.181818
17	59693279	A->G	+	ENSG00000141378	PTRH2	protein_coding	Intergenic	.	.	Alu	0.2
17	59842490	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	59842527	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
17	59842563	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
17	59842603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0666667
17	59842607	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
17	59842610	A->G	+	.	.	.	Intergenic	.	.	Alu	0.225806
17	59842898	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
17	59842914	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0769231
17	59842949	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
17	59842950	A->G	+	.	.	.	Intergenic	.	.	Alu	0.217391
17	59843015	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	59936604	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.384615
17	59936664	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.153846
17	59936695	A->G	+	ENSG00000108443	RPS6KB1	protein_coding	Intergenic	.	.	Alu	0.25
17	60519547	A->G	-	ENSG00000062725	APPBP2	protein_coding	Intergenic	.	.	Alu	0.5
17	62060462	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.2
17	62060498	A->G	-	ENSG00000108510	MED13	protein_coding	Intergenic	.	.	Alu	0.3
17	62589830	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.818182
17	62590753	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.133333
17	62591102	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.181818
17	62591236	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.2
17	62591248	A->G	+	ENSG00000146872	TLK2	protein_coding	Intergenic	.	.	Alu	0.153846
17	63763473	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.25
17	63763518	A->G	-	ENSG00000108588	CCDC47	protein_coding	Intergenic	.	.	Alu	0.166667
17	63836382	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.357143
17	63836386	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.133333
17	63836442	A->G	-	ENSG00000108604	SMARCD2	protein_coding	Intergenic	.	.	Alu	0.142857
17	64470975	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
17	64509294	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.181818
17	64509300	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.416667
17	64509415	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.4
17	64520707	A->G	+	ENSG00000258890	CEP95	protein_coding	Intergenic	.	.	Alu	0.2
17	64813879	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.8
17	64814314	A->G	-	ENSG00000214176	PLEKHM1P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
17	64964467	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	64971059	A->G	-	ENSG00000214174	AMZ2P1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
17	65015022	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.133333
17	65015045	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0571429
17	65015049	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.047619
17	65015066	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.216216
17	65015473	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.125
17	65016566	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0540541
17	65016626	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0566038
17	65016634	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0517241
17	65016635	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.0350877
17	65038160	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.272727
17	65038653	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.5
17	65038699	A->G	-	ENSG00000120063	GNA13	protein_coding	Intergenic	.	.	Alu	0.153846
17	65052291	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.166667
17	65052864	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.16
17	65052883	A->G	-	ENSG00000266598	AC037487.2	antisense	Intergenic	.	.	Alu	0.166667
17	67352257	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67354324	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.26087
17	67354358	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.157895
17	67357957	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.3125
17	67358086	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67358091	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.153846
17	67358103	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.133333
17	67358105	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1
17	67358116	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.115385
17	67358142	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.12
17	67358195	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.571429
17	67358196	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.214286
17	67358309	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.272727
17	67358322	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.545455
17	67358350	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.1875
17	67358376	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.222222
17	67358381	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.647059
17	67358419	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.117647
17	67358424	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.3125
17	67358440	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.153846
17	67358446	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.181818
17	67363300	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.125
17	67363966	A->G	-	ENSG00000197170	PSMD12	protein_coding	Intergenic	.	.	Alu	0.0869565
17	67898254	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.133333
17	67905449	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.166667
17	67905452	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.166667
17	67906949	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.272727
17	67906982	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.428571
17	67907014	A->G	+	ENSG00000171634	BPTF	protein_coding	Intergenic	.	.	Alu	0.416667
17	68038649	A->G	+	ENSG00000182481	KPNA2	protein_coding	Intergenic	.	.	Alu	0.2
17	68108707	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
17	68109187	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
17	68119710	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	68122360	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
17	68122420	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
17	68124542	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	68126233	A->G	+	ENSG00000267023	LRRC37A16P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0333333
17	68209721	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
17	68209760	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
17	68209801	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
17	68209811	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
17	68209821	A->G	+	.	.	.	Intergenic	.	.	Alu	0.375
17	68210679	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
17	68210766	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
17	68270305	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.26087
17	68270311	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.111111
17	68270388	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.153846
17	68275725	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.3
17	68275737	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.181818
17	68280868	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0769231
17	68280908	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.15
17	68280958	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.230769
17	68280962	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.153846
17	68280982	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.3125
17	68281004	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.428571
17	68281026	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.166667
17	68281074	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.285714
17	68281095	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.181818
17	68285522	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.3
17	68286783	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0740741
17	68288273	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.166667
17	68289124	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.0625
17	68289128	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.151515
17	68289236	A->G	-	ENSG00000141337	ARSG	protein_coding	Intergenic	.	.	Alu	0.114286
17	73204147	A->G	+	ENSG00000166685	COG1	protein_coding	Intergenic	.	.	Alu	0.230769
17	73204148	A->G	+	ENSG00000166685	COG1	protein_coding	Intergenic	.	.	Alu	0.166667
17	73204151	A->G	+	ENSG00000166685	COG1	protein_coding	Intergenic	.	.	Alu	0.153846
17	74208886	A->G	+	ENSG00000172809	RPL38	protein_coding	Intergenic	.	.	Alu	0.15
17	74468356	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.214286
17	74468376	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.111111
17	74468407	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.115385
17	74468432	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.521739
17	74468433	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.48
17	74468451	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.136364
17	74468462	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.136364
17	74468472	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.45
17	74468516	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.105263
17	74468522	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.166667
17	74468530	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.235294
17	74468567	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.0833333
17	74468568	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.0833333
17	74468596	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.181818
17	74468726	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.137931
17	74468756	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.1
17	74468757	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.0645161
17	74468838	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.173913
17	74468868	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.318182
17	74468892	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.12
17	74469241	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.210526
17	74469268	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.470588
17	74469281	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.416667
17	74469307	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.583333
17	74469308	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.153846
17	74469313	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.25
17	74469815	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.166667
17	74472679	A->G	+	ENSG00000167851	CD300A	protein_coding	Intergenic	.	.	Alu	0.3
17	74620870	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.117647
17	74622076	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0714286
17	74622077	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0943396
17	74622083	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.155556
17	74622121	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.147059
17	74622308	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0697674
17	74622315	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.126582
17	74622326	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0277778
17	74622339	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0416667
17	74622343	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0337079
17	74622346	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.173913
17	74622350	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0425532
17	74622352	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0697674
17	74622365	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.03
17	74622404	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0416667
17	74622405	A->G	-	ENSG00000186407	CD300E	protein_coding	Intergenic	.	.	Alu	0.0210526
17	74701665	A->G	-	ENSG00000172794	RAB37	protein_coding	Intergenic	.	.	Alu	0.142857
17	74782320	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.357143
17	74782330	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.133333
17	74782336	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.466667
17	74782874	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.4
17	74782875	A->G	+	ENSG00000109066	TMEM104	protein_coding	Intergenic	.	.	Alu	0.2
17	75104724	A->G	+	ENSG00000170190	SLC16A5	protein_coding	Intergenic	.	.	Alu	0.133333
17	75179924	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.181818
17	75180084	A->G	-	ENSG00000188612	SUMO2	protein_coding	Intergenic	.	.	Alu	0.117647
17	75323072	A->G	-	ENSG00000177885	GRB2	protein_coding	Intergenic	.	.	Alu	0.25
17	75519632	A->G	+	ENSG00000182173	TSEN54	protein_coding	Intergenic	.	.	Alu	0.230769
17	75520479	A->G	+	ENSG00000182173	TSEN54	protein_coding	Intergenic	.	.	Alu	0.25
17	75520807	A->G	+	ENSG00000182173	TSEN54	protein_coding	Intergenic	.	.	Alu	0.214286
17	75528583	A->G	+	ENSG00000073350	LLGL2	protein_coding	Intergenic	.	.	Alu	0.166667
17	75528690	A->G	+	ENSG00000073350	LLGL2	protein_coding	Intergenic	.	.	Alu	0.3
17	75682798	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.2
17	75682801	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.2
17	75683227	A->G	+	ENSG00000161526	SAP30BP	protein_coding	Intergenic	.	.	Alu	0.2
17	76482973	A->G	-	ENSG00000129667	RHBDF2	protein_coding	Intergenic	.	.	Alu	0.333333
17	76488255	A->G	-	ENSG00000129667	RHBDF2	protein_coding	Intergenic	.	.	Alu	0.181818
17	76489043	A->G	-	ENSG00000129667	RHBDF2	protein_coding	Intergenic	.	.	Alu	0.166667
17	76496354	A->G	-	ENSG00000129667	RHBDF2	protein_coding	Intergenic	.	.	Alu	0.0857143
17	76514810	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0645161
17	76514824	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
17	76515124	A->G	-	.	.	.	Intergenic	.	.	Alu	0.06
17	76516440	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
17	76516453	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
17	76516692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.380952
17	76717630	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0526316
17	76717674	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.2
17	76717682	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0645161
17	76717922	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.3
17	76719468	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0465116
17	76719471	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.204545
17	76719516	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0769231
17	76719531	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.458333
17	76719887	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0714286
17	76719896	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.153846
17	76720005	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0606061
17	76720106	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.121951
17	76722595	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0666667
17	76722611	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0615385
17	76722629	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.269841
17	76722680	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.075
17	76722688	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0625
17	76722738	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76722746	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0571429
17	76722799	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0512821
17	76723035	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.352941
17	76723070	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.157895
17	76723074	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0952381
17	76723106	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0465116
17	76723149	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0512821
17	76723225	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0952381
17	76723713	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.326087
17	76723714	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.173913
17	76724183	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.121212
17	76724199	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.15
17	76724238	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0625
17	76724259	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0447761
17	76724260	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0606061
17	76724282	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.166667
17	76724286	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.253968
17	76724298	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.031746
17	76724301	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.047619
17	76724330	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0877193
17	76724367	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0517241
17	76724402	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0625
17	76725296	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0625
17	76725323	A->G	-	ENSG00000070495	JMJD6	protein_coding	Intergenic	.	.	Alu	0.0689655
17	76727435	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.0540541
17	76727811	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.0909091
17	76728058	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.1875
17	76728093	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.125
17	76728322	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.214286
17	76728366	A->G	+	ENSG00000181038	METTL23	protein_coding	Intergenic	.	.	Alu	0.333333
17	76782084	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
17	77152075	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.142857
17	77152090	A->G	+	ENSG00000129657	SEC14L1	protein_coding	Intergenic	.	.	Alu	0.428571
17	77987805	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.363636
17	77987806	A->G	+	ENSG00000078687	TNRC6C	protein_coding	Intergenic	.	.	Alu	0.416667
17	78404340	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.230769
17	78404351	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78404410	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.266667
17	78422522	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.259259
17	78422530	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.208333
17	78422597	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0625
17	78422615	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.285714
17	78422627	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.172414
17	78422637	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78422639	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.533333
17	78422645	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0769231
17	78422650	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0909091
17	78422709	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.294118
17	78422758	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78422912	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.269231
17	78422940	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.0869565
17	78422941	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.173913
17	78422985	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.833333
17	78422998	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78423002	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.333333
17	78423008	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.214286
17	78423038	A->G	+	ENSG00000087157	PGS1	protein_coding	Intergenic	.	.	Alu	0.1
17	78689474	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.25
17	78699972	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.166667
17	78702897	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.4
17	78763852	A->G	-	ENSG00000108669	CYTH1	protein_coding	Intergenic	.	.	Alu	0.142857
17	78791838	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0689655
17	78791850	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0714286
17	78809787	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0909091
17	78810412	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.130435
17	78810522	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.235294
17	78812525	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.210526
17	78816242	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0606061
17	78816257	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0625
17	78816271	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.46875
17	78816298	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.461538
17	78816320	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.210526
17	78816367	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.368421
17	78816543	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.185185
17	78816741	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0625
17	78816765	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0526316
17	78818071	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0571429
17	78831604	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.157895
17	78831686	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.105263
17	78833367	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.25
17	78833384	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.111111
17	78834030	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0740741
17	78834139	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.0714286
17	78834211	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.111111
17	78834584	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.181818
17	78834737	A->G	-	ENSG00000055483	USP36	protein_coding	Intergenic	.	.	Alu	0.1
17	80292342	A->G	+	ENSG00000173821	RNF213	protein_coding	Intergenic	.	.	Alu	0.181818
17	80292350	A->G	+	ENSG00000173821	RNF213	protein_coding	Intergenic	.	.	Alu	0.2
17	80293135	A->G	+	ENSG00000173821	RNF213	protein_coding	Intergenic	.	.	Alu	0.181818
17	80378945	A->G	+	ENSG00000263069	AC124319.2	antisense	Intergenic	.	.	Alu	0.521739
17	80379112	A->G	+	ENSG00000263069	AC124319.2	antisense	Intergenic	.	.	Alu	0.363636
17	81560650	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.142857
17	81561054	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.2
17	81561055	A->G	-	ENSG00000182446	NPLOC4	protein_coding	Intergenic	.	.	Alu	0.181818
17	81857232	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.142857
17	81857312	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.153846
17	81857315	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.153846
17	81857316	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.153846
17	81858025	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.153846
17	81858123	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.181818
17	81858124	A->G	-	ENSG00000185624	P4HB	protein_coding	Intergenic	.	.	Alu	0.181818
17	81881217	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
17	81881229	A->G	-	.	.	.	Intergenic	.	.	Alu	0.571429
17	81881230	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
17	81881294	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	81881341	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
17	81881351	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
17	81881378	A->G	-	.	.	.	Intergenic	.	.	Alu	0.384615
17	81882166	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
17	81882178	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
17	81886760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	81886871	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
17	82256293	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.105263
17	82256299	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.1
17	82256340	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.125
17	82257098	A->G	-	ENSG00000141526	SLC16A3	protein_coding	Intergenic	.	.	Alu	0.166667
17	82262936	A->G	-	ENSG00000141551	CSNK1D	protein_coding	Intergenic	.	.	Alu	0.125
17	82460939	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.588235
17	82460947	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.142857
17	82460953	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.466667
17	82461032	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.1
17	82461041	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.157895
17	82461044	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.35
17	82461054	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.294118
17	82461186	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.181818
17	82461430	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.235294
17	82461482	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.142857
17	82461491	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.391304
17	82461532	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.461538
17	82466556	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.125
17	82467609	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.4
17	82467644	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.375
17	82467646	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.235294
17	82467685	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.238095
17	82467688	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.15
17	82467704	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.263158
17	82467778	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.0909091
17	82468056	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.423077
17	82468057	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.615385
17	82468062	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.12
17	82468191	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.3
17	82468374	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.214286
17	82477583	A->G	+	ENSG00000141562	NARF	protein_coding	Intergenic	.	.	Alu	0.4
17	82482817	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.157895
17	82482870	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.217391
17	82482873	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.227273
17	82482895	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.166667
17	82482899	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.130435
17	82482912	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.111111
17	82482924	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.214286
17	82482934	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.3125
17	82482936	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.1875
17	82483154	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.153846
17	82483166	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intergenic	.	.	Alu	0.272727
17	82626450	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.363636
17	82628026	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.727273
17	82628060	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.416667
17	82628113	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.545455
17	82628220	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.125
17	82628230	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.6
17	82628248	A->G	-	ENSG00000141580	WDR45B	protein_coding	Intergenic	.	.	Alu	0.230769
17	83124732	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
18	11890582	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intergenic	.	.	Alu	0.6
18	11890583	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intergenic	.	.	Alu	0.3
18	11890604	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intergenic	.	.	Alu	0.25
18	13474353	A->G	+	ENSG00000168675	LDLRAD4	protein_coding	Intergenic	.	.	Alu	0.2
18	13728132	A->G	+	ENSG00000101654	RNMT	protein_coding	Intergenic	.	.	Alu	0.333333
18	21596186	A->G	-	ENSG00000141446	ESCO1	protein_coding	Intergenic	.	.	Alu	0.2
18	23527480	A->G	-	ENSG00000141452	RMC1	protein_coding	Intergenic	.	.	Alu	0.153846
18	23532577	A->G	-	ENSG00000141458	NPC1	protein_coding	Intergenic	.	.	Alu	0.25
18	23532603	A->G	-	ENSG00000141458	NPC1	protein_coding	Intergenic	.	.	Alu	0.181818
18	26081392	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.105263
18	26081455	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.125
18	26081886	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.466667
18	26081892	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.133333
18	26081936	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.0952381
18	26081963	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.111111
18	26082045	A->G	-	ENSG00000141380	SS18	protein_coding	Intergenic	.	.	Alu	0.133333
18	32024540	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.103448
18	32024541	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0714286
18	32024544	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0714286
18	32024558	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0769231
18	32024624	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.318182
18	32024630	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.103448
18	32024669	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.193548
18	32032138	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.384615
18	32032745	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.2
18	32032771	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0952381
18	32032774	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.190476
18	32032791	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.157895
18	32032794	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.190476
18	32038840	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.2
18	32039340	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.266667
18	32045043	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0769231
18	32046962	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0714286
18	32047865	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.129032
18	32047871	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0625
18	32047926	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0740741
18	32047968	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0714286
18	32047972	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0714286
18	32047975	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.148148
18	32051438	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.105263
18	32051452	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.181818
18	32051455	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.1
18	32051790	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.12
18	32051807	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.130435
18	32051940	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.133333
18	32053674	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0952381
18	32053700	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.166667
18	32054303	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.307692
18	32054354	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0714286
18	32054367	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0588235
18	32058394	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.272727
18	32058479	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.2
18	32064706	A->G	+	ENSG00000101695	RNF125	protein_coding	Intergenic	.	.	Alu	0.0689655
18	32098162	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.2
18	32104210	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.181818
18	32108802	A->G	+	ENSG00000263917	AC011825.3	processed_transcript	Intergenic	.	.	Alu	0.2
18	32120063	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.3
18	32120079	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.363636
18	32120418	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.7
18	32121336	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.2
18	32121968	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.2
18	32121969	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.3
18	32121979	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.25
18	32122128	A->G	+	ENSG00000134758	RNF138	protein_coding	Intergenic	.	.	Alu	0.2
18	36022938	A->G	-	ENSG00000141425	RPRD1A	protein_coding	Intergenic	.	.	Alu	0.272727
18	36165610	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.166667
18	36165976	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.315789
18	36165980	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.136364
18	36166012	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.0952381
18	36166072	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.166667
18	36166073	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.125
18	36166082	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.1
18	36166113	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.111111
18	36166175	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.222222
18	36166177	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.111111
18	36166430	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.3
18	36166431	A->G	+	ENSG00000134759	ELP2	protein_coding	Intergenic	.	.	Alu	0.8
18	36793962	A->G	-	ENSG00000134779	TPGS2	protein_coding	Intergenic	.	.	Alu	0.166667
18	45953631	A->G	-	ENSG00000152223	EPG5	protein_coding	Intergenic	.	.	Alu	0.6875
18	46219731	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.181818
18	46219743	A->G	+	ENSG00000152242	C18orf25	protein_coding	Intergenic	.	.	Alu	0.181818
18	47860035	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.4
18	47860050	A->G	-	ENSG00000175387	SMAD2	protein_coding	Intergenic	.	.	Alu	0.363636
18	49388082	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.2
18	49389568	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.166667
18	49389605	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.142857
18	49389608	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.428571
18	49389635	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.214286
18	49389653	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.166667
18	49389661	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.153846
18	49390178	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.266667
18	49390229	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.181818
18	49390260	A->G	-	ENSG00000141627	DYM	protein_coding	Intergenic	.	.	Alu	0.181818
18	57618710	A->G	-	ENSG00000134440	NARS	protein_coding	Intergenic	.	.	Alu	0.363636
18	57619954	A->G	-	ENSG00000134440	NARS	protein_coding	Intergenic	.	.	Alu	0.2
18	58704479	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.133333
18	58704569	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.133333
18	58719020	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.25
18	58736106	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0666667
18	58737202	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.105263
18	58737355	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.125
18	58737438	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.136364
18	58737631	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.363636
18	58737728	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0714286
18	58737792	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.125
18	58737805	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0555556
18	58737818	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0857143
18	58737822	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0588235
18	58737835	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.176471
18	58737844	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0454545
18	58737845	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.0454545
18	58737857	A->G	+	ENSG00000172175	MALT1	protein_coding	Intergenic	.	.	Alu	0.191489
18	63419341	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intergenic	.	.	Alu	0.166667
18	76808309	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.166667
18	76808348	A->G	-	ENSG00000264278	ZNF236-DT	lincRNA	Intergenic	.	.	Alu	0.272727
18	79685038	A->G	+	ENSG00000060069	CTDP1	protein_coding	Intergenic	.	.	Alu	0.583333
19	10272797	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.333333
19	10272809	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.181818
19	10275612	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.105263
19	10275613	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.157895
19	10277948	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0869565
19	10278681	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.1
19	10278742	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.133333
19	10278743	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10279316	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.3
19	10280435	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.166667
19	10280606	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10280639	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.266667
19	10280663	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.15
19	10280669	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.0952381
19	10280670	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.136364
19	10280699	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.157895
19	10281858	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.153846
19	10282168	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10282758	A->G	+	ENSG00000266978	AC011511.2	antisense	Intergenic	.	.	Alu	0.2
19	10364314	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.3
19	10364361	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.111111
19	10364388	A->G	-	ENSG00000105397	TYK2	protein_coding	Intergenic	.	.	Alu	0.142857
19	10394164	A->G	-	ENSG00000105401	CDC37	protein_coding	Intergenic	.	.	Alu	0.0952381
19	10394172	A->G	-	ENSG00000105401	CDC37	protein_coding	Intergenic	.	.	Alu	0.117647
19	10394177	A->G	-	ENSG00000105401	CDC37	protein_coding	Intergenic	.	.	Alu	0.133333
19	10394181	A->G	-	ENSG00000105401	CDC37	protein_coding	Intergenic	.	.	Alu	0.352941
19	10394212	A->G	-	ENSG00000105401	CDC37	protein_coding	Intergenic	.	.	Alu	0.357143
19	10449391	A->G	+	ENSG00000065989	PDE4A	protein_coding	Intergenic	.	.	Alu	0.461538
19	10449418	A->G	+	ENSG00000065989	PDE4A	protein_coding	Intergenic	.	.	Alu	0.454545
19	10449440	A->G	+	ENSG00000065989	PDE4A	protein_coding	Intergenic	.	.	Alu	0.166667
19	10449460	A->G	+	ENSG00000065989	PDE4A	protein_coding	Intergenic	.	.	Alu	0.454545
19	10449988	A->G	+	ENSG00000065989	PDE4A	protein_coding	Intergenic	.	.	Alu	0.272727
19	10510980	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	10511390	A->G	-	.	.	.	Intergenic	.	.	Alu	0.153846
19	10511391	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	10512673	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
19	10658063	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.2
19	10658088	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.2
19	10660895	A->G	+	ENSG00000129351	ILF3	protein_coding	Intergenic	.	.	Alu	0.181818
19	10720602	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	10720693	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.3
19	10722863	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.230769
19	10723941	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.214286
19	10725186	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.181818
19	10733427	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.153846
19	10734554	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.166667
19	10767441	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.2
19	10794639	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.5
19	10794648	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.6
19	10806311	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.2
19	10808020	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.3
19	10808058	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.384615
19	10808068	A->G	+	ENSG00000079805	DNM2	protein_coding	Intergenic	.	.	Alu	0.25
19	10930629	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.166667
19	10930770	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.190476
19	10930790	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.105263
19	10930877	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.0909091
19	10930901	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.125
19	10931032	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intergenic	.	.	Alu	0.2
19	11558524	A->G	-	ENSG00000130165	ELOF1	protein_coding	Intergenic	.	.	Alu	0.272727
19	11567331	A->G	-	ENSG00000198551	ZNF627	protein_coding	Intergenic	.	.	Alu	0.153846
19	11567601	A->G	-	ENSG00000198551	ZNF627	protein_coding	Intergenic	.	.	Alu	0.181818
19	11567932	A->G	-	ENSG00000198551	ZNF627	protein_coding	Intergenic	.	.	Alu	0.105263
19	12172964	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.2
19	12177420	A->G	+	ENSG00000196646	ZNF136	protein_coding	Intergenic	.	.	Alu	0.25
19	12618368	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.230769
19	12625195	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.2
19	12625304	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.181818
19	12625705	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.181818
19	12625906	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.0689655
19	12625987	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.111111
19	12626065	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.166667
19	12626156	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.125
19	12626162	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.125
19	12626624	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.181818
19	12626998	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.272727
19	12627028	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.111111
19	12627029	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.111111
19	12627030	A->G	+	ENSG00000173875	ZNF791	protein_coding	Intergenic	.	.	Alu	0.25
19	12787532	A->G	-	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.0909091
19	12787680	A->G	-	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.125
19	12787809	A->G	-	ENSG00000095066	HOOK2	protein_coding	Intergenic	.	.	Alu	0.166667
19	12941527	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.117647
19	12941536	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.111111
19	12941969	A->G	+	ENSG00000179218	CALR	protein_coding	Intergenic	.	.	Alu	0.0740741
19	13760012	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.1875
19	13760053	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.176471
19	13760054	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.157895
19	13760066	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.142857
19	13760625	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.130435
19	13760672	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.153846
19	13760733	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.117647
19	13760869	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.294118
19	13760872	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.25
19	13760873	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.1875
19	13760898	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.466667
19	13760918	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.153846
19	13760963	A->G	+	ENSG00000104957	CCDC130	protein_coding	Intergenic	.	.	Alu	0.416667
19	13837920	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0344828
19	13838364	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0461538
19	14392792	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.4
19	14399909	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.222222
19	14399939	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.117647
19	14399940	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.352941
19	14399943	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14399980	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.214286
19	14399985	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
19	14400294	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.2
19	14400365	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.25
19	14400388	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.181818
19	14400389	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.363636
19	14400645	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.3125
19	14401003	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.142857
19	14401026	A->G	+	ENSG00000123146	ADGRE5	protein_coding	Intergenic	.	.	Alu	0.08
19	14414853	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.25
19	14414913	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.615385
19	14415990	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.0740741
19	14416068	A->G	-	ENSG00000123136	DDX39A	protein_coding	Intergenic	.	.	Alu	0.1
19	14744673	A->G	-	ENSG00000127507	ADGRE2	protein_coding	Intergenic	.	.	Alu	0.214286
19	14744674	A->G	-	ENSG00000127507	ADGRE2	protein_coding	Intergenic	.	.	Alu	0.214286
19	14744727	A->G	-	ENSG00000127507	ADGRE2	protein_coding	Intergenic	.	.	Alu	0.142857
19	15262679	A->G	-	ENSG00000141867	BRD4	protein_coding	Intergenic	.	.	Alu	0.2
19	15338396	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	15395408	A->G	-	ENSG00000011243	AKAP8L	protein_coding	Intergenic	.	.	Alu	0.2
19	15462236	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.0689655
19	15462374	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.2
19	15463289	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.3
19	15463296	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.25
19	15463297	A->G	-	ENSG00000105122	RASAL3	protein_coding	Intergenic	.	.	Alu	0.363636
19	16080539	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.060241
19	16080564	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0227273
19	16080578	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.02
19	16080624	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0210526
19	16080659	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0240964
19	16080660	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0352941
19	16080662	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0352941
19	16080750	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0444444
19	16080761	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0454545
19	16081436	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.103448
19	16082364	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0588235
19	16082400	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0689655
19	16082418	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.151515
19	16082806	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0769231
19	16082941	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0454545
19	16083387	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.037037
19	16083391	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0862069
19	16083403	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0555556
19	16083798	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16083908	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.15625
19	16083996	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16084004	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16084052	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0588235
19	16084053	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0857143
19	16084056	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.135135
19	16084066	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.282051
19	16084092	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16084103	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.152542
19	16084118	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.140351
19	16084134	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.506667
19	16085119	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0714286
19	16085178	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0526316
19	16085216	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0666667
19	16085814	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0454545
19	16091232	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.25
19	16091272	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.222222
19	16091274	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.166667
19	16091613	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.1
19	16092665	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.111111
19	16093027	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16093028	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.0645161
19	16099180	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.142857
19	16099221	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.2
19	16099419	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.2
19	16099428	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.2
19	16099509	A->G	+	ENSG00000167460	TPM4	protein_coding	Intergenic	.	.	Alu	0.153846
19	16147223	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.214286
19	16147256	A->G	+	ENSG00000196684	HSH2D	protein_coding	Intergenic	.	.	Alu	0.1875
19	16556137	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.2
19	16557466	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.125
19	16557847	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.125
19	16558866	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.2
19	16558898	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.333333
19	16558934	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.25
19	16558971	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.142857
19	16559040	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.117647
19	16559375	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.25
19	16559435	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.375
19	16559552	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	16559558	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.1
19	16559609	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.111111
19	16559638	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.142857
19	16559646	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.583333
19	16561931	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	16561944	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	16561966	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0689655
19	16562806	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.45
19	16562811	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	16562847	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.363636
19	16562891	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16562981	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.136364
19	16563056	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.16
19	16563077	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.166667
19	16563095	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.111111
19	16563124	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.611111
19	16563155	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.222222
19	16563158	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.117647
19	16563622	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.222222
19	16563649	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.1
19	16563663	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	16563698	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.2
19	16563740	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.307692
19	16563748	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.1875
19	16563760	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.1
19	16567407	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.153846
19	16569110	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.230769
19	16569157	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.571429
19	16569173	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.153846
19	16569204	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.153846
19	16569251	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.125
19	16569666	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.214286
19	16569761	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0740741
19	16569781	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.12
19	16569787	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0833333
19	16569792	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.2
19	16571046	A->G	-	ENSG00000127526	SLC35E1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	16636722	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.181818
19	16642355	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.230769
19	16642386	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.4
19	16642540	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.272727
19	16642728	A->G	-	ENSG00000269427	AC024075.3	antisense	Intergenic	.	.	Alu	0.4
19	17083147	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17083777	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17083823	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.285714
19	17083834	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17083851	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.142857
19	17084154	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.5
19	17095025	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17104673	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17105298	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.181818
19	17106854	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.272727
19	17108965	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17117697	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17117835	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.166667
19	17120461	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.2
19	17153263	A->G	+	ENSG00000268056	AC020913.1	antisense	Intergenic	.	.	Alu	0.25
19	17153264	A->G	+	ENSG00000268056	AC020913.1	antisense	Intergenic	.	.	Alu	0.363636
19	17161695	A->G	+	ENSG00000268056	AC020913.1	antisense	Intergenic	.	.	Alu	0.181818
19	17173430	A->G	+	ENSG00000099331	MYO9B	protein_coding	Intergenic	.	.	Alu	0.4
19	18002983	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.108108
19	18002988	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0434783
19	18003020	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0877193
19	18003041	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0377358
19	18003057	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0714286
19	18003063	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0704225
19	18003082	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.025641
19	18003089	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0243902
19	18003090	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.097561
19	18003189	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.136364
19	18003290	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.176471
19	18003298	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.122807
19	18003306	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0555556
19	18003328	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0566038
19	18003331	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.218182
19	18003360	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0576923
19	18003366	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0384615
19	18003393	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0465116
19	18003396	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0434783
19	18003406	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.047619
19	18003486	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.117647
19	18003494	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0810811
19	18003554	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.16
19	18003701	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.111111
19	18003957	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.6
19	18003982	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.148148
19	18004034	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.103448
19	18004035	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.107143
19	18004036	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.214286
19	18004053	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0689655
19	18004125	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.1875
19	18004179	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0689655
19	18004194	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0645161
19	18004195	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0666667
19	18004204	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.137931
19	18004309	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0526316
19	18004312	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.105263
19	18004341	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.219512
19	18004348	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.170732
19	18004387	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0833333
19	18004610	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0952381
19	18004638	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.15
19	18004639	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.157895
19	18004641	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.157895
19	18004791	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.272727
19	18004873	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.117647
19	18004880	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.1
19	18004967	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0952381
19	18010879	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.05
19	18010889	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0833333
19	18010915	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0701754
19	18010918	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0526316
19	18010932	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0576923
19	18011055	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.237288
19	18011068	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0508475
19	18011115	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0363636
19	18011318	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0344828
19	18011394	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0253165
19	18011395	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0379747
19	18011610	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0416667
19	18011611	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0666667
19	18011627	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0253165
19	18011633	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.038961
19	18011665	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0238095
19	18011687	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0232558
19	18011784	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.127273
19	18012057	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.166667
19	18012142	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.2
19	18012508	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0666667
19	18012512	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.0444444
19	18012519	A->G	+	ENSG00000105643	ARRDC2	protein_coding	Intergenic	.	.	Alu	0.175
19	18178209	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18178236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
19	18178407	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
19	18178410	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
19	18178503	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0338983
19	18178580	A->G	+	.	.	.	Intergenic	.	.	Alu	0.212121
19	18178756	A->G	+	.	.	.	Intergenic	.	.	Alu	0.137931
19	18178775	A->G	+	.	.	.	Intergenic	.	.	Alu	0.16129
19	18178776	A->G	+	.	.	.	Intergenic	.	.	Alu	0.354839
19	18178780	A->G	+	.	.	.	Intergenic	.	.	Alu	0.129032
19	18178815	A->G	+	.	.	.	Intergenic	.	.	Alu	0.115385
19	18178889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.114286
19	18178909	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0566038
19	18178912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0701754
19	18178935	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0615385
19	18178947	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
19	18178949	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0294118
19	18179134	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
19	18179158	A->G	+	.	.	.	Intergenic	.	.	Alu	0.047619
19	18179169	A->G	+	.	.	.	Intergenic	.	.	Alu	0.175
19	18179345	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
19	18179352	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
19	18179406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18179432	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
19	18179482	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0540541
19	18179488	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
19	18179489	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
19	18179528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0833333
19	18179537	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
19	18179624	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	18179625	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	18179866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
19	18179867	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18179988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	18180035	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
19	18180051	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0909091
19	18180448	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
19	18181323	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	18181347	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	18184041	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
19	18275361	A->G	-	.	.	.	Intergenic	.	.	Alu	0.277778
19	18275362	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
19	18275416	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	18276165	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0526316
19	18276231	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
19	18276232	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
19	18276267	A->G	-	.	.	.	Intergenic	.	.	Alu	0.157895
19	18278608	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0487805
19	18304008	A->G	+	.	.	.	Intergenic	.	.	Alu	0.133333
19	18305745	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18305746	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	18305808	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
19	18453211	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.2
19	18471122	A->G	-	ENSG00000105656	ELL	protein_coding	Intergenic	.	.	Alu	0.230769
19	18574113	A->G	+	ENSG00000221983	UBA52	protein_coding	Intergenic	.	.	Alu	0.3
19	18574137	A->G	+	ENSG00000221983	UBA52	protein_coding	Intergenic	.	.	Alu	0.2
19	18574141	A->G	+	ENSG00000221983	UBA52	protein_coding	Intergenic	.	.	Alu	0.357143
19	18574163	A->G	+	ENSG00000221983	UBA52	protein_coding	Intergenic	.	.	Alu	0.285714
19	18908175	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.15
19	18908237	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	18908702	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.181818
19	18908841	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
19	18908876	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.25
19	18908898	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.333333
19	18908915	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0952381
19	18908922	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.1875
19	18908936	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0869565
19	18908941	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.142857
19	18908954	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.1875
19	18908962	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.285714
19	18910423	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.0645161
19	18910463	A->G	-	ENSG00000105669	COPE	protein_coding	Intergenic	.	.	Alu	0.166667
19	18970256	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
19	18970635	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
19	18970637	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
19	18971079	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	18971080	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	18973329	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	19322173	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.2
19	19322478	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.230769
19	19322493	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.272727
19	19328012	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.3
19	19328039	A->G	+	ENSG00000129933	MAU2	protein_coding	Intergenic	.	.	Alu	0.25
19	19424885	A->G	+	ENSG00000167491	GATAD2A	protein_coding	Intergenic	.	.	Alu	0.3
19	19669745	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.142857
19	19670703	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.117647
19	19673044	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.142857
19	19673087	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.153846
19	19675319	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.133333
19	19675371	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.176471
19	19675381	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.230769
19	19675400	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.133333
19	19675794	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.2
19	19676075	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.625
19	19676086	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.411765
19	19676097	A->G	+	ENSG00000181896	ZNF101	protein_coding	Intergenic	.	.	Alu	0.166667
19	19788424	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.3
19	19790766	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.4
19	19790818	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.2
19	19801395	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.2
19	19818872	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intergenic	.	.	Alu	0.142857
19	20542296	A->G	-	ENSG00000237440	ZNF737	protein_coding	Intergenic	.	.	Alu	0.384615
19	20542357	A->G	-	ENSG00000237440	ZNF737	protein_coding	Intergenic	.	.	Alu	0.2
19	20641625	A->G	-	ENSG00000188171	ZNF626	protein_coding	Intergenic	.	.	Alu	0.153846
19	21021297	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.333333
19	21021317	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.166667
19	21021486	A->G	+	ENSG00000118620	ZNF430	protein_coding	Intergenic	.	.	Alu	0.25
19	21147342	A->G	+	ENSG00000196705	ZNF431	protein_coding	Intergenic	.	.	Alu	0.181818
19	23371096	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.2
19	23371097	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.2
19	23371289	A->G	-	ENSG00000167232	ZNF91	protein_coding	Intergenic	.	.	Alu	0.230769
19	23652431	A->G	-	ENSG00000197372	ZNF675	protein_coding	Intergenic	.	.	Alu	0.08
19	32700547	A->G	+	ENSG00000213965	NUDT19	protein_coding	Intergenic	.	.	Alu	0.142857
19	34201925	A->G	+	ENSG00000257103	LSM14A	protein_coding	Intergenic	.	.	Alu	0.2
19	34444727	A->G	+	ENSG00000126261	UBA2	protein_coding	Intergenic	.	.	Alu	0.2
19	34471536	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
19	35158869	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.0526316
19	35160021	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.09375
19	35160025	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.172414
19	35160048	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.09375
19	35160070	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.133333
19	35160406	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.0444444
19	35160429	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.0612245
19	35160453	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.047619
19	35160454	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.047619
19	35160486	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.131579
19	35160488	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.0512821
19	35160495	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.0714286
19	35160546	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.148148
19	35160580	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.114286
19	35160585	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.0571429
19	35160607	A->G	+	ENSG00000089327	FXYD5	protein_coding	Intergenic	.	.	Alu	0.0625
19	35171585	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	35172252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	35273651	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.192308
19	35273658	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.0625
19	35274611	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.307692
19	35274642	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.130435
19	35274652	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.0645161
19	35274716	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.0952381
19	35274726	A->G	+	ENSG00000105698	USF2	protein_coding	Intergenic	.	.	Alu	0.142857
19	35885738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1875
19	35891758	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0606061
19	35891804	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.235294
19	35891805	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.294118
19	35891828	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.6
19	35891961	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.833333
19	35891975	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.416667
19	35891985	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.125
19	35891998	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.263158
19	35891999	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.35
19	35892020	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.1
19	35892080	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0555556
19	35892105	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0909091
19	35892148	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.105263
19	35892149	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.105263
19	35892176	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.25
19	35892216	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.157895
19	35892219	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0555556
19	35892308	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0714286
19	35892319	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.185185
19	35892324	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.5
19	35892325	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.08
19	35892468	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.125
19	35892922	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0555556
19	35892947	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.0909091
19	35893087	A->G	-	ENSG00000167604	NFKBID	protein_coding	Intergenic	.	.	Alu	0.130435
19	37326745	A->G	+	ENSG00000181666	HKR1	protein_coding	Intergenic	.	.	Alu	0.5
19	38626382	A->G	+	ENSG00000178982	EIF3K	protein_coding	Intergenic	.	.	Alu	0.363636
19	38703303	A->G	+	ENSG00000130402	ACTN4	protein_coding	Intergenic	.	.	Alu	0.2
19	38703338	A->G	+	ENSG00000130402	ACTN4	protein_coding	Intergenic	.	.	Alu	0.2
19	39333534	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.153846
19	39334427	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.153846
19	39334432	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.166667
19	39334441	A->G	-	ENSG00000130755	GMFG	protein_coding	Intergenic	.	.	Alu	0.125
19	39977566	A->G	+	ENSG00000013275	PSMC4	protein_coding	Intergenic	.	.	Alu	0.363636
19	39977567	A->G	+	ENSG00000013275	PSMC4	protein_coding	Intergenic	.	.	Alu	0.153846
19	39977632	A->G	+	ENSG00000013275	PSMC4	protein_coding	Intergenic	.	.	Alu	0.3
19	39977634	A->G	+	ENSG00000013275	PSMC4	protein_coding	Intergenic	.	.	Alu	0.2
19	40581286	A->G	+	ENSG00000160410	SHKBP1	protein_coding	Intergenic	.	.	Alu	0.181818
19	40581460	A->G	+	ENSG00000160410	SHKBP1	protein_coding	Intergenic	.	.	Alu	0.181818
19	40581974	A->G	+	ENSG00000160410	SHKBP1	protein_coding	Intergenic	.	.	Alu	0.2
19	41269561	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.125
19	41269728	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.1
19	41278113	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.125
19	41291502	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.5
19	41291727	A->G	+	ENSG00000105323	HNRNPUL1	protein_coding	Intergenic	.	.	Alu	0.2
19	41311542	A->G	+	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.272727
19	41312358	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.181818
19	41312918	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	41312963	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.1
19	41312990	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.125
19	41313893	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.115385
19	41314250	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.2
19	41314782	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.1
19	41315200	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.2
19	41315213	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.2
19	41315459	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0588235
19	41315547	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0714286
19	41315978	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.136364
19	41316032	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0833333
19	41332747	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.09375
19	41332759	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0566038
19	41333625	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0689655
19	41333632	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.08
19	41334275	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.103448
19	41334332	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.15
19	41334489	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	41334572	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.172414
19	41334573	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	41334629	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0666667
19	41334630	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0666667
19	41334634	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0408163
19	41334640	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0416667
19	41334643	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0416667
19	41334666	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0363636
19	41335217	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.190476
19	41335220	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.173913
19	41335227	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.111111
19	41335247	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.125
19	41335248	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.111111
19	41335771	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.102041
19	41335772	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0454545
19	41336463	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0526316
19	41336662	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0571429
19	41336665	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0645161
19	41336669	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	41337106	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0645161
19	41337234	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.272727
19	41337368	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.125
19	41337413	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	41337414	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	41338080	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0512821
19	41338082	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.135135
19	41338083	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0789474
19	41338140	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.133333
19	41338366	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0740741
19	41338588	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0731707
19	41338617	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.108108
19	41338618	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0540541
19	41338676	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0465116
19	41338717	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0487805
19	41338727	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0512821
19	41338739	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0571429
19	41338756	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.111111
19	41339187	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0689655
19	41339195	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.031746
19	41339244	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0377358
19	41339254	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.3125
19	41339414	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.166667
19	41340442	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.2
19	41340446	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.142857
19	41341142	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.545455
19	41341164	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.117647
19	41341167	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.111111
19	41341222	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	41341351	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.232558
19	41341355	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	41341571	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.352941
19	41341614	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.153846
19	41341682	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.176471
19	41341705	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.222222
19	41345888	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.117647
19	41347094	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0784314
19	41347095	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0392157
19	41347216	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0434783
19	41347623	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0483871
19	41347625	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0322581
19	41347662	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0652174
19	41348117	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.214286
19	41348788	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	41348812	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.111111
19	41349735	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.285714
19	41350472	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.166667
19	41350535	A->G	-	ENSG00000105329	TGFB1	protein_coding	Intergenic	.	.	Alu	0.133333
19	41866853	A->G	+	ENSG00000105372	RPS19	protein_coding	Intergenic	.	.	Alu	0.363636
19	41866857	A->G	+	ENSG00000105372	RPS19	protein_coding	Intergenic	.	.	Alu	0.166667
19	41866896	A->G	+	ENSG00000105372	RPS19	protein_coding	Intergenic	.	.	Alu	0.3
19	41867724	A->G	+	ENSG00000105372	RPS19	protein_coding	Intergenic	.	.	Alu	0.157895
19	43488410	A->G	-	ENSG00000176531	PHLDB3	protein_coding	Intergenic	.	.	Alu	0.166667
19	43493532	A->G	-	ENSG00000176531	PHLDB3	protein_coding	Intergenic	.	.	Alu	0.272727
19	43493593	A->G	-	ENSG00000176531	PHLDB3	protein_coding	Intergenic	.	.	Alu	0.181818
19	43493601	A->G	-	ENSG00000176531	PHLDB3	protein_coding	Intergenic	.	.	Alu	0.153846
19	43494075	A->G	-	ENSG00000176531	PHLDB3	protein_coding	Intergenic	.	.	Alu	0.111111
19	43647761	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.230769
19	43647766	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.307692
19	43647792	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.142857
19	43648205	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.181818
19	43648206	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.208333
19	43650525	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.3
19	43650947	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.166667
19	43650950	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.545455
19	43650951	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.545455
19	43652811	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.179487
19	43652893	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.04
19	43652930	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0810811
19	43653021	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0952381
19	43653092	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.1
19	43657171	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0882353
19	43657946	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0666667
19	43657985	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0833333
19	43658006	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0746269
19	43658011	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0428571
19	43659352	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0555556
19	43659380	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0491803
19	43659402	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0454545
19	43659434	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0240964
19	43659438	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0273973
19	43659447	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0571429
19	43662004	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0655738
19	43662021	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0588235
19	43662253	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.111111
19	43662313	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.214286
19	43662316	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.142857
19	43662389	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.185185
19	43662390	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0666667
19	43662398	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0645161
19	43662415	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.129032
19	43662422	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.206897
19	43662783	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.181818
19	43662788	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.1
19	43662847	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0634921
19	43662875	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0307692
19	43662879	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.030303
19	43662886	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.030303
19	43662898	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0289855
19	43662964	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0350877
19	43663252	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.9
19	43663537	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.128205
19	43663547	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.111111
19	43663589	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0689655
19	43664529	A->G	-	ENSG00000011422	PLAUR	protein_coding	Intergenic	.	.	Alu	0.0232558
19	44750393	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.133333
19	44750689	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.105263
19	44752390	A->G	+	ENSG00000069399	BCL3	protein_coding	Intergenic	.	.	Alu	0.0540541
19	45004953	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45006285	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0625
19	45006332	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.12
19	45006424	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45010044	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45010045	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45010098	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.133333
19	45010182	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45010196	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.230769
19	45010206	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45012970	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0645161
19	45013401	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45013782	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45013821	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0666667
19	45013822	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.172414
19	45014335	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45014406	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.103448
19	45014418	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45014432	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.08
19	45014433	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.16
19	45014617	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.157895
19	45014618	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.238095
19	45014635	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.214286
19	45014647	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.125
19	45014754	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.15
19	45014771	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45014781	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.294118
19	45015502	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.307692
19	45017684	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45017745	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45017746	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.277778
19	45017779	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.545455
19	45018180	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45018238	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45018876	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45019082	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.103448
19	45019114	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.291667
19	45019116	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.32
19	45019142	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0606061
19	45019180	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.16129
19	45019202	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0789474
19	45019220	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0555556
19	45019697	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.136364
19	45019700	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.421053
19	45019844	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.142857
19	45019877	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45020020	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.176471
19	45020288	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45020336	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.136364
19	45020461	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0869565
19	45020466	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.1
19	45020479	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.2
19	45020488	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45020933	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.631579
19	45020993	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.222222
19	45021015	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.105263
19	45021022	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.111111
19	45021041	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.384615
19	45021054	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.117647
19	45021064	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.166667
19	45021068	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.294118
19	45021151	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45021668	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45021674	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45031253	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.3
19	45031360	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.272727
19	45034941	A->G	+	ENSG00000104856	RELB	protein_coding	Intergenic	.	.	Alu	0.181818
19	45066220	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.4
19	45066259	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.272727
19	45066261	A->G	+	ENSG00000104859	CLASRP	protein_coding	Intergenic	.	.	Alu	0.166667
19	45518441	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.25
19	45518442	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.318182
19	45518512	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.0882353
19	45518517	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.117647
19	45518686	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.105263
19	45518688	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.176471
19	45518765	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.1
19	45518782	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.117647
19	45518791	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.117647
19	45518901	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.181818
19	45519196	A->G	+	ENSG00000125753	VASP	protein_coding	Intergenic	.	.	Alu	0.25
19	45529830	A->G	+	ENSG00000125741	OPA3	protein_coding	Intergenic	.	.	Alu	0.125
19	45529831	A->G	+	ENSG00000125741	OPA3	protein_coding	Intergenic	.	.	Alu	0.235294
19	45529995	A->G	+	ENSG00000125741	OPA3	protein_coding	Intergenic	.	.	Alu	0.166667
19	45529996	A->G	+	ENSG00000125741	OPA3	protein_coding	Intergenic	.	.	Alu	0.416667
19	45530694	A->G	+	ENSG00000125741	OPA3	protein_coding	Intergenic	.	.	Alu	0.0952381
19	45530727	A->G	+	ENSG00000125741	OPA3	protein_coding	Intergenic	.	.	Alu	0.15
19	45694222	A->G	+	ENSG00000011478	QPCTL	protein_coding	Intergenic	.	.	Alu	0.125
19	45694258	A->G	+	ENSG00000011478	QPCTL	protein_coding	Intergenic	.	.	Alu	0.166667
19	45695056	A->G	+	ENSG00000011478	QPCTL	protein_coding	Intergenic	.	.	Alu	0.166667
19	45695110	A->G	+	ENSG00000011478	QPCTL	protein_coding	Intergenic	.	.	Alu	0.181818
19	45859553	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.166667
19	45859554	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.166667
19	45860755	A->G	-	ENSG00000125755	SYMPK	protein_coding	Intergenic	.	.	Alu	0.5
19	46781967	A->G	-	ENSG00000105281	SLC1A5	protein_coding	Intergenic	.	.	Alu	0.5
19	46781991	A->G	-	ENSG00000105281	SLC1A5	protein_coding	Intergenic	.	.	Alu	0.153846
19	46781992	A->G	-	ENSG00000105281	SLC1A5	protein_coding	Intergenic	.	.	Alu	0.461538
19	46782022	A->G	-	ENSG00000105281	SLC1A5	protein_coding	Intergenic	.	.	Alu	0.166667
19	47310632	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.153846
19	47310717	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.285714
19	47311642	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.2
19	47311668	A->G	+	ENSG00000197405	C5AR1	protein_coding	Intergenic	.	.	Alu	0.181818
19	47350319	A->G	+	ENSG00000134815	DHX34	protein_coding	Intergenic	.	.	Alu	0.428571
19	47350654	A->G	+	ENSG00000134815	DHX34	protein_coding	Intergenic	.	.	Alu	0.307692
19	47350682	A->G	+	ENSG00000134815	DHX34	protein_coding	Intergenic	.	.	Alu	0.272727
19	47363556	A->G	+	ENSG00000134815	DHX34	protein_coding	Intergenic	.	.	Alu	0.3
19	47363562	A->G	+	ENSG00000134815	DHX34	protein_coding	Intergenic	.	.	Alu	0.4
19	47363563	A->G	+	ENSG00000134815	DHX34	protein_coding	Intergenic	.	.	Alu	0.3
19	47494662	A->G	-	ENSG00000268061	NAPA-AS1	antisense	Intergenic	.	.	Alu	0.111111
19	48328003	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.1875
19	48328068	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0571429
19	48328860	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0638298
19	48328960	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0307692
19	48329079	A->G	+	ENSG00000142227	EMP3	protein_coding	Intergenic	.	.	Alu	0.0266667
19	49483647	A->G	+	ENSG00000269469	AC010619.1	protein_coding	Intergenic	.	.	Alu	0.2
19	49483709	A->G	+	ENSG00000269469	AC010619.1	protein_coding	Intergenic	.	.	Alu	0.307692
19	49484699	A->G	+	ENSG00000269469	AC010619.1	protein_coding	Intergenic	.	.	Alu	0.181818
19	49485120	A->G	+	ENSG00000269469	AC010619.1	protein_coding	Intergenic	.	.	Alu	0.2
19	49485121	A->G	+	ENSG00000269469	AC010619.1	protein_coding	Intergenic	.	.	Alu	0.166667
19	49485493	A->G	+	ENSG00000269469	AC010619.1	protein_coding	Intergenic	.	.	Alu	0.3125
19	49485587	A->G	+	ENSG00000269469	AC010619.1	protein_coding	Intergenic	.	.	Alu	0.142857
19	49485746	A->G	+	ENSG00000269469	AC010619.1	protein_coding	Intergenic	.	.	Alu	0.103448
19	49488915	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.08
19	49489305	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.342857
19	49489354	A->G	+	ENSG00000142541	RPL13A	protein_coding	Intergenic	.	.	Alu	0.0588235
19	51131314	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.0833333
19	51131376	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.1875
19	51133489	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.153846
19	51133503	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.142857
19	51133504	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.2
19	51133515	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.117647
19	51133570	A->G	+	ENSG00000129450	SIGLEC9	protein_coding	Intergenic	.	.	Alu	0.230769
19	51638939	A->G	-	ENSG00000105501	SIGLEC5	protein_coding	Intergenic	.	.	Alu	0.3
19	51741084	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
19	51744259	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
19	51744317	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
19	52154577	A->G	-	ENSG00000267827	AC011468.2	processed_transcript	Intergenic	.	.	Alu	0.25
19	52154584	A->G	-	ENSG00000267827	AC011468.2	processed_transcript	Intergenic	.	.	Alu	0.181818
19	52154609	A->G	-	ENSG00000267827	AC011468.2	processed_transcript	Intergenic	.	.	Alu	0.5
19	52197417	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.166667
19	52197419	A->G	+	ENSG00000105568	PPP2R1A	protein_coding	Intergenic	.	.	Alu	0.181818
19	52557341	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.181818
19	52557478	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.416667
19	52557530	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.2
19	52557536	A->G	+	ENSG00000198482	ZNF808	protein_coding	Intergenic	.	.	Alu	0.3
19	52643000	A->G	-	ENSG00000167766	ZNF83	protein_coding	Intergenic	.	.	Alu	0.2
19	52702388	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
19	52783851	A->G	-	ENSG00000189190	ZNF600	protein_coding	Intergenic	.	.	Alu	0.272727
19	53540513	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0666667
19	53540642	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0277778
19	53540699	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0348837
19	53541773	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0425532
19	53541886	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0857143
19	53541890	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.05
19	53541928	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.115385
19	53541938	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.175
19	53541985	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0307692
19	53542910	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.047619
19	53543071	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0508475
19	53543083	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.031746
19	53543286	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0588235
19	53543951	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0416667
19	53543973	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0512821
19	53543974	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0512821
19	53543979	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.205128
19	53543982	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.342105
19	53544017	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.111111
19	53544028	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.125
19	53544051	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.105263
19	53544434	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.3
19	53544917	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.45
19	53544984	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.103448
19	53544998	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0588235
19	53556164	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0289855
19	53556514	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0434783
19	53556712	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0208333
19	53557701	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0430108
19	53557707	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.047619
19	53557721	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0853659
19	53557817	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0555556
19	53557941	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.025974
19	53562567	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.1875
19	53562757	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.037037
19	53562765	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0833333
19	53562811	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0740741
19	53562812	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0769231
19	53563253	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.1
19	53563254	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0967742
19	53563271	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0571429
19	53563329	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.128205
19	53563348	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0540541
19	53563351	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0487805
19	53563870	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.263158
19	53563875	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0526316
19	53563912	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.209302
19	53563918	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0487805
19	53563922	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.114286
19	53563926	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.135135
19	53563939	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.25
19	53563954	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0606061
19	53563988	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.178571
19	53564333	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.2
19	53564344	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0465116
19	53564359	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.104167
19	53564380	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0851064
19	53564384	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0384615
19	53564397	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.102564
19	53564405	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.243243
19	53564406	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0487805
19	53564445	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.047619
19	53564460	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0571429
19	53564469	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0952381
19	53566318	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.105263
19	53566354	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0638298
19	53566373	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0416667
19	53566393	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.097561
19	53566418	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0540541
19	53567609	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0681818
19	53567659	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.046875
19	53567722	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.078125
19	53567723	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0441176
19	53567768	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.025974
19	53567788	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0224719
19	53567800	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.123596
19	53568073	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0869565
19	53568102	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.363636
19	53568126	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.173913
19	53568128	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0769231
19	53568177	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0769231
19	53568189	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.821429
19	53568195	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.222222
19	53568197	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.153846
19	53568926	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.478261
19	53568937	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.136364
19	53568975	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.125
19	53568986	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.166667
19	53568996	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.466667
19	53568998	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.133333
19	53569023	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.1
19	53569063	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.153846
19	53569068	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.111111
19	53569118	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.15625
19	53570070	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0857143
19	53570085	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0526316
19	53570094	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0487805
19	53571041	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0526316
19	53572442	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0526316
19	53573507	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.153846
19	53573572	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0666667
19	53573702	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0625
19	53573712	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0689655
19	53573731	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0833333
19	53573855	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0952381
19	53573903	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0882353
19	53573912	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.2
19	53573960	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.0425532
19	53573991	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.162791
19	53574969	A->G	+	ENSG00000130844	ZNF331	protein_coding	Intergenic	.	.	Alu	0.181818
19	54097742	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.117647
19	54097758	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.176471
19	54098440	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.272727
19	54098550	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.166667
19	54098648	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.272727
19	54098814	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.545455
19	54098823	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.181818
19	54099341	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.181818
19	54099342	A->G	-	ENSG00000170909	OSCAR	protein_coding	Intergenic	.	.	Alu	0.272727
19	54202932	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0224719
19	54202933	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.021978
19	54205848	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0645161
19	54213072	A->G	+	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.3
19	54216195	A->G	-	ENSG00000170889	RPS9	protein_coding	Intergenic	.	.	Alu	0.0416667
19	54237206	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.181818
19	54237319	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.105263
19	54237325	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.352941
19	54237346	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.0909091
19	54238106	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.166667
19	54238303	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.111111
19	54238308	A->G	-	ENSG00000244482	LILRA6	protein_coding	Intergenic	.	.	Alu	0.1875
19	54451802	A->G	+	ENSG00000167615	LENG8	protein_coding	Intergenic	.	.	Alu	1
19	54457420	A->G	+	ENSG00000167615	LENG8	protein_coding	Intergenic	.	.	Alu	0.0740741
19	54886994	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.181818
19	54886998	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.181818
19	54887366	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.2
19	54887797	A->G	+	ENSG00000186431	FCAR	protein_coding	Intergenic	.	.	Alu	0.166667
19	54891526	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
19	54891541	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
19	54891627	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
19	54891629	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
19	54892240	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
19	54892241	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
19	54892253	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
19	54913239	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.4
19	54913288	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.357143
19	54913289	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.714286
19	54913293	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.230769
19	54913328	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.117647
19	54913334	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.25
19	54913336	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.25
19	54913654	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.181818
19	54914055	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.111111
19	54914056	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.117647
19	54914073	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.1
19	54914074	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.1
19	54914075	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.0952381
19	54914331	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.266667
19	54914369	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.454545
19	54914378	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.363636
19	54914390	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.454545
19	54914468	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.363636
19	54914573	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.142857
19	54914582	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.230769
19	54914615	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.1
19	54914622	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.1
19	54914631	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.157895
19	54914917	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.125
19	54914923	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.333333
19	54914926	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.333333
19	54914963	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.318182
19	54914965	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.0869565
19	54914977	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.1875
19	54915004	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.0909091
19	54915005	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.121212
19	54915017	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.117647
19	54915019	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.0606061
19	54915039	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.0571429
19	54915464	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.2
19	54915466	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.142857
19	54915584	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.3
19	54915596	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.6
19	54915597	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.3
19	54915609	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.363636
19	54915721	A->G	+	ENSG00000189430	NCR1	protein_coding	Intergenic	.	.	Alu	0.2
19	57300469	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0943396
19	57300520	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0344828
19	57304179	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0625
19	57770951	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.3
19	57775477	A->G	+	ENSG00000083828	ZNF586	protein_coding	Intergenic	.	.	Alu	0.3
19	57843065	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.2
19	57843070	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.0769231
19	57843190	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.4
19	57843254	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.153846
19	57843728	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.176471
19	57843782	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.307692
19	57844224	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.125
19	57844245	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.2
19	57844252	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.642857
19	57844254	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intergenic	.	.	Alu	0.428571
19	57906026	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.0833333
19	57906544	A->G	-	ENSG00000269476	AC010326.2	protein_coding	Intergenic	.	.	Alu	0.333333
19	58313473	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.166667
19	58314440	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.181818
19	58314516	A->G	+	ENSG00000283515	AC020915.5	protein_coding	Intergenic	.	.	Alu	0.142857
20	17677833	A->G	-	ENSG00000125844	RRBP1	protein_coding	Intergenic	.	.	Alu	0.4
20	18542735	A->G	+	ENSG00000101310	SEC23B	protein_coding	Intergenic	.	.	Alu	0.133333
20	21312331	A->G	+	ENSG00000088930	XRN2	protein_coding	Intergenic	.	.	Alu	0.166667
20	23368064	A->G	+	ENSG00000125812	GZF1	protein_coding	Intergenic	.	.	Alu	0.1
20	25387316	A->G	-	ENSG00000100997	ABHD12	protein_coding	Intergenic	.	.	Alu	0.2
20	31531918	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.166667
20	31545583	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.230769
20	31545750	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.2
20	31545834	A->G	+	ENSG00000101294	HM13	protein_coding	Intergenic	.	.	Alu	0.142857
20	32851334	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.125
20	32854012	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.315789
20	32854017	A->G	+	ENSG00000260536	AL035071.2	antisense	Intergenic	.	.	Alu	0.190476
20	33821662	A->G	+	ENSG00000101421	CHMP4B	protein_coding	Intergenic	.	.	Alu	0.272727
20	34091025	A->G	+	ENSG00000125977	EIF2S2	protein_coding	Intergenic	.	.	Alu	0.3
20	34200636	A->G	+	ENSG00000101440	ASIP	protein_coding	Intergenic	.	.	Alu	1
20	35281725	A->G	-	ENSG00000242372	EIF6	protein_coding	Intergenic	.	.	Alu	0.3
20	35283676	A->G	-	ENSG00000242372	EIF6	protein_coding	Intergenic	.	.	Alu	0.153846
20	35283684	A->G	-	ENSG00000242372	EIF6	protein_coding	Intergenic	.	.	Alu	0.272727
20	35630035	A->G	-	ENSG00000214078	CPNE1	protein_coding	Intergenic	.	.	Alu	0.4
20	35630186	A->G	-	ENSG00000214078	CPNE1	protein_coding	Intergenic	.	.	Alu	0.583333
20	35630208	A->G	-	ENSG00000214078	CPNE1	protein_coding	Intergenic	.	.	Alu	0.4
20	35713557	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0689655
20	35713558	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.111111
20	35713589	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0689655
20	35713611	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0909091
20	35719457	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.142857
20	35719485	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.285714
20	35719906	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.105263
20	35720647	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.454545
20	35723984	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.08
20	35724075	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0740741
20	35724087	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0740741
20	35724135	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.166667
20	35727215	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.08
20	35727219	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.107143
20	35727586	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0555556
20	35727614	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0769231
20	35728944	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.2
20	35736713	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.333333
20	35737014	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.1
20	35737015	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.133333
20	35737085	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.375
20	35737091	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.176471
20	35737108	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0833333
20	35737109	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.12
20	35737135	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.153846
20	35737307	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0625
20	35737308	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0645161
20	35737555	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.139535
20	35737559	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.047619
20	35737966	A->G	-	ENSG00000131051	RBM39	protein_coding	Intergenic	.	.	Alu	0.0952381
20	36576804	A->G	+	ENSG00000118707	TGIF2	protein_coding	Intergenic	.	.	Alu	0.4
20	36616967	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36618821	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.3
20	36618824	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.2
20	36618868	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.2
20	36618981	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.136364
20	36618982	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.130435
20	36619138	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.125
20	36620001	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.2
20	36620324	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.25
20	36621933	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.133333
20	36623727	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0769231
20	36623767	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.25
20	36623769	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.222222
20	36625285	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.1875
20	36625318	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.153846
20	36625347	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.272727
20	36625392	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36625395	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36625398	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.214286
20	36625614	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.3
20	36625660	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.2
20	36625732	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.214286
20	36625781	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.2
20	36625928	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.2
20	36626220	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.153846
20	36626229	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.25
20	36626305	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36626603	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.2
20	36626658	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.3
20	36626686	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.153846
20	36628637	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36628644	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.157895
20	36628648	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.105263
20	36628674	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.111111
20	36628678	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0909091
20	36628835	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0833333
20	36628845	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36629517	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.111111
20	36629816	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0833333
20	36629826	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0833333
20	36629838	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0909091
20	36629855	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.115385
20	36629856	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0740741
20	36629881	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.125
20	36631267	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0909091
20	36631291	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36637703	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.1
20	36637751	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.133333
20	36637755	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36637764	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.125
20	36638943	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.142857
20	36638984	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36638985	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.166667
20	36639847	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.153846
20	36640602	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.111111
20	36640627	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.2
20	36640654	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.272727
20	36642496	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.111111
20	36642541	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.1
20	36642542	A->G	-	ENSG00000101082	SLA2	protein_coding	Intergenic	.	.	Alu	0.0952381
20	36894902	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36894903	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36894965	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.166667
20	36914960	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.909091
20	36936709	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.3125
20	36936750	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.461538
20	36936757	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.142857
20	36936787	A->G	-	ENSG00000101347	SAMHD1	protein_coding	Intergenic	.	.	Alu	0.2
20	37094773	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.181818
20	37094841	A->G	-	ENSG00000080839	RBL1	protein_coding	Intergenic	.	.	Alu	0.2
20	37212317	A->G	+	ENSG00000118705	RPN2	protein_coding	Intergenic	.	.	Alu	0.181818
20	37212327	A->G	+	ENSG00000118705	RPN2	protein_coding	Intergenic	.	.	Alu	0.4
20	37212342	A->G	+	ENSG00000118705	RPN2	protein_coding	Intergenic	.	.	Alu	0.272727
20	38808158	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.266667
20	38808161	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.104167
20	38808167	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0714286
20	38808672	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.190476
20	38808706	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.191489
20	38808715	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.0666667
20	38818878	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.133333
20	38819454	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.3
20	38910162	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.125
20	38910243	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.181818
20	38912889	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.2
20	38915699	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.166667
20	38915764	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.133333
20	38915767	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.142857
20	38916111	A->G	+	ENSG00000101445	PPP1R16B	protein_coding	Intergenic	.	.	Alu	0.2
20	41056610	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.2
20	41056622	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.384615
20	41121003	A->G	+	ENSG00000198900	TOP1	protein_coding	Intergenic	.	.	Alu	0.25
20	43464692	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
20	43465362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
20	43465733	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
20	43467289	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
20	44477996	A->G	+	ENSG00000124120	TTPAL	protein_coding	Intergenic	.	.	Alu	0.3
20	44502459	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.307692
20	44502461	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.153846
20	44502515	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.142857
20	44502523	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.428571
20	44502856	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.1875
20	44510700	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.461538
20	44510725	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.416667
20	44511038	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.3
20	44511078	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.214286
20	44511084	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.153846
20	44511096	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.666667
20	44511108	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.272727
20	44511126	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.4
20	44511186	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.153846
20	44516154	A->G	-	ENSG00000132824	SERINC3	protein_coding	Intergenic	.	.	Alu	0.3
20	45033721	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.2
20	45045936	A->G	+	ENSG00000101109	STK4	protein_coding	Intergenic	.	.	Alu	0.2
20	45954833	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.5
20	45954840	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.125
20	45954860	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.227273
20	45954906	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.8
20	45955092	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.153846
20	45955094	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.333333
20	45956429	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.3
20	45956431	A->G	-	ENSG00000198026	ZNF335	protein_coding	Intergenic	.	.	Alu	0.2
20	48643303	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.4
20	48643306	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.3
20	48643736	A->G	-	ENSG00000124126	PREX1	protein_coding	Intergenic	.	.	Alu	0.363636
20	49132571	A->G	-	ENSG00000124214	STAU1	protein_coding	Intergenic	.	.	Alu	0.2
20	49237248	A->G	+	ENSG00000124228	DDX27	protein_coding	Intergenic	.	.	Alu	0.166667
20	49259490	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.2
20	49262170	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.25
20	49262171	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.166667
20	49262185	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.416667
20	49262223	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.5
20	49273404	A->G	-	ENSG00000124201	ZNFX1	protein_coding	Intergenic	.	.	Alu	0.2
20	49827510	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.181818
20	49827516	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.181818
20	49827536	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.272727
20	49856675	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.5
20	49856742	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.3
20	49872587	A->G	+	ENSG00000197818	SLC9A8	protein_coding	Intergenic	.	.	Alu	0.181818
20	49942680	A->G	+	ENSG00000124226	RNF114	protein_coding	Intergenic	.	.	Alu	0.2
20	50136948	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	Intergenic	.	.	Alu	0.2
20	50137164	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	Intergenic	.	.	Alu	0.2
20	50147796	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	Intergenic	.	.	Alu	0.2
20	50895637	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.166667
20	50895643	A->G	-	ENSG00000101126	ADNP	protein_coding	Intergenic	.	.	Alu	0.153846
20	50942607	A->G	-	ENSG00000259456	ADNP-AS1	antisense	Intergenic	.	.	Alu	0.153846
20	50949131	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.2
20	50950704	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.333333
20	50950722	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.2
20	50950787	A->G	-	ENSG00000000419	DPM1	protein_coding	Intergenic	.	.	Alu	0.181818
20	53573888	A->G	-	ENSG00000197670	AL157838.1	antisense	Intergenic	.	.	Alu	0.181818
20	53849990	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
20	53850058	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
20	56477569	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.272727
20	56477573	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.545455
20	56478227	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.166667
20	56478272	A->G	+	ENSG00000022277	RTF2	protein_coding	Intergenic	.	.	Alu	0.454545
20	56524249	A->G	+	ENSG00000124103	FAM209A	protein_coding	Intergenic	.	.	Alu	0.2
20	57387261	A->G	-	ENSG00000218018	AL109955.1	antisense	Intergenic	.	.	Alu	0.133333
20	58307644	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.3
20	58307956	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.1
20	58308048	A->G	-	ENSG00000124224	PPP4R1L	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.181818
20	58314148	A->G	+	ENSG00000124209	RAB22A	protein_coding	Intergenic	.	.	Alu	0.181818
20	62126832	A->G	+	ENSG00000149657	LSM14B	protein_coding	Intergenic	.	.	Alu	0.133333
20	62126835	A->G	+	ENSG00000149657	LSM14B	protein_coding	Intergenic	.	.	Alu	0.133333
20	63596869	A->G	-	ENSG00000101216	GMEB2	protein_coding	Intergenic	.	.	Alu	0.133333
20	63871182	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.3
20	63874083	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.142857
20	63874539	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.2
20	63874612	A->G	+	ENSG00000101150	TPD52L2	protein_coding	Intergenic	.	.	Alu	0.133333
20	63897153	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.153846
20	63899842	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.2
20	63899843	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.4
20	63900395	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.117647
20	63901065	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.117647
20	63901094	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.1
20	63901106	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.133333
20	63901185	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.333333
20	63901203	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.181818
20	63901226	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.181818
20	63903155	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.153846
20	63903408	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.3
20	63903569	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.142857
20	63903581	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.214286
20	63903814	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.181818
20	63903824	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.230769
20	63903830	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.133333
20	63903831	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.266667
20	63903905	A->G	+	ENSG00000101152	DNAJC5	protein_coding	Intergenic	.	.	Alu	0.3
20	64020891	A->G	+	ENSG00000101161	PRPF6	protein_coding	Intergenic	.	.	Alu	0.272727
21	14542700	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0714286
21	14542860	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0666667
21	14544189	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.102564
21	14544230	A->G	-	ENSG00000155307	SAMSN1	protein_coding	Intergenic	.	.	Alu	0.0444444
21	29063994	A->G	-	ENSG00000156261	CCT8	protein_coding	Intergenic	.	.	Alu	0.3
21	29064050	A->G	-	ENSG00000156261	CCT8	protein_coding	Intergenic	.	.	Alu	0.818182
21	29064203	A->G	-	ENSG00000156261	CCT8	protein_coding	Intergenic	.	.	Alu	0.181818
21	29064209	A->G	-	ENSG00000156261	CCT8	protein_coding	Intergenic	.	.	Alu	0.4
21	29338405	A->G	+	ENSG00000156273	BACH1	protein_coding	Intergenic	.	.	Alu	0.142857
21	33360173	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
21	33360208	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
21	33380226	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
21	33404550	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.1
21	33404555	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.125
21	33404563	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.125
21	33404872	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.0769231
21	33405856	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.117647
21	33406362	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.153846
21	33406709	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.166667
21	33406917	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.210526
21	33423811	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.333333
21	33429362	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.142857
21	33430032	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.105263
21	33430118	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.1
21	33430126	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.130435
21	33430673	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.153846
21	33430700	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.384615
21	33430705	A->G	+	ENSG00000159128	IFNGR2	protein_coding	Intergenic	.	.	Alu	0.285714
21	33432965	A->G	+	ENSG00000142188	TMEM50B	protein_coding	Intergenic	.	.	Alu	0.133333
21	33432979	A->G	+	ENSG00000142188	TMEM50B	protein_coding	Intergenic	.	.	Alu	0.357143
21	33432986	A->G	+	ENSG00000142188	TMEM50B	protein_coding	Intergenic	.	.	Alu	0.142857
21	34798000	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.47619
21	34854245	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.333333
21	34854509	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.1875
21	34854538	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.363636
21	34854576	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.2
21	34870896	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.105263
21	34870906	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.125
21	34870924	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.105263
21	34870955	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.153846
21	35022660	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.384615
21	35022678	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.333333
21	35023010	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.6
21	35023140	A->G	-	ENSG00000159216	RUNX1	protein_coding	Intergenic	.	.	Alu	0.2
21	36327404	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.2
21	36346784	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.181818
21	36370067	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.181818
21	36370133	A->G	+	ENSG00000159256	MORC3	protein_coding	Intergenic	.	.	Alu	0.3
21	36966032	A->G	-	ENSG00000159267	HLCS	protein_coding	Intergenic	.	.	Alu	0.2
21	36970333	A->G	+	ENSG00000224790	AP000704.1	lincRNA	Intergenic	.	.	Alu	0.2
21	36970507	A->G	+	ENSG00000224790	AP000704.1	lincRNA	Intergenic	.	.	Alu	0.166667
21	36970513	A->G	+	ENSG00000224790	AP000704.1	lincRNA	Intergenic	.	.	Alu	0.166667
21	36970634	A->G	+	ENSG00000224790	AP000704.1	lincRNA	Intergenic	.	.	Alu	0.181818
21	41405133	A->G	+	ENSG00000183486	MX2	protein_coding	Intergenic	.	.	Alu	0.105263
21	41405238	A->G	+	ENSG00000183486	MX2	protein_coding	Intergenic	.	.	Alu	0.0714286
21	41405243	A->G	+	ENSG00000183486	MX2	protein_coding	Intergenic	.	.	Alu	0.0689655
21	41447767	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.466667
21	41447829	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.541667
21	41447836	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.346154
21	41447840	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.259259
21	41447860	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.105263
21	41447871	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.25
21	41447910	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.214286
21	41447930	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.727273
21	41447981	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.8
21	41448003	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	1
21	41448012	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.272727
21	41455986	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.2
21	41456003	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.181818
21	41456959	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.272727
21	41456964	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.461538
21	41457021	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.5
21	41457022	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.214286
21	41457034	A->G	+	ENSG00000157601	MX1	protein_coding	Intergenic	.	.	Alu	0.125
21	41462472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
21	42240568	A->G	+	ENSG00000160179	ABCG1	protein_coding	Intergenic	.	.	Alu	0.166667
21	42241537	A->G	+	ENSG00000160179	ABCG1	protein_coding	Intergenic	.	.	Alu	0.166667
21	42241557	A->G	+	ENSG00000160179	ABCG1	protein_coding	Intergenic	.	.	Alu	0.142857
21	42242445	A->G	+	ENSG00000160179	ABCG1	protein_coding	Intergenic	.	.	Alu	0.2
21	42838474	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
21	43723208	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.133333
21	43724580	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.181818
21	43724600	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.285714
21	43731032	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.25
21	43731082	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.153846
21	43731098	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.176471
21	43742535	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.3
21	43746616	A->G	+	ENSG00000160209	PDXK	protein_coding	Intergenic	.	.	Alu	0.2
21	43765613	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
21	43765625	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
21	44075550	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.272727
21	44075585	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.166667
21	44093006	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.166667
21	44093031	A->G	+	ENSG00000160218	TRAPPC10	protein_coding	Intergenic	.	.	Alu	0.2
21	44232859	A->G	-	ENSG00000160223	ICOSLG	protein_coding	Intergenic	.	.	Alu	0.285714
21	44232886	A->G	-	ENSG00000160223	ICOSLG	protein_coding	Intergenic	.	.	Alu	0.25
21	44869566	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.333333
21	44869571	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.272727
21	44870284	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.285714
21	44870324	A->G	-	ENSG00000183255	PTTG1IP	protein_coding	Intergenic	.	.	Alu	0.181818
21	45650530	A->G	+	ENSG00000183570	PCBP3	protein_coding	Intergenic	.	.	Alu	0.2
22	17212286	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.294118
22	17212473	A->G	-	ENSG00000093072	ADA2	protein_coding	Intergenic	.	.	Alu	0.230769
22	17640718	A->G	+	ENSG00000099968	BCL2L13	protein_coding	Intergenic	.	.	Alu	0.2
22	17736349	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.181818
22	17736397	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.181818
22	17755679	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.461538
22	17755724	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.3
22	17767868	A->G	-	ENSG00000015475	BID	protein_coding	Intergenic	.	.	Alu	0.125
22	18160088	A->G	+	ENSG00000184979	USP18	protein_coding	Intergenic	.	.	Alu	0.117647
22	20562036	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.642857
22	20572647	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.105263
22	20572663	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.6875
22	20572664	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.470588
22	20572681	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.125
22	20572733	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.166667
22	20572737	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.2
22	20573151	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.263158
22	20573168	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.181818
22	20573177	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.423077
22	20573230	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.192308
22	20573238	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.16
22	20573239	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.24
22	20573242	A->G	+	ENSG00000099917	MED15	protein_coding	Intergenic	.	.	Alu	0.6
22	21777582	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.166667
22	21782833	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.454545
22	21790586	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.727273
22	21790590	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	21790998	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.6
22	21793651	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.2
22	21864313	A->G	-	ENSG00000100030	MAPK1	protein_coding	Intergenic	.	.	Alu	0.153846
22	24041975	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.181818
22	24041983	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.384615
22	24042045	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.230769
22	24042051	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.153846
22	24042052	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.230769
22	24042053	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.769231
22	24042116	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.285714
22	24042165	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.142857
22	24173580	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.5
22	24173581	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.4
22	24173714	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.133333
22	24173737	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.266667
22	24173740	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.125
22	24173755	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.117647
22	24173789	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.230769
22	24174403	A->G	+	ENSG00000099991	CABIN1	protein_coding	Intergenic	.	.	Alu	0.25
22	24562072	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.333333
22	24573145	A->G	+	ENSG00000100028	SNRPD3	protein_coding	Intergenic	.	.	Alu	0.0681818
22	29278945	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.133333
22	29287312	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.05
22	29287342	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.137255
22	29287897	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.194444
22	29297280	A->G	+	ENSG00000182944	EWSR1	protein_coding	Intergenic	.	.	Alu	0.153846
22	29341000	A->G	-	ENSG00000100280	AP1B1	protein_coding	Intergenic	.	.	Alu	0.0892857
22	29341315	A->G	-	ENSG00000100280	AP1B1	protein_coding	Intergenic	.	.	Alu	0.0747664
22	29345432	A->G	-	ENSG00000100280	AP1B1	protein_coding	Intergenic	.	.	Alu	0.166667
22	29500269	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
22	29500281	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
22	29500283	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
22	29500308	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
22	29502544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
22	29503675	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
22	29504409	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
22	29504415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.583333
22	29504421	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
22	29504422	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
22	30268640	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
22	30268757	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
22	30268762	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
22	30268769	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
22	30269373	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
22	30269427	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
22	30269435	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
22	30351638	A->G	-	ENSG00000099995	SF3A1	protein_coding	Intergenic	.	.	Alu	0.166667
22	30637378	A->G	+	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.285714
22	30637417	A->G	+	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.230769
22	30660998	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.318182
22	30661067	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.363636
22	30661078	A->G	-	ENSG00000100036	SLC35E4	protein_coding	Intergenic	.	.	Alu	0.214286
22	31281421	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0229885
22	31285276	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0735294
22	31285928	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0394737
22	31285993	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	31286206	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0985915
22	31287089	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0422535
22	31287199	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0206186
22	31287201	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0288462
22	31287245	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0566038
22	31287508	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0350877
22	31287511	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0350877
22	31287531	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0294118
22	31288156	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0289855
22	31288159	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0675676
22	31288180	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0833333
22	31288197	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0434783
22	31288211	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0697674
22	31288213	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.1
22	31288255	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.108108
22	31288292	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.0681818
22	31288360	A->G	-	ENSG00000100100	PIK3IP1	protein_coding	Intergenic	.	.	Alu	0.176471
22	35269299	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.2
22	35269310	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.2
22	35269323	A->G	+	ENSG00000100281	HMGXB4	protein_coding	Intergenic	.	.	Alu	0.181818
22	35320861	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.2
22	35321499	A->G	+	ENSG00000100284	TOM1	protein_coding	Intergenic	.	.	Alu	0.166667
22	35655676	A->G	+	ENSG00000221963	APOL6	protein_coding	Intergenic	.	.	Alu	0.5
22	35655813	A->G	+	ENSG00000221963	APOL6	protein_coding	Intergenic	.	.	Alu	0.25
22	36158630	A->G	-	ENSG00000128284	APOL3	protein_coding	Intergenic	.	.	Alu	0.125
22	36159987	A->G	-	ENSG00000128284	APOL3	protein_coding	Intergenic	.	.	Alu	0.153846
22	36280033	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
22	36308397	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.2
22	36310187	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36310351	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.133333
22	36310379	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.0526316
22	36310402	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.114286
22	36310405	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.34375
22	36345962	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.2
22	36346878	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.2
22	36365972	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.25
22	36366019	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36366025	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.125
22	36366040	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.142857
22	36372406	A->G	-	ENSG00000100345	MYH9	protein_coding	Intergenic	.	.	Alu	0.153846
22	36517777	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.107143
22	36517778	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.214286
22	36517916	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.0606061
22	36517924	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.0571429
22	36517925	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.0571429
22	36517926	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.176471
22	36517927	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.411765
22	36517930	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.4
22	36517967	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.0555556
22	36518286	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.2
22	36518323	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.105263
22	36518334	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.1
22	36518406	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.16
22	36518407	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.125
22	36518475	A->G	-	ENSG00000100353	EIF3D	protein_coding	Intergenic	.	.	Alu	0.733333
22	37131058	A->G	-	ENSG00000100385	IL2RB	protein_coding	Intergenic	.	.	Alu	0.125
22	37857901	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.571429
22	37857914	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.153846
22	37857932	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.466667
22	37857988	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.545455
22	37858055	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.272727
22	37871024	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.25
22	37872174	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.642857
22	37872187	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.235294
22	37872217	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.380952
22	37872218	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intergenic	.	.	Alu	0.454545
22	38209345	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.133333
22	38210811	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.2
22	38211002	A->G	+	ENSG00000185022	MAFF	protein_coding	Intergenic	.	.	Alu	0.25
22	38502193	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0634921
22	38502208	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0416667
22	38502291	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.111111
22	38502302	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.0689655
22	38502362	A->G	-	ENSG00000100201	DDX17	protein_coding	Intergenic	.	.	Alu	0.102564
22	38690495	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0909091
22	38690499	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.08
22	38690518	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0869565
22	38690519	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0869565
22	38690540	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.35
22	38690541	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.1
22	38690581	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	38690596	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0869565
22	38690606	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0666667
22	38690655	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	38690672	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.619048
22	38690678	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.105263
22	38690838	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.08
22	38690855	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.173913
22	38690858	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	38690864	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0967742
22	38690872	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0606061
22	38690899	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.173913
22	38690904	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.136364
22	38690921	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.1
22	38690944	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.125
22	38690958	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0689655
22	38691036	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.192308
22	38691265	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0789474
22	38691270	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.05
22	38691742	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0416667
22	38693658	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0338983
22	38694668	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	38694673	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.153846
22	38694780	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	38695626	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0769231
22	38695937	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.0588235
22	38695970	A->G	-	ENSG00000100221	JOSD1	protein_coding	Intergenic	.	.	Alu	0.105263
22	38711572	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.142857
22	38711680	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.136364
22	38711764	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.08
22	38711981	A->G	+	ENSG00000100226	GTPBP1	protein_coding	Intergenic	.	.	Alu	0.411765
22	38744714	A->G	-	ENSG00000100242	SUN2	protein_coding	Intergenic	.	.	Alu	0.111111
22	38744739	A->G	-	ENSG00000100242	SUN2	protein_coding	Intergenic	.	.	Alu	0.111111
22	38744778	A->G	-	ENSG00000100242	SUN2	protein_coding	Intergenic	.	.	Alu	0.133333
22	38747285	A->G	-	ENSG00000100242	SUN2	protein_coding	Intergenic	.	.	Alu	0.1
22	38953536	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.178571
22	38953731	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.538462
22	38953736	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.25
22	38954093	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.3125
22	38954097	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.8125
22	38954120	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.0909091
22	38954124	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.0882353
22	38954126	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.294118
22	38954257	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.943396
22	38954316	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.521739
22	38954328	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.47619
22	38954640	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.363636
22	38954641	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intergenic	.	.	Alu	0.727273
22	39961045	A->G	+	ENSG00000100351	GRAP2	protein_coding	Intergenic	.	.	Alu	0.2
22	39961046	A->G	+	ENSG00000100351	GRAP2	protein_coding	Intergenic	.	.	Alu	0.5
22	39961085	A->G	+	ENSG00000100351	GRAP2	protein_coding	Intergenic	.	.	Alu	0.2
22	39961144	A->G	+	ENSG00000100351	GRAP2	protein_coding	Intergenic	.	.	Alu	0.333333
22	40955338	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.1
22	40957764	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.25
22	40957765	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.166667
22	40957777	A->G	+	ENSG00000100387	RBX1	protein_coding	Intergenic	.	.	Alu	0.25
22	41128779	A->G	+	ENSG00000100393	EP300	protein_coding	Intergenic	.	.	Alu	0.2
22	41259894	A->G	-	ENSG00000100401	RANGAP1	protein_coding	Intergenic	.	.	Alu	0.2
22	41282616	A->G	-	ENSG00000100401	RANGAP1	protein_coding	Intergenic	.	.	Alu	0.333333
22	41463818	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.333333
22	41463834	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.111111
22	41465625	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.166667
22	41465637	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.166667
22	41465688	A->G	-	ENSG00000100410	PHF5A	protein_coding	Intergenic	.	.	Alu	0.2
22	41472722	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.272727
22	41472725	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.272727
22	41522205	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.181818
22	41522222	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.153846
22	41522226	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.230769
22	41522230	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.181818
22	41522254	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.866667
22	41522260	A->G	+	ENSG00000100412	ACO2	protein_coding	Intergenic	.	.	Alu	0.133333
22	41601860	A->G	-	ENSG00000100418	DESI1	protein_coding	Intergenic	.	.	Alu	0.153846
22	41623801	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.2
22	41628339	A->G	+	ENSG00000196419	XRCC6	protein_coding	Intergenic	.	.	Alu	0.166667
22	41677268	A->G	-	ENSG00000100138	SNU13	protein_coding	Intergenic	.	.	Alu	0.117647
22	41796746	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.133333
22	41796763	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.133333
22	41796826	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.3
22	41797569	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.2
22	41797600	A->G	+	ENSG00000167077	MEI1	protein_coding	Intergenic	.	.	Alu	0.142857
22	42517043	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.181818
22	42517056	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.153846
22	42517057	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.230769
22	42517112	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.181818
22	42517154	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.111111
22	42517169	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.266667
22	42517170	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.266667
22	42517196	A->G	-	ENSG00000189306	RRP7A	protein_coding	Intergenic	.	.	Alu	0.153846
22	42594005	A->G	-	ENSG00000100227	POLDIP3	protein_coding	Intergenic	.	.	Alu	0.166667
22	42828302	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.2
22	42828434	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.153846
22	42836241	A->G	-	ENSG00000242247	ARFGAP3	protein_coding	Intergenic	.	.	Alu	0.142857
22	45333252	A->G	+	ENSG00000100376	FAM118A	protein_coding	Intergenic	.	.	Alu	0.2
22	46697742	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.2
22	46698688	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.125
22	46698825	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.2
22	46698860	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.3
22	46723562	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.363636
22	46727400	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.142857
22	46729142	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.08
22	46729253	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.103448
22	46733019	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.142857
22	46733418	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.117647
22	46733431	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.411765
22	46733432	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.111111
22	46733561	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.133333
22	46733567	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.153846
22	46733825	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.183673
22	46733845	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.166667
22	46733876	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.183673
22	46733893	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.0377358
22	46733936	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.0731707
22	46733953	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.30303
22	46733954	A->G	-	ENSG00000100422	CERK	protein_coding	Intergenic	.	.	Alu	0.133333
22	49816727	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.117647
22	49816729	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.222222
22	49818643	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0952381
22	49818723	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.111111
22	49818764	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.125
22	49819431	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.2
22	49819691	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.2
22	49819728	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.642857
22	49819730	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.4
22	49820047	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.166667
22	49821671	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.2
22	49822674	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.0740741
22	49822677	A->G	-	ENSG00000100425	BRD1	protein_coding	Intergenic	.	.	Alu	0.166667
22	50191174	A->G	+	ENSG00000170638	TRABD	protein_coding	Intergenic	.	.	Alu	0.142857
22	50207235	A->G	+	ENSG00000073169	SELENOO	protein_coding	Intergenic	.	.	Alu	0.0952381
22	50540045	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0588235
22	50624079	A->G	-	ENSG00000100299	ARSA	protein_coding	Intergenic	.	.	Alu	0.2
1	108755410	A->G	+	ENSG00000116266	STXBP3	protein_coding	Intergenic	.	.	Alu	0.2
1	109010399	A->G	-	ENSG00000085433	WDR47	protein_coding	Intergenic	.	.	Alu	0.2
1	109063514	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0743802
1	109063531	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0769231
1	109063539	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0298507
1	109063547	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0222222
1	109063550	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.225806
1	109063551	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.091954
1	109063557	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0235294
1	109063574	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0357143
1	109063580	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.025974
1	109063598	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0447761
1	109063606	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0512821
1	109063611	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0315789
1	109063613	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.02
1	109063620	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0505051
1	109063669	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.046729
1	109063684	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.101852
1	109063721	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.0849057
1	109063992	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.142857
1	109064033	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.210526
1	109064035	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.421053
1	109064075	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.1875
1	109064076	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.214286
1	109064089	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.210526
1	109064101	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.375
1	109068212	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.357143
1	109068286	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.3
1	109068299	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.105263
1	109068880	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.230769
1	109068892	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.1875
1	109068940	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.12
1	109068950	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.181818
1	109072583	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.142857
1	109072644	A->G	-	ENSG00000197780	TAF13	protein_coding	Intergenic	.	.	Alu	0.214286
1	109407150	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.2
1	109407259	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.272727
1	109407896	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.181818
1	109408828	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.166667
1	109409321	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.142857
1	109409697	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.384615
1	109409711	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.384615
1	109409792	A->G	-	ENSG00000143106	PSMA5	protein_coding	Intergenic	.	.	Alu	0.4
1	110906363	A->G	+	.	.	.	Intergenic	.	.	Alu	0.08
1	112655392	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.105263
1	112655611	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.0740741
1	112655632	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.210526
1	112655663	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.15
1	112655666	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.333333
1	112655692	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.166667
1	112655702	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.277778
1	112662242	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.125
1	112665448	A->G	+	ENSG00000116489	CAPZA1	protein_coding	Intergenic	.	.	Alu	0.2
1	112945880	A->G	-	ENSG00000155380	SLC16A1	protein_coding	Intergenic	.	.	Alu	0.272727
1	113827727	A->G	-	ENSG00000231128	AL137856.1	antisense	Intergenic	.	.	Alu	0.103448
1	113827748	A->G	-	ENSG00000231128	AL137856.1	antisense	Intergenic	.	.	Alu	0.2
1	113827752	A->G	-	ENSG00000231128	AL137856.1	antisense	Intergenic	.	.	Alu	0.416667
1	113827753	A->G	-	ENSG00000231128	AL137856.1	antisense	Intergenic	.	.	Alu	0.56
1	113827814	A->G	-	ENSG00000231128	AL137856.1	antisense	Intergenic	.	.	Alu	0.111111
1	113828886	A->G	-	ENSG00000231128	AL137856.1	antisense	Intergenic	.	.	Alu	0.125
1	113828902	A->G	-	ENSG00000231128	AL137856.1	antisense	Intergenic	.	.	Alu	0.2
1	113828907	A->G	-	ENSG00000231128	AL137856.1	antisense	Intergenic	.	.	Alu	0.5625
1	113855244	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.133333
1	113855329	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.266667
1	113855448	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.571429
1	113856179	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.322581
1	113856182	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.125
1	113856183	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.0606061
1	113856197	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.0571429
1	113856214	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.1
1	113856221	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.1
1	113866399	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.181818
1	113866477	A->G	-	ENSG00000134242	PTPN22	protein_coding	Intergenic	.	.	Alu	0.153846
1	114753660	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.0833333
1	114753833	A->G	-	ENSG00000009307	CSDE1	protein_coding	Intergenic	.	.	Alu	0.181818
1	117610608	A->G	+	ENSG00000183508	TENT5C	protein_coding	Intergenic	.	.	Alu	0.0571429
1	117610640	A->G	+	ENSG00000183508	TENT5C	protein_coding	Intergenic	.	.	Alu	0.181818
1	117610789	A->G	+	ENSG00000183508	TENT5C	protein_coding	Intergenic	.	.	Alu	0.0625
1	117610790	A->G	+	ENSG00000183508	TENT5C	protein_coding	Intergenic	.	.	Alu	0.0612245
1	120920238	A->G	+	ENSG00000226067	LINC00623	lincRNA	Intergenic	.	.	Alu	0.545455
1	120921819	A->G	+	ENSG00000226067	LINC00623	lincRNA	Intergenic	.	.	Alu	1
1	145775458	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.4
1	145775464	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.166667
1	145775493	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.166667
1	145775498	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.333333
1	145775560	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.2
1	145782451	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.636364
1	145782452	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.545455
1	145783000	A->G	-	ENSG00000265491	RNF115	protein_coding	Intergenic	.	.	Alu	0.153846
1	146387643	A->G	+	ENSG00000277406	AC245407.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.513514
1	150339647	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.416667
1	150339931	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.230769
1	150339933	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.357143
1	150340944	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.2
1	150341764	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.461538
1	150341783	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.166667
1	150341869	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.4
1	150341884	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.307692
1	150341951	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.153846
1	150341966	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.25
1	150341978	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.153846
1	150348305	A->G	+	ENSG00000117360	PRPF3	protein_coding	Intergenic	.	.	Alu	0.166667
1	150571326	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.112903
1	150571331	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0483871
1	150571344	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.0526316
1	150571407	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.16129
1	150571412	A->G	-	ENSG00000203804	ADAMTSL4-AS1	processed_transcript	Intergenic	.	.	Alu	0.111111
1	150580631	A->G	+	.	.	.	Intergenic	.	.	Alu	0.103448
1	150612592	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0595238
1	150612594	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.125
1	150612624	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.05
1	150612653	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0833333
1	150613092	A->G	+	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.0769231
1	150613096	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.125
1	150618594	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.25
1	150620706	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.133333
1	150620917	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.153846
1	150620956	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.2
1	150620991	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.214286
1	150621016	A->G	-	ENSG00000143420	ENSA	protein_coding	Intergenic	.	.	Alu	0.142857
1	150749862	A->G	-	ENSG00000163131	CTSS	protein_coding	Intergenic	.	.	Alu	0.2
1	150930699	A->G	+	ENSG00000143379	SETDB1	protein_coding	Intergenic	.	.	Alu	0.2
1	151434350	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.416667
1	151434352	A->G	-	ENSG00000143442	POGZ	protein_coding	Intergenic	.	.	Alu	0.25
1	151871095	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	151871153	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
1	151871159	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
1	153639954	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.0952381
1	153639957	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.3
1	153640518	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.153846
1	153640551	A->G	+	ENSG00000160679	CHTOP	protein_coding	Intergenic	.	.	Alu	0.1875
1	153994148	A->G	+	ENSG00000143552	NUP210L	protein_coding	Intergenic	.	.	Alu	0.142857
1	154163055	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.1
1	154164419	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.166667
1	154179840	A->G	-	ENSG00000143549	TPM3	protein_coding	Intergenic	.	.	Alu	0.111111
1	154411793	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.181818
1	154444715	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.25
1	154444756	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.272727
1	154447771	A->G	+	ENSG00000160712	IL6R	protein_coding	Intergenic	.	.	Alu	0.4
1	154964761	A->G	-	ENSG00000160691	SHC1	protein_coding	Intergenic	.	.	Alu	0.181818
1	154987303	A->G	+	ENSG00000160688	FLAD1	protein_coding	Intergenic	.	.	Alu	0.166667
1	155566384	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
1	155669257	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155683612	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intergenic	.	.	Alu	0.111111
1	155905479	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.2
1	155907360	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.5
1	155907364	A->G	-	ENSG00000143622	RIT1	protein_coding	Intergenic	.	.	Alu	0.181818
1	155918349	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.181818
1	155931702	A->G	-	ENSG00000132680	KHDC4	protein_coding	Intergenic	.	.	Alu	0.3
1	155956558	A->G	-	ENSG00000116584	ARHGEF2	protein_coding	Intergenic	.	.	Alu	0.2
1	156116798	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.181818
1	156119464	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.105263
1	156119482	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.105263
1	156132018	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.0909091
1	156132019	A->G	+	ENSG00000160789	LMNA	protein_coding	Intergenic	.	.	Alu	0.142857
1	156214725	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.2
1	156214730	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.2
1	156214731	A->G	+	ENSG00000260238	PMF1-BGLAP	protein_coding	Intergenic	.	.	Alu	0.3
1	156469320	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0882353
1	156469325	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.263158
1	156469326	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.135135
1	156469379	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0909091
1	156469382	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0416667
1	156469422	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.177778
1	156469426	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0425532
1	156469454	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0425532
1	156469525	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.192308
1	156469644	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.352941
1	156469645	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.166667
1	156469684	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.181818
1	156469764	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.266667
1	156469786	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.125
1	156469799	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.190476
1	156469834	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.190476
1	156470240	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.1
1	156470272	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.153846
1	156470273	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.166667
1	156471268	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0487805
1	156471327	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.114286
1	156473135	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0625
1	156473185	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.0487805
1	156474277	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.1
1	156474301	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.117647
1	156474367	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.1875
1	156474436	A->G	-	ENSG00000116604	MEF2D	protein_coding	Intergenic	.	.	Alu	0.285714
1	156716603	A->G	-	.	.	.	Intergenic	.	.	Alu	0.416667
1	156716606	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
1	156805292	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
1	156810096	A->G	-	ENSG00000027869	SH2D2A	protein_coding	Intergenic	.	.	Alu	0.166667
1	156813544	A->G	-	ENSG00000027869	SH2D2A	protein_coding	Intergenic	.	.	Alu	0.0588235
1	160348007	A->G	+	ENSG00000162736	NCSTN	protein_coding	Intergenic	.	.	Alu	0.2
1	161062643	A->G	-	ENSG00000186517	ARHGAP30	protein_coding	Intergenic	.	.	Alu	0.181818
1	161507248	A->G	+	ENSG00000143226	FCGR2A	protein_coding	Intergenic	.	.	Alu	0.15
1	161507385	A->G	+	ENSG00000143226	FCGR2A	protein_coding	Intergenic	.	.	Alu	0.103448
1	161517585	A->G	+	ENSG00000143226	FCGR2A	protein_coding	Intergenic	.	.	Alu	0.214286
1	161866887	A->G	+	ENSG00000118217	ATF6	protein_coding	Intergenic	.	.	Alu	0.133333
1	161866924	A->G	+	ENSG00000118217	ATF6	protein_coding	Intergenic	.	.	Alu	0.133333
1	162573703	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	162573715	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.4
1	162573802	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0714286
1	162573817	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.24
1	162573843	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.3125
1	162573879	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	162573908	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.384615
1	162573909	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	162573913	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.153846
1	162574162	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.285714
1	162574167	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.470588
1	162574192	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.277778
1	162574196	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	162574219	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.333333
1	162574248	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.125
1	162574259	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	162574327	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.103448
1	162574336	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.269231
1	162574354	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	162574355	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.225806
1	162574362	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	162590985	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.105263
1	162590993	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.1
1	162591037	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.2
1	162591054	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.12
1	162591110	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0689655
1	162591112	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0769231
1	162591660	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	162591669	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.142857
1	162592169	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.125
1	162592226	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0952381
1	162592229	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.0909091
1	162592243	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.222222
1	162592295	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.125
1	162592324	A->G	+	ENSG00000117143	UAP1	protein_coding	Intergenic	.	.	Alu	0.470588
1	167481030	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.133333
1	167481107	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.125
1	167481204	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.230769
1	167481211	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.153846
1	167481235	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.428571
1	167486952	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.2
1	167487809	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.181818
1	167490716	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.2
1	167490831	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.25
1	167506999	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.272727
1	167507029	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.133333
1	167507035	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.4
1	167507061	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.333333
1	167507191	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.428571
1	167507192	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.142857
1	167507577	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.142857
1	167509283	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.181818
1	167509284	A->G	-	ENSG00000198821	CD247	protein_coding	Intergenic	.	.	Alu	0.181818
1	171487128	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.208333
1	171487138	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.172414
1	171487140	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.5
1	171487154	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.137931
1	171487738	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.2
1	171496849	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.153846
1	171500536	A->G	+	ENSG00000117523	PRRC2C	protein_coding	Intergenic	.	.	Alu	0.2
1	173861217	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
1	173861707	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
1	173861972	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
1	173862695	A->G	-	.	.	.	Intergenic	.	.	Alu	0.217391
1	173863138	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
1	173863142	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
1	173863185	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
1	179890803	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.181818
1	179890829	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.133333
1	179890858	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.25
1	179890859	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	Intergenic	.	.	Alu	0.25
1	182863963	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.2
1	182864281	A->G	+	ENSG00000135829	DHX9	protein_coding	Intergenic	.	.	Alu	0.315789
1	183585516	A->G	-	ENSG00000116701	NCF2	protein_coding	Intergenic	.	.	Alu	0.153846
1	185290097	A->G	-	ENSG00000116668	SWT1	protein_coding	Intergenic	.	.	Alu	0.0625
1	193095426	A->G	-	ENSG00000023572	GLRX2	protein_coding	Intergenic	.	.	Alu	0.2
1	201959720	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.166667
1	201960235	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.230769
1	201960253	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.2
1	201960387	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.0952381
1	201961205	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.2
1	201961590	A->G	+	ENSG00000134375	TIMM17A	protein_coding	Intergenic	.	.	Alu	0.333333
1	202149122	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.05
1	202149596	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.0512821
1	202149610	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intergenic	.	.	Alu	0.0714286
1	202948888	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.2
1	202948889	A->G	-	ENSG00000159346	ADIPOR1	protein_coding	Intergenic	.	.	Alu	0.2
1	203313219	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1
1	203776267	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
1	203776270	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
1	203777218	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	203777235	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
1	203777273	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	203777279	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
1	203777282	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
1	203777283	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	203777304	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
1	203777308	A->G	+	.	.	.	Intergenic	.	.	Alu	0.222222
1	203777318	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	203777370	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
1	203777412	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
1	203777434	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	203777435	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
1	203777904	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
1	203777927	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
1	203837713	A->G	+	ENSG00000058673	ZC3H11A	protein_coding	Intergenic	.	.	Alu	0.2
1	204400201	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.454545
1	204402621	A->G	-	ENSG00000226330	AL606489.1	antisense	Intergenic	.	.	Alu	0.3
1	204506584	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
1	204534513	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.272727
1	204534536	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.285714
1	204534587	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0689655
1	204534588	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.172414
1	204534591	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.115385
1	204534600	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.291667
1	204534653	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.133333
1	204535698	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.6
1	204535780	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.0909091
1	204536006	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.266667
1	204536007	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.6
1	204536012	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.428571
1	204536042	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.5
1	204536050	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.181818
1	204536197	A->G	+	ENSG00000198625	MDM4	protein_coding	Intergenic	.	.	Alu	0.454545
1	206561759	A->G	+	ENSG00000266094	RASSF5	protein_coding	Intergenic	.	.	Alu	0.0666667
1	206562866	A->G	+	ENSG00000266094	RASSF5	protein_coding	Intergenic	.	.	Alu	0.142857
1	206577073	A->G	+	ENSG00000143486	EIF2D	protein_coding	Intergenic	.	.	Alu	0.0952381
1	224136016	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.4
1	224136017	A->G	+	ENSG00000143756	FBXO28	protein_coding	Intergenic	.	.	Alu	0.4
1	224184879	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.166667
1	224184880	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.153846
1	224184928	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.125
1	224185946	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.142857
1	224191442	A->G	+	ENSG00000143753	DEGS1	protein_coding	Intergenic	.	.	Alu	0.272727
1	224390768	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.6
1	224397270	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.15
1	224411925	A->G	-	ENSG00000162923	WDR26	protein_coding	Intergenic	.	.	Alu	0.1
1	225997578	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.111111
1	225997594	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.181818
1	225997673	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.181818
1	225997886	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.105263
1	225997896	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.214286
1	225997964	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.1875
1	225997970	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.3125
1	225997992	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.166667
1	225998045	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.0909091
1	225998089	A->G	-	ENSG00000143751	SDE2	protein_coding	Intergenic	.	.	Alu	0.125
1	226067661	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.0952381
1	226069751	A->G	+	ENSG00000163041	H3F3A	protein_coding	Intergenic	.	.	Alu	0.3
1	226718473	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.111111
1	226718518	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.0555556
1	226718519	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.108108
1	226720807	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.1875
1	226720808	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.181818
1	226720863	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.0833333
1	226720877	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.277778
1	226720880	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.263158
1	226720894	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.173913
1	226720920	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.105263
1	226720942	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.222222
1	226720959	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.214286
1	226721989	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.142857
1	226729227	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.194444
1	226729313	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.115385
1	226729609	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.1875
1	226729614	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.285714
1	226729676	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.2
1	226729716	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.210526
1	226729743	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.117647
1	226729755	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.173913
1	226729758	A->G	-	ENSG00000143772	ITPKB	protein_coding	Intergenic	.	.	Alu	0.0833333
1	228139703	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0869565
1	229451154	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.153846
1	229451244	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.25
1	229451250	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.166667
1	229498673	A->G	-	ENSG00000069248	NUP133	protein_coding	Intergenic	.	.	Alu	0.2
1	235171674	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235172483	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235232618	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.166667
1	235233256	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.3
1	235258285	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235310791	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.181818
1	235310795	A->G	-	ENSG00000054267	ARID4B	protein_coding	Intergenic	.	.	Alu	0.153846
1	235826709	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.105263
1	235826851	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0588235
1	235826878	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0408163
1	235827119	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0625
1	235827147	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.111111
1	235827160	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0769231
1	235827284	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.08
1	235827343	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0697674
1	235827347	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.05
1	235827355	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.047619
1	235827361	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.155556
1	235827363	A->G	-	ENSG00000143669	LYST	protein_coding	Intergenic	.	.	Alu	0.0434783
1	236600373	A->G	-	ENSG00000119285	HEATR1	protein_coding	Intergenic	.	.	Alu	0.142857
1	243244663	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.2
1	243244664	A->G	-	ENSG00000143702	CEP170	protein_coding	Intergenic	.	.	Alu	0.2
1	244420958	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.2
1	244421734	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.105263
1	244421813	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.5
1	244433114	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.454545
1	244441601	A->G	-	ENSG00000035687	ADSS	protein_coding	Intergenic	.	.	Alu	0.133333
1	246594006	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.181818
1	246660579	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.272727
1	246660628	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.666667
1	246660698	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.153846
1	246660990	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.9
1	246661236	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.5
1	246661237	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.5
1	246661244	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.454545
1	246661301	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.5
1	246661332	A->G	+	ENSG00000162852	CNST	protein_coding	Intergenic	.	.	Alu	0.363636
1	246929969	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.181818
1	246930702	A->G	-	ENSG00000153207	AHCTF1	protein_coding	Intergenic	.	.	Alu	0.416667
1	247099774	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
1	247128611	A->G	+	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.4
1	247155618	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.0909091
1	247155657	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.0512821
1	247155672	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.444444
1	247155798	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.103448
1	247155814	A->G	-	ENSG00000196418	ZNF124	protein_coding	Intergenic	.	.	Alu	0.0869565
1	247427581	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.416667
1	247428493	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.133333
1	247428530	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.230769
1	247428973	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.166667
1	247430792	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.636364
1	247430796	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.2
1	247430836	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.2
1	247430860	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.25
1	247430879	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.454545
1	247431952	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.333333
1	247432014	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.181818
1	247432075	A->G	+	ENSG00000162711	NLRP3	protein_coding	Intergenic	.	.	Alu	0.105263
2	101274854	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0204082
2	101275190	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0307692
2	101275250	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0241935
2	101275359	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0298507
2	101277457	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.111111
2	101277458	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.166667
2	101277547	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.307692
2	101278248	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.208333
2	101280048	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.263158
2	101280119	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.125
2	101280124	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.214286
2	101280917	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0540541
2	101280972	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.037037
2	101280982	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0454545
2	101280986	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0444444
2	101281028	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.577778
2	101284423	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.153846
2	101284425	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.461538
2	101284498	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.444444
2	101284992	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.117647
2	101285018	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101285019	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101285073	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1
2	101285091	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.25
2	101287287	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0363636
2	101297414	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.105263
2	101297425	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.375
2	101297449	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1
2	101298228	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.208333
2	101298249	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.15
2	101298301	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.230769
2	101298325	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.117647
2	101298343	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.25
2	101298349	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.4375
2	101298384	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.357143
2	101298993	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.105263
2	101300569	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101300642	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0909091
2	101300644	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.130435
2	101300648	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.304348
2	101301585	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.368421
2	101302858	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.176471
2	101302928	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.173913
2	101303188	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.111111
2	101303254	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.133333
2	101303263	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.214286
2	101304230	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.214286
2	101304272	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.304348
2	101304285	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101304334	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.1
2	101304390	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.3125
2	101304913	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.117647
2	101304914	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.176471
2	101304969	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.105263
2	101305009	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0833333
2	101305023	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.210526
2	101305103	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.111111
2	101307240	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.127273
2	101307280	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0638298
2	101307406	A->G	-	ENSG00000163162	RNF149	protein_coding	Intergenic	.	.	Alu	0.0588235
2	105860056	A->G	+	ENSG00000071051	NCK2	protein_coding	Intergenic	.	.	Alu	0.166667
2	108453674	A->G	+	ENSG00000135968	GCC2	protein_coding	Intergenic	.	.	Alu	0.153846
2	108477915	A->G	+	ENSG00000135968	GCC2	protein_coding	Intergenic	.	.	Alu	0.2
2	108596644	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	108596702	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	108596716	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.214286
2	108596768	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.153846
2	108597171	A->G	+	ENSG00000169756	LIMS1	protein_coding	Intergenic	.	.	Alu	0.125
2	108722717	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.2
2	108723457	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.230769
2	108738677	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.214286
2	108738709	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0588235
2	108738728	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0588235
2	108738729	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.114286
2	108738732	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.228571
2	108738733	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.114286
2	108738795	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.15625
2	108738830	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.2
2	108738839	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.148148
2	108738904	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0689655
2	108739288	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.142857
2	108739315	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.2
2	108739867	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.181818
2	108742421	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	108742443	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.111111
2	108742486	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0735294
2	108742487	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0597015
2	108742511	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.15873
2	108742547	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0701754
2	108742566	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0327869
2	108742808	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.37037
2	108742820	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0740741
2	108742850	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.242424
2	108742869	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0571429
2	108742893	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0526316
2	108742906	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.205882
2	108742918	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.333333
2	108742928	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0555556
2	108742996	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.4
2	108743051	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.235294
2	108743460	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.08
2	108743541	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.12
2	108744146	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.307692
2	108744218	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.111111
2	108744228	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.266667
2	108744242	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.190476
2	108744250	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0909091
2	108744257	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.136364
2	108744284	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	108744293	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.35
2	108744300	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.125
2	108744325	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.107143
2	108744345	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.137931
2	108750095	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.3
2	108750101	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.272727
2	108774339	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	108774365	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.176471
2	108774386	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.037037
2	108774459	A->G	+	ENSG00000153201	RANBP2	protein_coding	Intergenic	.	.	Alu	0.04
2	111153577	A->G	+	ENSG00000172965	MIR4435-2HG	lincRNA	Intergenic	.	.	Alu	0.642857
2	111473973	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.333333
2	111473974	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.2
2	111488622	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.214286
2	111488743	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.25
2	111490141	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.142857
2	111490147	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.227273
2	111490218	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.45
2	111490226	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.263158
2	111490231	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.15
2	111490270	A->G	-	ENSG00000285016	AC017002.6	processed_transcript	Intergenic	.	.	Alu	0.461538
2	112408810	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.4
2	112408836	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.3
2	112415273	A->G	-	ENSG00000169629	RGPD8	protein_coding	Intergenic	.	.	Alu	0.545455
2	112653870	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0588235
2	112653893	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0377358
2	112653896	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0377358
2	112655135	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.44
2	112655149	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	112655221	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.325581
2	112655230	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.0526316
2	112655245	A->G	+	ENSG00000144136	SLC20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	113187784	A->G	+	ENSG00000125637	PSD4	protein_coding	Intergenic	.	.	Alu	0.285714
2	113187795	A->G	+	ENSG00000125637	PSD4	protein_coding	Intergenic	.	.	Alu	0.333333
2	113191220	A->G	+	ENSG00000125637	PSD4	protein_coding	Intergenic	.	.	Alu	0.25
2	113191224	A->G	+	ENSG00000125637	PSD4	protein_coding	Intergenic	.	.	Alu	0.25
2	113585454	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
2	113708448	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.272727
2	113708594	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.166667
2	113708623	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.142857
2	113748330	A->G	-	ENSG00000115084	SLC35F5	protein_coding	Intergenic	.	.	Alu	0.454545
2	113947533	A->G	+	ENSG00000115091	ACTR3	protein_coding	Intergenic	.	.	Alu	0.133333
2	117982119	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.272727
2	117982120	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.636364
2	117992516	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.1
2	117992517	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.105263
2	117993871	A->G	-	ENSG00000125633	CCDC93	protein_coding	Intergenic	.	.	Alu	0.117647
2	121729625	A->G	-	ENSG00000155438	NIFK	protein_coding	Intergenic	.	.	Alu	0.384615
2	127333021	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.142857
2	127333877	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0869565
2	127333882	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.130435
2	127333896	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.15
2	127333907	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.1
2	127333933	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.153846
2	127333999	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.157895
2	127334012	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.08
2	127334016	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0740741
2	127334037	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0588235
2	127334066	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0967742
2	127334086	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.242424
2	127334681	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.0833333
2	127344961	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127345003	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.142857
2	127348153	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.2
2	127366301	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.133333
2	127368239	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.4
2	127375507	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.3
2	127377042	A->G	-	ENSG00000169967	MAP3K2	protein_coding	Intergenic	.	.	Alu	0.307692
2	127784660	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.181818
2	127807959	A->G	-	ENSG00000136709	WDR33	protein_coding	Intergenic	.	.	Alu	0.3
2	130158484	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.4
2	130158485	A->G	-	ENSG00000136699	SMPD4	protein_coding	Intergenic	.	.	Alu	0.307692
2	131091885	A->G	-	ENSG00000152102	FAM168B	protein_coding	Intergenic	.	.	Alu	0.0740741
2	131109110	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.111111
2	131110475	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.142857
2	131110476	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.285714
2	131110480	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.181818
2	131110620	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.230769
2	131113287	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.3
2	131145411	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.117647
2	131145420	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.105263
2	131145471	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.157895
2	131146096	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.2
2	131146117	A->G	+	ENSG00000115762	PLEKHB2	protein_coding	Intergenic	.	.	Alu	0.363636
2	131505558	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.153846
2	131513514	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.2
2	131513929	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.384615
2	131513940	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.428571
2	131513959	A->G	+	ENSG00000152117	AC073869.1	transcribed_processed_pseudogene	Intergenic	.	.	Alu	0.416667
2	134929931	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.181818
2	134950461	A->G	+	ENSG00000082258	CCNT2	protein_coding	Intergenic	.	.	Alu	0.166667
2	135760271	A->G	+	ENSG00000144224	UBXN4	protein_coding	Intergenic	.	.	Alu	0.166667
2	143301095	A->G	+	ENSG00000228655	AC096558.1	antisense	Intergenic	.	.	Alu	0.3
2	143502815	A->G	+	ENSG00000257640	AC096558.2	antisense	Intergenic	.	.	Alu	0.2
2	151421612	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.272727
2	151421615	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.230769
2	151421645	A->G	+	ENSG00000080345	RIF1	protein_coding	Intergenic	.	.	Alu	0.166667
2	157331151	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
2	159730089	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.230769
2	159731499	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.2
2	159731564	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.111111
2	159731953	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
2	159731957	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.272727
2	159732741	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.2
2	159732806	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.294118
2	159736046	A->G	+	ENSG00000136536	7-Mar	protein_coding	Intergenic	.	.	Alu	0.166667
2	161165203	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.375
2	161166667	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.125
2	161167765	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.133333
2	161167898	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.214286
2	161167901	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.153846
2	161168575	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.2
2	161205884	A->G	+	ENSG00000136560	TANK	protein_coding	Intergenic	.	.	Alu	0.2
2	165768012	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.357143
2	165769646	A->G	-	ENSG00000115339	GALNT3	protein_coding	Intergenic	.	.	Alu	0.142857
2	171005502	A->G	-	ENSG00000198586	TLK1	protein_coding	Intergenic	.	.	Alu	0.166667
2	173921621	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.4
2	173931272	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.148936
2	173931284	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0882353
2	173931532	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0769231
2	173931579	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0909091
2	173931614	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.111111
2	173931615	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.277778
2	173931623	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.176471
2	173932330	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.133333
2	173932368	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.08
2	173932372	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.115385
2	173932463	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.103448
2	173932748	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.1875
2	173932803	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.111111
2	173932825	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.214286
2	173932910	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.1875
2	173944925	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.130435
2	173946838	A->G	-	ENSG00000172845	SP3	protein_coding	Intergenic	.	.	Alu	0.0952381
2	174575996	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.153846
2	174577709	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.0769231
2	174577741	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.190476
2	174577797	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.125
2	174577807	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.222222
2	174577842	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.133333
2	174577843	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.133333
2	174579155	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.115385
2	174579156	A->G	-	ENSG00000237798	AC010894.4	antisense	Intergenic	.	.	Alu	0.0740741
2	174629137	A->G	-	ENSG00000236449	AC010894.3	antisense	Intergenic	.	.	Alu	0.3
2	177235656	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	177243623	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.0952381
2	177243731	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.421053
2	177243777	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.111111
2	177244136	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.3
2	177246665	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.08
2	177248972	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.142857
2	177249051	A->G	-	ENSG00000116044	NFE2L2	protein_coding	Intergenic	.	.	Alu	0.333333
2	178445973	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intergenic	.	.	Alu	0.263158
2	186628544	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.208333
2	186628545	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.347826
2	186628625	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.15
2	186628822	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.5
2	186628845	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.642857
2	186628861	A->G	+	ENSG00000138448	ITGAV	protein_coding	Intergenic	.	.	Alu	0.5
2	191011516	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.5
2	191011551	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	191011557	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	191011950	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.0606061
2	191012196	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.263158
2	191012221	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.705882
2	191012329	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.08
2	191012333	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.206897
2	191012334	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.133333
2	191012353	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.129032
2	191012408	A->G	-	ENSG00000115415	STAT1	protein_coding	Intergenic	.	.	Alu	0.15
2	191073430	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	191073436	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.4
2	191073442	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.315789
2	191073443	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.210526
2	191073504	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.153846
2	191073507	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.4
2	191073541	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.272727
2	191073607	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.533333
2	191073614	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.307692
2	191073627	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.176471
2	191073646	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.111111
2	191074916	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.125
2	191074944	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.142857
2	191074978	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.111111
2	191116472	A->G	-	ENSG00000138378	STAT4	protein_coding	Intergenic	.	.	Alu	0.2
2	196141443	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.08
2	196141496	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.157895
2	196141535	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0833333
2	196141537	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.478261
2	196141547	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.35
2	196141576	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.2
2	196141643	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.333333
2	196141649	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.5
2	196141651	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.764706
2	196142150	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.592593
2	196142151	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.185185
2	196142187	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.333333
2	196142197	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.4
2	196142223	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.217391
2	196142246	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0909091
2	196142251	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.136364
2	196157041	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0392157
2	196157076	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.037037
2	196158822	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.115385
2	196159586	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0625
2	196162848	A->G	-	ENSG00000081320	STK17B	protein_coding	Intergenic	.	.	Alu	0.0666667
2	196996654	A->G	-	ENSG00000065413	ANKRD44	protein_coding	Intergenic	.	.	Alu	0.230769
2	197393927	A->G	-	ENSG00000115524	SF3B1	protein_coding	Intergenic	.	.	Alu	0.214286
2	197476951	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
2	197490624	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0444444
2	197490663	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	197491432	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	197491873	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0862069
2	197491921	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.309524
2	197491940	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0526316
2	197491946	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.5
2	197492000	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.047619
2	197492001	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.116279
2	197492075	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.235294
2	197492113	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.09375
2	197492318	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	197492327	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.647059
2	197492328	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.117647
2	197492358	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	197492389	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.129032
2	197492469	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.107143
2	197492485	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.09375
2	197492960	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intergenic	.	.	Alu	0.0625
2	197518965	A->G	+	ENSG00000270757	HSPE1-MOB4	protein_coding	Intergenic	.	.	Alu	0.181818
2	197519101	A->G	+	ENSG00000270757	HSPE1-MOB4	protein_coding	Intergenic	.	.	Alu	0.333333
2	197519148	A->G	+	ENSG00000270757	HSPE1-MOB4	protein_coding	Intergenic	.	.	Alu	0.133333
2	199937412	A->G	-	ENSG00000178074	C2orf69	protein_coding	Intergenic	.	.	Alu	0.363636
2	199965551	A->G	+	ENSG00000162972	MAIP1	protein_coding	Intergenic	.	.	Alu	0.153846
2	200819163	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	200819207	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.133333
2	200819218	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0625
2	200819719	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.08
2	200819738	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.0645161
2	200821608	A->G	+	ENSG00000082153	BZW1	protein_coding	Intergenic	.	.	Alu	0.148148
2	200852001	A->G	-	.	.	.	Intergenic	.	.	Alu	0.1
2	200852043	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
2	200852089	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
2	200852415	A->G	-	.	.	.	Intergenic	.	.	Alu	0.142857
2	200852432	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
2	200855750	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.05
2	200855825	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.16129
2	200855852	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0769231
2	200856235	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	200856254	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	200856312	A->G	-	ENSG00000013441	CLK1	protein_coding	Intergenic	.	.	Alu	0.105263
2	200890174	A->G	+	ENSG00000196290	NIF3L1	protein_coding	Intergenic	.	.	Alu	0.3
2	200890193	A->G	+	ENSG00000196290	NIF3L1	protein_coding	Intergenic	.	.	Alu	0.2
2	201127416	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.117647
2	201144952	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.133333
2	201144953	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.125
2	201144982	A->G	+	ENSG00000003402	CFLAR	protein_coding	Intergenic	.	.	Alu	0.25
2	202275722	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.4
2	202275732	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.105263
2	202275769	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.241379
2	202275843	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202276163	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.153846
2	202276178	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.272727
2	202279673	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.111111
2	202280229	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0909091
2	202281328	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.1
2	202281377	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.105263
2	202284134	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
2	202285488	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
2	202287334	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.142857
2	202287901	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.117647
2	202290006	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.125
2	202290013	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.3125
2	202290032	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.125
2	202290055	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.125
2	202290085	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.411765
2	202290136	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.111111
2	202290139	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.2
2	202293605	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.272727
2	202293613	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.2
2	202294868	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202294885	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.166667
2	202298486	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.266667
2	202298493	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.117647
2	202298502	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.157895
2	202299021	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.170213
2	202299034	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0384615
2	202299064	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.0465116
2	202299126	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.105263
2	202299140	A->G	+	ENSG00000055044	NOP58	protein_coding	Intergenic	.	.	Alu	0.111111
2	203298833	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203299665	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.105263
2	203299674	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0909091
2	203299699	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0714286
2	203299823	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.173913
2	203300628	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203300670	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.411765
2	203300703	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.388889
2	203300729	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.105263
2	203300995	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.133333
2	203300996	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203301001	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.111111
2	203301046	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1
2	203301117	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.391304
2	203301121	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.08
2	203301145	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.26087
2	203301146	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	203301148	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0869565
2	203301153	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.130435
2	203301301	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.222222
2	203301326	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.24
2	203301366	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0689655
2	203301371	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203301383	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.103448
2	203301393	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.0740741
2	203301506	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.55
2	203301518	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.307692
2	203301532	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.266667
2	203301533	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.866667
2	203302106	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203302479	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203302488	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.230769
2	203302516	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.1875
2	203302721	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.272727
2	203302965	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.352941
2	203302967	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.117647
2	203302968	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.352941
2	203304013	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.181818
2	203304034	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.214286
2	203304044	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.25
2	203304069	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.153846
2	203304073	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203304108	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203304363	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.222222
2	203304379	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.4
2	203304382	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	203304404	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.866667
2	203304745	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.15
2	203304774	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	203304856	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.6
2	203304868	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.166667
2	203304911	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.125
2	203305402	A->G	+	ENSG00000119004	CYP20A1	protein_coding	Intergenic	.	.	Alu	0.2
2	210003098	A->G	+	ENSG00000197713	RPE	protein_coding	Intergenic	.	.	Alu	0.5
2	216208098	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
2	216208101	A->G	+	.	.	.	Intergenic	.	.	Alu	0.454545
2	218227455	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218227512	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218227526	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.1
2	218227527	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.15625
2	218232006	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.166667
2	218232007	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.105263
2	218232094	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.142857
2	218232121	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.125
2	218232695	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.111111
2	218232709	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.315789
2	218232711	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.105263
2	218232783	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.222222
2	218232838	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0512821
2	218232850	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.214286
2	218232872	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0512821
2	218236780	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0810811
2	218237222	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.152174
2	218237225	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.097561
2	218237299	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0454545
2	218237300	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0434783
2	218237361	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.114286
2	218237366	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0571429
2	218237401	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.131579
2	218237421	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0416667
2	218237433	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0327869
2	218237438	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0377358
2	218237471	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0422535
2	218237666	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0740741
2	218237667	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.103448
2	218237700	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0740741
2	218237706	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.225806
2	218237747	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.05
2	218237750	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0512821
2	218237756	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0789474
2	218237802	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0434783
2	218237815	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0487805
2	218237831	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0425532
2	218237842	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0612245
2	218237858	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.0434783
2	218247581	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.166667
2	218247822	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.153846
2	218247928	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.181818
2	218248714	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.2
2	218252076	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.117647
2	218252089	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intergenic	.	.	Alu	0.285714
2	218369537	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0470588
2	218369545	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0206186
2	218369890	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
2	218371634	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
2	218371674	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
2	218385611	A->G	+	ENSG00000018280	SLC11A1	protein_coding	Intergenic	.	.	Alu	0.142857
2	218385653	A->G	+	ENSG00000018280	SLC11A1	protein_coding	Intergenic	.	.	Alu	0.108108
2	218385671	A->G	+	ENSG00000018280	SLC11A1	protein_coding	Intergenic	.	.	Alu	0.0512821
2	218407866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
2	218407878	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
2	218409648	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	218409649	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
2	218411416	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
2	218571319	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.230769
2	218571594	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.4
2	218571698	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.153846
2	218571711	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.166667
2	218575486	A->G	+	ENSG00000144580	CNOT9	protein_coding	Intergenic	.	.	Alu	0.142857
2	223898502	A->G	-	ENSG00000085449	WDFY1	protein_coding	Intergenic	.	.	Alu	0.2
2	224508899	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224517551	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224517561	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.166667
2	224517591	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.153846
2	224522670	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.25
2	224530795	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.3
2	224530825	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.5
2	224535295	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.2
2	224581247	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.363636
2	224581605	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.285714
2	224581728	A->G	-	ENSG00000036257	CUL3	protein_coding	Intergenic	.	.	Alu	0.125
2	224789654	A->G	-	ENSG00000135905	DOCK10	protein_coding	Intergenic	.	.	Alu	0.3
2	224789683	A->G	-	ENSG00000135905	DOCK10	protein_coding	Intergenic	.	.	Alu	0.153846
2	224826124	A->G	-	ENSG00000135905	DOCK10	protein_coding	Intergenic	.	.	Alu	0.153846
2	224940895	A->G	-	ENSG00000135905	DOCK10	protein_coding	Intergenic	.	.	Alu	0.454545
2	229261136	A->G	-	ENSG00000153823	PID1	protein_coding	Intergenic	.	.	Alu	0.12
2	229261141	A->G	-	ENSG00000153823	PID1	protein_coding	Intergenic	.	.	Alu	0.24
2	229833513	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.111111
2	229833516	A->G	-	ENSG00000153827	TRIP12	protein_coding	Intergenic	.	.	Alu	0.352941
2	230165924	A->G	-	ENSG00000225963	AC009950.1	antisense	Intergenic	.	.	Alu	0.153846
2	230512895	A->G	+	ENSG00000067066	SP100	protein_coding	Intergenic	.	.	Alu	0.4
2	230517507	A->G	+	ENSG00000067066	SP100	protein_coding	Intergenic	.	.	Alu	0.153846
2	230517556	A->G	+	ENSG00000067066	SP100	protein_coding	Intergenic	.	.	Alu	0.2
2	230517618	A->G	+	ENSG00000067066	SP100	protein_coding	Intergenic	.	.	Alu	0.4
2	233071092	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.333333
2	233071168	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.272727
2	233085318	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.142857
2	233128577	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233128578	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.3
2	233130001	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.3
2	233130002	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233130003	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233154383	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.2
2	233205888	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.25
2	233205917	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.142857
2	233205958	A->G	+	ENSG00000168918	INPP5D	protein_coding	Intergenic	.	.	Alu	0.176471
2	233362003	A->G	+	ENSG00000077044	DGKD	protein_coding	Intergenic	.	.	Alu	0.181818
2	234446037	A->G	-	ENSG00000231682	LINC01891	lincRNA	Intergenic	.	.	Alu	0.111111
2	234452924	A->G	-	ENSG00000231682	LINC01891	lincRNA	Intergenic	.	.	Alu	0.142857
2	234452931	A->G	-	ENSG00000231682	LINC01891	lincRNA	Intergenic	.	.	Alu	0.133333
2	234453797	A->G	-	ENSG00000231682	LINC01891	lincRNA	Intergenic	.	.	Alu	0.0645161
2	234453879	A->G	-	ENSG00000231682	LINC01891	lincRNA	Intergenic	.	.	Alu	0.142857
2	237710033	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.166667
2	237710034	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.131579
2	237710401	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.105263
2	237710967	A->G	+	ENSG00000124831	LRRFIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
2	238036204	A->G	+	ENSG00000184182	UBE2F	protein_coding	Intergenic	.	.	Alu	0.142857
2	238036223	A->G	+	ENSG00000184182	UBE2F	protein_coding	Intergenic	.	.	Alu	0.2
2	238037829	A->G	+	ENSG00000184182	UBE2F	protein_coding	Intergenic	.	.	Alu	0.3
2	238039080	A->G	+	ENSG00000184182	UBE2F	protein_coding	Intergenic	.	.	Alu	0.2
2	238191245	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.166667
2	238192510	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.25
2	238196382	A->G	-	ENSG00000132323	ILKAP	protein_coding	Intergenic	.	.	Alu	0.2
2	238275532	A->G	-	ENSG00000132326	PER2	protein_coding	Intergenic	.	.	Alu	0.2
2	241056351	A->G	+	ENSG00000162804	SNED1	protein_coding	Intergenic	.	.	Alu	0.3
2	241320618	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.272727
2	241329396	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.454545
2	241331032	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.3
2	241331643	A->G	+	ENSG00000168385	2-Sep	protein_coding	Intergenic	.	.	Alu	0.3
2	242101630	A->G	+	ENSG00000220804	LINC01881	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
3	100286578	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.117647
3	100287033	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.173913
3	100287035	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0833333
3	100287136	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0714286
3	100287161	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.32
3	100287213	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.15
3	100287238	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.176471
3	100287808	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.133333
3	100287809	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.2
3	100287853	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.12
3	100287854	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.16
3	100287871	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.0833333
3	100288043	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.1
3	100288060	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.105263
3	100291865	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.3
3	100291866	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.3
3	100292039	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.3
3	100309123	A->G	+	ENSG00000036054	TBC1D23	protein_coding	Intergenic	.	.	Alu	0.181818
3	101581797	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.181818
3	101583701	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.181818
3	101584916	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.363636
3	101584919	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.272727
3	101584946	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.181818
3	101587113	A->G	+	ENSG00000081154	PCNP	protein_coding	Intergenic	.	.	Alu	0.25
3	101668379	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.166667
3	101668388	A->G	-	ENSG00000066422	ZBTB11	protein_coding	Intergenic	.	.	Alu	0.333333
3	108860889	A->G	+	.	.	.	Intergenic	.	.	Alu	0.727273
3	108860901	A->G	+	.	.	.	Intergenic	.	.	Alu	0.263158
3	113730218	A->G	-	ENSG00000121579	NAA50	protein_coding	Intergenic	.	.	Alu	0.3
3	119308920	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.230769
3	119309695	A->G	+	ENSG00000031081	ARHGAP31	protein_coding	Intergenic	.	.	Alu	0.2
3	119318164	A->G	+	ENSG00000241155	ARHGAP31-AS1	antisense	Intergenic	.	.	Alu	0.2
3	119318252	A->G	+	ENSG00000241155	ARHGAP31-AS1	antisense	Intergenic	.	.	Alu	0.2
3	121637718	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.307692
3	121637732	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.166667
3	121638153	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.5
3	121650893	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.2
3	121650895	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.272727
3	121651603	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.125
3	121651638	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.142857
3	121651679	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.454545
3	121651692	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.142857
3	121652559	A->G	-	ENSG00000180353	HCLS1	protein_coding	Intergenic	.	.	Alu	0.2
3	121689866	A->G	-	ENSG00000173230	GOLGB1	protein_coding	Intergenic	.	.	Alu	0.454545
3	121689876	A->G	-	ENSG00000173230	GOLGB1	protein_coding	Intergenic	.	.	Alu	0.666667
3	121689888	A->G	-	ENSG00000173230	GOLGB1	protein_coding	Intergenic	.	.	Alu	0.153846
3	121833189	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.5
3	121833226	A->G	-	ENSG00000173226	IQCB1	protein_coding	Intergenic	.	.	Alu	0.333333
3	122570880	A->G	+	ENSG00000163840	DTX3L	protein_coding	Intergenic	.	.	Alu	0.583333
3	122612289	A->G	+	ENSG00000173200	PARP15	protein_coding	Intergenic	.	.	Alu	0.153846
3	122863989	A->G	+	ENSG00000138463	DIRC2	protein_coding	Intergenic	.	.	Alu	0.5
3	128057780	A->G	+	ENSG00000058262	SEC61A1	protein_coding	Intergenic	.	.	Alu	0.166667
3	128732683	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.125
3	128741872	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	128741915	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.142857
3	128741921	A->G	+	ENSG00000075785	RAB7A	protein_coding	Intergenic	.	.	Alu	0.2
3	129174409	A->G	-	ENSG00000169714	CNBP	protein_coding	Intergenic	.	.	Alu	0.105263
3	129174443	A->G	-	ENSG00000169714	CNBP	protein_coding	Intergenic	.	.	Alu	0.0909091
3	129178002	A->G	-	ENSG00000169714	CNBP	protein_coding	Intergenic	.	.	Alu	0.105263
3	132368912	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
3	132368929	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
3	132370552	A->G	+	.	.	.	Intergenic	.	.	Alu	0.384615
3	132370574	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
3	132370575	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
3	141589826	A->G	+	ENSG00000155903	RASA2	protein_coding	Intergenic	.	.	Alu	0.181818
3	141743148	A->G	+	ENSG00000114125	RNF7	protein_coding	Intergenic	.	.	Alu	0.25
3	141882860	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.133333
3	141883285	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.1
3	141883288	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.1
3	141883289	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.0689655
3	141883328	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.0909091
3	141883433	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.190476
3	141888702	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.192308
3	141890825	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.133333
3	141907388	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.266667
3	141907507	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.1
3	141910155	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.0769231
3	141911548	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.173913
3	141911675	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.0810811
3	141917567	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.125
3	141917601	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.0689655
3	141917622	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.0571429
3	141917639	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.105263
3	141917644	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.0540541
3	141917651	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.138889
3	141918668	A->G	+	ENSG00000244124	ATP1B3-AS1	antisense	Intergenic	.	.	Alu	0.0909091
3	141919307	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.15
3	141919684	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.111111
3	141919710	A->G	+	ENSG00000069849	ATP1B3	protein_coding	Intergenic	.	.	Alu	0.105263
3	142313883	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.4
3	142315647	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.3
3	142316808	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.2
3	142322312	A->G	-	ENSG00000114127	XRN1	protein_coding	Intergenic	.	.	Alu	0.818182
3	143017833	A->G	+	ENSG00000163714	U2SURP	protein_coding	Intergenic	.	.	Alu	0.181818
3	146519255	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.295082
3	146542252	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.157895
3	146542259	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.0909091
3	146542270	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.151515
3	146543176	A->G	-	ENSG00000188313	PLSCR1	protein_coding	Intergenic	.	.	Alu	0.0857143
3	150433860	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.291667
3	150433922	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.130435
3	150433928	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.12
3	150433954	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.1
3	150434210	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.416667
3	150434282	A->G	+	ENSG00000196428	TSC22D2	protein_coding	Intergenic	.	.	Alu	0.133333
3	150617343	A->G	+	ENSG00000198843	SELENOT	protein_coding	Intergenic	.	.	Alu	0.7
3	150751758	A->G	-	ENSG00000181788	SIAH2	protein_coding	Intergenic	.	.	Alu	0.153846
3	152291902	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.2
3	152330215	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.15
3	152330240	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.125
3	152418411	A->G	+	ENSG00000152601	MBNL1	protein_coding	Intergenic	.	.	Alu	0.3
3	154295964	A->G	-	ENSG00000174953	DHX36	protein_coding	Intergenic	.	.	Alu	0.2
3	158815034	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.133333
3	158815037	A->G	+	ENSG00000118855	MFSD1	protein_coding	Intergenic	.	.	Alu	0.666667
3	160503109	A->G	-	ENSG00000186432	KPNA4	protein_coding	Intergenic	.	.	Alu	0.176471
3	169972662	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.117647
3	169972663	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.176471
3	169986771	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.4
3	169986791	A->G	+	ENSG00000008952	SEC62	protein_coding	Intergenic	.	.	Alu	0.307692
3	170168086	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.153846
3	170168094	A->G	-	ENSG00000173889	PHC3	protein_coding	Intergenic	.	.	Alu	0.153846
3	170362254	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.2
3	170362388	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.1
3	170362396	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.1
3	170362744	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.0625
3	170363690	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.157895
3	170364221	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.0357143
3	170366559	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.157895
3	170366560	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.0952381
3	170366565	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.0869565
3	170366598	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.0967742
3	170367317	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.147059
3	170369423	A->G	+	ENSG00000136603	SKIL	protein_coding	Intergenic	.	.	Alu	0.210526
3	183549824	A->G	-	ENSG00000242522	KLHL6-AS1	antisense	Intergenic	.	.	Alu	0.142857
3	183640788	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.3
3	183640852	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.2
3	183669988	A->G	+	ENSG00000114796	KLHL24	protein_coding	Intergenic	.	.	Alu	0.142857
3	184319019	A->G	+	ENSG00000114867	EIF4G1	protein_coding	Intergenic	.	.	Alu	0.214286
3	184319020	A->G	+	ENSG00000114867	EIF4G1	protein_coding	Intergenic	.	.	Alu	0.153846
3	185591112	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.5625
3	185596957	A->G	+	ENSG00000163904	SENP2	protein_coding	Intergenic	.	.	Alu	0.272727
3	193629043	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.230769
3	193629055	A->G	+	ENSG00000198836	OPA1	protein_coding	Intergenic	.	.	Alu	0.153846
3	194406292	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.025974
3	194406295	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0238095
3	194406335	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.025641
3	194406344	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.028169
3	194408293	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.340426
3	194408294	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.104167
3	194408316	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.574468
3	194464834	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.08
3	194482343	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.103448
3	194482344	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.0714286
3	194482755	A->G	-	ENSG00000133657	ATP13A3	protein_coding	Intergenic	.	.	Alu	0.075
3	194578544	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
3	194578866	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0384615
3	194578878	A->G	+	.	.	.	Intergenic	.	.	Alu	0.046875
3	195520174	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.142857
3	195520488	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195520490	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.230769
3	195520500	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.4
3	195520535	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.375
3	195520536	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.3125
3	195520782	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.153846
3	195520792	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.428571
3	195520887	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.2
3	195521203	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.454545
3	195527247	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.117647
3	195527293	A->G	-	ENSG00000184203	PPP1R2	protein_coding	Intergenic	.	.	Alu	0.133333
3	195666989	A->G	+	ENSG00000215837	SDHAP2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.0625
3	195667418	A->G	+	ENSG00000215837	SDHAP2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.210526
3	195672876	A->G	+	ENSG00000215837	SDHAP2	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.538462
3	195898838	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.214286
3	195898850	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.3125
3	195898851	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.266667
3	195898852	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.2
3	195903312	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.583333
3	195903313	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	195904136	A->G	-	ENSG00000061938	TNK2	protein_coding	Intergenic	.	.	Alu	0.3
3	195979460	A->G	-	ENSG00000185485	SDHAP1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
3	196052854	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.125
3	196052856	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.111111
3	196052925	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.176471
3	196069075	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.214286
3	196070503	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.166667
3	196070504	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.5
3	196070695	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.314286
3	196070931	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.0967742
3	196079531	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.153846
3	196079532	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.153846
3	196079577	A->G	-	ENSG00000072274	TFRC	protein_coding	Intergenic	.	.	Alu	0.192308
3	196241385	A->G	-	ENSG00000163959	SLC51A	protein_coding	Intergenic	.	.	Alu	0.333333
3	196241465	A->G	-	ENSG00000163959	SLC51A	protein_coding	Intergenic	.	.	Alu	0.769231
3	196477865	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.1875
3	196477913	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.181818
3	196477989	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.166667
3	196485424	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.12
3	196485475	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.15
3	196486533	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.105263
3	196486534	A->G	-	ENSG00000163961	RNF168	protein_coding	Intergenic	.	.	Alu	0.105263
3	196658757	A->G	+	ENSG00000174004	NRROS	protein_coding	Intergenic	.	.	Alu	0.181818
3	196714305	A->G	+	ENSG00000163964	PIGX	protein_coding	Intergenic	.	.	Alu	0.166667
3	196742262	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.2
3	196742268	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	196742802	A->G	+	ENSG00000180370	PAK2	protein_coding	Intergenic	.	.	Alu	0.181818
3	196905965	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.454545
3	196905970	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.545455
3	196906064	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.285714
3	196906105	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.181818
3	196906126	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.2
3	196906141	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.125
3	196911699	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.181818
3	196916901	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.125
3	196916933	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.117647
3	196916955	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.266667
3	196916956	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.133333
3	196916987	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.619048
3	196917013	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0909091
3	196917014	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0869565
3	196917037	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.5
3	196917043	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.117647
3	196917066	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0952381
3	196917069	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.0833333
3	196917083	A->G	+	ENSG00000119231	SENP5	protein_coding	Intergenic	.	.	Alu	0.192308
3	197752085	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.2
3	197752110	A->G	+	ENSG00000122068	FYTTD1	protein_coding	Intergenic	.	.	Alu	0.181818
3	197835017	A->G	+	ENSG00000186001	LRCH3	protein_coding	Intergenic	.	.	Alu	0.2
4	102511403	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.133333
4	102511425	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0588235
4	102511493	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0869565
4	102512453	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.172414
4	102512461	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.0740741
4	102570342	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.153846
4	102572638	A->G	+	ENSG00000109320	NFKB1	protein_coding	Intergenic	.	.	Alu	0.15
4	105152072	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.142857
4	105152806	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.454545
4	105159529	A->G	+	ENSG00000168769	TET2	protein_coding	Intergenic	.	.	Alu	0.111111
4	105420041	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.181818
4	105421826	A->G	-	ENSG00000138777	PPA2	protein_coding	Intergenic	.	.	Alu	0.142857
4	108623510	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.153846
4	108623537	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.266667
4	108623539	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.3125
4	108623567	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.16
4	108623616	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.227273
4	108623645	A->G	+	ENSG00000109475	RPL34	protein_coding	Intergenic	.	.	Alu	0.176471
4	109565950	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.166667
4	109567593	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.416667
4	109567625	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.153846
4	109686773	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.25
4	109686802	A->G	+	ENSG00000005059	MCUB	protein_coding	Intergenic	.	.	Alu	0.181818
4	118701352	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.214286
4	118701433	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.214286
4	118701447	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.142857
4	118701454	A->G	+	ENSG00000145388	METTL14	protein_coding	Intergenic	.	.	Alu	0.333333
4	119502186	A->G	+	ENSG00000245958	AC093752.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.25
4	119502214	A->G	+	ENSG00000245958	AC093752.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.384615
4	119502216	A->G	+	ENSG00000245958	AC093752.1	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.5
4	128012078	A->G	+	ENSG00000164074	ABHD18	protein_coding	Intergenic	.	.	Alu	0.2
4	128276408	A->G	-	ENSG00000164040	PGRMC2	protein_coding	Intergenic	.	.	Alu	0.3
4	128276414	A->G	-	ENSG00000164040	PGRMC2	protein_coding	Intergenic	.	.	Alu	0.2
4	139020811	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.117647
4	139024661	A->G	+	ENSG00000151014	NOCT	protein_coding	Intergenic	.	.	Alu	0.181818
4	139046042	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.030303
4	139046593	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.190476
4	139046625	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0869565
4	139046650	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0909091
4	139046776	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.166667
4	139047440	A->G	+	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.0606061
4	139079037	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.142857
4	139079129	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.214286
4	139079690	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.117647
4	139079746	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.153846
4	139079800	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.2
4	139079803	A->G	-	ENSG00000109381	ELF2	protein_coding	Intergenic	.	.	Alu	0.133333
4	143541957	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.1875
4	143541962	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.235294
4	143542889	A->G	+	ENSG00000153147	SMARCA5	protein_coding	Intergenic	.	.	Alu	0.0588235
4	147662687	A->G	-	ENSG00000164168	TMEM184C	protein_coding	Intergenic	.	.	Alu	0.153846
4	151105433	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.133333
4	151105468	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151105904	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.3
4	151105930	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.272727
4	151105955	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.181818
4	151105957	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.166667
4	151110350	A->G	+	ENSG00000109686	SH3D19	protein_coding	Intergenic	.	.	Alu	0.230769
4	153699917	A->G	+	ENSG00000137462	TLR2	protein_coding	Intergenic	.	.	Alu	0.136364
4	153699924	A->G	+	ENSG00000137462	TLR2	protein_coding	Intergenic	.	.	Alu	0.391304
4	168384363	A->G	-	ENSG00000181381	DDX60L	protein_coding	Intergenic	.	.	Alu	0.0555556
4	168384365	A->G	-	ENSG00000181381	DDX60L	protein_coding	Intergenic	.	.	Alu	0.142857
4	168384425	A->G	-	ENSG00000181381	DDX60L	protein_coding	Intergenic	.	.	Alu	0.0638298
4	176325774	A->G	+	ENSG00000129128	SPCS3	protein_coding	Intergenic	.	.	Alu	0.4375
4	176325843	A->G	+	ENSG00000129128	SPCS3	protein_coding	Intergenic	.	.	Alu	0.166667
4	176325844	A->G	+	ENSG00000129128	SPCS3	protein_coding	Intergenic	.	.	Alu	0.5
4	184630763	A->G	-	ENSG00000164305	CASP3	protein_coding	Intergenic	.	.	Alu	0.125
4	184804456	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.08
4	184822487	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.193548
4	184822571	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.216216
4	184822582	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.06
4	184822595	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0666667
4	184822615	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0322581
4	184822639	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0444444
4	184822644	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0416667
4	184822657	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.25
4	184822733	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.195652
4	184822821	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.108108
4	184822847	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.075
4	184822867	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.181818
4	184822868	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.09375
4	184822894	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.09375
4	184822908	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.21875
4	184824208	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0833333
4	184824222	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0363636
4	184824286	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.131579
4	184824290	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0487805
4	184824369	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0666667
4	184824394	A->G	-	ENSG00000151726	ACSL1	protein_coding	Intergenic	.	.	Alu	0.0526316
5	100854339	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.166667
5	100854523	A->G	-	ENSG00000113532	ST8SIA4	protein_coding	Intergenic	.	.	Alu	0.166667
5	111509757	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.103448
5	111509786	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.277778
5	111509801	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.222222
5	111509825	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.125
5	111509829	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.208333
5	111511463	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.23913
5	111511492	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.102041
5	111511515	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.113636
5	111511528	A->G	-	ENSG00000164211	STARD4	protein_coding	Intergenic	.	.	Alu	0.075
5	112865357	A->G	+	ENSG00000153037	SRP19	protein_coding	Intergenic	.	.	Alu	0.6875
5	122804466	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.181818
5	122804511	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.272727
5	122804571	A->G	+	ENSG00000205302	SNX2	protein_coding	Intergenic	.	.	Alu	0.636364
5	131160142	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.181818
5	131161532	A->G	-	ENSG00000169567	HINT1	protein_coding	Intergenic	.	.	Alu	0.125
5	131352998	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.2
5	131353715	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.3
5	131353762	A->G	+	ENSG00000158985	CDC42SE2	protein_coding	Intergenic	.	.	Alu	0.181818
5	132473613	A->G	-	ENSG00000197536	C5orf56	processed_transcript	Intergenic	.	.	Alu	0.454545
5	132881921	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.133333
5	132881938	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132913669	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132913714	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.3
5	132913984	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.153846
5	132914010	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.230769
5	132914065	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132914080	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.125
5	132914106	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132918514	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.272727
5	132961273	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.272727
5	132961278	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.454545
5	132961381	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.214286
5	132961410	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.181818
5	132961420	A->G	-	ENSG00000072364	AFF4	protein_coding	Intergenic	.	.	Alu	0.111111
5	133978374	A->G	-	ENSG00000213585	VDAC1	protein_coding	Intergenic	.	.	Alu	0.153846
5	133984158	A->G	-	ENSG00000213585	VDAC1	protein_coding	Intergenic	.	.	Alu	0.25
5	134118931	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.1875
5	134121453	A->G	+	ENSG00000081059	TCF7	protein_coding	Intergenic	.	.	Alu	0.181818
5	134162155	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.111111
5	134162199	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.136364
5	134162239	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.103448
5	134162268	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.125
5	134162269	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.12
5	134162271	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	134162274	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.166667
5	134162308	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.263158
5	134162364	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	134162371	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.125
5	134162958	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.08
5	134162964	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.483871
5	134162971	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0769231
5	134162998	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	134163027	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.133333
5	134163624	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.266667
5	134163668	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	134163678	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.25
5	134163708	A->G	-	ENSG00000113558	SKP1	protein_coding	Intergenic	.	.	Alu	0.294118
5	134207322	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.2
5	134215173	A->G	-	ENSG00000272772	AC104109.3	protein_coding	Intergenic	.	.	Alu	0.3
5	134378054	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.238095
5	134378062	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.105263
5	134378334	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.454545
5	134378339	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.4
5	134378389	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134378405	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134379964	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.173913
5	134379990	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0740741
5	134379995	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.08
5	134381084	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.181818
5	134381096	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.272727
5	134381280	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0833333
5	134381480	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.047619
5	134381500	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.285714
5	134381734	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.15
5	134381758	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0909091
5	134381797	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.125
5	134381864	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.121212
5	134382044	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.25
5	134382195	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134382197	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.111111
5	134382573	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.130435
5	134382575	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0833333
5	134382637	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0909091
5	134382912	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.222222
5	134382956	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.3
5	134383360	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.176471
5	134383427	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.363636
5	134388023	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.0869565
5	134388038	A->G	+	ENSG00000119048	UBE2B	protein_coding	Intergenic	.	.	Alu	0.206897
5	134393406	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
5	134393449	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
5	134393526	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
5	134393527	A->G	+	.	.	.	Intergenic	.	.	Alu	0.266667
5	134393528	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	134393531	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
5	134396642	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
5	134397084	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
5	134397085	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
5	134398431	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
5	134742999	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.181818
5	134743012	A->G	+	ENSG00000164615	CAMLG	protein_coding	Intergenic	.	.	Alu	0.25
5	134772402	A->G	+	ENSG00000145833	DDX46	protein_coding	Intergenic	.	.	Alu	0.2
5	134962023	A->G	+	ENSG00000132570	PCBD2	protein_coding	Intergenic	.	.	Alu	0.3
5	138503231	A->G	-	.	.	.	Intergenic	.	.	Alu	0.454545
5	138513485	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.15
5	138514342	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0666667
5	138514351	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.12
5	138514480	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	138514681	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.181818
5	138517972	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.434783
5	138517985	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.357143
5	138518126	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.363636
5	138518393	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.153846
5	138518440	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.166667
5	138518459	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.133333
5	138518468	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.176471
5	138524429	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.142857
5	138526865	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.181818
5	138533610	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.12
5	138533623	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.111111
5	138533639	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.111111
5	138535178	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.142857
5	138535179	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.08
5	138535196	A->G	-	ENSG00000120705	ETF1	protein_coding	Intergenic	.	.	Alu	0.363636
5	138570144	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.928571
5	138570146	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.133333
5	138570230	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.133333
5	138570282	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.125
5	138573034	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.133333
5	138573208	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.142857
5	138573211	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.09375
5	138573222	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0666667
5	138573317	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.105263
5	138573394	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.0833333
5	138573404	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.185185
5	138573417	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.2
5	138573478	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.125
5	138573513	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.166667
5	138573564	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.3
5	138573565	A->G	-	ENSG00000113013	HSPA9	protein_coding	Intergenic	.	.	Alu	0.3
5	139278171	A->G	+	ENSG00000281398	SNHG4	lincRNA	Intergenic	.	.	Alu	0.166667
5	139295927	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.142857
5	139302128	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.266667
5	139302129	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.142857
5	139302201	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3125
5	139302202	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3125
5	139321388	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.272727
5	139321551	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.25
5	139321554	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.454545
5	139321627	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.3
5	139323678	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.142857
5	139323773	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.1875
5	139323836	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.166667
5	139323840	A->G	+	ENSG00000280987	MATR3	protein_coding	Intergenic	.	.	Alu	0.125
5	139334603	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
5	139334665	A->G	+	.	.	.	Intergenic	.	.	Alu	0.4
5	139334676	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
5	139564205	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.181818
5	139566158	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.2
5	139566293	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.25
5	139566631	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.117647
5	139570160	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.153846
5	139570210	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.272727
5	139575832	A->G	+	ENSG00000131508	UBE2D2	protein_coding	Intergenic	.	.	Alu	0.142857
5	140339435	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.111111
5	140339456	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.157895
5	140339593	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.3
5	140339621	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.384615
5	140339626	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.285714
5	140339667	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.125
5	140339673	A->G	-	ENSG00000113070	HBEGF	protein_coding	Intergenic	.	.	Alu	0.388889
5	140407456	A->G	+	ENSG00000131503	ANKHD1	protein_coding	Intergenic	.	.	Alu	0.2
5	140689578	A->G	-	ENSG00000170445	HARS	protein_coding	Intergenic	.	.	Alu	0.333333
5	141526772	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.166667
5	141529866	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.333333
5	141529867	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.25
5	141529879	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.2
5	141532396	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.214286
5	141532402	A->G	-	ENSG00000131504	DIAPH1	protein_coding	Intergenic	.	.	Alu	0.142857
5	142137273	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.3
5	142137290	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.307692
5	142137445	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.125
5	142137451	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.333333
5	142141875	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.2
5	142141876	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.454545
5	142141881	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.0833333
5	142141932	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.1
5	142141948	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.0909091
5	142141990	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.0967742
5	142141991	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.142857
5	142141995	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.148148
5	142142016	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.321429
5	142142062	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intergenic	.	.	Alu	0.375
5	143283761	A->G	-	ENSG00000113580	NR3C1	protein_coding	Intergenic	.	.	Alu	0.428571
5	146485812	A->G	+	ENSG00000113649	TCERG1	protein_coding	Intergenic	.	.	Alu	0.2
5	149540886	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149540898	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.2
5	149546391	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.133333
5	149547928	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0425532
5	149547944	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.166667
5	149547967	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.1
5	149547985	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.3
5	149548008	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.148148
5	149548009	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.115385
5	149548064	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.166667
5	149548138	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.142857
5	149548322	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.139535
5	149548323	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0930233
5	149548332	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.05
5	149548401	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.255319
5	149548410	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0363636
5	149548419	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0363636
5	149548467	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0377358
5	149548484	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0638298
5	149548491	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.210526
5	149548617	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.117647
5	149548727	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.434783
5	149548737	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	149548749	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.15
5	149548762	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.15
5	149548766	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.173913
5	149548786	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0740741
5	149548792	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.148148
5	149548802	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.105263
5	149548851	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	149548854	A->G	-	ENSG00000113712	CSNK1A1	protein_coding	Intergenic	.	.	Alu	0.08
5	150047162	A->G	+	ENSG00000113716	HMGXB3	protein_coding	Intergenic	.	.	Alu	0.5
5	150398105	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.4
5	150398121	A->G	-	ENSG00000070814	TCOF1	protein_coding	Intergenic	.	.	Alu	0.272727
5	150756238	A->G	-	ENSG00000132912	DCTN4	protein_coding	Intergenic	.	.	Alu	0.142857
5	151043590	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.25
5	151043663	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.125
5	151044111	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	151057551	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.181818
5	151073005	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	0.125
5	151077116	A->G	-	ENSG00000145901	TNIP1	protein_coding	Intergenic	.	.	Alu	1
5	151204059	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.6
5	151204060	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.533333
5	151204261	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.416667
5	151204274	A->G	-	ENSG00000198624	CCDC69	protein_coding	Intergenic	.	.	Alu	0.153846
5	151271790	A->G	+	.	.	.	Intergenic	.	.	Alu	0.190476
5	151271873	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
5	157080718	A->G	-	.	.	.	Intergenic	.	.	Alu	0.333333
5	157080730	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
5	157080744	A->G	-	.	.	.	Intergenic	.	.	Alu	0.545455
5	157082726	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0666667
5	157087647	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.166667
5	157087840	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.105263
5	157088185	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.35
5	157088191	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	157090237	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.5
5	157090479	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.133333
5	157090649	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.642857
5	157090655	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.105263
5	157090658	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.1
5	157090671	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.0952381
5	157092683	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.181818
5	157093690	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.111111
5	157093833	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.181818
5	157097519	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.157895
5	157097705	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.181818
5	157097724	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.545455
5	157097796	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.272727
5	157097798	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.25
5	157097806	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.285714
5	157098324	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.3
5	157098325	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.3
5	157098368	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.181818
5	157101886	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.111111
5	157101890	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.125
5	157102048	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.08
5	157102074	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.15
5	157102077	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.142857
5	157102114	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.133333
5	157102141	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.181818
5	157102690	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.133333
5	157102691	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.133333
5	157102724	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.285714
5	157102755	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.142857
5	157102769	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.2
5	157102778	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.125
5	157102823	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.117647
5	157103120	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.181818
5	157103249	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.0740741
5	157103340	A->G	-	ENSG00000135077	HAVCR2	protein_coding	Intergenic	.	.	Alu	0.166667
5	157219360	A->G	+	ENSG00000253980	AC010609.1	antisense	Intergenic	.	.	Alu	0.166667
5	159187484	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.142857
5	159187492	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.142857
5	159190180	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.333333
5	159190190	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.461538
5	159190237	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.153846
5	159190260	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.642857
5	159190266	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.153846
5	159190468	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.181818
5	159190579	A->G	-	ENSG00000145860	RNF145	protein_coding	Intergenic	.	.	Alu	0.642857
5	168495915	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.4
5	168495929	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.153846
5	168495932	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.230769
5	168495939	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.714286
5	168496126	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.3
5	168496736	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.454545
5	168496746	A->G	+	ENSG00000113643	RARS	protein_coding	Intergenic	.	.	Alu	0.272727
5	169708428	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.333333
5	169708665	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.4
5	169708694	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.4
5	169709486	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intergenic	.	.	Alu	0.181818
5	170264606	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.0540541
5	170264675	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.170732
5	170264677	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.153846
5	170264712	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.153846
5	170264777	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.2
5	170264785	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.428571
5	170265148	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.0666667
5	170265151	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.214286
5	170265152	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.137931
5	170281464	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.416667
5	170281552	A->G	-	ENSG00000043462	LCP2	protein_coding	Intergenic	.	.	Alu	0.181818
5	171395121	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.0869565
5	171395393	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.222222
5	171395439	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.166667
5	171398513	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.235294
5	171398637	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.538462
5	171398650	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.5
5	171398992	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.5
5	171409894	A->G	+	ENSG00000181163	NPM1	protein_coding	Intergenic	.	.	Alu	0.1
5	172051030	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.230769
5	172051037	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.142857
5	172051050	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.285714
5	172108381	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	172116110	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.25
5	172116111	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.333333
5	172149027	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	172149042	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.166667
5	172153030	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.125
5	172183085	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.333333
5	172186179	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.166667
5	172186191	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.181818
5	172186192	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.181818
5	172186262	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.2
5	172186506	A->G	-	ENSG00000072786	STK10	protein_coding	Intergenic	.	.	Alu	0.142857
5	172838666	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	172838700	A->G	+	ENSG00000113719	ERGIC1	protein_coding	Intergenic	.	.	Alu	0.133333
5	172986572	A->G	+	ENSG00000113732	ATP6V0E1	protein_coding	Intergenic	.	.	Alu	0.166667
5	173894056	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.2
5	173894057	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.2
5	173894419	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.153846
5	173894420	A->G	+	ENSG00000113742	CPEB4	protein_coding	Intergenic	.	.	Alu	0.153846
5	176489638	A->G	+	ENSG00000113194	FAF2	protein_coding	Intergenic	.	.	Alu	0.2
5	177612721	A->G	+	ENSG00000247679	AC139795.2	antisense	Intergenic	.	.	Alu	0.3
5	177612741	A->G	+	ENSG00000247679	AC139795.2	antisense	Intergenic	.	.	Alu	0.272727
5	178117504	A->G	+	ENSG00000145911	N4BP3	protein_coding	Intergenic	.	.	Alu	0.0833333
5	178117514	A->G	+	ENSG00000145911	N4BP3	protein_coding	Intergenic	.	.	Alu	0.535714
5	178117521	A->G	+	ENSG00000145911	N4BP3	protein_coding	Intergenic	.	.	Alu	0.0740741
5	178616539	A->G	-	ENSG00000113240	CLK4	protein_coding	Intergenic	.	.	Alu	0.153846
5	179826762	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0689655
5	179827546	A->G	+	ENSG00000161011	SQSTM1	protein_coding	Intergenic	.	.	Alu	0.0952381
5	180007235	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.166667
5	180007253	A->G	-	ENSG00000113269	RNF130	protein_coding	Intergenic	.	.	Alu	0.2
6	108072404	A->G	-	ENSG00000081087	OSTM1	protein_coding	Intergenic	.	.	Alu	0.133333
6	108072413	A->G	-	ENSG00000081087	OSTM1	protein_coding	Intergenic	.	.	Alu	0.111111
6	108072416	A->G	-	ENSG00000081087	OSTM1	protein_coding	Intergenic	.	.	Alu	0.15
6	108072442	A->G	-	ENSG00000081087	OSTM1	protein_coding	Intergenic	.	.	Alu	0.166667
6	109363029	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
6	109363101	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
6	110884452	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.153846
6	110884453	A->G	+	ENSG00000123505	AMD1	protein_coding	Intergenic	.	.	Alu	0.153846
6	110896704	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
6	110896723	A->G	+	.	.	.	Intergenic	.	.	Alu	0.111111
6	110896740	A->G	+	.	.	.	Intergenic	.	.	Alu	0.304348
6	110896777	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
6	110896875	A->G	+	.	.	.	Intergenic	.	.	Alu	0.210526
6	110896884	A->G	+	.	.	.	Intergenic	.	.	Alu	0.117647
6	110896958	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
6	110897030	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
6	110897039	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
6	110897045	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
6	110897086	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0952381
6	110897561	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	110897719	A->G	+	.	.	.	Intergenic	.	.	Alu	0.1875
6	111666615	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.153846
6	111698159	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.111111
6	111698412	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.5
6	111698414	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.25
6	111698840	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.4375
6	111698841	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.294118
6	111699063	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.333333
6	111867242	A->G	-	ENSG00000010810	FYN	protein_coding	Intergenic	.	.	Alu	0.176471
6	116646789	A->G	-	ENSG00000153975	ZUP1	protein_coding	Intergenic	.	.	Alu	0.3
6	122441081	A->G	-	.	.	.	Intergenic	.	.	Alu	0.105263
6	132688924	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.2
6	132689089	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.181818
6	132689113	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.153846
6	132689128	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.25
6	132691780	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.2
6	132691990	A->G	-	ENSG00000112299	VNN1	protein_coding	Intergenic	.	.	Alu	0.181818
6	136256512	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
6	136786308	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.111111
6	136786874	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.545455
6	136786898	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.117647
6	136786904	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.105263
6	136786917	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.166667
6	136787134	A->G	+	ENSG00000197442	MAP3K5	protein_coding	Intergenic	.	.	Alu	0.0952381
6	137212528	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.153846
6	137216821	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.125
6	137216839	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.115385
6	137217967	A->G	-	ENSG00000027697	IFNGR1	protein_coding	Intergenic	.	.	Alu	0.0967742
6	139147504	A->G	+	ENSG00000112406	HECA	protein_coding	Intergenic	.	.	Alu	0.2
6	142936013	A->G	-	ENSG00000010818	HIVEP2	protein_coding	Intergenic	.	.	Alu	0.307692
6	149539964	A->G	-	ENSG00000131013	PPIL4	protein_coding	Intergenic	.	.	Alu	0.153846
6	149540529	A->G	-	ENSG00000131013	PPIL4	protein_coding	Intergenic	.	.	Alu	0.2
6	149682660	A->G	-	ENSG00000131023	LATS1	protein_coding	Intergenic	.	.	Alu	0.2
6	150869896	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.0952381
6	150869927	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.1
6	150869931	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.105263
6	150886720	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.384615
6	150894114	A->G	+	ENSG00000120254	MTHFD1L	protein_coding	Intergenic	.	.	Alu	0.142857
6	157945372	A->G	+	.	.	.	Intergenic	.	.	Alu	0.3
6	158651959	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.181818
6	158653292	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.142857
6	158653385	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.133333
6	158653427	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.105263
6	158653451	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.25
6	158653455	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.16
6	158653456	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.08
6	158657383	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.142857
6	158673118	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.117647
6	158673128	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.333333
6	158673196	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.111111
6	158673488	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.416667
6	158673495	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.538462
6	158673569	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.133333
6	158673898	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.2
6	158673919	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.166667
6	158673922	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.142857
6	158673937	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.333333
6	158673964	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.153846
6	158674010	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.4
6	158674026	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.4
6	158685283	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.466667
6	158685313	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.4
6	158685314	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.133333
6	158685698	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.166667
6	158685707	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.1
6	158685737	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.736842
6	158685738	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.1
6	158691227	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.272727
6	158709880	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.230769
6	158720211	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.1875
6	158721479	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.166667
6	158721652	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.285714
6	158721750	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.3
6	158721766	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.333333
6	158723344	A->G	+	ENSG00000164674	SYTL3	protein_coding	Intergenic	.	.	Alu	0.142857
6	158764919	A->G	+	.	.	.	Intergenic	.	.	Alu	0.75
6	158764932	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	158764933	A->G	+	.	.	.	Intergenic	.	.	Alu	0.136364
6	158764975	A->G	+	.	.	.	Intergenic	.	.	Alu	0.173913
6	158764994	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0714286
6	158765003	A->G	+	.	.	.	Intergenic	.	.	Alu	0.235294
6	158765035	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	158765051	A->G	+	.	.	.	Intergenic	.	.	Alu	0.666667
6	158765055	A->G	+	.	.	.	Intergenic	.	.	Alu	0.333333
6	158765075	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
6	158765103	A->G	+	.	.	.	Intergenic	.	.	Alu	0.357143
6	158765123	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
6	158765133	A->G	+	.	.	.	Intergenic	.	.	Alu	0.8125
6	158765170	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
6	158765330	A->G	+	.	.	.	Intergenic	.	.	Alu	0.181818
6	158765331	A->G	+	.	.	.	Intergenic	.	.	Alu	0.363636
6	158765334	A->G	+	.	.	.	Intergenic	.	.	Alu	0.272727
6	158765345	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
6	158765350	A->G	+	.	.	.	Intergenic	.	.	Alu	0.615385
6	158765463	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0689655
6	158765464	A->G	+	.	.	.	Intergenic	.	.	Alu	0.451613
6	158765465	A->G	+	.	.	.	Intergenic	.	.	Alu	0.387097
6	158765477	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0740741
6	158779849	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.272727
6	158780017	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.136364
6	158780020	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.133333
6	158780071	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.114286
6	158780100	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.193548
6	158780101	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.241379
6	158780120	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.0666667
6	158792415	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.181818
6	158801293	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.214286
6	158815639	A->G	-	ENSG00000092820	EZR	protein_coding	Intergenic	.	.	Alu	0.0606061
6	159687267	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.133333
6	159687363	A->G	-	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.153846
6	159735194	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.166667
6	159735278	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.545455
6	159735280	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.333333
6	159735338	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.166667
6	159735341	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.416667
6	159735495	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.307692
6	159735496	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.5
6	159735559	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.363636
6	159742794	A->G	+	ENSG00000112096	SOD2	protein_coding	Intergenic	.	.	Alu	0.133333
6	166322457	A->G	-	ENSG00000198818	SFT2D1	protein_coding	Intergenic	.	.	Alu	0.3
6	166332366	A->G	-	ENSG00000198818	SFT2D1	protein_coding	Intergenic	.	.	Alu	0.142857
6	166334511	A->G	-	ENSG00000198818	SFT2D1	protein_coding	Intergenic	.	.	Alu	0.125
6	166918261	A->G	-	ENSG00000249141	AL159163.1	protein_coding	Intergenic	.	.	Alu	0.181818
6	166924787	A->G	-	ENSG00000249141	AL159163.1	protein_coding	Intergenic	.	.	Alu	0.454545
6	166924790	A->G	-	ENSG00000249141	AL159163.1	protein_coding	Intergenic	.	.	Alu	0.2
6	166939131	A->G	-	ENSG00000249141	AL159163.1	protein_coding	Intergenic	.	.	Alu	0.08
6	166942280	A->G	-	ENSG00000249141	AL159163.1	protein_coding	Intergenic	.	.	Alu	0.125
6	166943879	A->G	-	ENSG00000249141	AL159163.1	protein_coding	Intergenic	.	.	Alu	0.0909091
6	170359254	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.166667
6	170359273	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.272727
6	170359472	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.2
6	170359545	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.235294
6	170359674	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.363636
6	170359700	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.25
6	170359701	A->G	+	ENSG00000112584	FAM120B	protein_coding	Intergenic	.	.	Alu	0.25
7	100225689	A->G	+	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.384615
7	100225708	A->G	+	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.142857
7	100225711	A->G	+	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.230769
7	100226374	A->G	+	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.08
7	100228620	A->G	+	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.176471
7	100228627	A->G	+	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.428571
7	100228687	A->G	+	ENSG00000239521	CASTOR3	protein_coding	Intergenic	.	.	Alu	0.272727
7	100343463	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.428571
7	100343471	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.466667
7	100343482	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.176471
7	100343528	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.411765
7	100343531	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.529412
7	100343592	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
7	100343607	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.666667
7	100343631	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
7	100343661	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
7	100343662	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.470588
7	100343674	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.166667
7	100343820	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	100343828	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.2
7	100343829	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.466667
7	100343967	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.571429
7	100343995	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.125
7	100344015	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.105263
7	100344020	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.411765
7	100344031	A->G	+	ENSG00000242294	STAG3L5P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.578947
7	100354414	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.2
7	100361434	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.285714
7	100361490	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.142857
7	100364063	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.153846
7	100365590	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.333333
7	100366188	A->G	+	ENSG00000121716	PILRB	protein_coding	Intergenic	.	.	Alu	0.5
7	100437988	A->G	+	ENSG00000240211	AC092849.1	antisense	Intergenic	.	.	Alu	0.352941
7	104945782	A->G	+	ENSG00000237513	AC007384.1	lincRNA	Intergenic	.	.	Alu	0.0909091
7	105028566	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105048095	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.3
7	105048115	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105048116	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.166667
7	105085879	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.2
7	105086515	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intergenic	.	.	Alu	0.5
7	105537224	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.2
7	105537234	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.272727
7	105537235	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.181818
7	105540332	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.181818
7	105540436	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.181818
7	105540523	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.133333
7	105540530	A->G	+	ENSG00000135249	RINT1	protein_coding	Intergenic	.	.	Alu	0.133333
7	107171331	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.133333
7	107171332	A->G	+	ENSG00000105856	HBP1	protein_coding	Intergenic	.	.	Alu	0.2
7	108477642	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.117647
7	108477715	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.176471
7	108477812	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.166667
7	108478671	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0869565
7	108482223	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.133333
7	108482227	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0666667
7	108482236	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.2
7	108482254	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0909091
7	108482308	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.1
7	108484425	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0769231
7	108484444	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0526316
7	108484469	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.0487805
7	108484517	A->G	-	ENSG00000135241	PNPLA8	protein_coding	Intergenic	.	.	Alu	0.235294
7	112453645	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0714286
7	112454928	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.176471
7	112454966	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.194444
7	112454984	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.142857
7	112455012	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.117647
7	112455047	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.105263
7	112455084	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0666667
7	112455116	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.142857
7	112455292	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0425532
7	112455374	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0888889
7	112455378	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0434783
7	112455406	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0697674
7	112455424	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0888889
7	112460303	A->G	+	ENSG00000006652	IFRD1	protein_coding	Intergenic	.	.	Alu	0.0588235
7	116875686	A->G	+	ENSG00000235945	AC002543.1	processed_pseudogene	Intergenic	.	.	Alu	0.166667
7	116907716	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.214286
7	116915224	A->G	+	ENSG00000198898	CAPZA2	protein_coding	Intergenic	.	.	Alu	0.181818
7	128631768	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0612245
7	128632130	A->G	+	.	.	.	Intergenic	.	.	Alu	0.230769
7	128653262	A->G	+	.	.	.	Intergenic	.	.	Alu	0.411765
7	128653270	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
7	128659187	A->G	+	.	.	.	Intergenic	.	.	Alu	0.153846
7	128659212	A->G	+	.	.	.	Intergenic	.	.	Alu	0.176471
7	128659224	A->G	+	.	.	.	Intergenic	.	.	Alu	0.307692
7	128659234	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
7	128659236	A->G	+	.	.	.	Intergenic	.	.	Alu	0.125
7	128659240	A->G	+	.	.	.	Intergenic	.	.	Alu	0.25
7	128659247	A->G	+	.	.	.	Intergenic	.	.	Alu	0.142857
7	128659252	A->G	+	.	.	.	Intergenic	.	.	Alu	0.5
7	128659276	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
7	128864088	A->G	+	ENSG00000128524	ATP6V1F	protein_coding	Intergenic	.	.	Alu	0.166667
7	130889385	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.181818
7	130889392	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.2
7	130889816	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.272727
7	130900356	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intergenic	.	.	Alu	0.25
7	130957858	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.133333
7	130964718	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.153846
7	130964727	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130964742	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.214286
7	130966355	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.235294
7	130989954	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.357143
7	130989955	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	130990391	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.307692
7	130992676	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	131010253	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.133333
7	131016199	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0714286
7	131017127	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0869565
7	131030322	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.117647
7	131041188	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.166667
7	131069009	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.181818
7	131080659	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.5625
7	131081480	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.142857
7	131081486	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.157895
7	131087987	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.08
7	131089074	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0740741
7	131089189	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.125
7	131091790	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.115385
7	131091894	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.15
7	131091896	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.1
7	131093626	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.105263
7	131093647	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.05
7	131093675	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.0833333
7	131100073	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intergenic	.	.	Alu	0.12766
7	135582124	A->G	+	ENSG00000155561	NUP205	protein_coding	Intergenic	.	.	Alu	0.272727
7	135582130	A->G	+	ENSG00000155561	NUP205	protein_coding	Intergenic	.	.	Alu	0.2
7	139073066	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.3
7	139073099	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.454545
7	139073133	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139073199	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.142857
7	139073216	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.2
7	139073556	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.2
7	139073668	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139073669	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.125
7	139073670	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.3125
7	139076726	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.142857
7	139080519	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	Intergenic	.	.	Alu	0.0461538
7	139390054	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.181818
7	139395882	A->G	+	ENSG00000146963	LUC7L2	protein_coding	Intergenic	.	.	Alu	0.8
7	140094383	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.114286
7	140094422	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.0625
7	140094436	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.0588235
7	140094452	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.0769231
7	140094497	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.133333
7	140095793	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.105263
7	140095796	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.117647
7	140123694	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.214286
7	140123882	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.136364
7	140154434	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.153846
7	140162275	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.133333
7	140169750	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.0869565
7	140171235	A->G	-	ENSG00000006459	KDM7A	protein_coding	Intergenic	.	.	Alu	0.105263
7	140462844	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.2
7	140465442	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.153846
7	140471265	A->G	-	ENSG00000133606	MKRN1	protein_coding	Intergenic	.	.	Alu	0.166667
7	141684150	A->G	-	ENSG00000257093	KIAA1147	protein_coding	Intergenic	.	.	Alu	0.363636
7	148730951	A->G	+	ENSG00000055130	CUL1	protein_coding	Intergenic	.	.	Alu	0.0208333
7	149242265	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.153846
7	149245591	A->G	+	ENSG00000170260	ZNF212	protein_coding	Intergenic	.	.	Alu	0.181818
7	149602958	A->G	-	ENSG00000133624	ZNF767P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.153846
7	149602961	A->G	-	ENSG00000133624	ZNF767P	transcribed_unprocessed_pseudogene	Intergenic	.	.	Alu	0.133333
7	151097385	A->G	+	ENSG00000133612	AGAP3	protein_coding	Intergenic	.	.	Alu	0.272727
7	152433026	A->G	-	ENSG00000055609	KMT2C	protein_coding	Intergenic	.	.	Alu	0.166667
7	157359413	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.181818
7	157359448	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.142857
7	157359473	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.3125
7	157359604	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.25
7	157373005	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0681818
7	157373565	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.0714286
7	157384082	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intergenic	.	.	Alu	0.130435
7	158738010	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0666667
7	158738022	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158738148	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	158738190	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.176471
7	158738200	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.294118
7	158738203	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.25
7	158738225	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.105263
7	158738226	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.157895
7	158738230	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158738249	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0952381
7	158738265	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.4
7	158738266	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.214286
7	158738405	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0697674
7	158738470	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0697674
7	158738481	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0625
7	158738520	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0555556
7	158738522	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158738551	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.117647
7	158738557	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.142857
7	158738580	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158738619	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.15
7	158738646	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.55
7	158738647	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.5
7	158738654	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.136364
7	158738655	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158738725	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.277778
7	158744590	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.208333
7	158746124	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.173913
7	158746189	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.26087
7	158769957	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.294118
7	158770099	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.176471
7	158770103	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.133333
7	158770647	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158770914	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.208333
7	158772113	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.333333
7	158789569	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.0740741
7	158790755	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.105263
7	158790762	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.157895
7	158790773	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.263158
7	158790780	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.125
7	158790845	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.272727
7	158790914	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.2
7	158797207	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.1
7	158797245	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.105263
7	158797317	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.166667
7	158797326	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.153846
7	158797349	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.181818
7	158823036	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.16
7	158823081	A->G	-	ENSG00000117868	ESYT2	protein_coding	Intergenic	.	.	Alu	0.105263
8	100152592	A->G	+	ENSG00000147669	POLR2K	protein_coding	Intergenic	.	.	Alu	0.105263
8	100152596	A->G	+	ENSG00000147669	POLR2K	protein_coding	Intergenic	.	.	Alu	0.117647
8	100300154	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.363636
8	100300157	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.454545
8	100300170	A->G	-	ENSG00000034677	RNF19A	protein_coding	Intergenic	.	.	Alu	0.222222
8	100713719	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.100806
8	100713773	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.20339
8	100714474	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.025
8	100714539	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.285714
8	100714607	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.036036
8	100714634	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0659341
8	100714667	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0272109
8	100716159	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.153374
8	100716160	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0993789
8	100716186	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.020202
8	100716212	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0205128
8	100716230	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0310559
8	100716236	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.234637
8	100716239	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0378378
8	100716256	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0306122
8	100716279	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.266667
8	100716289	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.037037
8	100716293	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0222222
8	100716314	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0744186
8	100716393	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0443038
8	100717108	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0208333
8	100717113	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.127273
8	100717117	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0714286
8	100717148	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.132743
8	100717149	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.125
8	100717175	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.103093
8	100717215	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.130952
8	100717221	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0425532
8	100717226	A->G	-	ENSG00000070756	PABPC1	protein_coding	Intergenic	.	.	Alu	0.0340909
8	100921687	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.157895
8	100928036	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.0714286
8	100928090	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.235294
8	100929324	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.142857
8	100929337	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.133333
8	100929419	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.230769
8	100930237	A->G	-	ENSG00000164924	YWHAZ	protein_coding	Intergenic	.	.	Alu	0.12
8	102853450	A->G	-	ENSG00000155096	AZIN1	protein_coding	Intergenic	.	.	Alu	0.333333
8	103421818	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.416667
8	103423367	A->G	+	ENSG00000164934	DCAF13	protein_coding	Intergenic	.	.	Alu	0.642857
8	108227216	A->G	-	ENSG00000253754	AC087620.1	antisense	Intergenic	.	.	Alu	0.428571
8	109471878	A->G	+	ENSG00000205038	PKHD1L1	protein_coding	Intergenic	.	.	Alu	1
8	119806002	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.133333
8	119827093	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.181818
8	119827098	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.181818
8	119827111	A->G	-	ENSG00000064313	TAF2	protein_coding	Intergenic	.	.	Alu	0.181818
8	122792862	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.291667
8	122801492	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.388889
8	122801567	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.277778
8	122801592	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.181818
8	122801594	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.25
8	122801617	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.153846
8	122801666	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.466667
8	122802128	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.0769231
8	122802141	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.25
8	122827145	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.25
8	122827224	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.12
8	122827299	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.125
8	122827300	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.2
8	122827840	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.178571
8	122827856	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.0769231
8	122827863	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.291667
8	122827878	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.0952381
8	122850201	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.4
8	122880533	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.2
8	122880546	A->G	+	ENSG00000178764	ZHX2	protein_coding	Intergenic	.	.	Alu	0.4
8	124478869	A->G	+	ENSG00000170881	RNF139	protein_coding	Intergenic	.	.	Alu	0.133333
8	124490513	A->G	+	ENSG00000253106	AC090198.1	antisense	Intergenic	.	.	Alu	0.181818
8	124490860	A->G	+	ENSG00000253106	AC090198.1	antisense	Intergenic	.	.	Alu	0.166667
8	124491058	A->G	+	ENSG00000253106	AC090198.1	antisense	Intergenic	.	.	Alu	0.142857
8	124492249	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	0.2
8	124492643	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	0.176471
8	124492851	A->G	+	ENSG00000147687	TATDN1	protein_coding	Intergenic	.	.	Alu	0.166667
8	124696596	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.142857
8	124696605	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.263158
8	124697303	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.272727
8	124697325	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.2
8	124697522	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.166667
8	124697552	A->G	-	ENSG00000170873	MTSS1	protein_coding	Intergenic	.	.	Alu	0.181818
8	125072090	A->G	-	ENSG00000164961	WASHC5	protein_coding	Intergenic	.	.	Alu	0.230769
8	125093827	A->G	+	ENSG00000156831	NSMCE2	protein_coding	Intergenic	.	.	Alu	0.7
8	129966950	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	129990576	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	130002404	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.25
8	130002930	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.105263
8	130003136	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.166667
8	130008043	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.181818
8	130008046	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intergenic	.	.	Alu	0.3
8	130353613	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.272727
8	130353746	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.125
8	130353748	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.235294
8	130353784	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.125
8	130353788	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.173913
8	130353795	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.304348
8	130353814	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.291667
8	130353819	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.238095
8	130353949	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.333333
8	130353998	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.25
8	130354025	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.3125
8	130354070	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.142857
8	130354086	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.181818
8	130354091	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.230769
8	130354162	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.363636
8	130354954	A->G	-	ENSG00000153317	ASAP1	protein_coding	Intergenic	.	.	Alu	0.0740741
8	131909369	A->G	+	ENSG00000132294	EFR3A	protein_coding	Intergenic	.	.	Alu	0.166667
8	133277338	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.105263
8	133279006	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.0689655
8	133279122	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.1
8	133279132	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.111111
8	133281122	A->G	-	ENSG00000104419	NDRG1	protein_coding	Intergenic	.	.	Alu	0.0952381
8	133495190	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.1
8	133539813	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	133561980	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.153846
8	133562039	A->G	-	ENSG00000008513	ST3GAL1	protein_coding	Intergenic	.	.	Alu	0.181818
8	140509541	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
8	140541820	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.117647
8	140543055	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.117647
8	140543594	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.1
8	140570328	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	140610153	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.272727
8	140617288	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.272727
8	140617350	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.25
8	140617946	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.181818
8	140620808	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.2
8	140620809	A->G	-	ENSG00000123908	AGO2	protein_coding	Intergenic	.	.	Alu	0.4
8	144885628	A->G	-	ENSG00000196150	ZNF250	protein_coding	Intergenic	.	.	Alu	0.3
9	100023937	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.2
9	100023938	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.2
9	100023952	A->G	-	ENSG00000023318	ERP44	protein_coding	Intergenic	.	.	Alu	0.9
9	104857042	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.384615
9	104857377	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.2
9	104857386	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.2
9	104857408	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.142857
9	104857448	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104857450	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.25
9	104857469	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.2
9	104914294	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.454545
9	104914453	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.117647
9	104919512	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.181818
9	104919526	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104919529	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.166667
9	104919536	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.384615
9	104919565	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.111111
9	104920597	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.3
9	104922808	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.08
9	104922826	A->G	-	ENSG00000165029	ABCA1	protein_coding	Intergenic	.	.	Alu	0.0769231
9	109085198	A->G	-	ENSG00000106771	TMEM245	protein_coding	Intergenic	.	.	Alu	0.166667
9	111479893	A->G	-	ENSG00000136813	ECPAS	protein_coding	Intergenic	.	.	Alu	0.181818
9	112039313	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
9	112039353	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
9	112039463	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
9	114351723	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.2
9	114351744	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.105263
9	114351748	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.277778
9	114351825	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.08
9	114352821	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.181818
9	114353360	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.307692
9	114353362	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.5
9	114353375	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.142857
9	114353388	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.230769
9	114353392	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.166667
9	114353403	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.2
9	114353443	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.181818
9	114354929	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.36
9	114354937	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.1
9	114354952	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.0689655
9	114354999	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.12
9	114355012	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.227273
9	114355052	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.0952381
9	114355054	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.0952381
9	114355068	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.176471
9	114382408	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.181818
9	114385071	A->G	-	ENSG00000106948	AKNA	protein_coding	Intergenic	.	.	Alu	0.0606061
9	114595527	A->G	+	ENSG00000136888	ATP6V1G1	protein_coding	Intergenic	.	.	Alu	0.166667
9	120774460	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.533333
9	120774478	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.538462
9	120785276	A->G	-	ENSG00000119402	FBXW2	protein_coding	Intergenic	.	.	Alu	0.545455
9	120898147	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
9	120898152	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
9	120898182	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
9	120898188	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	120898209	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
9	120898213	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
9	120899117	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
9	120900169	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
9	122817268	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.454545
9	122817283	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.416667
9	122817293	A->G	-	ENSG00000136940	PDCL	protein_coding	Intergenic	.	.	Alu	0.2
9	125348607	A->G	+	ENSG00000165219	GAPVD1	protein_coding	Intergenic	.	.	Alu	0.333333
9	127445828	A->G	+	.	.	.	Intergenic	.	.	Alu	0.105263
9	127445987	A->G	+	.	.	.	Intergenic	.	.	Alu	0.214286
9	127445988	A->G	+	.	.	.	Intergenic	.	.	Alu	0.428571
9	127515966	A->G	-	ENSG00000136830	FAM129B	protein_coding	Intergenic	.	.	Alu	0.1
9	127578805	A->G	-	ENSG00000136830	FAM129B	protein_coding	Intergenic	.	.	Alu	0.151515
9	127791362	A->G	+	.	.	.	Intergenic	.	.	Alu	0.102564
9	127791374	A->G	+	.	.	.	Intergenic	.	.	Alu	0.166667
9	127791388	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0487805
9	127791405	A->G	+	.	.	.	Intergenic	.	.	Alu	0.06
9	127791408	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0416667
9	127791418	A->G	+	.	.	.	Intergenic	.	.	Alu	0.04
9	127804942	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.666667
9	127804945	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.176471
9	127804969	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.333333
9	127804989	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.166667
9	127806140	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.111111
9	127806359	A->G	+	ENSG00000136877	FPGS	protein_coding	Intergenic	.	.	Alu	0.272727
9	127851766	A->G	-	ENSG00000106991	ENG	protein_coding	Intergenic	.	.	Alu	0.133333
9	127901817	A->G	-	ENSG00000257524	AL157935.2	protein_coding	Intergenic	.	.	Alu	0.470588
9	127901857	A->G	-	ENSG00000257524	AL157935.2	protein_coding	Intergenic	.	.	Alu	0.176471
9	127901888	A->G	-	ENSG00000257524	AL157935.2	protein_coding	Intergenic	.	.	Alu	0.111111
9	127901944	A->G	-	ENSG00000257524	AL157935.2	protein_coding	Intergenic	.	.	Alu	0.157895
9	127901950	A->G	-	ENSG00000257524	AL157935.2	protein_coding	Intergenic	.	.	Alu	0.1
9	128607214	A->G	+	ENSG00000197694	SPTAN1	protein_coding	Intergenic	.	.	Alu	0.2
9	129499630	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intergenic	.	.	Alu	0.153846
9	129807591	A->G	+	ENSG00000136816	TOR1B	protein_coding	Intergenic	.	.	Alu	0.181818
9	129808379	A->G	+	ENSG00000136816	TOR1B	protein_coding	Intergenic	.	.	Alu	0.125
9	129808405	A->G	+	ENSG00000136816	TOR1B	protein_coding	Intergenic	.	.	Alu	0.461538
9	129808444	A->G	+	ENSG00000136816	TOR1B	protein_coding	Intergenic	.	.	Alu	0.181818
9	129808814	A->G	+	ENSG00000136816	TOR1B	protein_coding	Intergenic	.	.	Alu	0.25
9	129808826	A->G	+	ENSG00000136816	TOR1B	protein_coding	Intergenic	.	.	Alu	0.153846
9	129819385	A->G	-	ENSG00000136827	TOR1A	protein_coding	Intergenic	.	.	Alu	0.166667
9	129820825	A->G	-	ENSG00000136827	TOR1A	protein_coding	Intergenic	.	.	Alu	0.428571
9	129821194	A->G	-	ENSG00000136827	TOR1A	protein_coding	Intergenic	.	.	Alu	0.111111
9	129821220	A->G	-	ENSG00000136827	TOR1A	protein_coding	Intergenic	.	.	Alu	0.125
9	129843315	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.142857
9	129843337	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.214286
9	129843497	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.363636
9	129844944	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.181818
9	129845551	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.666667
9	129845625	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.230769
9	129845626	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.153846
9	129845660	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.444444
9	129846136	A->G	+	ENSG00000136878	USP20	protein_coding	Intergenic	.	.	Alu	0.181818
9	129939012	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129939075	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.4
9	129941634	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129947854	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.153846
9	129948830	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129952249	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129952265	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129953404	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129954771	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	129954885	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0769231
9	129954894	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129954987	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0625
9	129955299	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.08
9	129955306	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.107143
9	129955398	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.142857
9	129955486	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	129955487	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.230769
9	129955511	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.214286
9	129955638	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.08
9	129955717	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129956116	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.0909091
9	129958215	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	129967246	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.166667
9	129967299	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.2
9	130015753	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.5
9	130024333	A->G	-	ENSG00000187239	FNBP1	protein_coding	Intergenic	.	.	Alu	0.133333
9	130699793	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.222222
9	130699800	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.125
9	130699820	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.416667
9	130700100	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.5
9	130700621	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.4
9	130700633	A->G	+	ENSG00000130713	EXOSC2	protein_coding	Intergenic	.	.	Alu	0.272727
9	130706464	A->G	+	.	.	.	Intergenic	.	.	Alu	0.0869565
9	130706472	A->G	+	.	.	.	Intergenic	.	.	Alu	0.130435
9	130707235	A->G	+	.	.	.	Intergenic	.	.	Alu	0.2
9	130840771	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.125
9	130841556	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.125
9	130841557	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.125
9	130841692	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.130435
9	130841732	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.0952381
9	130841733	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.190476
9	130844636	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.166667
9	130844640	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.1
9	130844681	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.333333
9	130844716	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.208333
9	130849612	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.133333
9	130849618	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.1875
9	130849657	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.125
9	130849720	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.2
9	130849732	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.222222
9	130849738	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.105263
9	130851023	A->G	+	ENSG00000097007	ABL1	protein_coding	Intergenic	.	.	Alu	0.2
9	131632987	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.125
9	131709343	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.583333
9	131714805	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.3
9	131714983	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
9	131714984	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.142857
9	131715782	A->G	-	ENSG00000107263	RAPGEF1	protein_coding	Intergenic	.	.	Alu	0.272727
9	133111016	A->G	-	ENSG00000160271	RALGDS	protein_coding	Intergenic	.	.	Alu	0.2
9	133111440	A->G	-	ENSG00000160271	RALGDS	protein_coding	Intergenic	.	.	Alu	0.1
9	133415995	A->G	-	ENSG00000148300	REXO4	protein_coding	Intergenic	.	.	Alu	0.0909091
9	134904528	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0408163
9	134904535	A->G	-	.	.	.	Intergenic	.	.	Alu	0.049505
9	134904544	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0581395
9	134904557	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0235294
9	134904561	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0315789
9	134904591	A->G	-	.	.	.	Intergenic	.	.	Alu	0.141176
9	134904613	A->G	-	.	.	.	Intergenic	.	.	Alu	0.027027
9	134904656	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0277778
9	134904711	A->G	-	.	.	.	Intergenic	.	.	Alu	0.05
9	134904766	A->G	-	.	.	.	Intergenic	.	.	Alu	0.176471
9	134904777	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0714286
9	134905541	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0508475
9	134905576	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0892857
9	134905607	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0357143
9	134905659	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0392157
9	134905665	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0392157
9	134905756	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0789474
9	136458896	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.3
9	136479449	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.181818
9	136479477	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.2
9	136479501	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.2
9	136479878	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.0909091
9	136479902	A->G	-	ENSG00000148396	SEC16A	protein_coding	Intergenic	.	.	Alu	0.1
9	137609760	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.153846
9	137609765	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.214286
9	137609788	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.2
9	137610415	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.333333
9	137610445	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.125
9	137610446	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.133333
9	137610465	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.214286
9	137610476	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.230769
9	137610959	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.2
9	137610971	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.2
9	137611294	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.4
9	137611300	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.3
9	137611428	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.454545
9	137611438	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intergenic	.	.	Alu	0.4
10	100253112	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.142857
10	100253135	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.333333
10	100253148	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.357143
10	100253152	A->G	-	ENSG00000095485	CWF19L1	protein_coding	Intergenic	.	.	Alu	0.285714
10	100527481	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.4
10	100527520	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.333333
10	100527521	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.166667
10	100527893	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.363636
10	100527925	A->G	-	ENSG00000166136	NDUFB8	protein_coding	Intergenic	.	.	Alu	0.2
10	100538562	A->G	+	ENSG00000166135	HIF1AN	protein_coding	Intergenic	.	.	Alu	0.363636
10	101788195	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.25
10	101789307	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.214286
10	101789333	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4
10	101789335	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101789422	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.304348
10	101806848	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.181818
10	101806856	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.25
10	101810863	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.105263
10	101810886	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.363636
10	101810887	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.181818
10	101810918	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.2
10	101810923	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.264706
10	101810937	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0512821
10	101810942	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.184211
10	101810957	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0967742
10	101810963	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.166667
10	101811172	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.4375
10	101811177	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0714286
10	101811186	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.178571
10	101811206	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.52
10	101811209	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.26087
10	101811240	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0789474
10	101811241	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0540541
10	101811264	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.361111
10	101811277	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0625
10	101811342	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0952381
10	101811500	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.136364
10	101811578	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.0652174
10	101811678	A->G	-	ENSG00000198408	OGA	protein_coding	Intergenic	.	.	Alu	0.047619
10	103178037	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.176471
10	103179514	A->G	-	ENSG00000076685	NT5C2	protein_coding	Intergenic	.	.	Alu	0.166667
10	104257475	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.09375
10	104261077	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.128205
10	104261094	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.0555556
10	104261115	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.0588235
10	104261138	A->G	+	ENSG00000148834	GSTO1	protein_coding	Intergenic	.	.	Alu	0.0625
10	104325671	A->G	-	ENSG00000228261	AL162742.1	lincRNA	Intergenic	.	.	Alu	0.2
10	104325681	A->G	-	ENSG00000228261	AL162742.1	lincRNA	Intergenic	.	.	Alu	0.214286
10	104325682	A->G	-	ENSG00000228261	AL162742.1	lincRNA	Intergenic	.	.	Alu	0.296296
10	104331086	A->G	-	ENSG00000148841	ITPRIP	protein_coding	Intergenic	.	.	Alu	0.09375
10	104331089	A->G	-	ENSG00000148841	ITPRIP	protein_coding	Intergenic	.	.	Alu	0.171429
10	104331848	A->G	-	ENSG00000148841	ITPRIP	protein_coding	Intergenic	.	.	Alu	0.222222
10	110113157	A->G	+	ENSG00000148700	ADD3	protein_coding	Intergenic	.	.	Alu	0.733333
10	110925693	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.214286
10	110925734	A->G	+	ENSG00000108061	SHOC2	protein_coding	Intergenic	.	.	Alu	0.125
10	114468795	A->G	-	ENSG00000099204	ABLIM1	protein_coding	Intergenic	.	.	Alu	0.25
10	114468807	A->G	-	ENSG00000099204	ABLIM1	protein_coding	Intergenic	.	.	Alu	0.5
10	114468838	A->G	-	ENSG00000099204	ABLIM1	protein_coding	Intergenic	.	.	Alu	0.2
10	114471115	A->G	-	ENSG00000099204	ABLIM1	protein_coding	Intergenic	.	.	Alu	0.157895
10	114518377	A->G	-	ENSG00000099204	ABLIM1	protein_coding	Intergenic	.	.	Alu	0.25
10	114518484	A->G	-	ENSG00000099204	ABLIM1	protein_coding	Intergenic	.	.	Alu	0.176471
10	114518488	A->G	-	ENSG00000099204	ABLIM1	protein_coding	Intergenic	.	.	Alu	0.176471
10	114518716	A->G	-	ENSG00000099204	ABLIM1	protein_coding	Intergenic	.	.	Alu	0.6
10	119052513	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.333333
10	119052535	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.347826
10	119052553	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.111111
10	119052579	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.111111
10	119052603	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.214286
10	119052608	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.133333
10	119052648	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119052649	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.25
10	119052655	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119053491	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.0952381
10	119053494	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.235294
10	119053495	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.125
10	119053701	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119053988	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.142857
10	119054645	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119054675	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119054680	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.4
10	119054681	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.166667
10	119054700	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.214286
10	119054965	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.277778
10	119054966	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.111111
10	119054975	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.166667
10	119054992	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.238095
10	119054993	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.125
10	119055060	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.133333
10	119055086	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.153846
10	119055163	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.421053
10	119071903	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.166667
10	119071949	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.263158
10	119071978	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.176471
10	119072521	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.482759
10	119072525	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.206897
10	119072545	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.235294
10	119072577	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.105263
10	119072590	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119072591	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.133333
10	119074299	A->G	-	ENSG00000107581	EIF3A	protein_coding	Intergenic	.	.	Alu	0.2
10	119105763	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.181818
10	119105807	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.75
10	119105814	A->G	+	ENSG00000119979	FAM45A	protein_coding	Intergenic	.	.	Alu	0.133333
10	119514440	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.25
10	119514461	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.2
10	119514546	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.357143
10	119514575	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.25
10	119514576	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.272727
10	119522911	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.166667
10	119522912	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.25
10	119522913	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.153846
10	119523126	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.0909091
10	119523408	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.181818
10	119523447	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.363636
10	119523448	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.363636
10	119523463	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.363636
10	119523658	A->G	-	ENSG00000148908	RGS10	protein_coding	Intergenic	.	.	Alu	0.9
10	124662818	A->G	-	ENSG00000189319	FAM53B	protein_coding	Intergenic	.	.	Alu	0.153846
10	124785634	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.3
10	124785637	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.2
10	124787620	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.428571
10	124787621	A->G	-	ENSG00000258539	AC068896.1	protein_coding	Intergenic	.	.	Alu	0.142857
10	128051962	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0666667
10	128053104	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0454545
10	128053108	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.075
10	128053166	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0833333
10	128053226	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.075
10	128053235	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.047619
10	128053900	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.0869565
10	128054574	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.181818
10	128054657	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.473684
10	128054658	A->G	+	ENSG00000132334	PTPRE	protein_coding	Intergenic	.	.	Alu	0.210526
10	133264124	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.2
10	133264150	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.0882353
10	133264158	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.466667
10	133264159	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.0689655
10	133264226	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.0645161
10	133264264	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.354839
10	133264356	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.0689655
10	133265547	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.115385
10	133265571	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.0909091
10	133265597	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.447368
10	133265598	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.0526316
10	133265602	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.37931
10	133265662	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.0967742
10	133265722	A->G	-	ENSG00000151651	ADAM8	protein_coding	Intergenic	.	.	Alu	0.0540541
10	133294651	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.117647
10	133294713	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.214286
10	133296658	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.2
10	133296660	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.4
10	133297298	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.6
10	133297316	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	Intergenic	.	.	Alu	0.307692
11	102331876	A->G	+	ENSG00000023445	BIRC3	protein_coding	Intergenic	.	.	Alu	0.133333
11	108102551	A->G	+	ENSG00000166266	CUL5	protein_coding	Intergenic	.	.	Alu	0.2
11	108285029	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.181818
11	108285060	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.384615
11	108285086	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.25
11	108285099	A->G	+	ENSG00000149311	ATM	protein_coding	Intergenic	.	.	Alu	0.3
11	116922047	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.9
11	116922048	A->G	-	ENSG00000160584	SIK3	protein_coding	Intergenic	.	.	Alu	0.2
11	117153989	A->G	+	ENSG00000168092	PAFAH1B2	protein_coding	Intergenic	.	.	Alu	0.5
11	118335284	A->G	-	.	.	.	Intergenic	.	.	Alu	0.111111
11	118335340	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
11	118335381	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	118335382	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	118335428	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	118335457	A->G	-	.	.	.	Intergenic	.	.	Alu	0.461538
11	118335895	A->G	-	.	.	.	Intergenic	.	.	Alu	0.272727
11	118335924	A->G	-	.	.	.	Intergenic	.	.	Alu	0.25
11	118335944	A->G	-	.	.	.	Intergenic	.	.	Alu	0.230769
11	118336065	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
11	118336154	A->G	-	.	.	.	Intergenic	.	.	Alu	0.615385
11	118336254	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	118336282	A->G	-	.	.	.	Intergenic	.	.	Alu	0.318182
11	118336539	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
11	118336545	A->G	-	.	.	.	Intergenic	.	.	Alu	0.166667
11	118336559	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
11	118336583	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	118336590	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	118336625	A->G	-	.	.	.	Intergenic	.	.	Alu	0.214286
11	118336652	A->G	-	.	.	.	Intergenic	.	.	Alu	0.115385
11	118336692	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0769231
11	118336697	A->G	-	.	.	.	Intergenic	.	.	Alu	0.12
11	118336702	A->G	-	.	.	.	Intergenic	.	.	Alu	0.208333
11	118336724	A->G	-	.	.	.	Intergenic	.	.	Alu	0.823529
11	118336737	A->G	-	.	.	.	Intergenic	.	.	Alu	0.421053
11	118336738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
11	118336760	A->G	-	.	.	.	Intergenic	.	.	Alu	0.259259
11	118337456	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	118337781	A->G	-	.	.	.	Intergenic	.	.	Alu	0.4
11	118338056	A->G	-	.	.	.	Intergenic	.	.	Alu	0.5
11	118338324	A->G	-	.	.	.	Intergenic	.	.	Alu	0.2
11	118577347	A->G	+	ENSG00000095139	ARCN1	protein_coding	Intergenic	.	.	Alu	0.25
11	118580951	A->G	+	ENSG00000095139	ARCN1	protein_coding	Intergenic	.	.	Alu	0.230769
11	118753418	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.3125
11	118753478	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.363636
11	118753484	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.25
11	118753883	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.142857
11	118754035	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.133333
11	118754036	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.133333
11	118754041	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.214286
11	118754179	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0833333
11	118754185	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.105263
11	118754257	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.142857
11	118760405	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.571429
11	118760427	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.47619
11	118765988	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0869565
11	118765989	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0652174
11	118766011	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0545455
11	118766024	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0434783
11	118766208	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0512821
11	118766352	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.28
11	118766670	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.117647
11	118766679	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.0606061
11	118766830	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.16
11	118766858	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.1
11	118766982	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.133333
11	118775880	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.08
11	118781779	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.181818
11	118782717	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.181818
11	118784052	A->G	-	ENSG00000110367	DDX6	protein_coding	Intergenic	.	.	Alu	0.181818
11	118868857	A->G	-	.	.	.	Intergenic	.	.	Alu	0.363636
11	118868902	A->G	-	.	.	.	Intergenic	.	.	Alu	0.285714
11	118868930	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
11	118868949	A->G	-	.	.	.	Intergenic	.	.	Alu	0.125
11	118868998	A->G	-	.	.	.	Intergenic	.	.	Alu	0.133333
11	118906194	A->G	-	ENSG00000186174	BCL9L	protein_coding	Intergenic	.	.	Alu	0.0740741
11	118909316	A->G	-	ENSG00000186174	BCL9L	protein_coding	Intergenic	.	.	Alu	0.222222
11	118999509	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0909091
11	118999520	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0833333
11	118999523	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0833333
11	118999528	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0952381
11	118999558	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	118999559	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.125
11	118999942	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.125
11	118999957	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.176471
11	118999974	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.117647
11	118999977	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119000039	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0689655
11	119000542	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.1875
11	119000570	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.181818
11	119000840	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.09375
11	119001896	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0833333
11	119002156	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.272727
11	119002173	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.333333
11	119002174	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.333333
11	119002179	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.363636
11	119002547	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.142857
11	119002572	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119002600	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.26087
11	119002606	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.5
11	119002618	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.12
11	119002805	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.478261
11	119002885	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.333333
11	119002886	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.529412
11	119002889	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.315789
11	119002890	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.157895
11	119002903	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.111111
11	119002912	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.117647
11	119002915	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.222222
11	119002925	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.157895
11	119003487	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.294118
11	119003498	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.25
11	119003507	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.15
11	119003508	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.368421
11	119003559	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.2
11	119003560	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.25
11	119003718	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0555556
11	119003719	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0769231
11	119004303	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.272727
11	119004347	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.454545
11	119004348	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.636364
11	119004365	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.272727
11	119004448	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.2
11	119004450	A->G	+	ENSG00000254428	AP003392.1	antisense	Intergenic	.	.	Alu	0.631579
11	119004913	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0952381
11	119004939	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.428571
11	119004949	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.210526
11	119004979	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.25
11	119004980	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.153846
11	119005544	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.12
11	119005549	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.15
11	119005557	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.210526
11	119005672	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119006443	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119006608	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.111111
11	119006612	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.157895
11	119006631	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0869565
11	119006643	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.16
11	119007240	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.5
11	119007243	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.181818
11	119007381	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0869565
11	119007509	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.111111
11	119007534	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.28
11	119007546	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.25
11	119007567	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.25
11	119007602	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.444444
11	119007607	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.136364
11	119007623	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0833333
11	119007632	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.125
11	119007647	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119007663	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.458333
11	119007707	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.5
11	119007725	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0869565
11	119007734	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.115385
11	119007748	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.09375
11	119007749	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.125
11	119007761	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0555556
11	119009229	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.0882353
11	119009244	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.166667
11	119009327	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intergenic	.	.	Alu	0.133333
11	119016163	A->G	-	ENSG00000118181	RPS25	protein_coding	Intergenic	.	.	Alu	0.181818
11	119016166	A->G	-	ENSG00000118181	RPS25	protein_coding	Intergenic	.	.	Alu	0.0952381
11	119016755	A->G	-	ENSG00000118181	RPS25	protein_coding	Intergenic	.	.	Alu	0.0909091
11	119016769	A->G	-	ENSG00000118181	RPS25	protein_coding	Intergenic	.	.	Alu	0.133333
11	119022381	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intergenic	.	.	Alu	0.263158
11	119022485	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intergenic	.	.	Alu	0.142857
11	119022507	A->G	+	ENSG00000196655	TRAPPC4	protein_coding	Intergenic	.	.	Alu	0.166667
11	119074673	A->G	+	ENSG00000160695	VPS11	protein_coding	Intergenic	.	.	Alu	0.25
11	121532946	A->G	+	ENSG00000137642	SORL1	protein_coding	Intergenic	.	.	Alu	0.2
11	121541302	A->G	+	ENSG00000137642	SORL1	protein_coding	Intergenic	.	.	Alu	0.461538
11	125610503	A->G	+	ENSG00000134910	STT3A	protein_coding	Intergenic	.	.	Alu	0.2
11	126207658	A->G	-	ENSG00000165526	RPUSD4	protein_coding	Intergenic	.	.	Alu	0.2
11	126207782	A->G	-	ENSG00000165526	RPUSD4	protein_coding	Intergenic	.	.	Alu	0.272727
11	126295054	A->G	+	ENSG00000150455	TIRAP	protein_coding	Intergenic	.	.	Alu	0.2
11	130074388	A->G	+	ENSG00000084234	APLP2	protein_coding	Intergenic	.	.	Alu	0.153846
11	130872036	A->G	-	.	.	.	Intergenic	.	.	Alu	0.3
12	100035723	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.0909091
12	100035725	A->G	-	ENSG00000111647	UHRF1BP1L	protein_coding	Intergenic	.	.	Alu	0.1
12	103968039	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.166667
12	103968102	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.2
12	103968105	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.125
12	103968964	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.142857
12	103970604	A->G	+	ENSG00000139372	TDG	protein_coding	Intergenic	.	.	Alu	0.333333
12	104615702	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.181818
12	104615713	A->G	+	ENSG00000171310	CHST11	protein_coding	Intergenic	.	.	Alu	0.181818
12	105195837	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	105196687	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	105196713	A->G	-	ENSG00000136044	APPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	107355814	A->G	+	ENSG00000151136	BTBD11	protein_coding	Intergenic	.	.	Alu	0.25
12	107360831	A->G	+	ENSG00000151136	BTBD11	protein_coding	Intergenic	.	.	Alu	0.111111
12	107750969	A->G	-	ENSG00000110851	PRDM4	protein_coding	Intergenic	.	.	Alu	0.0740741
12	107755306	A->G	-	ENSG00000110851	PRDM4	protein_coding	Intergenic	.	.	Alu	0.153846
12	108621127	A->G	-	.	.	.	Intergenic	.	.	Alu	0.117647
12	108633389	A->G	-	ENSG00000257221	AC007569.1	antisense	Intergenic	.	.	Alu	0.192308
12	108651054	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.5
12	108651069	A->G	-	ENSG00000110880	CORO1C	protein_coding	Intergenic	.	.	Alu	0.176471
12	109942533	A->G	-	ENSG00000139437	TCHP	protein_coding	Intergenic	.	.	Alu	0.2
12	110005175	A->G	+	ENSG00000076513	ANKRD13A	protein_coding	Intergenic	.	.	Alu	0.7
12	110287868	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.272727
12	110328802	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.2
12	110328803	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intergenic	.	.	Alu	0.3
12	110439645	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.3
12	110439712	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.181818
12	110439782	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.105263
12	110442120	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.125
12	110442127	A->G	-	ENSG00000258210	AC144548.1	processed_transcript	Intergenic	.	.	Alu	0.176471
12	110446475	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.2
12	110447518	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.1
12	110447530	A->G	-	ENSG00000111229	ARPC3	protein_coding	Intergenic	.	.	Alu	0.133333
12	111423577	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.923077
12	111427130	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.08
12	111431630	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.0952381
12	111439090	A->G	+	ENSG00000111252	SH2B3	protein_coding	Intergenic	.	.	Alu	0.08
12	112942580	A->G	+	ENSG00000111331	OAS3	protein_coding	Intergenic	.	.	Alu	0.2
12	112942583	A->G	+	ENSG00000111331	OAS3	protein_coding	Intergenic	.	.	Alu	0.2
12	112942607	A->G	+	ENSG00000111331	OAS3	protein_coding	Intergenic	.	.	Alu	0.166667
12	112942696	A->G	+	ENSG00000111331	OAS3	protein_coding	Intergenic	.	.	Alu	0.0869565
12	112942956	A->G	+	ENSG00000111331	OAS3	protein_coding	Intergenic	.	.	Alu	0.2
12	112943116	A->G	+	ENSG00000111331	OAS3	protein_coding	Intergenic	.	.	Alu	0.181818
12	112974697	A->G	+	ENSG00000257452	AC004551.1	antisense	Intergenic	.	.	Alu	0.272727
12	116090928	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.166667
12	116090942	A->G	-	ENSG00000123066	MED13L	protein_coding	Intergenic	.	.	Alu	0.25
12	118137407	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.153846
12	118137436	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.181818
12	118137518	A->G	+	ENSG00000089220	PEBP1	protein_coding	Intergenic	.	.	Alu	0.214286
12	120001808	A->G	+	ENSG00000135127	BICDL1	protein_coding	Intergenic	.	.	Alu	0.3125
12	120001821	A->G	+	ENSG00000135127	BICDL1	protein_coding	Intergenic	.	.	Alu	0.133333
12	120001841	A->G	+	ENSG00000135127	BICDL1	protein_coding	Intergenic	.	.	Alu	0.142857
12	120114154	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.272727
12	120114161	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.166667
12	120114162	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.333333
12	120114165	A->G	-	ENSG00000111737	RAB35	protein_coding	Intergenic	.	.	Alu	0.153846
12	120169091	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.142857
12	120169730	A->G	-	ENSG00000089154	GCN1	protein_coding	Intergenic	.	.	Alu	0.25
12	120569993	A->G	+	ENSG00000022840	RNF10	protein_coding	Intergenic	.	.	Alu	0.181818
12	121021978	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.181818
12	121021979	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.363636
12	121021994	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.181818
12	121025115	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.153846
12	121025171	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121025519	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.133333
12	121025520	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.107143
12	121025582	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.0689655
12	121025649	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.142857
12	121025650	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.0909091
12	121025653	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.24
12	121025662	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.434783
12	121025718	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.571429
12	121030074	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.0681818
12	121030094	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.0487805
12	121030121	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.12
12	121030134	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.625
12	121030139	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.0625
12	121030147	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.0967742
12	121030950	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.434783
12	121030961	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.166667
12	121030994	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.0666667
12	121031003	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.148148
12	121031108	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.0833333
12	121032019	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121035342	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.08
12	121035956	A->G	-	ENSG00000135114	OASL	protein_coding	Intergenic	.	.	Alu	0.2
12	121210705	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.25
12	121211423	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.4
12	121211441	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.7
12	121212340	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.153846
12	121225956	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intergenic	.	.	Alu	0.363636
12	121404275	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.181818
12	121424675	A->G	+	ENSG00000170633	RNF34	protein_coding	Intergenic	.	.	Alu	0.2
12	121433475	A->G	-	ENSG00000089094	KDM2B	protein_coding	Intergenic	.	.	Alu	0.2
12	121672384	A->G	-	ENSG00000139714	MORN3	protein_coding	Intergenic	.	.	Alu	0.2
12	121786283	A->G	-	ENSG00000139725	RHOF	protein_coding	Intergenic	.	.	Alu	0.2
12	121787990	A->G	-	ENSG00000139725	RHOF	protein_coding	Intergenic	.	.	Alu	0.133333
12	122217816	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.181818
12	122219598	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.142857
12	122219600	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.307692
12	122223939	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.1875
12	122223999	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intergenic	.	.	Alu	0.142857
12	122512568	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.08
12	122512574	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.2
12	122512584	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.130435
12	122512610	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.272727
12	122513932	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.125
12	122513949	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.108108
12	122514024	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.333333
12	122514403	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.2
12	122515500	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intergenic	.	.	Alu	0.136364
12	122869716	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.4375
12	122869808	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intergenic	.	.	Alu	0.08
12	123429689	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1875
12	123429709	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.0952381
12	123429735	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.117647
12	123429786	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.111111
12	123432405	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	123433223	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.153846
12	123433332	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	123433517	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	123434184	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.142857
12	123434631	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.3
12	123434651	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.166667
12	123435551	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.115385
12	123435617	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.181818
12	123435627	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.117647
12	123435679	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.1875
12	123435720	A->G	-	ENSG00000150977	RILPL2	protein_coding	Intergenic	.	.	Alu	0.142857
12	123460504	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.153846
12	123460510	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.153846
12	123460511	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.133333
12	123460565	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.133333
12	123460575	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intergenic	.	.	Alu	0.230769
12	123603822	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.545455
12	123603903	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.142857
12	123603920	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.333333
12	123603929	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.133333
12	123604003	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.285714
12	123604168	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.181818
12	123604225	A->G	+	ENSG00000111364	DDX55	protein_coding	Intergenic	.	.	Alu	0.416667
12	130802609	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.375
12	130802667	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.166667
12	130803513	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.133333
12	130803529	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.166667
12	130803545	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.25
12	130803555	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.777778
12	130803584	A->G	-	ENSG00000111450	STX2	protein_coding	Intergenic	.	.	Alu	0.466667
12	131728826	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.166667
12	131728929	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.153846
12	131728933	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.133333
12	131728963	A->G	+	ENSG00000061936	SFSWAP	protein_coding	Intergenic	.	.	Alu	0.411765
12	131938948	A->G	+	ENSG00000177192	PUS1	protein_coding	Intergenic	.	.	Alu	0.5
12	131938957	A->G	+	ENSG00000177192	PUS1	protein_coding	Intergenic	.	.	Alu	0.153846
12	133039665	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.25
12	133039944	A->G	+	ENSG00000198040	ZNF84	protein_coding	Intergenic	.	.	Alu	0.272727
13	109773601	A->G	-	ENSG00000185950	IRS2	protein_coding	Intergenic	.	.	Alu	0.636364
13	113303938	A->G	+	ENSG00000185896	LAMP1	protein_coding	Intergenic	.	.	Alu	0.2
13	114087873	A->G	-	ENSG00000185989	RASA3	protein_coding	Intergenic	.	.	Alu	0.153846
13	114087885	A->G	-	ENSG00000185989	RASA3	protein_coding	Intergenic	.	.	Alu	0.117647
13	114088009	A->G	-	ENSG00000185989	RASA3	protein_coding	Intergenic	.	.	Alu	0.5
13	114088619	A->G	-	ENSG00000185989	RASA3	protein_coding	Intergenic	.	.	Alu	0.153846
13	114088689	A->G	-	ENSG00000185989	RASA3	protein_coding	Intergenic	.	.	Alu	0.153846
13	114088715	A->G	-	ENSG00000185989	RASA3	protein_coding	Intergenic	.	.	Alu	0.3
14	100099085	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.4
14	100099161	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.166667
14	100099305	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.0909091
14	100100658	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.133333
14	100101304	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.363636
14	100101419	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.111111
14	100101937	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.0740741
14	100101967	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.111111
14	100101979	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.166667
14	100110107	A->G	+	ENSG00000196405	EVL	protein_coding	Intergenic	.	.	Alu	0.133333
14	101814594	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.214286
14	101837361	A->G	+	ENSG00000256705	AL137779.1	antisense	Intergenic	.	.	Alu	0.0740741
14	101862025	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.5
14	101881253	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.230769
14	101881261	A->G	+	ENSG00000078304	PPP2R5C	protein_coding	Intergenic	.	.	Alu	0.153846
14	102003529	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.166667
14	102003803	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.3
14	102031265	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.277778
14	102031347	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.117647
14	102031374	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.333333
14	102031470	A->G	+	ENSG00000197102	DYNC1H1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102045517	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.181818
14	102045532	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.272727
14	102046838	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.181818
14	102046924	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.2
14	102046928	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.153846
14	102047009	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intergenic	.	.	Alu	0.133333
14	102595233	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.307692
14	102595355	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.125
14	102596243	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.125
14	102602907	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.2
14	102603493	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.166667
14	102726167	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.166667
14	102726180	A->G	+	ENSG00000089902	RCOR1	protein_coding	Intergenic	.	.	Alu	0.181818
14	102886484	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.214286
14	102886569	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.230769
14	102894936	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.363636
14	102894937	A->G	+	ENSG00000131323	TRAF3	protein_coding	Intergenic	.	.	Alu	0.181818
14	103681486	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.3
14	103688275	A->G	+	ENSG00000126214	KLC1	protein_coding	Intergenic	.	.	Alu	0.25
14	105031738	A->G	-	.	.	.	Intergenic	.	.	Alu	0.181818
14	105045420	A->G	-	.	.	.	Intergenic	.	.	Alu	0.15
14	105046313	A->G	-	.	.	.	Intergenic	.	.	Alu	0.107143
14	105046339	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0740741
14	105046638	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0512821
14	105046688	A->G	-	.	.	.	Intergenic	.	.	Alu	0.173913
14	105046746	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0512821
14	105048909	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0491803
14	105048910	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0333333
14	105048928	A->G	-	.	.	.	Intergenic	.	.	Alu	0.03125
14	105048934	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0289855
14	105048950	A->G	-	.	.	.	Intergenic	.	.	Alu	0.0793651
14	105052488	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.230769
14	105052520	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.08
14	105052582	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.518519
14	105052711	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0769231
14	105052712	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0512821
14	105052722	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0789474
14	105052754	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0740741
14	105052785	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.333333
14	105052791	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.230769
14	105054504	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0714286
14	105055166	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.111111
14	105055167	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0638298
14	105055219	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.135135
14	105055244	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0327869
14	105055245	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0338983
14	105055251	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0566038
14	105055283	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0384615
14	105057785	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.105263
14	105057892	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.12
14	105058111	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0535714
14	105058184	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.395349
14	105058186	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0512821
14	105058213	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.09375
14	105058239	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0714286
14	105058304	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0454545
14	105058309	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0714286
14	105058320	A->G	-	ENSG00000183484	GPR132	protein_coding	Intergenic	.	.	Alu	0.0588235
14	105224361	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.416667
14	105224817	A->G	-	ENSG00000185024	BRF1	protein_coding	Intergenic	.	.	Alu	0.153846
15	101283444	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.1875
15	101283702	A->G	-	ENSG00000131876	SNRPA1	protein_coding	Intergenic	.	.	Alu	0.3
15	101643346	A->G	-	ENSG00000184277	TM2D3	protein_coding	Intergenic	.	.	Alu	0.181818
MT	1438	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
MT	750	A->G	+	ENSG00000211459	MT-RNR1	Mt_rRNA	Intron	.	.	Alu	1
X	131756684	A->G	-	ENSG00000213468	FIRRE	lincRNA	Intron	.	.	Alu	0.153846
X	153795859	A->G	+	ENSG00000180879	SSR4	protein_coding	Intron	.	.	Alu	0.533333
X	304577	A->G	-	ENSG00000178605	GTPBP6	protein_coding	Intron	.	.	Alu	0.16
X	3822442	A->G	-	ENSG00000205664	BX890604.1	lincRNA	Intron	.	.	Alu	0.26087
X	3865092	A->G	-	ENSG00000234449	FAM239A	lincRNA	Intron	.	.	Alu	0.285714
X	71292687	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.0714286
X	71292799	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.3
X	71292854	A->G	+	ENSG00000147140	NONO	protein_coding	Intron	.	.	Alu	0.09375
X	73947033	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0344828
X	73947034	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.0357143
X	73947216	A->G	+	ENSG00000225470	JPX	lincRNA	Intron	.	.	Alu	0.05
X	74201616	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.5
X	74201623	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.636364
X	74278755	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.4
X	74280130	A->G	-	ENSG00000230590	FTX	lincRNA	Intron	.	.	Alu	0.363636
4	780310	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.0869565
4	780327	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.16
4	780350	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.315789
4	780366	A->G	-	ENSG00000249592	AC139887.2	antisense	Intron	.	.	Alu	0.0952381
5	313712	A->G	+	ENSG00000249915	PDCD6	protein_coding	Intron	.	.	Alu	0.2
5	461701	A->G	+	ENSG00000180104	EXOC3	protein_coding	Intron	.	.	Alu	0.157895
18	739491	A->G	-	ENSG00000264635	AP001020.2	sense_intronic	Intron	.	.	Alu	0.25
18	739520	A->G	-	ENSG00000264635	AP001020.2	sense_intronic	Intron	.	.	Alu	0.2
1	1316188	A->G	+	ENSG00000127054	INTS11	protein_coding	Intron	.	.	Alu	0.166667
1	1317274	A->G	+	ENSG00000127054	INTS11	protein_coding	Intron	.	.	Alu	0.166667
1	1317300	A->G	+	ENSG00000127054	INTS11	protein_coding	Intron	.	.	Alu	0.2
1	1317340	A->G	+	ENSG00000127054	INTS11	protein_coding	Intron	.	.	Alu	0.181818
1	1483517	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.181818
1	1484320	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.153846
1	1484366	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.384615
1	1484393	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.428571
1	1484455	A->G	+	ENSG00000160072	ATAD3B	protein_coding	Intron	.	.	Alu	0.2
1	8877775	A->G	-	ENSG00000074800	ENO1	protein_coding	Intron	.	.	Alu	0.142857
1	8907733	A->G	-	ENSG00000232208	AL139415.1	processed_pseudogene	Intron	.	.	Alu	0.909091
3	9962420	A->G	-	ENSG00000269982	AC018809.2	antisense	Intron	.	.	Alu	0.181818
7	2238880	A->G	-	ENSG00000122687	MRM2	protein_coding	Intron	.	.	Alu	0.136364
11	6713976	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.757576
11	6713977	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.787879
11	6713978	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0606061
11	6713995	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.15625
11	6714003	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.36
11	6714041	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.375
11	6714047	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.6875
11	6714050	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.590909
11	6714100	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.0810811
11	6714112	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.575
11	6714129	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.282051
11	6714130	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.105263
11	6714143	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.25
11	6714155	A->G	-	ENSG00000254838	GVINP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.178571
12	6884712	A->G	+	ENSG00000248593	DSTNP2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.583333
12	6952303	A->G	+	ENSG00000111679	PTPN6	protein_coding	Intron	.	.	Alu	1
12	6953228	A->G	+	ENSG00000111679	PTPN6	protein_coding	Intron	.	.	Alu	1
12	7923199	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.0285714
12	7923267	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.263158
12	7929567	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.104167
12	7929589	A->G	-	ENSG00000059804	SLC2A3	protein_coding	Intron	.	.	Alu	0.0666667
12	8384294	A->G	-	ENSG00000226091	LINC00937	lincRNA	Intron	.	.	Alu	0.153846
12	8384301	A->G	-	ENSG00000226091	LINC00937	lincRNA	Intron	.	.	Alu	0.125
12	8384303	A->G	-	ENSG00000226091	LINC00937	lincRNA	Intron	.	.	Alu	0.125
12	8384360	A->G	-	ENSG00000226091	LINC00937	lincRNA	Intron	.	.	Alu	0.266667
12	8384361	A->G	-	ENSG00000226091	LINC00937	lincRNA	Intron	.	.	Alu	0.214286
12	9622355	A->G	+	ENSG00000284634	AC092821.3	processed_transcript	Intron	.	.	Alu	1
12	9658610	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.181818
12	9658626	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.16129
12	9659665	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.05
12	9659666	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.275
12	9659667	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.075
12	9659679	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.414634
12	9661660	A->G	+	ENSG00000257027	AC010186.3	sense_intronic	Intron	.	.	Alu	0.594595
16	1361179	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intron	.	.	Alu	0.181818
16	1361180	A->G	+	ENSG00000090581	GNPTG	protein_coding	Intron	.	.	Alu	0.181818
17	1578590	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intron	.	.	Alu	0.15
17	1578604	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intron	.	.	Alu	0.0952381
17	1585583	A->G	-	ENSG00000167703	SLC43A2	protein_coding	Intron	.	.	Alu	0.133333
17	2039136	A->G	+	ENSG00000108963	DPH1	protein_coding	Intron	.	.	Alu	0.7
17	2039335	A->G	+	ENSG00000108963	DPH1	protein_coding	Intron	.	.	Alu	0.181818
17	2039651	A->G	+	ENSG00000108963	DPH1	protein_coding	Intron	.	.	Alu	0.230769
17	4787583	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.166667
17	4787714	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.2
17	4787795	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.230769
17	4787796	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.285714
17	4787804	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.307692
17	4788290	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.08
17	4788292	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.12
17	4788375	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.210526
17	4788436	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.0540541
17	4788437	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.189189
17	4788438	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.27027
17	4788442	A->G	-	ENSG00000280254	AC233723.2	TEC	Intron	.	.	Alu	0.105263
19	4356915	A->G	-	ENSG00000008382	MPND	protein_coding	Intron	.	.	Alu	0.181818
19	5708824	A->G	-	ENSG00000196365	LONP1	protein_coding	Intron	.	.	Alu	0.166667
1	16624385	A->G	-	ENSG00000215908	CROCCP2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.7
1	23975231	A->G	-	ENSG00000188529	SRSF10	protein_coding	Intron	.	.	Alu	1
1	26285373	A->G	-	ENSG00000158062	UBXN11	protein_coding	Intron	.	.	Alu	0.115385
1	32781468	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.4
1	32781501	A->G	-	ENSG00000134684	YARS	protein_coding	Intron	.	.	Alu	0.5
1	44776867	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.0625
1	44777189	A->G	+	ENSG00000142937	RPS8	protein_coding	Intron	.	.	Alu	0.0666667
1	45610857	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.166667
1	45610970	A->G	+	ENSG00000132780	NASP	protein_coding	Intron	.	.	Alu	0.166667
1	45655924	A->G	-	ENSG00000159592	GPBP1L1	protein_coding	Intron	.	.	Alu	0.125
1	52669238	A->G	+	ENSG00000182183	SHISAL2A	protein_coding	Intron	.	.	Alu	0.166667
1	52669250	A->G	+	ENSG00000182183	SHISAL2A	protein_coding	Intron	.	.	Alu	0.363636
2	47163704	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intron	.	.	Alu	0.1
2	47163722	A->G	-	ENSG00000273269	AC073283.3	protein_coding	Intron	.	.	Alu	0.1
2	65011478	A->G	+	ENSG00000115902	SLC1A4	protein_coding	Intron	.	.	Alu	0.166667
2	65011542	A->G	+	ENSG00000115902	SLC1A4	protein_coding	Intron	.	.	Alu	0.25
2	86614556	A->G	-	ENSG00000228363	AC015971.1	antisense	Intron	.	.	Alu	0.153846
2	87477507	A->G	+	ENSG00000273445	AC133644.2	antisense	Intron	.	.	Alu	0.333333
3	12589928	A->G	-	ENSG00000132155	RAF1	protein_coding	Intron	.	.	Alu	0.454545
3	14944876	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0235294
3	14944889	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0204082
3	14944891	A->G	-	ENSG00000225733	FGD5-AS1	antisense	Intron	.	.	Alu	0.0505051
3	32716081	A->G	+	ENSG00000182973	CNOT10	protein_coding	Intron	.	.	Alu	0.153846
3	39408835	A->G	+	ENSG00000168028	RPSA	protein_coding	Intron	.	.	Alu	0.166667
3	39408843	A->G	+	ENSG00000168028	RPSA	protein_coding	Intron	.	.	Alu	0.416667
3	49318634	A->G	-	ENSG00000114316	USP4	protein_coding	Intron	.	.	Alu	0.2
3	49373325	A->G	-	ENSG00000067560	RHOA	protein_coding	Intron	.	.	Alu	0.2
3	50112949	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.130435
3	50112955	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0952381
3	50113054	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.2
3	50113116	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.0625
3	50113122	A->G	+	ENSG00000003756	RBM5	protein_coding	Intron	.	.	Alu	0.108108
4	55416093	A->G	+	ENSG00000134851	TMEM165	protein_coding	Intron	.	.	Alu	0.235294
4	82356707	A->G	-	ENSG00000138668	HNRNPD	protein_coding	Intron	.	.	Alu	0.2
4	82895247	A->G	-	ENSG00000251022	THAP9-AS1	antisense	Intron	.	.	Alu	0.05
4	98026084	A->G	+	ENSG00000242697	RPL5P12	processed_pseudogene	Intron	.	.	Alu	1
5	16616264	A->G	-	ENSG00000246214	AC022113.1	antisense	Intron	.	.	Alu	1
5	34175891	A->G	-	ENSG00000215158	AC138409.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.1875
5	44816468	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.111111
5	44816469	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.166667
5	44816481	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.25
5	44818079	A->G	+	ENSG00000112996	MRPS30	protein_coding	Intron	.	.	Alu	0.421053
5	70479075	A->G	+	ENSG00000250687	AC146944.2	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.153846
5	91313683	A->G	-	ENSG00000271762	AC123595.2	lincRNA	Intron	.	.	Alu	0.0338983
6	28977560	A->G	+	ENSG00000263426	RN7SL471P	misc_RNA	Intron	.	.	Alu	0.235294
6	29889346	A->G	+	ENSG00000206341	HLA-H	unprocessed_pseudogene	Intron	.	.	Alu	0.517241
6	42882035	A->G	+	ENSG00000146223	RPL7L1	protein_coding	Intron	.	.	Alu	0.2
6	42941524	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.2
6	42941586	A->G	+	ENSG00000231113	AL035587.1	antisense	Intron	.	.	Alu	0.111111
7	48106411	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.0769231
7	48106491	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.0638298
7	48106494	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.2
7	48106508	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.08
7	48106550	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.0348837
7	48106573	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.208791
7	48106586	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.114286
7	48106588	A->G	+	ENSG00000183696	UPP1	protein_coding	Intron	.	.	Alu	0.03
7	65752255	A->G	+	ENSG00000228409	CCT6P1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.125
7	72829753	A->G	+	ENSG00000225648	SBDSP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.413793
7	72999529	A->G	-	ENSG00000174353	STAG3L3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.5
7	74894220	A->G	+	ENSG00000123965	PMS2P5	unprocessed_pseudogene	Intron	.	.	Alu	0.4
7	84939766	A->G	-	ENSG00000280325	AC074183.2	TEC	Intron	.	.	Alu	1
7	87186335	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.137931
7	87186340	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.269231
7	87186341	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.0833333
7	87186355	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.0882353
7	87186449	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.117647
7	87186454	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.35
7	87186471	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.136364
7	87186496	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.1
7	87186523	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.0555556
7	87187256	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.2
7	87187348	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.0606061
7	87187352	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.354839
7	87187418	A->G	+	ENSG00000135164	DMTF1	protein_coding	Intron	.	.	Alu	0.0833333
7	92092700	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.230769
7	92092708	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.153846
7	92092716	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.307692
7	92092747	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.166667
7	92092759	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.272727
7	92092764	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.181818
7	92092903	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.333333
7	92092913	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.230769
7	92092925	A->G	+	ENSG00000127914	AKAP9	protein_coding	Intron	.	.	Alu	0.230769
8	23189310	A->G	-	ENSG00000253930	TNFRSF10A-AS1	antisense	Intron	.	.	Alu	0.0882353
8	98043921	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.181818
8	98043950	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.181818
8	98043978	A->G	-	ENSG00000156482	RPL30	protein_coding	Intron	.	.	Alu	0.230769
9	19125674	A->G	-	ENSG00000147872	PLIN2	protein_coding	Intron	.	.	Alu	0.0645161
9	33036153	A->G	+	ENSG00000086061	DNAJA1	protein_coding	Intron	.	.	Alu	0.142857
9	40992722	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.161765
9	41008967	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.446154
9	41011651	A->G	+	ENSG00000276291	FRG1HP	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.245614
9	62809968	A->G	+	ENSG00000238113	LINC01410	lincRNA	Intron	.	.	Alu	1
9	92841668	A->G	-	ENSG00000275318	AL136981.2	unprocessed_pseudogene	Intron	.	.	Alu	0.0909091
10	42517873	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.3125
10	42517897	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.230769
10	42518028	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.230769
10	42518049	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.7
10	42518072	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.7
10	42518688	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.375
10	42518700	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.153846
10	42518701	A->G	-	ENSG00000234420	ZNF37BP	transcribed_processed_pseudogene	Intron	.	.	Alu	0.307692
10	68517940	A->G	-	ENSG00000122912	SLC25A16	protein_coding	Intron	.	.	Alu	0.181818
10	68759390	A->G	+	ENSG00000221184	MIR1254-1	miRNA	Intron	.	.	Alu	0.416667
10	69098527	A->G	+	ENSG00000274008	RF00017	misc_RNA	Intron	.	.	Alu	0.0571429
10	73499657	A->G	+	ENSG00000221817	PPP3CB-AS1	processed_transcript	Intron	.	.	Alu	0.181818
11	62887934	A->G	+	ENSG00000168003	SLC3A2	protein_coding	Intron	.	.	Alu	0.153846
11	65180158	A->G	-	ENSG00000254614	AP003068.2	antisense	Intron	.	.	Alu	0.181818
11	65440056	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0471698
11	65441344	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0517241
11	65441417	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.025974
11	65442619	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.586207
11	65442626	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0224719
11	65442627	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0930233
11	65442662	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0490196
11	65442670	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.0833333
11	65442701	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.178218
11	65442702	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.040404
11	65442703	A->G	+	ENSG00000245532	NEAT1	lincRNA	Intron	.	.	Alu	0.11
11	90212072	A->G	-	ENSG00000110172	CHORDC1	protein_coding	Intron	.	.	Alu	0.0689655
11	90212894	A->G	-	ENSG00000110172	CHORDC1	protein_coding	Intron	.	.	Alu	0.111111
11	90212902	A->G	-	ENSG00000110172	CHORDC1	protein_coding	Intron	.	.	Alu	0.142857
11	93733708	A->G	-	ENSG00000284458	MIR1304	miRNA	Intron	.	.	Alu	0.35
11	93733750	A->G	-	ENSG00000284458	MIR1304	miRNA	Intron	.	.	Alu	0.1
11	93733755	A->G	-	ENSG00000284458	MIR1304	miRNA	Intron	.	.	Alu	0.333333
11	93734940	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0444444
11	93734983	A->G	-	ENSG00000166012	TAF1D	protein_coding	Intron	.	.	Alu	0.0377358
11	93806159	A->G	+	ENSG00000284057	AP001273.2	protein_coding	Intron	.	.	Alu	0.357143
12	47208921	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intron	.	.	Alu	0.2
12	47209309	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intron	.	.	Alu	0.0509804
12	47209403	A->G	-	ENSG00000247774	PCED1B-AS1	processed_transcript	Intron	.	.	Alu	0.0693069
12	53296589	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.0769231
12	53296592	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.333333
12	53296612	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.464286
12	53296676	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.0769231
12	53297151	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.0909091
12	53297204	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.225806
12	53297226	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.115385
12	53297273	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.26087
12	53297276	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.173913
12	53297277	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.0869565
12	53297278	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.26087
12	53297298	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.296296
12	53297350	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.0666667
12	53297355	A->G	+	ENSG00000123349	PFDN5	protein_coding	Intron	.	.	Alu	0.133333
12	55943369	A->G	+	ENSG00000065357	DGKA	protein_coding	Intron	.	.	Alu	0.307692
12	55943376	A->G	+	ENSG00000065357	DGKA	protein_coding	Intron	.	.	Alu	0.166667
12	56312710	A->G	-	ENSG00000144785	AC073896.1	protein_coding	Intron	.	.	Alu	0.181818
12	68649120	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.333333
12	68649248	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.235294
12	68649929	A->G	+	ENSG00000127314	RAP1B	protein_coding	Intron	.	.	Alu	0.2
12	70322135	A->G	+	ENSG00000279530	AC092881.1	TEC	Intron	.	.	Alu	0.235294
12	70322296	A->G	+	ENSG00000279530	AC092881.1	TEC	Intron	.	.	Alu	0.117647
12	98454126	A->G	-	ENSG00000227825	SLC9A7P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.142857
12	98454131	A->G	-	ENSG00000227825	SLC9A7P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.130435
12	98454132	A->G	-	ENSG00000227825	SLC9A7P1	transcribed_processed_pseudogene	Intron	.	.	Alu	0.318182
12	98597590	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.0333333
12	98597686	A->G	+	ENSG00000075415	SLC25A3	protein_coding	Intron	.	.	Alu	0.0263158
13	32524798	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.0909091
13	32524825	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.441176
13	32524839	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.0689655
13	32524847	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.263158
13	32524860	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.277778
13	32524891	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.404762
13	32524901	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.05
13	32524932	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.0487805
13	32524983	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.0789474
13	32525013	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.259259
13	32525553	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.243902
13	32525556	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.0789474
13	32525569	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	Intron	.	.	Alu	0.142857
13	40912631	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
13	40912633	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.5
13	40912645	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.363636
13	40912668	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.2
13	40912691	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.75
13	40912700	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.307692
13	40912708	A->G	-	ENSG00000168852	TPTE2P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.333333
13	52194266	A->G	-	ENSG00000243406	MRPS31P5	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.6
14	20450106	A->G	-	ENSG00000092094	OSGEP	protein_coding	Intron	.	.	Alu	0.2
14	20451341	A->G	-	ENSG00000258515	AL355075.2	antisense	Intron	.	.	Alu	0.0465116
14	20451389	A->G	-	ENSG00000258515	AL355075.2	antisense	Intron	.	.	Alu	0.25
14	20451399	A->G	-	ENSG00000258515	AL355075.2	antisense	Intron	.	.	Alu	0.291667
14	55060382	A->G	+	ENSG00000168175	MAPK1IP1L	protein_coding	Intron	.	.	Alu	0.4
14	58293823	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0547945
14	58293880	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0930233
14	58293922	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.109091
14	58294014	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.162162
14	58294015	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.228571
14	58295701	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.037037
14	58295723	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.101449
14	58295789	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0227273
14	58295790	A->G	-	ENSG00000257621	PSMA3-AS1	antisense	Intron	.	.	Alu	0.0229885
14	73916749	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intron	.	.	Alu	0.6
14	73916754	A->G	+	ENSG00000258653	AC005520.1	protein_coding	Intron	.	.	Alu	0.25
15	22672802	A->G	+	ENSG00000276141	WHAMMP3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.709091
15	22681586	A->G	+	ENSG00000276141	WHAMMP3	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.310345
15	24982618	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.68
15	24982621	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.28
15	24982669	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.571429
15	24982690	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.142857
15	24982691	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.428571
15	24982707	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.2
15	24982719	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.176471
15	24982729	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.611111
15	24982792	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.388889
15	24982795	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.315789
15	24982806	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.105263
15	24983245	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.384615
15	24983271	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.181818
15	24983272	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.636364
15	24983278	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.3
15	24983298	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.2
15	24983514	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.2
15	24985444	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.16
15	24985466	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.166667
15	24985469	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.16
15	24985588	A->G	+	ENSG00000214265	AC124312.1	protein_coding	Intron	.	.	Alu	0.0869565
15	25357516	A->G	-	ENSG00000114062	UBE3A	protein_coding	Intron	.	.	Alu	0.333333
15	30488286	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.363636
15	30488295	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.181818
15	30489324	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.15
15	30489408	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.1
15	30489454	A->G	+	ENSG00000270055	AC127502.2	sense_intronic	Intron	.	.	Alu	0.1
15	41298744	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0266667
15	41298845	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.030303
15	41298877	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0344828
15	41301132	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.046875
15	41301151	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.03125
15	41301180	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0338983
15	41302449	A->G	+	ENSG00000247556	OIP5-AS1	processed_transcript	Intron	.	.	Alu	0.0338983
15	50363599	A->G	+	ENSG00000244879	GABPB1-AS1	antisense	Intron	.	.	Alu	0.2
15	74026288	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.272727
15	74026431	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.2
15	74026432	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.3
15	74026915	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.2
15	74026927	A->G	+	ENSG00000140464	PML	protein_coding	Intron	.	.	Alu	0.2
15	75352969	A->G	+	ENSG00000140398	NEIL1	protein_coding	Intron	.	.	Alu	0.153846
15	75353355	A->G	+	ENSG00000140398	NEIL1	protein_coding	Intron	.	.	Alu	0.615385
15	75353361	A->G	+	ENSG00000140398	NEIL1	protein_coding	Intron	.	.	Alu	0.416667
15	78890672	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.0857143
15	78890762	A->G	+	ENSG00000185787	MORF4L1	protein_coding	Intron	.	.	Alu	0.0666667
15	85702167	A->G	+	ENSG00000259453	AC087286.4	sense_intronic	Intron	.	.	Alu	0.2
15	89094224	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intron	.	.	Alu	0.125
15	89094225	A->G	+	ENSG00000140526	ABHD2	protein_coding	Intron	.	.	Alu	0.235294
15	90076554	A->G	+	ENSG00000259291	ZNF710-AS1	antisense	Intron	.	.	Alu	0.166667
15	90076555	A->G	+	ENSG00000259291	ZNF710-AS1	antisense	Intron	.	.	Alu	0.181818
16	11881810	A->G	-	ENSG00000261560	AC007216.3	sense_intronic	Intron	.	.	Alu	0.575758
16	11881826	A->G	-	ENSG00000261560	AC007216.3	sense_intronic	Intron	.	.	Alu	0.09375
16	11881829	A->G	-	ENSG00000261560	AC007216.3	sense_intronic	Intron	.	.	Alu	0.0666667
16	11881870	A->G	-	ENSG00000261560	AC007216.3	sense_intronic	Intron	.	.	Alu	0.08
16	11882157	A->G	-	ENSG00000261560	AC007216.3	sense_intronic	Intron	.	.	Alu	0.4
16	21520173	A->G	-	ENSG00000258186	SLC7A5P2	transcribed_processed_pseudogene	Intron	.	.	Alu	0.516129
16	22328854	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.266667
16	22329032	A->G	+	ENSG00000058600	POLR3E	protein_coding	Intron	.	.	Alu	0.2
16	23495547	A->G	-	ENSG00000103365	GGA2	protein_coding	Intron	.	.	Alu	0.0666667
16	28956653	A->G	+	ENSG00000176953	NFATC2IP	protein_coding	Intron	.	.	Alu	0.5
16	28988913	A->G	+	ENSG00000213658	LAT	protein_coding	Intron	.	.	Alu	0.3
16	29834400	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.525424
16	29834402	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.5
16	29834412	A->G	+	ENSG00000013364	MVP	protein_coding	Intron	.	.	Alu	0.0322581
16	30380276	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.142857
16	30380399	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.235294
16	30380404	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.3125
16	30380426	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.6875
16	30380430	A->G	-	ENSG00000180035	ZNF48	protein_coding	Intron	.	.	Alu	0.5
16	31062536	A->G	-	ENSG00000232748	AC135050.1	lincRNA	Intron	.	.	Alu	0.166667
16	31062538	A->G	-	ENSG00000232748	AC135050.1	lincRNA	Intron	.	.	Alu	0.0714286
16	31062575	A->G	-	ENSG00000232748	AC135050.1	lincRNA	Intron	.	.	Alu	0.185185
16	31062664	A->G	-	ENSG00000232748	AC135050.1	lincRNA	Intron	.	.	Alu	0.1875
16	31122518	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.484848
16	31122598	A->G	+	ENSG00000278133	AC135050.6	sense_intronic	Intron	.	.	Alu	0.6
16	71743503	A->G	-	ENSG00000166747	AP1G1	protein_coding	Intron	.	.	Alu	0.181818
16	87396876	A->G	+	ENSG00000261592	AC010531.3	antisense	Intron	.	.	Alu	0.105263
16	88625952	A->G	+	ENSG00000158545	ZC3H18	protein_coding	Intron	.	.	Alu	0.230769
16	88627187	A->G	+	ENSG00000158545	ZC3H18	protein_coding	Intron	.	.	Alu	0.1875
16	88627253	A->G	+	ENSG00000158545	ZC3H18	protein_coding	Intron	.	.	Alu	0.25
16	88627363	A->G	+	ENSG00000158545	ZC3H18	protein_coding	Intron	.	.	Alu	0.2
16	88717873	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.117647
16	88718000	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.142857
16	88718007	A->G	-	ENSG00000103335	PIEZO1	protein_coding	Intron	.	.	Alu	0.4
16	88718644	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.230769
16	88718781	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.3
16	88718836	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.2
16	88718852	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.2
16	88719124	A->G	-	ENSG00000260121	AC138028.4	antisense	Intron	.	.	Alu	0.130435
16	89517676	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.384615
16	89517700	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.153846
16	89517701	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.214286
16	89517720	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.133333
16	89517723	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.333333
16	89517750	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.363636
16	89517801	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.3
16	89520538	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.454545
16	89520580	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.2
16	89531594	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.3
16	89531609	A->G	+	ENSG00000197912	SPG7	protein_coding	Intron	.	.	Alu	0.307692
16	89874833	A->G	+	ENSG00000141002	TCF25	protein_coding	Intron	.	.	Alu	0.2
17	18306639	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intron	.	.	Alu	0.25
17	18306657	A->G	-	ENSG00000177302	TOP3A	protein_coding	Intron	.	.	Alu	0.5
17	27297224	A->G	+	ENSG00000109046	WSB1	protein_coding	Intron	.	.	Alu	0.125
17	27297266	A->G	+	ENSG00000109046	WSB1	protein_coding	Intron	.	.	Alu	0.222222
17	28672676	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intron	.	.	Alu	0.2
17	28672744	A->G	+	ENSG00000109111	SUPT6H	protein_coding	Intron	.	.	Alu	0.625
17	41851359	A->G	-	ENSG00000259623	AC125257.1	sense_overlapping	Intron	.	.	Alu	0.0444444
17	41851397	A->G	-	ENSG00000259623	AC125257.1	sense_overlapping	Intron	.	.	Alu	0.0769231
17	47673795	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intron	.	.	Alu	0.636364
17	47673803	A->G	+	ENSG00000108424	KPNB1	protein_coding	Intron	.	.	Alu	0.272727
17	48935923	A->G	-	ENSG00000230532	AC091133.1	antisense	Intron	.	.	Alu	0.384615
17	58476736	A->G	-	ENSG00000266648	SETP3	processed_pseudogene	Intron	.	.	Alu	1
17	68115091	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.333333
17	68115153	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.111111
17	68115175	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
17	68115181	A->G	+	ENSG00000237854	LINC00674	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.166667
17	68274283	A->G	-	ENSG00000141337	ARSG	protein_coding	Intron	.	.	Alu	0.2
17	74205757	A->G	+	ENSG00000172809	RPL38	protein_coding	Intron	.	.	Alu	0.0952381
17	76559291	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.214286
17	76559334	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.133333
17	76559399	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.3125
17	76559811	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.0789474
17	76559825	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.0555556
17	76559866	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.238095
17	76559867	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.190476
17	76559893	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.153846
17	76559929	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.142857
17	76559963	A->G	+	ENSG00000163597	SNHG16	processed_transcript	Intron	.	.	Alu	0.173913
17	78108925	A->G	-	ENSG00000204282	TNRC6C-AS1	processed_transcript	Intron	.	.	Alu	0.0833333
17	78109895	A->G	-	ENSG00000204282	TNRC6C-AS1	processed_transcript	Intron	.	.	Alu	0.111111
17	78109901	A->G	-	ENSG00000204282	TNRC6C-AS1	processed_transcript	Intron	.	.	Alu	0.128205
17	78109904	A->G	-	ENSG00000204282	TNRC6C-AS1	processed_transcript	Intron	.	.	Alu	0.047619
17	78109966	A->G	-	ENSG00000204282	TNRC6C-AS1	processed_transcript	Intron	.	.	Alu	0.0666667
17	78109983	A->G	-	ENSG00000204282	TNRC6C-AS1	processed_transcript	Intron	.	.	Alu	0.0882353
17	81855961	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.15
17	81855976	A->G	-	ENSG00000185624	P4HB	protein_coding	Intron	.	.	Alu	0.0909091
17	82482722	A->G	+	ENSG00000266236	NARF-IT1	sense_intronic	Intron	.	.	Alu	0.142857
18	11905207	A->G	-	ENSG00000154889	MPPE1	protein_coding	Intron	.	.	Alu	0.3
18	35307993	A->G	+	ENSG00000257267	ZNF271P	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.1
18	49390725	A->G	-	ENSG00000141627	DYM	protein_coding	Intron	.	.	Alu	0.153846
18	49390780	A->G	-	ENSG00000141627	DYM	protein_coding	Intron	.	.	Alu	0.3
18	63396345	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.25
18	63396350	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.3
18	63396767	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.142857
18	63396946	A->G	-	ENSG00000119541	VPS4B	protein_coding	Intron	.	.	Alu	0.2
19	10282317	A->G	+	ENSG00000266978	AC011511.2	antisense	Intron	.	.	Alu	0.2
19	10283136	A->G	+	ENSG00000266978	AC011511.2	antisense	Intron	.	.	Alu	0.105263
19	10351474	A->G	-	ENSG00000105397	TYK2	protein_coding	Intron	.	.	Alu	0.214286
19	10932233	A->G	+	ENSG00000142444	TIMM29	protein_coding	Intron	.	.	Alu	0.214286
19	13836464	A->G	-	ENSG00000207808	MIR27A	miRNA	Intron	.	.	Alu	0.0769231
19	13836514	A->G	-	ENSG00000207808	MIR27A	miRNA	Intron	.	.	Alu	0.147059
19	16079839	A->G	+	ENSG00000167460	TPM4	protein_coding	Intron	.	.	Alu	0.0425532
19	16565614	A->G	-	ENSG00000269085	AC008764.5	antisense	Intron	.	.	Alu	0.157895
19	16565662	A->G	-	ENSG00000269085	AC008764.5	antisense	Intron	.	.	Alu	0.24
19	16565910	A->G	-	ENSG00000269085	AC008764.5	antisense	Intron	.	.	Alu	0.142857
19	16565967	A->G	-	ENSG00000269085	AC008764.5	antisense	Intron	.	.	Alu	0.266667
19	16566112	A->G	-	ENSG00000269085	AC008764.5	antisense	Intron	.	.	Alu	0.125
19	16640015	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.142857
19	16640017	A->G	-	ENSG00000269427	AC024075.3	antisense	Intron	.	.	Alu	0.153846
19	17177563	A->G	+	ENSG00000269836	AC020913.3	antisense	Intron	.	.	Alu	0.2
19	18910571	A->G	-	ENSG00000105669	COPE	protein_coding	Intron	.	.	Alu	0.153846
19	19796049	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.416667
19	19796065	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.461538
19	19796154	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.153846
19	19796198	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.3
19	19820506	A->G	-	ENSG00000267581	AC011477.4	lincRNA	Intron	.	.	Alu	0.307692
19	24064590	A->G	+	ENSG00000268362	AC092279.1	lincRNA	Intron	.	.	Alu	0.363636
19	24064620	A->G	+	ENSG00000268362	AC092279.1	lincRNA	Intron	.	.	Alu	0.272727
19	24064626	A->G	+	ENSG00000268362	AC092279.1	lincRNA	Intron	.	.	Alu	0.153846
19	24064630	A->G	+	ENSG00000268362	AC092279.1	lincRNA	Intron	.	.	Alu	0.142857
19	35275116	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.0909091
19	35275208	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.166667
19	35275212	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.0952381
19	35275281	A->G	+	ENSG00000105698	USF2	protein_coding	Intron	.	.	Alu	0.238095
19	38845253	A->G	-	ENSG00000269688	AC008982.2	sense_intronic	Intron	.	.	Alu	0.0487805
19	39979496	A->G	+	ENSG00000013275	PSMC4	protein_coding	Intron	.	.	Alu	0.2
19	41551339	A->G	+	ENSG00000268027	AC243960.1	lincRNA	Intron	.	.	Alu	0.1
19	48256571	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.0769231
19	48257643	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.1
19	48257739	A->G	+	ENSG00000268001	CARD8-AS1	antisense	Intron	.	.	Alu	0.176471
19	52651811	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.2
19	52652176	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.352941
19	52652182	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.117647
19	52652194	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.333333
19	52652195	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.357143
19	52652196	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.142857
19	52652217	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.125
19	52652232	A->G	-	ENSG00000269825	AC022150.4	sense_intronic	Intron	.	.	Alu	0.2
19	54309220	A->G	-	ENSG00000187116	LILRA5	protein_coding	Intron	.	.	Alu	0.153846
19	54311229	A->G	-	ENSG00000187116	LILRA5	protein_coding	Intron	.	.	Alu	0.0666667
19	57304476	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.12
19	57304491	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.0740741
19	57304529	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.1
19	57304883	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.08
19	57304893	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.217391
19	57304897	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.0909091
19	57304919	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.761905
19	57304929	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.352941
19	57304981	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.15
19	57305556	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.470588
19	57305637	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.346154
19	57305645	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.115385
19	57305648	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.384615
19	57305685	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.136364
19	57305736	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.0769231
19	57307409	A->G	+	ENSG00000268205	AC005261.1	lincRNA	Intron	.	.	Alu	0.133333
19	57853856	A->G	+	ENSG00000268750	AC010522.1	protein_coding	Intron	.	.	Alu	0.181818
20	21166219	A->G	-	ENSG00000214535	RPS15AP1	processed_pseudogene	Intron	.	.	Alu	1
20	31548574	A->G	+	ENSG00000101294	HM13	protein_coding	Intron	.	.	Alu	0.214286
20	35713264	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.0208333
20	35713265	A->G	-	ENSG00000131051	RBM39	protein_coding	Intron	.	.	Alu	0.0206186
20	45422651	A->G	+	ENSG00000124155	PIGT	protein_coding	Intron	.	.	Alu	0.1875
20	45422945	A->G	+	ENSG00000124155	PIGT	protein_coding	Intron	.	.	Alu	0.111111
20	45422951	A->G	+	ENSG00000124155	PIGT	protein_coding	Intron	.	.	Alu	0.0952381
20	45422952	A->G	+	ENSG00000124155	PIGT	protein_coding	Intron	.	.	Alu	0.0952381
20	45423398	A->G	+	ENSG00000124155	PIGT	protein_coding	Intron	.	.	Alu	0.166667
20	45423420	A->G	+	ENSG00000124155	PIGT	protein_coding	Intron	.	.	Alu	0.384615
20	45423462	A->G	+	ENSG00000124155	PIGT	protein_coding	Intron	.	.	Alu	0.142857
20	49943991	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.214286
20	49944138	A->G	+	ENSG00000124226	RNF114	protein_coding	Intron	.	.	Alu	0.0909091
20	57617639	A->G	-	ENSG00000124256	ZBP1	protein_coding	Intron	.	.	Alu	0.230769
21	41427937	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.5
21	41427975	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.269231
21	41427980	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.37037
21	41428035	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.325
21	41428045	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.30303
21	41428051	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.25641
21	41428053	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.0526316
21	41428078	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.0434783
21	41428106	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.0576923
21	41429734	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.05
21	41429797	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.2
21	41429857	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.461538
21	41429858	A->G	+	ENSG00000157601	MX1	protein_coding	Intron	.	.	Alu	0.230769
22	17740892	A->G	-	ENSG00000015475	BID	protein_coding	Intron	.	.	Alu	0.454545
22	37871218	A->G	+	ENSG00000100129	EIF3L	protein_coding	Intron	.	.	Alu	0.0869565
22	38953404	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intron	.	.	Alu	0.48
22	38953407	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intron	.	.	Alu	0.375
22	38953410	A->G	+	ENSG00000128383	APOBEC3A	protein_coding	Intron	.	.	Alu	0.217391
22	39079340	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.421053
22	39079348	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.217391
22	39079392	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.0769231
22	39079394	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.275862
22	39079398	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.0666667
22	39079418	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.0740741
22	39079422	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.107143
22	39079444	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.173913
22	39079447	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.625
22	39079457	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.625
22	39079467	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.235294
22	39079503	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.111111
22	39079520	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.1
22	39079525	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.526316
22	39079532	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.142857
22	39079557	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.529412
22	39079566	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.5
22	39079779	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.0833333
22	39079801	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.296296
22	39079810	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.285714
22	39079815	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.111111
22	39079821	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.111111
22	39079857	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.217391
22	39079858	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.428571
22	39079913	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.25
22	39079923	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.518519
22	39079924	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.321429
22	39079933	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.115385
22	39079950	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.162162
22	39079985	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.111111
22	39079989	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.0555556
22	39079993	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.555556
22	39079994	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.297297
22	39080001	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.166667
22	39080034	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.0689655
22	39080040	A->G	+	ENSG00000239713	APOBEC3G	protein_coding	Intron	.	.	Alu	0.172414
22	49817389	A->G	-	ENSG00000236867	Z98885.1	processed_pseudogene	Intron	.	.	Alu	0.526316
1	112699116	A->G	+	ENSG00000155363	MOV10	protein_coding	Intron	.	.	Alu	0.545455
1	112699117	A->G	+	ENSG00000155363	MOV10	protein_coding	Intron	.	.	Alu	0.363636
1	120440796	A->G	+	ENSG00000270231	NBPF8	unprocessed_pseudogene	Intron	.	.	Alu	0.538462
1	121571348	A->G	+	ENSG00000231752	EMBP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.611111
1	155674763	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.153846
1	155674774	A->G	-	ENSG00000163374	YY1AP1	protein_coding	Intron	.	.	Alu	0.230769
1	161595915	A->G	+	ENSG00000273112	AL590385.2	processed_transcript	Intron	.	.	Alu	0.56
1	167459774	A->G	-	ENSG00000273160	AL359962.2	lincRNA	Intron	.	.	Alu	0.4375
1	201001580	A->G	-	ENSG00000116852	KIF21B	protein_coding	Intron	.	.	Alu	0.7
1	202150106	A->G	-	ENSG00000143851	PTPN7	protein_coding	Intron	.	.	Alu	0.0740741
1	207768991	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.384615
1	207768998	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.333333
1	207769004	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.166667
1	207769980	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.454545
1	207770042	A->G	+	ENSG00000117335	CD46	protein_coding	Intron	.	.	Alu	0.2
1	212613924	A->G	+	ENSG00000162772	ATF3	protein_coding	Intron	.	.	Alu	0.25
1	224413126	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.125
1	224413127	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.08
1	224413185	A->G	-	ENSG00000162923	WDR26	protein_coding	Intron	.	.	Alu	0.307692
1	229450793	A->G	-	ENSG00000069248	NUP133	protein_coding	Intron	.	.	Alu	0.3
2	113831359	A->G	-	ENSG00000228857	AC104653.1	lincRNA	Intron	.	.	Alu	0.272727
2	178433678	A->G	+	ENSG00000223960	AC009948.1	antisense	Intron	.	.	Alu	0.190476
2	178433740	A->G	+	ENSG00000223960	AC009948.1	antisense	Intron	.	.	Alu	0.130435
2	178445816	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.125
2	178445823	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.307692
2	178445868	A->G	-	ENSG00000180228	PRKRA	protein_coding	Intron	.	.	Alu	0.315789
2	191076053	A->G	-	ENSG00000138378	STAT4	protein_coding	Intron	.	.	Alu	0.1
2	191076121	A->G	-	ENSG00000138378	STAT4	protein_coding	Intron	.	.	Alu	0.192308
2	196151382	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.125
2	196154182	A->G	-	ENSG00000272211	AC114760.2	antisense	Intron	.	.	Alu	0.173913
2	197496904	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intron	.	.	Alu	0.2
2	197496910	A->G	-	ENSG00000144381	HSPD1	protein_coding	Intron	.	.	Alu	0.4
2	218233232	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.176471
2	218233246	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.142857
2	218233259	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.125
2	218233278	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.142857
2	218233298	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.416667
2	218233303	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.25
2	218235275	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0361446
2	218235276	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0987654
2	218235279	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0921053
2	218235293	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.293333
2	218235334	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0338983
2	218235364	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.103896
2	218235420	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0434783
2	218235426	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.26087
2	218235437	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0833333
2	218235450	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0704225
2	218235826	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0980392
2	218235832	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.06
2	218235855	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.340426
2	218235856	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.276596
2	218235861	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0588235
2	218235874	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0392157
2	218235943	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.325
2	218235970	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0769231
2	218235983	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.425
2	218235993	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0625
2	218235996	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0416667
2	218236002	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0408163
2	218236011	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.05
2	218236022	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.128205
2	218236050	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.047619
2	218236065	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.191489
2	218236078	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0363636
2	218236543	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0412371
2	218236559	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.025974
2	218236573	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0416667
2	218236591	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0357143
2	218236603	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0576923
2	218236607	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0377358
2	218236609	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0384615
2	218236617	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.114286
2	218236628	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.075
2	218236645	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.15625
2	218236671	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0555556
2	218236672	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.142857
2	218236677	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0571429
2	218236685	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.368421
2	218236698	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0952381
2	218236713	A->G	+	ENSG00000163466	ARPC2	protein_coding	Intron	.	.	Alu	0.0454545
2	218366220	A->G	-	ENSG00000158428	CATIP	protein_coding	Intron	.	.	Alu	0.133333
2	218385488	A->G	+	ENSG00000018280	SLC11A1	protein_coding	Intron	.	.	Alu	0.0350877
2	218385491	A->G	+	ENSG00000018280	SLC11A1	protein_coding	Intron	.	.	Alu	0.0689655
2	218398898	A->G	+	ENSG00000273361	AC021016.3	antisense	Intron	.	.	Alu	0.585366
2	218399011	A->G	+	ENSG00000273361	AC021016.3	antisense	Intron	.	.	Alu	0.235294
2	230167362	A->G	-	ENSG00000135899	SP110	protein_coding	Intron	.	.	Alu	0.25
2	230167982	A->G	-	ENSG00000135899	SP110	protein_coding	Intron	.	.	Alu	0.15
2	230167998	A->G	-	ENSG00000135899	SP110	protein_coding	Intron	.	.	Alu	0.117647
2	230168009	A->G	-	ENSG00000135899	SP110	protein_coding	Intron	.	.	Alu	0.363636
3	183522876	A->G	-	ENSG00000172578	KLHL6	protein_coding	Intron	.	.	Alu	0.25
3	183522894	A->G	-	ENSG00000172578	KLHL6	protein_coding	Intron	.	.	Alu	0.166667
3	183522898	A->G	-	ENSG00000172578	KLHL6	protein_coding	Intron	.	.	Alu	0.230769
3	184138862	A->G	+	ENSG00000145191	EIF2B5	protein_coding	Intron	.	.	Alu	0.230769
3	195963345	A->G	-	ENSG00000185485	SDHAP1	transcribed_unprocessed_pseudogene	Intron	.	.	Alu	0.217391
3	196400493	A->G	-	ENSG00000163960	UBXN7	protein_coding	Intron	.	.	Alu	0.166667
3	196904999	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.0952381
3	196905000	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.1
3	196905029	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.0869565
3	196905039	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.181818
3	196905081	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.125
3	196905083	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.25
3	196905180	A->G	+	ENSG00000119231	SENP5	protein_coding	Intron	.	.	Alu	0.117647
4	102811619	A->G	-	ENSG00000109332	UBE2D3	protein_coding	Intron	.	.	Alu	0.125
4	108623182	A->G	+	ENSG00000109475	RPL34	protein_coding	Intron	.	.	Alu	0.166667
4	127943479	A->G	-	ENSG00000164073	MFSD8	protein_coding	Intron	.	.	Alu	0.2
4	151103269	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.219512
4	151103354	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0350877
4	151103371	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0357143
4	151103669	A->G	+	ENSG00000145425	RPS3A	protein_coding	Intron	.	.	Alu	0.0263158
5	115838956	A->G	-	ENSG00000145782	ATG12	protein_coding	Intron	.	.	Alu	0.285714
5	132472683	A->G	+	ENSG00000234290	AC116366.1	antisense	Intron	.	.	Alu	0.6
5	142143837	A->G	+	ENSG00000131507	NDFIP1	protein_coding	Intron	.	.	Alu	0.0606061
5	170081168	A->G	+	ENSG00000134516	DOCK2	protein_coding	Intron	.	.	Alu	1
5	180835080	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.714286
5	180835372	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.521739
5	180835373	A->G	+	ENSG00000245060	LINC00847	lincRNA	Intron	.	.	Alu	0.545455
5	181313887	A->G	+	ENSG00000238035	AC138035.1	lincRNA	Intron	.	.	Alu	0.727273
6	132753901	A->G	-	ENSG00000234484	AL032821.1	antisense	Intron	.	.	Alu	0.166667
6	137857356	A->G	-	ENSG00000237499	AL357060.1	antisense	Intron	.	.	Alu	0.1875
7	100356070	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.153846
7	100356089	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.166667
7	100356093	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.230769
7	100356096	A->G	+	ENSG00000121716	PILRB	protein_coding	Intron	.	.	Alu	0.153846
7	100418776	A->G	+	ENSG00000078487	ZCWPW1	protein_coding	Intron	.	.	Alu	0.384615
7	100856712	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.166667
7	100856726	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.153846
7	100856732	A->G	+	ENSG00000146828	SLC12A9	protein_coding	Intron	.	.	Alu	0.181818
7	105103969	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.166667
7	105104014	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.181818
7	105104086	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.142857
7	105104099	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.357143
7	105104410	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.1
7	105104454	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.157895
7	105104543	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.0909091
7	105104568	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.214286
7	105104596	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.529412
7	105104597	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.176471
7	105104634	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.103448
7	105105112	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.357143
7	105105113	A->G	+	ENSG00000005483	KMT2E	protein_coding	Intron	.	.	Alu	0.142857
7	128653234	A->G	+	ENSG00000230715	AC018638.2	processed_pseudogene	Intron	.	.	Alu	0.222222
7	128653840	A->G	+	ENSG00000229413	AC018638.1	processed_pseudogene	Intron	.	.	Alu	0.285714
7	130928484	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.117647
7	130928490	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.176471
7	130928499	A->G	-	ENSG00000233559	LINC00513	lincRNA	Intron	.	.	Alu	0.111111
7	130944865	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.595745
7	130944866	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.0833333
7	130944867	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.306122
7	130945233	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.314286
7	130945435	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.125
7	130945478	A->G	-	ENSG00000285106	AC016831.7	lincRNA	Intron	.	.	Alu	0.813953
7	151080489	A->G	-	ENSG00000164896	FASTK	protein_coding	Intron	.	.	Alu	0.0833333
7	157381022	A->G	+	ENSG00000105993	DNAJB6	protein_coding	Intron	.	.	Alu	0.0952381
8	129847219	A->G	-	ENSG00000153310	FAM49B	protein_coding	Intron	.	.	Alu	0.2
9	129505996	A->G	+	ENSG00000204054	LINC00963	processed_transcript	Intron	.	.	Alu	0.0454545
9	129821659	A->G	-	ENSG00000136827	TOR1A	protein_coding	Intron	.	.	Alu	0.125
9	129821745	A->G	-	ENSG00000136827	TOR1A	protein_coding	Intron	.	.	Alu	0.0909091
9	129821785	A->G	-	ENSG00000136827	TOR1A	protein_coding	Intron	.	.	Alu	0.0740741
9	129821834	A->G	-	ENSG00000136827	TOR1A	protein_coding	Intron	.	.	Alu	0.0689655
9	137611492	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intron	.	.	Alu	0.5
9	137611493	A->G	+	ENSG00000197070	ARRDC1	protein_coding	Intron	.	.	Alu	0.35
9	137616171	A->G	-	ENSG00000203993	ARRDC1-AS1	antisense	Intron	.	.	Alu	0.117647
9	137616177	A->G	-	ENSG00000203993	ARRDC1-AS1	antisense	Intron	.	.	Alu	0.105263
10	101787829	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.046875
10	101787873	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.0384615
10	101787883	A->G	-	ENSG00000198408	OGA	protein_coding	Intron	.	.	Alu	0.106383
10	102654343	A->G	+	ENSG00000171206	TRIM8	protein_coding	Intron	.	.	Alu	0.166667
10	133295281	A->G	-	ENSG00000235245	AL360181.2	antisense	Intron	.	.	Alu	0.545455
11	117209787	A->G	-	ENSG00000280143	AP000892.3	TEC	Intron	.	.	Alu	0.2
11	117209803	A->G	-	ENSG00000280143	AP000892.3	TEC	Intron	.	.	Alu	0.3
11	117210834	A->G	-	ENSG00000160613	PCSK7	protein_coding	Intron	.	.	Alu	0.2
11	117212829	A->G	-	ENSG00000160613	PCSK7	protein_coding	Intron	.	.	Alu	0.2
11	119003758	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.108108
11	119003760	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.0526316
11	119003821	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.0833333
11	119004507	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.176471
11	119004508	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.3125
11	119004622	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.157895
11	119004624	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.285714
11	119004726	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.375
11	119004750	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.105263
11	119004821	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.0689655
11	119004849	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.0740741
11	119004858	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.32
11	119004869	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.0909091
11	119004875	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.0952381
11	119004877	A->G	+	ENSG00000254428	AP003392.1	antisense	Intron	.	.	Alu	0.571429
11	119009868	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.115385
11	119009874	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.08
11	119009890	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.258065
11	119009891	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.21875
11	119009912	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.166667
11	119009913	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.12
11	119009917	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.230769
11	119010099	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.166667
11	119010114	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.0689655
11	119010129	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.25
11	119010133	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.0909091
11	119010136	A->G	+	ENSG00000186166	CCDC84	protein_coding	Intron	.	.	Alu	0.0588235
12	110325908	A->G	+	ENSG00000174437	ATP2A2	protein_coding	Intron	.	.	Alu	0.3
12	121213337	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.25
12	121213628	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.4
12	121213629	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.5
12	121213770	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.363636
12	121213796	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.142857
12	121213835	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.111111
12	121214885	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.5
12	121215773	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.2
12	121215774	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.2
12	121215800	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.2
12	121215801	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.4
12	121215813	A->G	+	ENSG00000135124	P2RX4	protein_coding	Intron	.	.	Alu	0.357143
12	122222413	A->G	-	ENSG00000284934	DIABLO	protein_coding	Intron	.	.	Alu	0.181818
12	122507181	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.714286
12	122507231	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.181818
12	122507938	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.12
12	122507939	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.0833333
12	122507999	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.0833333
12	122508017	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.12
12	122508031	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.0769231
12	122508053	A->G	-	ENSG00000111011	RSRC2	protein_coding	Intron	.	.	Alu	0.130435
12	122870569	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.266667
12	122870624	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.0833333
12	122874692	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.111111
12	122874704	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.130435
12	122874714	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.291667
12	122874732	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.285714
12	122874826	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.0769231
12	122874870	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.2
12	122874885	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.105263
12	122874890	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.176471
12	122875122	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.25
12	122875302	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.142857
12	122875347	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.222222
12	122876649	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.0645161
12	122878096	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.105263
12	122878135	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.117647
12	122878694	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.2
12	122878933	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.111111
12	122880580	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.0714286
12	122883706	A->G	-	ENSG00000139722	VPS37B	protein_coding	Intron	.	.	Alu	0.181818
12	123459035	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.1875
12	123459036	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.1875
12	123459039	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.1875
12	123459173	A->G	+	ENSG00000184209	SNRNP35	protein_coding	Intron	.	.	Alu	0.142857
12	123605284	A->G	+	ENSG00000111364	DDX55	protein_coding	Intron	.	.	Alu	0.142857
12	123605285	A->G	+	ENSG00000111364	DDX55	protein_coding	Intron	.	.	Alu	0.153846
12	128814254	A->G	-	ENSG00000279500	AC108704.2	TEC	Intron	.	.	Alu	0.294118
14	102038144	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.2
14	102038214	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.153846
14	102038231	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.272727
14	102038253	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.166667
14	102045088	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.142857
14	102045182	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.375
14	102045196	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.214286
14	102045224	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.153846
14	102045258	A->G	+	ENSG00000258959	AL118558.1	transcribed_unitary_pseudogene	Intron	.	.	Alu	0.230769
14	103682587	A->G	+	ENSG00000246451	AL049840.1	antisense	Intron	.	.	Alu	0.125
14	103682893	A->G	+	ENSG00000246451	AL049840.1	antisense	Intron	.	.	Alu	0.0909091
X	101010229	A->G	-	ENSG00000188917	TRMT2B	protein_coding	three_prime_utr	.	.	Alu	0.1
X	108077954	A->G	+	ENSG00000101842	VSIG1	protein_coding	three_prime_utr	.	.	Alu	0.166667
X	108077970	A->G	+	ENSG00000101842	VSIG1	protein_coding	three_prime_utr	.	.	Alu	0.461538
X	108078572	A->G	+	ENSG00000101842	VSIG1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	110174105	A->G	+	ENSG00000157600	TMEM164	protein_coding	three_prime_utr	.	.	Alu	0.121212
X	119453604	A->G	+	ENSG00000077713	SLC25A43	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	120437958	A->G	-	ENSG00000005893	LAMP2	protein_coding	three_prime_utr	.	.	Alu	0.0301205
X	123909129	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.285714
X	123909211	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	123909214	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.157895
X	123910658	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
X	123912440	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	123912458	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0540541
X	123912472	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0434783
X	123912477	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0408163
X	123913265	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.1
X	123913288	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	123913419	A->G	+	ENSG00000101966	XIAP	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	1310013	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.25
X	1310136	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.181818
X	1310170	A->G	+	ENSG00000198223	CSF2RA	protein_coding	three_prime_utr	.	.	Alu	0.25
X	150767751	A->G	-	ENSG00000102181	CD99L2	protein_coding	three_prime_utr	.	.	Alu	0.333333
X	150767753	A->G	-	ENSG00000102181	CD99L2	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	15782853	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.238095
X	15782972	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.5
X	15783968	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.6
X	15784272	A->G	+	ENSG00000169239	CA5B	protein_coding	three_prime_utr	.	.	Alu	0.103448
X	15786128	A->G	+	ENSG00000281371	INE2	antisense	three_prime_utr	.	.	Alu	0.0952381
X	16763063	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.176471
X	16763078	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.1
X	16763087	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.15
X	16763106	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
X	16763124	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.08
X	16763152	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.535714
X	16763188	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.2
X	16763211	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	16763230	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.380952
X	16763379	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.294118
X	16763392	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.12
X	16763422	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
X	16763427	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.217391
X	16763447	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.15625
X	16763452	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	16763453	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.314286
X	16763470	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
X	16763494	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
X	16763535	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.117647
X	16763564	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.413793
X	16763575	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	16763616	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.210526
X	16763617	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.05
X	16763629	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
X	16763635	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.204545
X	16763930	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	16764004	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.130435
X	16764596	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	16764623	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
X	16764624	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	16764636	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.1875
X	16764743	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.304348
X	16764769	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.107143
X	16764925	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
X	16764970	A->G	+	ENSG00000169895	SYAP1	protein_coding	three_prime_utr	.	.	Alu	0.031746
X	23703451	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.2
X	23703455	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.25
X	23703461	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.25
X	23703499	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.1
X	23703513	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	23703544	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.142857
X	23703547	A->G	-	ENSG00000123130	ACOT9	protein_coding	three_prime_utr	.	.	Alu	0.125
X	2392407	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	2392424	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.0645161
X	2487001	A->G	-	ENSG00000169084	DHRSX	protein_coding	three_prime_utr	.	.	Alu	0.328358
X	2906853	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	2907073	A->G	-	ENSG00000006756	ARSD	protein_coding	three_prime_utr	.	.	Alu	0.533333
X	299722	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0625
X	300879	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.178571
X	301317	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0273973
X	301458	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0392157
X	302007	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	1
X	302511	A->G	+	ENSG00000182378	PLCXD1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
X	46603820	A->G	-	ENSG00000065923	SLC9A7	protein_coding	three_prime_utr	.	.	Alu	0.230769
X	54561052	A->G	+	ENSG00000130119	GNL3L	protein_coding	three_prime_utr	.	.	Alu	0.105263
X	71465202	A->G	+	ENSG00000147133	TAF1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
X	77827620	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.026087
X	77827669	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0291262
X	77827994	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0222222
X	77828014	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0361446
X	77828200	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
X	77828321	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0394737
X	77828348	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.125
X	77828469	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0322581
X	77828505	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0379747
X	77828563	A->G	-	ENSG00000102158	MAGT1	protein_coding	three_prime_utr	.	.	Alu	0.0373134
X	78129054	A->G	+	ENSG00000102144	PGK1	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	517715	A->G	-	ENSG00000141252	VPS53	protein_coding	three_prime_utr	.	.	Alu	0.1
20	436950	A->G	-	ENSG00000125875	TBC1D20	protein_coding	three_prime_utr	.	.	Alu	0.0714286
20	436985	A->G	-	ENSG00000125875	TBC1D20	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	1563730	A->G	-	ENSG00000160075	SSU72	protein_coding	three_prime_utr	.	.	Alu	0.0322581
1	1635543	A->G	-	ENSG00000248333	CDK11B	protein_coding	three_prime_utr	.	.	Alu	1
1	1663038	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.533333
1	1663539	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.097561
1	1663543	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0681818
1	1663640	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0294118
1	1664061	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.08
1	1664083	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	1664126	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	1664145	A->G	-	ENSG00000189339	SLC35E2B	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	6222527	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.291667
1	6223130	A->G	-	ENSG00000116237	ICMT	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	6522101	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.08
1	6522116	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	6522467	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.128205
1	6522941	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.125
1	6522976	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	6523156	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	6523336	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	6523354	A->G	-	ENSG00000162408	NOL9	protein_coding	three_prime_utr	.	.	Alu	0.0714286
1	9100942	A->G	-	ENSG00000180758	GPR157	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9265684	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	9265746	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0769231
1	9267094	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0666667
1	9267993	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.2
1	9271059	A->G	+	ENSG00000049239	H6PD	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	9385018	A->G	-	ENSG00000206573	THUMPD3-AS1	antisense	three_prime_utr	.	.	Alu	0.0909091
4	1386792	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.0952381
4	1386863	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	1389227	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	1389397	A->G	+	ENSG00000163945	UVSSA	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	2229677	A->G	-	ENSG00000214367	HAUS3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	2499377	A->G	+	ENSG00000063978	RNF4	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2835725	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0384615
4	2839236	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0289855
4	2839294	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0224719
4	2839295	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0224719
4	2839298	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0309278
4	2839588	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0810811
4	2839593	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.767442
4	2839625	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.641026
4	2839630	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.05
4	2839632	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.1
4	2839633	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.25641
4	2839661	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.108108
4	2839669	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.113636
4	2839694	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	2839707	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.268293
4	2839729	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.275
4	2839751	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	2839757	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
4	2839785	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
4	2839793	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.107143
4	2839824	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.075
4	2839825	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	2839838	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.18
4	2839840	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	2839844	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0566038
4	2839976	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0357143
4	2840075	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	2840132	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.214286
4	2840177	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0487805
4	2840203	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
4	2840207	A->G	+	ENSG00000087266	SH3BP2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	2938382	A->G	-	ENSG00000249673	NOP14-AS1	antisense	three_prime_utr	.	.	Alu	0.0833333
4	2938742	A->G	+	ENSG00000249673	NOP14-AS1	antisense	three_prime_utr	.	.	Alu	0.222222
6	2887790	A->G	-	ENSG00000170542	SERPINB9	protein_coding	three_prime_utr	.	.	Alu	0.0434783
6	2887803	A->G	-	ENSG00000170542	SERPINB9	protein_coding	three_prime_utr	.	.	Alu	0.0810811
6	3021083	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	3021109	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.2
6	3021178	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	3022224	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
6	3022300	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0344828
6	3022310	A->G	-	ENSG00000124588	NQO2	protein_coding	three_prime_utr	.	.	Alu	0.0566038
7	2442574	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.125
7	2442594	A->G	+	ENSG00000136213	CHST12	protein_coding	three_prime_utr	.	.	Alu	0.136364
7	4769693	A->G	+	ENSG00000164916	FOXK1	protein_coding	three_prime_utr	.	.	Alu	0.222222
7	5390253	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.285714
7	5390256	A->G	-	ENSG00000182095	TNRC18	protein_coding	three_prime_utr	.	.	Alu	0.357143
7	5621423	A->G	-	ENSG00000011275	RNF216	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	5621424	A->G	-	ENSG00000011275	RNF216	protein_coding	three_prime_utr	.	.	Alu	0.0555556
7	5622561	A->G	-	ENSG00000011275	RNF216	protein_coding	three_prime_utr	.	.	Alu	0.14
7	7246188	A->G	+	ENSG00000106392	C1GALT1	protein_coding	three_prime_utr	.	.	Alu	0.0930233
7	7246205	A->G	+	ENSG00000106392	C1GALT1	protein_coding	three_prime_utr	.	.	Alu	0.132075
7	7246206	A->G	+	ENSG00000106392	C1GALT1	protein_coding	three_prime_utr	.	.	Alu	0.115385
8	1782164	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	1782342	A->G	+	ENSG00000182372	CLN8	protein_coding	three_prime_utr	.	.	Alu	0.0555556
8	6643269	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.08
8	6643358	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.111111
8	6643382	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.117647
8	6643499	A->G	+	ENSG00000147316	MCPH1	protein_coding	three_prime_utr	.	.	Alu	0.173913
11	5710112	A->G	+	ENSG00000132274	TRIM22	protein_coding	three_prime_utr	.	.	Alu	0.328313
11	9750293	A->G	+	ENSG00000133789	SWAP70	protein_coding	three_prime_utr	.	.	Alu	0.0294118
12	6819852	A->G	+	ENSG00000010610	CD4	protein_coding	three_prime_utr	.	.	Alu	0.5
12	6976629	A->G	+	ENSG00000126749	EMG1	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	7919412	A->G	-	ENSG00000059804	SLC2A3	protein_coding	three_prime_utr	.	.	Alu	1
12	9010581	A->G	+	ENSG00000139187	KLRG1	protein_coding	three_prime_utr	.	.	Alu	0.411765
12	9696287	A->G	+	ENSG00000069493	CLEC2D	protein_coding	three_prime_utr	.	.	Alu	1
12	9752880	A->G	-	ENSG00000110848	CD69	protein_coding	three_prime_utr	.	.	Alu	1
16	2177619	A->G	+	ENSG00000131653	TRAF7	protein_coding	three_prime_utr	.	.	Alu	0.594595
16	4751825	A->G	-	ENSG00000266994	AC020663.1	processed_transcript	three_prime_utr	.	.	Alu	0.384615
16	4751826	A->G	-	ENSG00000266994	AC020663.1	processed_transcript	three_prime_utr	.	.	Alu	0.214286
16	9104243	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0316456
16	9104253	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0510949
16	9104337	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0275862
16	9106199	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0235294
16	9106202	A->G	+	ENSG00000260349	AC087190.1	antisense	three_prime_utr	.	.	Alu	0.0245399
16	9108386	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0326087
16	9110848	A->G	+	ENSG00000182831	C16orf72	protein_coding	three_prime_utr	.	.	Alu	0.0210526
17	1570143	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	1572928	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.186667
17	1573051	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.148936
17	1573054	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	1573081	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.125
17	1573716	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0294118
17	1573725	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
17	1573784	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
17	1573890	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	1573891	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	1573893	A->G	-	ENSG00000167703	SLC43A2	protein_coding	three_prime_utr	.	.	Alu	0.177778
17	1780496	A->G	-	ENSG00000186532	SMYD4	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	2418361	A->G	-	ENSG00000127804	METTL16	protein_coding	three_prime_utr	.	.	Alu	0.0689655
17	3036171	A->G	+	ENSG00000132359	RAP1GAP2	protein_coding	three_prime_utr	.	.	Alu	0.126582
17	3036172	A->G	+	ENSG00000132359	RAP1GAP2	protein_coding	three_prime_utr	.	.	Alu	0.0897436
17	3808802	A->G	-	ENSG00000074356	NCBP3	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	5027723	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.25
17	5027724	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.25
17	5027861	A->G	+	ENSG00000129250	KIF1C	protein_coding	three_prime_utr	.	.	Alu	0.2
17	5209263	A->G	-	ENSG00000161929	SCIMP	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	8227030	A->G	-	ENSG00000178971	CTC1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	1032810	A->G	+	ENSG00000064666	CNN2	protein_coding	three_prime_utr	.	.	Alu	0.238095
19	1032835	A->G	+	ENSG00000064666	CNN2	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	1216371	A->G	+	ENSG00000118046	STK11	protein_coding	three_prime_utr	.	.	Alu	0.2
19	1597308	A->G	-	ENSG00000127540	UQCR11	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	3468075	A->G	+	ENSG00000141905	NFIC	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	4292492	A->G	-	ENSG00000167664	TMIGD2	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	4653086	A->G	+	ENSG00000185361	TNFAIP8L1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	5909637	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.1
19	5909661	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	5910840	A->G	+	ENSG00000187650	VMAC	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7084369	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	7084370	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	7084420	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	7084430	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	7084447	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0434783
19	7084450	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.212766
19	7084451	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	7084454	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	7084455	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	7084480	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	7084492	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.156863
19	7084542	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.175
19	7084562	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.037037
19	7084567	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7084573	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0384615
19	7084618	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0289855
19	7084627	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.109589
19	7085198	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0857143
19	7085266	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	7085290	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.103448
19	7085399	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.106383
19	7085403	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	7085407	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.06
19	7085426	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0454545
19	7085427	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	7085438	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.119048
19	7085440	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0465116
19	7085952	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.047619
19	7085972	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.414634
19	7085974	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0487805
19	7085975	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.195122
19	7086005	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	7086020	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0925926
19	7086029	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	7086043	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.16
19	7086044	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.1
19	7086069	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0377358
19	7086071	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0754717
19	7086072	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0943396
19	7086080	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0740741
19	7086081	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0377358
19	7086084	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.137255
19	7086108	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0689655
19	7086111	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	7086125	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7086151	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.15
19	7086152	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	7086161	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	7086186	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	7086410	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	7086455	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	7086491	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.2
19	7086511	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	7086592	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	7086622	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.4
19	7086623	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.4
19	7086635	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7086839	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	7086840	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.461538
19	7086882	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	7086898	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	7086909	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.2
19	7086918	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.363636
19	7086941	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.125
19	7086949	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.210526
19	7086957	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	7086958	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.5
19	7086989	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	7087393	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.148148
19	7087420	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	7087429	A->G	+	ENSG00000130544	ZNF557	protein_coding	three_prime_utr	.	.	Alu	0.08
19	8520906	A->G	-	ENSG00000142347	MYO1F	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	8540447	A->G	-	ENSG00000142347	MYO1F	protein_coding	three_prime_utr	.	.	Alu	0.6875
19	8540453	A->G	-	ENSG00000142347	MYO1F	protein_coding	three_prime_utr	.	.	Alu	0.4375
19	9524625	A->G	-	ENSG00000130818	ZNF426	protein_coding	three_prime_utr	.	.	Alu	0.2
19	9561642	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	9561666	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.027027
19	9561670	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0405405
19	9561707	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0307692
19	9561789	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0294118
19	9562225	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0363636
19	9562329	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	9562414	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	9562795	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0777778
19	9562834	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.078125
19	9562955	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	9562975	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	9562996	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0789474
19	9563662	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	9563698	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	9563704	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0289855
19	9564296	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.115942
19	9564371	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.3
19	9565546	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	9565603	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0338983
19	9565609	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0327869
19	9565614	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0483871
19	9565627	A->G	-	ENSG00000197961	ZNF121	protein_coding	three_prime_utr	.	.	Alu	0.0769231
20	3108245	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.4
20	3108850	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.25
20	3108851	A->G	-	ENSG00000235958	UBOX5-AS1	antisense	three_prime_utr	.	.	Alu	0.166667
20	3867434	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3869028	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0909091
20	3869051	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.3
20	3869067	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.25
20	3869552	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	3869961	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.157895
20	3871066	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.125
20	3871110	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.0833333
20	3875335	A->G	+	ENSG00000088888	MAVS	protein_coding	three_prime_utr	.	.	Alu	0.105263
20	5194877	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.269231
20	5194893	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.653846
20	5194900	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.137931
20	5195158	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.5
20	5195159	A->G	+	ENSG00000101290	CDS2	protein_coding	three_prime_utr	.	.	Alu	0.217391
1	11287782	A->G	+	ENSG00000120942	UBIAD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	11287808	A->G	+	ENSG00000120942	UBIAD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	11295934	A->G	+	ENSG00000120942	UBIAD1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	15491540	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	15491570	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	15491586	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.5
1	15491610	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.125
1	15491614	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.125
1	15491658	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	15491663	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	15491675	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.1
1	15491744	A->G	-	ENSG00000132906	CASP9	protein_coding	three_prime_utr	.	.	Alu	0.3
1	23381148	A->G	-	ENSG00000204219	TCEA3	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	24537621	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	24537637	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	24537642	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.25
1	24537643	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	24537648	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	24537697	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.25
1	24537698	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	24537712	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.333333
1	24537713	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	24537715	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	24537806	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	24537878	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.186047
1	24537889	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.06
1	24538620	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.782609
1	24538624	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	24538648	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.0425532
1	24538652	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.0625
1	24538673	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.0877193
1	24538698	A->G	+	ENSG00000117602	RCAN3	protein_coding	three_prime_utr	.	.	Alu	0.3125
1	24538821	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.0454545
1	24538843	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.367647
1	24538858	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.105882
1	24538879	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.021978
1	24538889	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.021978
1	24538897	A->G	+	ENSG00000264443	AL445686.2	lincRNA	three_prime_utr	.	.	Alu	0.021978
1	28335302	A->G	+	ENSG00000130772	MED18	protein_coding	three_prime_utr	.	.	Alu	0.25
1	28498827	A->G	+	ENSG00000204138	PHACTR4	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	32682618	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	32683665	A->G	+	ENSG00000162521	RBBP4	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	35602088	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.0416667
1	35602330	A->G	-	ENSG00000126067	PSMB2	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	36063818	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.545455
1	36063826	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	36063848	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	36063861	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.5
1	36063866	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.3
1	36063874	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	36063888	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.538462
1	36068423	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.375
1	36069801	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	36069802	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	36069837	A->G	+	ENSG00000126070	AGO3	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	37861643	A->G	-	ENSG00000204084	INPP5B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	39748527	A->G	+	ENSG00000084072	PPIE	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	39748555	A->G	+	ENSG00000084072	PPIE	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	39748589	A->G	+	ENSG00000084072	PPIE	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	42777134	A->G	+	ENSG00000164008	C1orf50	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	42777150	A->G	+	ENSG00000164008	C1orf50	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	52350831	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	52350834	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	52350843	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	52350884	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.08
1	52350919	A->G	-	ENSG00000154222	CC2D1B	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	52409490	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	52409491	A->G	+	ENSG00000134748	PRPF38A	protein_coding	three_prime_utr	.	.	Alu	0.5
1	52823222	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	52823225	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.125
1	52823253	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	52824039	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	52824188	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.428571
1	52824280	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.1
1	52824385	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
1	52824386	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0833333
1	52824518	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.307692
1	52824528	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.0689655
1	52824627	A->G	+	ENSG00000162378	ZYG11B	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	54030539	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.1
1	54030542	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	54030543	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	54030544	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	54030565	A->G	-	ENSG00000116209	TMEM59	protein_coding	three_prime_utr	.	.	Alu	0.214286
1	66985112	A->G	+	ENSG00000198160	MIER1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
1	66985398	A->G	+	ENSG00000198160	MIER1	protein_coding	three_prime_utr	.	.	Alu	0.0567376
1	66985399	A->G	+	ENSG00000198160	MIER1	protein_coding	three_prime_utr	.	.	Alu	0.0728477
1	67412092	A->G	-	ENSG00000142864	SERBP1	protein_coding	three_prime_utr	.	.	Alu	0.096
1	85653636	A->G	-	ENSG00000117174	ZNHIT6	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	89182646	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.103448
1	89182664	A->G	-	ENSG00000162654	GBP4	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	90032181	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	90032220	A->G	+	ENSG00000162664	ZNF326	protein_coding	three_prime_utr	.	.	Alu	0.25
1	93366991	A->G	+	ENSG00000117505	DR1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	24000294	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
2	24000380	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0487805
2	24000609	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
2	24001266	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.2
2	24002670	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	24003986	A->G	+	ENSG00000173960	UBXN2A	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	26779203	A->G	+	ENSG00000213699	SLC35F6	protein_coding	three_prime_utr	.	.	Alu	0.0363636
2	26779553	A->G	+	ENSG00000213699	SLC35F6	protein_coding	three_prime_utr	.	.	Alu	0.038961
2	26779938	A->G	+	ENSG00000213699	SLC35F6	protein_coding	three_prime_utr	.	.	Alu	0.06
2	32308692	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	32309326	A->G	+	ENSG00000119820	YIPF4	protein_coding	three_prime_utr	.	.	Alu	0.909091
2	37100426	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0810811
2	37100446	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.195402
2	37100447	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.302326
2	37100471	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0793651
2	37100472	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0592593
2	37100519	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.892857
2	37100523	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.518519
2	37100559	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.887324
2	37100865	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.216216
2	37100869	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.241071
2	37100870	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.560748
2	37100873	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.300971
2	37100899	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	37100932	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.759615
2	37100939	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.771429
2	37100944	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.401709
2	37100954	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.695035
2	37100957	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0519481
2	37100989	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0564103
2	37101248	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.06875
2	37101540	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.242991
2	37101621	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0544554
2	37101657	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.11215
2	37101955	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0538462
2	37101996	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0238095
2	37102091	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0365854
2	37102177	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0506912
2	37102202	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0335196
2	37102234	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0210526
2	37102241	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0378378
2	37103248	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.259259
2	37103261	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.115385
2	37103285	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	37103373	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0882353
2	37103375	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	37103378	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.151515
2	37103384	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.138889
2	37103391	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
2	37103399	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	37103935	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0230769
2	37103950	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0263158
2	37103991	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.075
2	37104058	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	37104077	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	37104083	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	37104093	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.285714
2	37104096	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
2	37104107	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.097561
2	37104126	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.314815
2	37104132	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.135593
2	37104134	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.237288
2	37104138	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0333333
2	37104396	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0246914
2	37104422	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.148936
2	37104448	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0681818
2	37104610	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0344828
2	37104786	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.300752
2	37104881	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.195556
2	37106959	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0385965
2	37106996	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0310078
2	37107003	A->G	-	ENSG00000055332	EIF2AK2	protein_coding	three_prime_utr	.	.	Alu	0.0342466
2	60899222	A->G	+	ENSG00000162924	REL	protein_coding	three_prime_utr	.	.	Alu	0.1
2	69459349	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0232558
2	69459441	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	69461621	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	69461622	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.242424
2	69461623	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	69461647	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
2	69461662	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
2	69461663	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.176471
2	69461717	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.35
2	69461720	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	69461769	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.5
2	69461770	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.210526
2	69461771	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.421053
2	69461774	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	69461859	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	69461864	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	69462579	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	69462593	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.105263
2	69462594	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.157895
2	69462619	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	69462638	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	69463445	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	69463467	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	69463569	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.1
2	69463636	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	69463676	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.235294
2	69463680	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	69463681	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	69463740	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	69463778	A->G	-	ENSG00000115977	AAK1	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	86024893	A->G	-	ENSG00000068654	POLR1A	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	96249330	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	96249368	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.214286
2	96249500	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	96249514	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0483871
2	96249575	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0681818
2	96249578	A->G	-	ENSG00000135956	TMEM127	protein_coding	three_prime_utr	.	.	Alu	0.0612245
2	97163607	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	97163615	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	97163650	A->G	+	ENSG00000135976	ANKRD36	protein_coding	three_prime_utr	.	.	Alu	0.133333
2	98622897	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.0392157
2	98622909	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.243243
2	98622910	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.0789474
2	98622919	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.514286
2	98622932	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.178571
2	98622936	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.21875
2	98622937	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	98623012	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	98624085	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	98624150	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	98624284	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.302326
2	98624293	A->G	-	ENSG00000071073	MGAT4A	protein_coding	three_prime_utr	.	.	Alu	0.0638298
3	10150949	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0375
3	10150997	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.0294118
3	10151674	A->G	+	ENSG00000134086	VHL	protein_coding	three_prime_utr	.	.	Alu	0.3
3	15072187	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.232558
3	15072209	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.307692
3	15072226	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	15072229	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	15072235	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0697674
3	15072270	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0967742
3	15072292	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.172414
3	15072309	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.186047
3	15072310	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0465116
3	15072348	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	15072384	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	15072746	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0487805
3	15072774	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	15072786	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.15625
3	15072811	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	15072846	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.222222
3	15072852	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.304348
3	15072878	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.103448
3	15072893	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0588235
3	15072894	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.233333
3	15072897	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.206897
3	15072914	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.177778
3	15072947	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0425532
3	15072986	A->G	-	ENSG00000131381	RBSN	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	23921837	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	23921894	A->G	+	ENSG00000197885	NKIRAS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	32955281	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.4375
3	32955282	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.3125
3	32955350	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	32955351	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.3
3	32955372	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	32955375	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.25
3	32955382	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
3	32955387	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	32955390	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	32955416	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	32955417	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.820513
3	32955422	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0487805
3	32955426	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.116279
3	32955430	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0454545
3	32955482	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	32955674	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.03125
3	32955690	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	32955727	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.047619
3	32955735	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.126984
3	32955736	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0714286
3	32955739	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.458333
3	32955749	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.507463
3	32955751	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0307692
3	32955776	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0363636
3	32955791	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.140351
3	32955794	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.354167
3	32955816	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.803922
3	32955820	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.12069
3	32955852	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.234043
3	32955870	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	32955883	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0285714
3	32955958	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.101695
3	32955971	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0240964
3	32956016	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.125
3	32956052	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.038961
3	32956062	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0740741
3	32956137	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0416667
3	32956175	A->G	+	ENSG00000183813	CCR4	protein_coding	three_prime_utr	.	.	Alu	0.0652174
3	40537506	A->G	+	ENSG00000172888	ZNF621	protein_coding	three_prime_utr	.	.	Alu	0.4
3	44749167	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.0606061
3	44749570	A->G	-	ENSG00000163807	KIAA1143	protein_coding	three_prime_utr	.	.	Alu	0.6
3	46375680	A->G	+	ENSG00000160791	CCR5	protein_coding	three_prime_utr	.	.	Alu	0.192308
3	46375729	A->G	+	ENSG00000160791	CCR5	protein_coding	three_prime_utr	.	.	Alu	0.764706
3	46375730	A->G	+	ENSG00000160791	CCR5	protein_coding	three_prime_utr	.	.	Alu	0.625
3	46375779	A->G	+	ENSG00000160791	CCR5	protein_coding	three_prime_utr	.	.	Alu	0.35
3	46375781	A->G	+	ENSG00000160791	CCR5	protein_coding	three_prime_utr	.	.	Alu	0.45
3	48748236	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	48748237	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
3	48749512	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.031746
3	48749681	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0227273
3	48749686	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0253165
3	48750194	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0465116
3	48751183	A->G	-	ENSG00000114302	PRKAR2A	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	49415292	A->G	+	ENSG00000145022	TCTA	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	57563190	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	57563191	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	57563197	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.266667
3	57563199	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	57563249	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	57563272	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.0909091
3	57563273	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	57563631	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	57563638	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	57563791	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	57564955	A->G	+	ENSG00000174840	PDE12	protein_coding	three_prime_utr	.	.	Alu	0.2
3	57626663	A->G	-	ENSG00000174839	DENND6A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	15849274	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	15850635	A->G	+	ENSG00000004468	CD38	protein_coding	three_prime_utr	.	.	Alu	0.0595238
4	17626925	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	17626928	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	17627044	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	17627068	A->G	+	ENSG00000118579	MED28	protein_coding	three_prime_utr	.	.	Alu	0.125
4	17801914	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.5
4	17801930	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	17802094	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	17803052	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0384615
4	17803058	A->G	-	ENSG00000163257	DCAF16	protein_coding	three_prime_utr	.	.	Alu	0.0384615
4	39548837	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.1
4	39549119	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.1
4	39549131	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0869565
4	39549137	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.26087
4	39549192	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.529412
4	39549320	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.1875
4	39549326	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.111111
4	39549411	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.375
4	39549467	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.3
4	39549546	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.333333
4	39549547	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.583333
4	39550356	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.130435
4	39550981	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0606061
4	39551114	A->G	-	ENSG00000249348	UGDH-AS1	antisense	three_prime_utr	.	.	Alu	0.0833333
4	56460974	A->G	+	ENSG00000128050	PAICS	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	67469376	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.4
4	67469415	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.25
4	67469462	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	67469624	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	67470326	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.3
4	67470450	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.545455
4	67470460	A->G	-	ENSG00000145241	CENPC	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	70985577	A->G	+	ENSG00000173542	MOB1B	protein_coding	three_prime_utr	.	.	Alu	0.0909091
4	70985580	A->G	+	ENSG00000173542	MOB1B	protein_coding	three_prime_utr	.	.	Alu	0.136364
4	70985593	A->G	+	ENSG00000173542	MOB1B	protein_coding	three_prime_utr	.	.	Alu	0.0606061
4	73057170	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	73057404	A->G	-	ENSG00000163626	COX18	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	77718349	A->G	-	ENSG00000138767	CNOT6L	protein_coding	three_prime_utr	.	.	Alu	0.0576923
4	83294091	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.384615
4	83294104	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.103448
4	83294121	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.148148
4	83294126	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.16129
4	83294165	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	83294171	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.1
4	83294180	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	83294197	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.181818
4	83294207	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.416667
4	83294231	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.176471
4	83294263	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	83294265	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.206897
4	83294285	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	83294308	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	83294326	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.425532
4	83294351	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.102564
4	83294528	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	83294565	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	83294566	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.125
4	83294570	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	83294644	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.185185
4	83294651	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0535714
4	83294660	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0416667
4	83294676	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0961538
4	83294677	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0612245
4	83294698	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.26
4	83294713	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0869565
4	83294727	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	83294754	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	83294758	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.233333
4	83294782	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0789474
4	83294810	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.216216
4	83294811	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	83294820	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	83294837	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.047619
4	83294876	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.170732
4	83294884	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.422222
4	83294886	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.0526316
4	83294912	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.121951
4	83294914	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.309524
4	83294982	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	83295016	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.5
4	83295046	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.357143
4	83295049	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.5
4	83295053	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.571429
4	83295063	A->G	-	ENSG00000173083	HPSE	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	88258443	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	88258465	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	88259166	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	88259182	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.05
4	88259203	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.0408163
4	88259230	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.08
4	88260228	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.111111
4	88261762	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.0487805
4	88261940	A->G	-	ENSG00000163644	PPM1K	protein_coding	three_prime_utr	.	.	Alu	0.0454545
4	89725481	A->G	-	ENSG00000251095	AC097478.1	antisense	three_prime_utr	.	.	Alu	0.285714
4	99880590	A->G	-	ENSG00000109270	LAMTOR3	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	37290226	A->G	-	ENSG00000113569	NUP155	protein_coding	three_prime_utr	.	.	Alu	0.0714286
5	43381497	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	43381641	A->G	-	ENSG00000151882	CCL28	protein_coding	three_prime_utr	.	.	Alu	0.1
5	65668117	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.3
5	65668121	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65668135	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65668145	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	65668225	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.7
5	65668226	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.3
5	65668353	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.246154
5	65668365	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.288889
5	65668366	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0465116
5	65668392	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.245283
5	65668393	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0576923
5	65668418	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.125
5	65668485	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.322581
5	65668487	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.413793
5	65668499	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.16
5	65668521	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.125
5	65668561	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	65668575	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	65668584	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0857143
5	65668617	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.153846
5	65668641	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	65668658	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.272727
5	65668659	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	65668776	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	65668796	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.238095
5	65668799	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.363636
5	65668814	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.08
5	65668851	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	65668856	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.259259
5	65668861	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.148148
5	65668875	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.75
5	65668891	A->G	-	ENSG00000197860	SGTB	protein_coding	three_prime_utr	.	.	Alu	0.930233
5	68301325	A->G	+	ENSG00000145675	PIK3R1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
5	75379138	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.125
5	75379143	A->G	-	ENSG00000113163	COL4A3BP	protein_coding	three_prime_utr	.	.	Alu	0.266667
5	96774786	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.196429
5	96774788	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	96774838	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.057971
5	96774839	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.0735294
5	96774840	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.549296
5	96774843	A->G	-	ENSG00000164307	ERAP1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
6	10759151	A->G	+	ENSG00000137210	TMEM14B	protein_coding	three_prime_utr	.	.	Alu	0.125
6	10759160	A->G	+	ENSG00000137210	TMEM14B	protein_coding	three_prime_utr	.	.	Alu	0.125
6	10759177	A->G	+	ENSG00000137210	TMEM14B	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	10759178	A->G	+	ENSG00000137210	TMEM14B	protein_coding	three_prime_utr	.	.	Alu	0.8
6	10759190	A->G	+	ENSG00000137210	TMEM14B	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	13288416	A->G	+	ENSG00000215022	AL008729.1	antisense	three_prime_utr	.	.	Alu	1
6	13790699	A->G	-	ENSG00000050393	MCUR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	18129067	A->G	-	ENSG00000137364	TPMT	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	18129073	A->G	-	ENSG00000137364	TPMT	protein_coding	three_prime_utr	.	.	Alu	0.08
6	24806066	A->G	-	ENSG00000282804	AL512428.1	protein_coding	three_prime_utr	.	.	Alu	0.032
6	25984601	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0344828
6	25984623	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0338983
6	25984635	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0416667
6	25984680	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0266667
6	25984779	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0857143
6	25984780	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0571429
6	25984817	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0434783
6	25986312	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0571429
6	25988595	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.125
6	25988633	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	25988694	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	25990426	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.2
6	25990436	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.25
6	25990448	A->G	+	ENSG00000112343	TRIM38	protein_coding	three_prime_utr	.	.	Alu	0.2
6	33300494	A->G	-	ENSG00000231925	TAPBP	protein_coding	three_prime_utr	.	.	Alu	0.0235294
6	34589009	A->G	-	ENSG00000196821	C6orf106	protein_coding	three_prime_utr	.	.	Alu	0.0813953
6	36140565	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.171429
6	36140799	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.136364
6	36140850	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	36140856	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.227273
6	36140915	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	36141023	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.157895
6	36141036	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.16
6	36141040	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.130435
6	36141063	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.304348
6	36141553	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	36141554	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.357143
6	36141564	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.153846
6	36141592	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.2
6	36141593	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.666667
6	36141654	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.0869565
6	36141667	A->G	+	ENSG00000156711	MAPK13	protein_coding	three_prime_utr	.	.	Alu	0.12
6	36495068	A->G	-	ENSG00000112079	STK38	protein_coding	three_prime_utr	.	.	Alu	0.060241
6	37028726	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0483871
6	37028814	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0266667
6	37028844	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.0206186
6	37028871	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.025
6	37028883	A->G	+	ENSG00000146192	FGD2	protein_coding	three_prime_utr	.	.	Alu	0.045977
6	42077857	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.1
6	42077898	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.08
6	42079586	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42079788	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	42079789	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.2
6	42079816	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.266667
6	42079828	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	42080429	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.272727
6	42080600	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.133333
6	42080605	A->G	+	ENSG00000137413	TAF8	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	42207397	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.025974
6	42207448	A->G	-	ENSG00000048544	MRPS10	protein_coding	three_prime_utr	.	.	Alu	0.0363636
6	42886829	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
6	42887363	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0285714
6	42887382	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.030303
6	42888592	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.116667
6	42889192	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0545455
6	42889263	A->G	+	ENSG00000146223	RPL7L1	protein_coding	three_prime_utr	.	.	Alu	0.0333333
6	43021028	A->G	+	ENSG00000124702	KLHDC3	protein_coding	three_prime_utr	.	.	Alu	0.0892857
6	53003289	A->G	-	ENSG00000112144	ICK	protein_coding	three_prime_utr	.	.	Alu	0.238095
6	53003940	A->G	-	ENSG00000112144	ICK	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	53003941	A->G	-	ENSG00000112144	ICK	protein_coding	three_prime_utr	.	.	Alu	0.12
6	53003942	A->G	-	ENSG00000112144	ICK	protein_coding	three_prime_utr	.	.	Alu	0.12
6	73424178	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	73424191	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.52381
6	73424267	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.181818
6	73425032	A->G	-	ENSG00000164430	CGAS	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	73516585	A->G	-	ENSG00000156508	EEF1A1	protein_coding	three_prime_utr	.	.	Alu	0.0215054
7	17344710	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.119048
7	17344829	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0212766
7	17344849	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0283019
7	17344850	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.03
7	17344858	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.036036
7	17344889	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0243902
7	17344905	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0487805
7	17345053	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0508475
7	17345116	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.027027
7	17345159	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.026087
7	17345235	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0275862
7	17345262	A->G	+	ENSG00000106546	AHR	protein_coding	three_prime_utr	.	.	Alu	0.0330579
7	25120188	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.4
7	25120223	A->G	-	ENSG00000172115	CYCS	protein_coding	three_prime_utr	.	.	Alu	0.2
7	38724621	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.125
7	38724838	A->G	-	ENSG00000006715	VPS41	protein_coding	three_prime_utr	.	.	Alu	0.166667
7	44801789	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.217391
7	44801790	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0561798
7	44801885	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0243902
7	44801886	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0235294
7	44801911	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0217391
7	44802248	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.0540541
7	44802371	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.025641
7	44802500	A->G	+	ENSG00000196262	PPIA	protein_coding	three_prime_utr	.	.	Alu	0.225
7	44829489	A->G	-	ENSG00000105968	H2AFV	protein_coding	three_prime_utr	.	.	Alu	0.0243902
7	48103958	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.170732
7	48103964	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
7	48103965	A->G	+	ENSG00000183696	UPP1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
7	66153170	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0379747
7	66153248	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0215054
7	66153260	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0277778
7	66153282	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0222222
7	66153379	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0588235
7	66153384	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0240964
7	66153388	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.0416667
7	66153559	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.105263
7	66153849	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.027027
7	66154002	A->G	+	ENSG00000241258	CRCP	protein_coding	three_prime_utr	.	.	Alu	0.030303
7	74231772	A->G	-	ENSG00000049541	RFC2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
7	92613435	A->G	-	ENSG00000105810	CDK6	protein_coding	three_prime_utr	.	.	Alu	0.056338
8	11842717	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0810811
8	11843077	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.205128
8	11843126	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0625
8	11843406	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0697674
8	11843660	A->G	-	ENSG00000164733	CTSB	protein_coding	three_prime_utr	.	.	Alu	0.0689655
8	22689088	A->G	-	ENSG00000179388	EGR3	protein_coding	three_prime_utr	.	.	Alu	0.0925926
8	23191380	A->G	-	ENSG00000104689	TNFRSF10A	protein_coding	three_prime_utr	.	.	Alu	0.0606061
8	23191427	A->G	-	ENSG00000104689	TNFRSF10A	protein_coding	three_prime_utr	.	.	Alu	0.102941
8	29064727	A->G	+	ENSG00000147421	HMBOX1	protein_coding	three_prime_utr	.	.	Alu	0.157895
8	30678505	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0377358
8	30678618	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0344828
8	30679087	A->G	-	ENSG00000104687	GSR	protein_coding	three_prime_utr	.	.	Alu	0.0526316
8	38970789	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.020202
8	38972210	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0224719
8	38972226	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0232558
8	38972969	A->G	+	ENSG00000253645	AC108863.1	antisense	three_prime_utr	.	.	Alu	0.0314961
8	43021052	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.1
8	43021408	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3125
8	43021512	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.105263
8	43023735	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.3
8	43028239	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
8	43028273	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43028274	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
8	43029316	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
8	43029330	A->G	+	ENSG00000254673	AC110275.1	protein_coding	three_prime_utr	.	.	Alu	0.0588235
8	51818304	A->G	-	ENSG00000168300	PCMTD1	protein_coding	three_prime_utr	.	.	Alu	1
8	97728723	A->G	+	ENSG00000147649	MTDH	protein_coding	three_prime_utr	.	.	Alu	0.0571429
9	15168623	A->G	-	ENSG00000155158	TTC39B	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	19373116	A->G	+	ENSG00000137145	DENND4C	protein_coding	three_prime_utr	.	.	Alu	0.16
9	19373162	A->G	+	ENSG00000137145	DENND4C	protein_coding	three_prime_utr	.	.	Alu	0.12766
9	19373163	A->G	+	ENSG00000137145	DENND4C	protein_coding	three_prime_utr	.	.	Alu	0.212766
9	32456318	A->G	-	ENSG00000107201	DDX58	protein_coding	three_prime_utr	.	.	Alu	0.923077
9	32456320	A->G	-	ENSG00000107201	DDX58	protein_coding	three_prime_utr	.	.	Alu	0.291667
9	32456367	A->G	-	ENSG00000107201	DDX58	protein_coding	three_prime_utr	.	.	Alu	0.666667
9	32456382	A->G	-	ENSG00000107201	DDX58	protein_coding	three_prime_utr	.	.	Alu	0.65
9	32456451	A->G	-	ENSG00000107201	DDX58	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	35755596	A->G	+	ENSG00000215183	MSMP	protein_coding	three_prime_utr	.	.	Alu	0.230769
9	37503378	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.037037
9	37503562	A->G	+	ENSG00000137054	POLR1E	protein_coding	three_prime_utr	.	.	Alu	0.0322581
9	71973108	A->G	+	ENSG00000155621	C9orf85	protein_coding	three_prime_utr	.	.	Alu	0.210526
9	78271768	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.08
9	78271781	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.26087
9	78271801	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.08
9	78271826	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	78271830	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.388889
9	78271927	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.235294
9	78271931	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.176471
9	78271967	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.8125
9	78271969	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.25
9	78271970	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.6875
9	78271975	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.133333
9	78272260	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	78272261	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.714286
9	78275880	A->G	+	ENSG00000148019	CEP78	protein_coding	three_prime_utr	.	.	Alu	0.15
9	86266970	A->G	-	ENSG00000135070	ISCA1	protein_coding	three_prime_utr	.	.	Alu	0.333333
9	92079367	A->G	-	ENSG00000090054	SPTLC1	protein_coding	three_prime_utr	.	.	Alu	0.2
10	20284286	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.1875
10	20284468	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.117647
10	20284492	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.047619
10	20284509	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0701754
10	20284521	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0892857
10	20284544	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0555556
10	20284568	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.122807
10	20284569	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0517241
10	20286850	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0392157
10	20286924	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
10	20286986	A->G	+	ENSG00000120594	PLXDC2	protein_coding	three_prime_utr	.	.	Alu	0.037037
10	31387263	A->G	+	ENSG00000148516	ZEB1	protein_coding	three_prime_utr	.	.	Alu	0.304348
10	49973498	A->G	+	ENSG00000178440	LINC00843	lincRNA	three_prime_utr	.	.	Alu	0.176471
10	49973602	A->G	+	ENSG00000178440	LINC00843	lincRNA	three_prime_utr	.	.	Alu	0.3
10	58397939	A->G	+	ENSG00000108064	TFAM	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	68479561	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.461538
10	68479942	A->G	-	ENSG00000122912	SLC25A16	protein_coding	three_prime_utr	.	.	Alu	0.333333
10	70149199	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.133333
10	70149250	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.0689655
10	70149251	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	70149252	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.107143
10	70149354	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	70149702	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	70149827	A->G	-	ENSG00000079332	SAR1A	protein_coding	three_prime_utr	.	.	Alu	0.214286
10	70424426	A->G	+	ENSG00000148730	EIF4EBP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
10	72234025	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.636364
10	72234260	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.2
10	72234268	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.272727
10	72234347	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0487805
10	72234372	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0491803
10	72234400	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0405405
10	72234412	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0864198
10	72234974	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0882353
10	72235001	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0666667
10	72235024	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0740741
10	72235435	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0576923
10	72235453	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0434783
10	72235457	A->G	+	ENSG00000166295	ANAPC16	protein_coding	three_prime_utr	.	.	Alu	0.0416667
10	73248990	A->G	-	ENSG00000182180	MRPS16	protein_coding	three_prime_utr	.	.	Alu	0.0333333
10	99713753	A->G	-	ENSG00000014919	COX15	protein_coding	three_prime_utr	.	.	Alu	0.0714286
11	18398983	A->G	+	ENSG00000134333	LDHA	protein_coding	three_prime_utr	.	.	Alu	0.047619
11	32604358	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	32604385	A->G	+	ENSG00000149100	EIF3M	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	36487077	A->G	-	ENSG00000175104	TRAF6	protein_coding	three_prime_utr	.	.	Alu	0.166667
11	62751235	A->G	-	ENSG00000185670	ZBTB3	protein_coding	three_prime_utr	.	.	Alu	0.181818
11	62830471	A->G	-	ENSG00000162236	STX5	protein_coding	three_prime_utr	.	.	Alu	0.115385
11	62830485	A->G	-	ENSG00000162236	STX5	protein_coding	three_prime_utr	.	.	Alu	0.0689655
11	65775996	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
11	65776023	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0266667
11	65776028	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.123288
11	65776853	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0238095
11	65776862	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0336134
11	65776883	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0416667
11	65777038	A->G	-	ENSG00000254470	AP5B1	protein_coding	three_prime_utr	.	.	Alu	0.0337079
11	66649781	A->G	+	ENSG00000173933	RBM4	protein_coding	three_prime_utr	.	.	Alu	0.111111
11	69665989	A->G	-	ENSG00000149716	ORAOV1	protein_coding	three_prime_utr	.	.	Alu	0.153846
11	69666072	A->G	-	ENSG00000149716	ORAOV1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
11	74455743	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.142857
11	74455758	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.222222
11	74455946	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.25
11	74455955	A->G	-	ENSG00000254928	AP001372.3	antisense	three_prime_utr	.	.	Alu	0.125
11	74641915	A->G	+	ENSG00000077514	POLD3	protein_coding	three_prime_utr	.	.	Alu	0.666667
11	94416580	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	94416589	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.214286
11	94416601	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.571429
11	94416611	A->G	-	ENSG00000020922	MRE11	protein_coding	three_prime_utr	.	.	Alu	0.923077
12	10315186	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0705882
12	10315188	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0227273
12	10315219	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0347826
12	10315248	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.04
12	10315252	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.21875
12	10315360	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.100917
12	10315373	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.341667
12	10315387	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0735294
12	10315388	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0888889
12	10315828	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
12	10315862	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.373737
12	10315863	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	10315884	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0447761
12	10315885	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.309859
12	10315903	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0985915
12	10315908	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0519481
12	10315942	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.028169
12	10315953	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	10315959	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0243902
12	10315966	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.03125
12	10315968	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0344828
12	10315984	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.16
12	10315989	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.102041
12	10315991	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0612245
12	10315998	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.375
12	10316003	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.169492
12	10316043	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.657895
12	10316459	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0229885
12	10316477	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.224719
12	10316482	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.144444
12	10316496	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.25
12	10316503	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0609756
12	10316543	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0609756
12	10316550	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0617284
12	10316589	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.231884
12	10316612	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0405405
12	10316637	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.126582
12	10316638	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.240506
12	10316664	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.17284
12	10316665	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0240964
12	10316677	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
12	10318582	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.263158
12	10318583	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.210526
12	10318590	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.125
12	10318591	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.588235
12	10318596	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	10318699	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.21875
12	10318703	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	10318715	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	10318719	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.125
12	10318731	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.592593
12	10318785	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	10319970	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0447761
12	10319995	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	10323910	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	10323962	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	10323996	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	10324062	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.108108
12	10324136	A->G	+	ENSG00000134539	KLRD1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	14498895	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.114286
12	14498911	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.047619
12	14498926	A->G	+	ENSG00000171681	ATF7IP	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	27030259	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.0634921
12	27030269	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.0483871
12	27030271	A->G	+	ENSG00000152944	MED21	protein_coding	three_prime_utr	.	.	Alu	0.046875
12	42233550	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.1
12	42233572	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	42233577	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.2
12	42233626	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.25
12	42233692	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	42233695	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	42233716	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	42233725	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	42233786	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	42233794	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	42233912	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.1
12	42233914	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.263158
12	42233926	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	42234071	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	42234084	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.157895
12	42234088	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.263158
12	42234135	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.315789
12	42234944	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.15
12	42234986	A->G	-	ENSG00000015153	YAF2	protein_coding	three_prime_utr	.	.	Alu	0.1
12	43726577	A->G	-	ENSG00000129317	PUS7L	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	43726648	A->G	-	ENSG00000129317	PUS7L	protein_coding	three_prime_utr	.	.	Alu	0.125
12	43787632	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0930233
12	43787801	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.030303
12	43788723	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.315789
12	43788726	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.315789
12	43788740	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0769231
12	43788755	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0930233
12	43788780	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.0289855
12	43788783	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.046875
12	43788808	A->G	+	ENSG00000198001	IRAK4	protein_coding	three_prime_utr	.	.	Alu	0.025974
12	49764502	A->G	+	ENSG00000139644	TMBIM6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
12	50930499	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0327869
12	50930749	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0238095
12	50930782	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0246914
12	50930803	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0365854
12	50930821	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0430108
12	50930865	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.0416667
12	50931460	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.135135
12	50931826	A->G	+	ENSG00000185432	METTL7A	protein_coding	three_prime_utr	.	.	Alu	0.038961
12	53296503	A->G	+	ENSG00000123349	PFDN5	protein_coding	three_prime_utr	.	.	Alu	0.0377358
12	53296509	A->G	+	ENSG00000123349	PFDN5	protein_coding	three_prime_utr	.	.	Alu	0.0333333
12	54235425	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.136364
12	54237962	A->G	-	ENSG00000094916	CBX5	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	59783729	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.384615
12	59783745	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.185185
12	59783751	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.0740741
12	59783752	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	59783860	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.15
12	59783865	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	59784296	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.217391
12	59784347	A->G	+	ENSG00000118596	SLC16A7	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	62335860	A->G	+	ENSG00000135655	USP15	protein_coding	three_prime_utr	.	.	Alu	0.0555556
12	62407766	A->G	+	ENSG00000135655	USP15	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	62414458	A->G	+	ENSG00000135655	USP15	protein_coding	three_prime_utr	.	.	Alu	0.2
12	64448943	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	64448984	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	64449015	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	64449023	A->G	+	ENSG00000184575	XPOT	protein_coding	three_prime_utr	.	.	Alu	0.2
12	66123303	A->G	-	ENSG00000139233	LLPH	protein_coding	three_prime_utr	.	.	Alu	0.0227273
12	66137369	A->G	-	ENSG00000228144	AC078927.1	protein_coding	three_prime_utr	.	.	Alu	1
12	66339350	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.263158
12	66339375	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	66339376	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.217391
12	66339415	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.08
12	66339418	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0833333
12	66339682	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	66343321	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	66343331	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.25
12	66343336	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.102564
12	66343388	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0666667
12	66343389	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.103448
12	66343400	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.2
12	66343410	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.138889
12	66343460	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.185185
12	66343468	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	66343505	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	66343518	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.176471
12	66343532	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.153846
12	66343533	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	66344558	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	66344571	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.125
12	66344615	A->G	+	ENSG00000127311	HELB	protein_coding	three_prime_utr	.	.	Alu	0.181818
12	68843224	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.218391
12	68843233	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.142857
12	68843234	A->G	+	ENSG00000257181	AC025423.4	antisense	three_prime_utr	.	.	Alu	0.0666667
12	68843244	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
12	68843263	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.306818
12	68843273	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.123711
12	68843293	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.159574
12	68843726	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	68843729	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.291667
12	68843730	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.123288
12	68843746	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0945946
12	68843749	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.43038
12	68843754	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.619718
12	68843772	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.154762
12	68843778	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.243902
12	68843847	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0864198
12	68843960	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0522388
12	68843961	A->G	+	ENSG00000135679	MDM2	protein_coding	three_prime_utr	.	.	Alu	0.0671642
12	71702353	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.142857
12	71702788	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.333333
12	71702799	A->G	+	ENSG00000139291	TMEM19	protein_coding	three_prime_utr	.	.	Alu	0.454545
12	71791170	A->G	+	ENSG00000080371	RAB21	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	71791923	A->G	+	ENSG00000080371	RAB21	protein_coding	three_prime_utr	.	.	Alu	0.5
12	71793961	A->G	+	ENSG00000080371	RAB21	protein_coding	three_prime_utr	.	.	Alu	0.2
12	75496052	A->G	+	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.461538
12	75496073	A->G	+	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	75496103	A->G	+	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.411765
12	75496244	A->G	+	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.4
12	75496268	A->G	-	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	75496303	A->G	+	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.307692
12	75496350	A->G	+	ENSG00000139278	GLIPR1	protein_coding	three_prime_utr	.	.	Alu	0.222222
12	93503508	A->G	+	ENSG00000198015	MRPL42	protein_coding	three_prime_utr	.	.	Alu	0.0625
12	93509534	A->G	+	ENSG00000243015	RN7SL737P	misc_RNA	three_prime_utr	.	.	Alu	0.6
12	98548866	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0357143
12	98548912	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	98549132	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.043956
12	98549133	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0322581
12	98549436	A->G	+	ENSG00000120802	TMPO	protein_coding	three_prime_utr	.	.	Alu	0.0410256
12	98733673	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.08
12	98733696	A->G	+	ENSG00000120868	APAF1	protein_coding	three_prime_utr	.	.	Alu	0.125
13	19672244	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0588235
13	19672823	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0384615
13	19672845	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0566038
13	19672892	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0333333
13	19672897	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0307692
13	19672965	A->G	+	ENSG00000196199	MPHOSPH8	protein_coding	three_prime_utr	.	.	Alu	0.0377358
13	21374282	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.03125
13	21374292	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0352941
13	21374301	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0263158
13	21374322	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0266667
13	21374330	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0232558
13	21374371	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0245902
13	21374499	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0243902
13	21375071	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.040404
13	21375108	A->G	-	ENSG00000180776	ZDHHC20	protein_coding	three_prime_utr	.	.	Alu	0.0425532
13	32514573	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.214286
13	32514590	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.214286
13	32514591	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	32515238	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	32515239	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.153846
13	32515316	A->G	-	ENSG00000244754	N4BP2L2	protein_coding	three_prime_utr	.	.	Alu	0.2
13	45030382	A->G	+	ENSG00000223732	AL359706.1	lincRNA	three_prime_utr	.	.	Alu	0.2
13	51448932	A->G	-	ENSG00000102786	INTS6	protein_coding	three_prime_utr	.	.	Alu	0.590909
13	52689919	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.142857
13	52691108	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
13	52691109	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
13	52691112	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
13	52691124	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0540541
13	52691128	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	52691138	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.148148
13	52691181	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
13	52691192	A->G	+	ENSG00000165416	SUGT1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	20366192	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	20366201	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.16129
14	20366224	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	20366228	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.266667
14	20366334	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.6
14	20366356	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.3125
14	20366800	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.222222
14	20366937	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	20367008	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	20367031	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.583333
14	20367876	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
14	20367881	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.4375
14	20367882	A->G	-	ENSG00000129566	TEP1	protein_coding	three_prime_utr	.	.	Alu	0.6875
14	21460331	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.515152
14	21460342	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.466667
14	21460405	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.2
14	21460413	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	21460419	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.615385
14	21460499	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.3
14	21460522	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.4
14	21460698	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.2
14	21460730	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.125
14	21460783	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.1
14	21460901	A->G	-	ENSG00000129472	RAB2B	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	24124720	A->G	+	ENSG00000259371	AL136295.3	protein_coding	three_prime_utr	.	.	Alu	0.0425532
14	24437434	A->G	+	ENSG00000100441	KHNYN	protein_coding	three_prime_utr	.	.	Alu	0.439024
14	31093551	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.4375
14	31093555	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	31093586	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.545455
14	31093588	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	31094036	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31094054	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.444444
14	31094068	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.125
14	31094123	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.105263
14	31094145	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.111111
14	31094148	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.1
14	31094634	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.294118
14	31094655	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	31094656	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.176471
14	31094707	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31095080	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31095146	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.1875
14	31095444	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.647059
14	31095494	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.615385
14	31095496	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	31095628	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	31095658	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	31095680	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.214286
14	31095681	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.357143
14	31095695	A->G	+	ENSG00000100478	AP4S1	protein_coding	three_prime_utr	.	.	Alu	0.2
14	31447738	A->G	-	ENSG00000250365	AL139353.2	antisense	three_prime_utr	.	.	Alu	0.375
14	35050192	A->G	+	ENSG00000151327	FAM177A1	protein_coding	three_prime_utr	.	.	Alu	0.0442478
14	35274203	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.181818
14	35274241	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	35274247	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.363636
14	35277025	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	35277046	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.285714
14	35277287	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	35277288	A->G	+	ENSG00000100890	KIAA0391	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	49577024	A->G	-	ENSG00000213741	RPS29	protein_coding	three_prime_utr	.	.	Alu	0.166667
14	52642959	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.108434
14	52642960	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.103448
14	52642978	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.0684932
14	52643014	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.732143
14	52643017	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.0545455
14	52643092	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.234043
14	52643105	A->G	-	ENSG00000197930	ERO1A	protein_coding	three_prime_utr	.	.	Alu	0.283333
14	52776680	A->G	-	ENSG00000259049	AL139317.3	antisense	three_prime_utr	.	.	Alu	0.181818
14	55367563	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	55367643	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.454545
14	55367697	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.0833333
14	55367700	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.228571
14	55367730	A->G	-	ENSG00000126775	ATG14	protein_coding	three_prime_utr	.	.	Alu	0.307692
14	57413755	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.230769
14	57413756	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	57414150	A->G	+	ENSG00000139977	NAA30	protein_coding	three_prime_utr	.	.	Alu	0.3
14	64483777	A->G	-	ENSG00000089775	ZBTB25	protein_coding	three_prime_utr	.	.	Alu	0.416667
14	64483792	A->G	-	ENSG00000089775	ZBTB25	protein_coding	three_prime_utr	.	.	Alu	0.2
14	64484465	A->G	-	ENSG00000089775	ZBTB25	protein_coding	three_prime_utr	.	.	Alu	0.0714286
14	64484499	A->G	-	ENSG00000089775	ZBTB25	protein_coding	three_prime_utr	.	.	Alu	0.25
14	64934228	A->G	+	ENSG00000258289	CHURC1	protein_coding	three_prime_utr	.	.	Alu	0.0211268
14	67385323	A->G	+	ENSG00000134001	EIF2S1	protein_coding	three_prime_utr	.	.	Alu	0.0851064
14	67385350	A->G	+	ENSG00000134001	EIF2S1	protein_coding	three_prime_utr	.	.	Alu	0.1
14	74200121	A->G	+	ENSG00000205659	LIN52	protein_coding	three_prime_utr	.	.	Alu	1
14	74735802	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
14	74735807	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0625
14	74735922	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.117647
14	74736244	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
14	74736262	A->G	+	ENSG00000119616	FCF1	protein_coding	three_prime_utr	.	.	Alu	0.157895
14	76205243	A->G	+	ENSG00000089916	GPATCH2L	protein_coding	three_prime_utr	.	.	Alu	0.0681818
14	88013173	A->G	+	ENSG00000140030	GPR65	protein_coding	three_prime_utr	.	.	Alu	0.153846
14	88013702	A->G	+	ENSG00000140030	GPR65	protein_coding	three_prime_utr	.	.	Alu	0.272727
14	95415416	A->G	-	ENSG00000176438	SYNE3	protein_coding	three_prime_utr	.	.	Alu	0.190476
15	34231602	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.136364
15	34231679	A->G	-	ENSG00000140199	SLC12A6	protein_coding	three_prime_utr	.	.	Alu	0.0833333
15	41900147	A->G	-	ENSG00000103966	EHD4	protein_coding	three_prime_utr	.	.	Alu	0.292683
15	42531590	A->G	+	ENSG00000092531	SNAP23	protein_coding	three_prime_utr	.	.	Alu	0.206897
15	45598104	A->G	+	ENSG00000104164	BLOC1S6	protein_coding	three_prime_utr	.	.	Alu	0.075
15	49126927	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.100917
15	49127249	A->G	-	ENSG00000166200	COPS2	protein_coding	three_prime_utr	.	.	Alu	0.108108
15	50703085	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	50703158	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.2
15	50704086	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	50704099	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	50705080	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0909091
15	50705098	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.277778
15	50705108	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.153846
15	50705124	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.0769231
15	50705175	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.08
15	50705219	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.125
15	50705254	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	50705258	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	50705259	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.222222
15	50705299	A->G	-	ENSG00000138600	SPPL2A	protein_coding	three_prime_utr	.	.	Alu	0.190476
15	51910303	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.136364
15	51910342	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.0555556
15	51912993	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51912998	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.266667
15	51912999	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	51913005	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.307692
15	51913246	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.6
15	51913739	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.125
15	51914226	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	51914299	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	51914304	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51914305	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.2
15	51914969	A->G	+	ENSG00000138594	TMOD3	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	60422593	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.1875
15	60422594	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	60422701	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.4
15	60422795	A->G	-	ENSG00000128915	ICE2	protein_coding	three_prime_utr	.	.	Alu	0.272727
15	60494976	A->G	-	ENSG00000245534	RORA-AS1	antisense	three_prime_utr	.	.	Alu	0.0540541
15	65117676	A->G	-	ENSG00000090470	PDCD7	protein_coding	three_prime_utr	.	.	Alu	0.0555556
15	66333481	A->G	+	ENSG00000166938	DIS3L	protein_coding	three_prime_utr	.	.	Alu	0.111111
15	72589842	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.272727
15	72590674	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.421053
15	72590722	A->G	+	ENSG00000260534	AC100827.3	sense_overlapping	three_prime_utr	.	.	Alu	0.133333
15	75351340	A->G	+	ENSG00000140398	NEIL1	protein_coding	three_prime_utr	.	.	Alu	0.133333
15	75420458	A->G	-	ENSG00000169375	SIN3A	protein_coding	three_prime_utr	.	.	Alu	0.214286
15	83005297	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.0588235
15	83005472	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.0869565
15	83005521	A->G	-	ENSG00000169609	C15orf40	protein_coding	three_prime_utr	.	.	Alu	0.166667
15	84641585	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.363636
15	84641610	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.25
15	84641611	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.166667
15	84642253	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.181818
15	84642631	A->G	-	ENSG00000277578	RF00017	misc_RNA	three_prime_utr	.	.	Alu	0.125
15	84642805	A->G	-	ENSG00000176700	SCAND2P	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.142857
15	89196044	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.0634921
15	89196045	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.0625
15	89196117	A->G	+	ENSG00000140526	ABHD2	protein_coding	three_prime_utr	.	.	Alu	0.156627
15	90273665	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.25
15	90273890	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	90276177	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90276185	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.2
15	90276186	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.333333
15	90276212	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	90276285	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.181818
15	90276387	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.142857
15	90276423	A->G	+	ENSG00000182768	NGRN	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	11835242	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.125
16	11835278	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.222222
16	11835284	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
16	11835591	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
16	11837235	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
16	11837488	A->G	-	ENSG00000171490	RSL1D1	protein_coding	three_prime_utr	.	.	Alu	0.0242915
16	11871420	A->G	-	ENSG00000263307	AC007216.4	antisense	three_prime_utr	.	.	Alu	0.03125
16	12661063	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.2
16	12663356	A->G	-	ENSG00000103381	CPPED1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	14668632	A->G	+	ENSG00000103429	BFAR	protein_coding	three_prime_utr	.	.	Alu	0.0588235
16	15700333	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
16	15700467	A->G	+	ENSG00000072864	NDE1	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	18784392	A->G	-	ENSG00000134419	RPS15A	protein_coding	three_prime_utr	.	.	Alu	0.727273
16	20856196	A->G	-	ENSG00000188215	DCUN1D3	protein_coding	three_prime_utr	.	.	Alu	0.5
16	21639972	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.181818
16	21639974	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	21640494	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.444444
16	21640506	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.944444
16	21640507	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.833333
16	21640707	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.583333
16	21640710	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	21640720	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.363636
16	21640721	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.272727
16	21641223	A->G	-	ENSG00000140749	IGSF6	protein_coding	three_prime_utr	.	.	Alu	0.0526316
16	23465153	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.112903
16	23465205	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0757576
16	23465213	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0377358
16	23465258	A->G	-	ENSG00000103365	GGA2	protein_coding	three_prime_utr	.	.	Alu	0.0535714
16	27450636	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.115385
16	27450640	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0909091
16	27450664	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.492308
16	27450665	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.640625
16	27450685	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0277778
16	27450701	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0363636
16	27450722	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0727273
16	27450724	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0877193
16	27450728	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0701754
16	27450730	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.166667
16	27451437	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0909091
16	27451513	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0555556
16	27451572	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.075
16	27451596	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0952381
16	27451608	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0540541
16	27451660	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.0697674
16	27451674	A->G	+	ENSG00000259954	IL21R-AS1	antisense	three_prime_utr	.	.	Alu	0.142857
16	28965948	A->G	+	ENSG00000260853	AC109460.2	antisense	three_prime_utr	.	.	Alu	0.0416667
16	29667637	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0566038
16	29667788	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0238095
16	29667815	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0625
16	29668041	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.0746269
16	29668111	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.185484
16	29668184	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.126667
16	29669232	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.3
16	29670031	A->G	+	ENSG00000197471	SPN	protein_coding	three_prime_utr	.	.	Alu	0.020202
16	31090863	A->G	-	ENSG00000255439	AC135050.2	protein_coding	three_prime_utr	.	.	Alu	0.368421
16	31358407	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.0955056
16	31358411	A->G	+	ENSG00000140678	ITGAX	protein_coding	three_prime_utr	.	.	Alu	0.147651
16	48352500	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.117647
16	48352531	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.113636
16	48352579	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0298507
16	48353251	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.06
16	48354392	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	48354398	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.111111
16	48354406	A->G	+	ENSG00000102910	LONP2	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	50673058	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0306748
16	50673293	A->G	-	ENSG00000167208	SNX20	protein_coding	three_prime_utr	.	.	Alu	0.0309278
16	69327795	A->G	-	ENSG00000213380	COG8	protein_coding	three_prime_utr	.	.	Alu	0.2
16	69342339	A->G	+	ENSG00000132603	NIP7	protein_coding	three_prime_utr	.	.	Alu	0.0294118
16	70248664	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0555556
16	70248848	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.15
16	70248889	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.25
16	70249151	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0540541
16	70249182	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0535714
16	70249289	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.147059
16	70249829	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.0465116
16	70249945	A->G	-	ENSG00000223496	EXOSC6	protein_coding	three_prime_utr	.	.	Alu	0.105263
16	70574350	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	70574656	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.148148
16	70574736	A->G	+	ENSG00000189091	SF3B3	protein_coding	three_prime_utr	.	.	Alu	0.0714286
16	74299646	A->G	+	ENSG00000103035	PSMD7	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	75444044	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0612245
16	75445372	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.04
16	75445912	A->G	-	ENSG00000261717	AC009163.4	protein_coding	three_prime_utr	.	.	Alu	0.0888889
16	80980779	A->G	-	ENSG00000103121	CMC2	protein_coding	three_prime_utr	.	.	Alu	0.166667
16	87403158	A->G	+	ENSG00000140941	MAP1LC3B	protein_coding	three_prime_utr	.	.	Alu	1
16	89740391	A->G	+	ENSG00000158805	ZNF276	protein_coding	three_prime_utr	.	.	Alu	0.025
16	89740393	A->G	+	ENSG00000158805	ZNF276	protein_coding	three_prime_utr	.	.	Alu	0.034188
16	89889277	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.153846
16	89889278	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.461538
16	89889295	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	89889358	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.142857
16	89889360	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	89889363	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.214286
16	89889445	A->G	+	ENSG00000141002	TCF25	protein_coding	three_prime_utr	.	.	Alu	0.238095
17	10678058	A->G	-	ENSG00000133028	SCO1	protein_coding	three_prime_utr	.	.	Alu	0.153846
17	10678976	A->G	-	ENSG00000133028	SCO1	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	17186604	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	17186702	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.115385
17	17189269	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	17189306	A->G	+	ENSG00000133030	MPRIP	protein_coding	three_prime_utr	.	.	Alu	0.2
17	27314531	A->G	+	ENSG00000109046	WSB1	protein_coding	three_prime_utr	.	.	Alu	0.307692
17	29551048	A->G	+	ENSG00000160551	TAOK1	protein_coding	three_prime_utr	.	.	Alu	0.0545455
17	30783495	A->G	-	ENSG00000264538	SUZ12P1	transcribed_unprocessed_pseudogene	three_prime_utr	.	.	Alu	0.025
17	30958638	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0816327
17	30958639	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.06
17	30958692	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0410959
17	30958708	A->G	+	ENSG00000184060	ADAP2	protein_coding	three_prime_utr	.	.	Alu	0.0547945
17	31534285	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.769231
17	31534368	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	31534385	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	31534443	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.388889
17	31534452	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.411765
17	31534510	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.380952
17	31534524	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	31534537	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.4
17	31535142	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	31535190	A->G	+	ENSG00000131242	RAB11FIP4	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	32373457	A->G	+	ENSG00000010244	ZNF207	protein_coding	three_prime_utr	.	.	Alu	0.583333
17	35010595	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0229885
17	35010665	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0210526
17	35010738	A->G	-	ENSG00000092871	RFFL	protein_coding	three_prime_utr	.	.	Alu	0.0487805
17	35473948	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.116883
17	35473949	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.415584
17	35473997	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.235294
17	35474007	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	35474015	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.15
17	35474016	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.317073
17	35474051	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.16129
17	35474057	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.625
17	35474061	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.103448
17	35474063	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.241379
17	35474078	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	35474097	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.0408163
17	35474101	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	35474112	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.369565
17	35474113	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.130435
17	35474114	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	35474665	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.0625
17	35474671	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	35474677	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.107143
17	35474678	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	35474732	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.294118
17	35474744	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	35474761	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.315789
17	35474808	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	35474810	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.826087
17	35474820	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	35474832	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.148148
17	35474844	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	35474845	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.185185
17	35474848	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.25
17	35474849	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.296296
17	35474868	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.170732
17	35474869	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.113636
17	35474874	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.208333
17	35474917	A->G	-	ENSG00000205045	SLFN12L	protein_coding	three_prime_utr	.	.	Alu	0.735849
17	37516815	A->G	-	ENSG00000275066	SYNRG	protein_coding	three_prime_utr	.	.	Alu	0.05
17	37517201	A->G	-	ENSG00000275066	SYNRG	protein_coding	three_prime_utr	.	.	Alu	0.529412
17	37517213	A->G	-	ENSG00000275066	SYNRG	protein_coding	three_prime_utr	.	.	Alu	0.3
17	37611904	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.3
17	37612272	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.153846
17	37612304	A->G	-	ENSG00000277688	AC243585.2	antisense	three_prime_utr	.	.	Alu	0.181818
17	37614098	A->G	-	ENSG00000278053	DDX52	protein_coding	three_prime_utr	.	.	Alu	0.05
17	38849886	A->G	-	ENSG00000125691	RPL23	protein_coding	three_prime_utr	.	.	Alu	0.0416667
17	39255587	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39255593	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	39255609	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	39255664	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.133333
17	39255779	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	39255785	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.08
17	39255801	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.222222
17	39255803	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	39256055	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	39256064	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.185185
17	39256095	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.210526
17	39256129	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.12
17	39256234	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39256238	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	39256239	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	39256269	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.25
17	39256999	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	39257003	A->G	-	ENSG00000108306	FBXL20	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	39759159	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.107527
17	39759181	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0289855
17	39759186	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0375
17	39759195	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0634921
17	39759198	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0352941
17	39759236	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0632911
17	39759244	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0843373
17	39759272	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0352941
17	39759292	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0217391
17	39759294	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.131868
17	39759308	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.03125
17	39759316	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.043956
17	39759377	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0660377
17	39759378	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.103774
17	39759380	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.158879
17	39760208	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0740741
17	39760209	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	39760229	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0392157
17	39760233	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.137255
17	39760253	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	39760268	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0882353
17	39760289	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0384615
17	39760294	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39760295	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.109589
17	39760301	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0555556
17	39760321	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0632911
17	39760436	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39760449	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.481481
17	39760453	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	39760457	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	39760462	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.32
17	39760463	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.208333
17	39760506	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39760517	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.105263
17	39760518	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.1
17	39760521	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	39760525	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.238095
17	39760561	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	39760574	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.241379
17	39760575	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.4
17	39760596	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.371429
17	39760597	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.6
17	39760605	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0882353
17	39760619	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	39760888	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0491803
17	39760906	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	39760907	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0652174
17	39760916	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.288889
17	39760921	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.261905
17	39760930	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.104167
17	39760933	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.392157
17	39760934	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0612245
17	39760948	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.170732
17	39760954	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.189189
17	39760966	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.24
17	39760995	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	39761011	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.047619
17	39761041	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0506329
17	39761044	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0266667
17	39761053	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.047619
17	39761058	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.661765
17	39761067	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.163934
17	39761069	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.254237
17	39761070	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0677966
17	39761071	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
17	39761077	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	39761454	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.04
17	39761470	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.151163
17	39761473	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.202381
17	39761474	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.3
17	39761482	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.2
17	39761496	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	39761497	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.060241
17	39761511	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0384615
17	39761517	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0350877
17	39761550	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	39761732	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.106061
17	39761765	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0816327
17	39761777	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0425532
17	39761801	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	39761810	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.05
17	39761816	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
17	39761829	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.129032
17	39761833	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.16
17	39761842	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.217391
17	39761843	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.173913
17	39761886	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.375
17	39761906	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0377358
17	39761923	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.137931
17	39761929	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0327869
17	39761942	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	39761951	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.31746
17	39761972	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0289855
17	39761977	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.211268
17	39761978	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.442857
17	39761991	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.44
17	39761993	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0357143
17	39762630	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.289474
17	39762670	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0576923
17	39762682	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0789474
17	39762683	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0540541
17	39762684	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.368421
17	39762721	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	39763883	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.076087
17	39763887	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0607735
17	39763889	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.120879
17	39763914	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39763916	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.709459
17	39763921	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0208333
17	39763926	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.027972
17	39763951	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.366337
17	39763952	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.785047
17	39763965	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39763982	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0707071
17	39763991	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.116505
17	39763992	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0721649
17	39764008	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.188889
17	39764019	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0481928
17	39764022	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0581395
17	39764023	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0235294
17	39764030	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.021978
17	39764031	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0537634
17	39764032	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.197802
17	39764033	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0568182
17	39764034	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0930233
17	39764037	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.219512
17	39764049	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.263158
17	39764068	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0434783
17	39764101	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.28125
17	39764119	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39764121	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.714286
17	39764122	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	39764127	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.35
17	39764128	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.647059
17	39764207	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.5625
17	39764219	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.558824
17	39764220	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	39764229	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.945946
17	39764243	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0638298
17	39764246	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.152174
17	39764247	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.152174
17	39764281	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.1
17	39764284	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.135135
17	39764299	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.411765
17	39764315	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0493827
17	39764340	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0930233
17	39764344	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0595238
17	39764364	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0229885
17	39764369	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.297619
17	39764382	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.733333
17	39764403	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.117647
17	39764408	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.3125
17	39764418	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.1
17	39764419	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.424658
17	39764451	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.514286
17	39764456	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0571429
17	39764459	A->G	-	ENSG00000161405	IKZF3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	43218118	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	43218119	A->G	+	ENSG00000184988	TMEM106A	protein_coding	three_prime_utr	.	.	Alu	0.272727
17	47118585	A->G	-	ENSG00000004897	CDC27	protein_coding	three_prime_utr	.	.	Alu	0.25
17	48864244	A->G	+	ENSG00000136436	CALCOCO2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	49295182	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	49295202	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.125
17	49295203	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.0909091
17	49296666	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.0714286
17	49296668	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.172414
17	49296708	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	49296739	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.113636
17	49296740	A->G	-	ENSG00000198740	ZNF652	protein_coding	three_prime_utr	.	.	Alu	0.232558
17	49831057	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	49831076	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	49831105	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.125
17	49831155	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.352941
17	49831974	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	49831987	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.111111
17	49832199	A->G	+	ENSG00000136504	KAT7	protein_coding	three_prime_utr	.	.	Alu	0.136364
17	50964371	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.176471
17	50964385	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.294118
17	50964403	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.538462
17	50965027	A->G	-	ENSG00000008294	SPAG9	protein_coding	three_prime_utr	.	.	Alu	0.466667
17	57972463	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.121212
17	57972468	A->G	-	ENSG00000136451	VEZF1	protein_coding	three_prime_utr	.	.	Alu	0.342857
17	62450705	A->G	+	ENSG00000087995	METTL2A	protein_coding	three_prime_utr	.	.	Alu	0.2
17	64321495	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0857143
17	64321514	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0606061
17	64321540	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	64321541	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
17	64321639	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.181818
17	64321649	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
17	64321678	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.16
17	64322091	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.04
17	64322223	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.25
17	64322303	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.2
17	64322323	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.333333
17	64322329	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.214286
17	64322340	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.25
17	64322813	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.04
17	64322966	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.0405405
17	64323007	A->G	-	ENSG00000261371	PECAM1	protein_coding	three_prime_utr	.	.	Alu	0.121622
17	64468469	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	64468472	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.173913
17	64468565	A->G	+	ENSG00000271605	MILR1	protein_coding	three_prime_utr	.	.	Alu	0.12
17	75890120	A->G	-	ENSG00000141569	TRIM65	protein_coding	three_prime_utr	.	.	Alu	0.0857143
17	75943058	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.1875
17	75943114	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	75943126	A->G	-	ENSG00000161533	ACOX1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
17	75944359	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.136364
17	75944755	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.166667
17	75944919	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.136364
17	75944923	A->G	-	ENSG00000267615	AC087289.4	antisense	three_prime_utr	.	.	Alu	0.136364
17	76677143	A->G	-	ENSG00000182534	MXRA7	protein_coding	three_prime_utr	.	.	Alu	0.142857
17	76713226	A->G	-	ENSG00000070495	JMJD6	protein_coding	three_prime_utr	.	.	Alu	0.230769
17	76713258	A->G	-	ENSG00000070495	JMJD6	protein_coding	three_prime_utr	.	.	Alu	0.2
17	76713316	A->G	-	ENSG00000070495	JMJD6	protein_coding	three_prime_utr	.	.	Alu	0.0869565
17	80320383	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.580645
17	80320396	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.09375
17	80320409	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.861111
17	80320453	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.75
17	80320470	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.138889
17	80320479	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.0588235
17	80320570	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.15
17	80320579	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.347826
17	80320590	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.173913
17	80320664	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	1
17	80320912	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.1
17	80320928	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.636364
17	80320932	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	80320942	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.75
17	80320947	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.157895
17	80320958	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.263158
17	80320974	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.3
17	80320975	A->G	+	ENSG00000173821	RNF213	protein_coding	three_prime_utr	.	.	Alu	0.4
17	81563671	A->G	-	ENSG00000182446	NPLOC4	protein_coding	three_prime_utr	.	.	Alu	0.166667
17	81918952	A->G	-	ENSG00000187531	SIRT7	protein_coding	three_prime_utr	.	.	Alu	0.0638298
18	21631689	A->G	+	ENSG00000167088	SNRPD1	protein_coding	three_prime_utr	.	.	Alu	0.333333
18	32070121	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0285714
18	32070180	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0210526
18	32070378	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.025641
18	32070761	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0367647
18	32070804	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0509554
18	32070822	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0298507
18	32070913	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0218978
18	32071154	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0322581
18	32071209	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.031746
18	32071214	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0708661
18	32071301	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0209205
18	32071408	A->G	+	ENSG00000101695	RNF125	protein_coding	three_prime_utr	.	.	Alu	0.0243243
18	36174967	A->G	+	ENSG00000134759	ELP2	protein_coding	three_prime_utr	.	.	Alu	0.1875
18	36885985	A->G	+	ENSG00000150477	KIAA1328	protein_coding	three_prime_utr	.	.	Alu	0.166667
18	58751183	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.0666667
18	58751189	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.0727273
18	58751191	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
18	58751192	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
18	58751245	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.145161
18	58751246	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.125
18	58751410	A->G	+	ENSG00000172175	MALT1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
18	58752185	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.136364
18	58752219	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0694444
18	58752220	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0285714
18	58752517	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0983607
18	58752532	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0392157
18	58752551	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0784314
18	58752578	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0465116
18	58752593	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0512821
18	58752653	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0740741
18	58752703	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0697674
18	58752732	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0816327
18	58752739	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.264151
18	58752760	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0350877
18	58752787	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0555556
18	58752788	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0727273
18	58753226	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.097561
18	58753273	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0638298
18	58753274	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.047619
18	58753311	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.05
18	58753333	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.352941
18	58753335	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.1875
18	58753467	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.0909091
18	58753469	A->G	+	ENSG00000267705	AC104365.3	lincRNA	three_prime_utr	.	.	Alu	0.181818
18	59329953	A->G	-	ENSG00000074695	LMAN1	protein_coding	three_prime_utr	.	.	Alu	0.22973
19	11449647	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	11449660	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	11449774	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0377358
19	11449795	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.0816327
19	11450544	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.145833
19	11450568	A->G	+	ENSG00000130175	PRKCSH	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12078299	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	12079102	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.125
19	12079391	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.6
19	12079396	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.4
19	12079867	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.25
19	12079895	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	12079896	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	12080807	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.2
19	12080883	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	12080893	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	12081018	A->G	+	ENSG00000223547	ZNF844	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	12630415	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.0253165
19	12630445	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.020202
19	12631692	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.028169
19	12632655	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	12632662	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	12632714	A->G	+	ENSG00000173875	ZNF791	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	13759492	A->G	+	ENSG00000104957	CCDC130	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	13759508	A->G	+	ENSG00000104957	CCDC130	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	13773175	A->G	+	ENSG00000037757	MRI1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	14734248	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	14734351	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	14734519	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0754717
19	14734609	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	14735362	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.103448
19	14735363	A->G	-	ENSG00000127507	ADGRE2	protein_coding	three_prime_utr	.	.	Alu	0.0526316
19	16155682	A->G	+	ENSG00000196684	HSH2D	protein_coding	three_prime_utr	.	.	Alu	0.0967742
19	17825792	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0333333
19	17825865	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	17826139	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0253165
19	17826186	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0217391
19	17826218	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0273973
19	17826303	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0392157
19	17826309	A->G	-	ENSG00000105639	JAK3	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	18070682	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0298507
19	18070688	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.227273
19	18070850	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0566038
19	18071002	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0555556
19	18071190	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0408163
19	18071207	A->G	-	ENSG00000096996	IL12RB1	protein_coding	three_prime_utr	.	.	Alu	0.0535714
19	18364350	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18365366	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.1
19	18365604	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	18365624	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.08
19	18365636	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	18366138	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.0810811
19	18366510	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	18366628	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18366705	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	18366731	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	18366733	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	18366745	A->G	+	ENSG00000130517	PGPEP1	protein_coding	three_prime_utr	.	.	Alu	0.25
19	19680361	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	19680362	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0377358
19	19680466	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	19680666	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.1
19	19680734	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	19680901	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	19681426	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.102041
19	19681495	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.2
19	19681496	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.2
19	19681526	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.509434
19	19681536	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.1
19	19681541	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.137255
19	19681588	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0384615
19	19681589	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.027027
19	19681592	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0704225
19	19681603	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.106667
19	19681635	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0543478
19	19682197	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0754717
19	19682268	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.282051
19	19682345	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.139535
19	19682346	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.104167
19	19682359	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.109091
19	19682450	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	19682482	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	19682483	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0571429
19	19682840	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.08
19	19682884	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.08
19	19682900	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.16
19	19682920	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	19682989	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	19683015	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0416667
19	19683065	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0425532
19	19683074	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.0652174
19	19683079	A->G	+	ENSG00000181896	ZNF101	protein_coding	three_prime_utr	.	.	Alu	0.255319
19	19786282	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.230769
19	19786287	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.153846
19	19792224	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.0740741
19	19792245	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.35
19	19792366	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.1875
19	19792376	A->G	-	ENSG00000267581	AC011477.4	lincRNA	three_prime_utr	.	.	Alu	0.1875
19	20198683	A->G	+	ENSG00000267383	AC011447.3	antisense	three_prime_utr	.	.	Alu	0.125
19	20198687	A->G	+	ENSG00000267383	AC011447.3	antisense	three_prime_utr	.	.	Alu	0.117647
19	20543984	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.1
19	20544016	A->G	-	ENSG00000237440	ZNF737	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	21119155	A->G	+	ENSG00000160352	ZNF714	protein_coding	three_prime_utr	.	.	Alu	0.2
19	21184166	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0545455
19	21184172	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.037037
19	21184198	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0508475
19	21184200	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0377358
19	21185480	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0444444
19	21185492	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	21185522	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.0512821
19	21185671	A->G	+	ENSG00000196705	ZNF431	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	21291610	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	21291623	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.185185
19	21291668	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.08
19	21292302	A->G	-	ENSG00000182141	ZNF708	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	21805420	A->G	-	ENSG00000198521	ZNF43	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	29700974	A->G	-	ENSG00000131943	C19orf12	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	29700983	A->G	-	ENSG00000131943	C19orf12	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	29701029	A->G	-	ENSG00000131943	C19orf12	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	35159997	A->G	+	ENSG00000089327	FXYD5	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	36888999	A->G	-	ENSG00000251247	ZNF345	protein_coding	three_prime_utr	.	.	Alu	0.2
19	37245552	A->G	+	ENSG00000188283	ZNF383	protein_coding	three_prime_utr	.	.	Alu	0.2
19	37390129	A->G	+	ENSG00000189164	ZNF527	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	37390281	A->G	+	ENSG00000189164	ZNF527	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	37485461	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.0833333
19	37485463	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.216216
19	37485469	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.459459
19	37485472	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	37485477	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.114286
19	37485521	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.151515
19	37485522	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.257143
19	37485525	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.16129
19	37485526	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	37485532	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	37485561	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	37485563	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	37485596	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.12
19	37485603	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.384615
19	37485606	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.555556
19	37485632	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.5625
19	37485922	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.6
19	37485944	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	37486013	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	37486044	A->G	+	ENSG00000171827	ZNF570	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	38331540	A->G	+	ENSG00000099337	KCNK6	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	38868075	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.08
19	38868111	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.1
19	38868376	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	38868389	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	38868550	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	38868564	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.0645161
19	38869074	A->G	-	ENSG00000187994	RINL	protein_coding	three_prime_utr	.	.	Alu	0.136364
19	41872607	A->G	+	ENSG00000105372	RPS19	protein_coding	three_prime_utr	.	.	Alu	0.121212
19	43496154	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.352941
19	43496252	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	43496261	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	43496287	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	43496288	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	43496529	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.1
19	43496556	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	43496568	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.2
19	43496673	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	43496704	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	43496721	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	43496767	A->G	-	ENSG00000176531	PHLDB3	protein_coding	three_prime_utr	.	.	Alu	0.4
19	45549731	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	45549738	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	45552293	A->G	-	ENSG00000125741	OPA3	protein_coding	three_prime_utr	.	.	Alu	0.1
19	48875174	A->G	+	ENSG00000087074	PPP1R15A	protein_coding	three_prime_utr	.	.	Alu	0.0363636
19	49481945	A->G	+	ENSG00000269469	AC010619.1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	49482219	A->G	+	ENSG00000269469	AC010619.1	protein_coding	three_prime_utr	.	.	Alu	0.15
19	49521798	A->G	+	ENSG00000104870	FCGRT	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	52031753	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.125
19	52032687	A->G	-	ENSG00000256087	ZNF432	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	52154626	A->G	-	ENSG00000267827	AC011468.2	processed_transcript	three_prime_utr	.	.	Alu	0.5
19	52556182	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	52556196	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.3
19	52556375	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.318182
19	52556401	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	52556552	A->G	+	ENSG00000198482	ZNF808	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	52839027	A->G	-	ENSG00000204604	ZNF468	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	53354973	A->G	+	ENSG00000213799	ZNF845	protein_coding	three_prime_utr	.	.	Alu	0.230769
19	53354976	A->G	+	ENSG00000213799	ZNF845	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	53354981	A->G	+	ENSG00000213799	ZNF845	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	54180099	A->G	-	ENSG00000125505	MBOAT7	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	54216448	A->G	-	ENSG00000204577	LILRB3	protein_coding	three_prime_utr	.	.	Alu	0.0625
19	54237097	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.102564
19	54237106	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.119048
19	54237118	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.195652
19	54237180	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.285714
19	54237183	A->G	-	ENSG00000244482	LILRA6	protein_coding	three_prime_utr	.	.	Alu	0.115385
19	54889984	A->G	+	ENSG00000186431	FCAR	protein_coding	three_prime_utr	.	.	Alu	0.0285714
19	54890054	A->G	+	ENSG00000186431	FCAR	protein_coding	three_prime_utr	.	.	Alu	0.0209059
19	54913076	A->G	+	ENSG00000189430	NCR1	protein_coding	three_prime_utr	.	.	Alu	0.272727
19	54913109	A->G	+	ENSG00000189430	NCR1	protein_coding	three_prime_utr	.	.	Alu	0.818182
19	55661834	A->G	+	ENSG00000063244	U2AF2	protein_coding	three_prime_utr	.	.	Alu	0.916667
19	57214491	A->G	+	ENSG00000083844	ZNF264	protein_coding	three_prime_utr	.	.	Alu	0.0666667
19	57757750	A->G	+	ENSG00000152443	ZNF776	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57845025	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	57845076	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57845077	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.333333
19	57845110	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	57845156	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.190476
19	57845172	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.277778
19	57845758	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	57845888	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57845896	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57845900	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.7
19	57845918	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57845950	A->G	+	ENSG00000268750	AC010522.1	protein_coding	three_prime_utr	.	.	Alu	0.153846
19	57860381	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.103448
19	57860469	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.214286
19	57860478	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.172414
19	57860489	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.125
19	57860504	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0909091
19	57860631	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57860673	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.36
19	57860680	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.833333
19	57860701	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.521739
19	57860997	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.105263
19	57861355	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.5
19	57861356	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57861379	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.111111
19	57861384	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.235294
19	57861395	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.125
19	57861400	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.269231
19	57861448	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.151515
19	57861460	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0235294
19	57861468	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0238095
19	57861563	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	57861817	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0315789
19	57861827	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0217391
19	57861828	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0425532
19	57861847	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0441176
19	57861872	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0487805
19	57861909	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57861911	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.15
19	57861915	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0869565
19	57862017	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.08
19	57862034	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.103448
19	57862035	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.137931
19	57862036	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0714286
19	57862048	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0588235
19	57863051	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57863081	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.25
19	57863275	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	57863338	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0952381
19	57863378	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.0769231
19	57863390	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.08
19	57863781	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57863789	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.368421
19	57863790	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.166667
19	57863833	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	57863878	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57863896	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3
19	57863992	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.307692
19	57864014	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.133333
19	57864334	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.2
19	57864339	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.416667
19	57864368	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.263158
19	57864375	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.3125
19	57864393	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.238095
19	57864406	A->G	+	ENSG00000204514	ZNF814	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	57907086	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.176471
19	57907087	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.222222
19	57907124	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.375
19	57907125	A->G	-	ENSG00000269476	AC010326.2	protein_coding	three_prime_utr	.	.	Alu	0.375
19	58127268	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.130435
19	58127338	A->G	-	ENSG00000181894	ZNF329	protein_coding	three_prime_utr	.	.	Alu	0.117647
19	58298559	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	58298560	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.181818
19	58298911	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.142857
19	58298940	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.2
19	58299042	A->G	+	ENSG00000283515	AC020915.5	protein_coding	three_prime_utr	.	.	Alu	0.2
20	18487734	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	18487769	A->G	-	ENSG00000089050	RBBP9	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	25046129	A->G	-	ENSG00000154930	ACSS1	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	31538972	A->G	+	ENSG00000101294	HM13	protein_coding	three_prime_utr	.	.	Alu	0.26087
20	31539675	A->G	+	ENSG00000101294	HM13	protein_coding	three_prime_utr	.	.	Alu	0.285714
20	36892556	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.190476
20	36892574	A->G	-	ENSG00000101342	TLDC2	protein_coding	three_prime_utr	.	.	Alu	0.2
20	38129483	A->G	-	ENSG00000198959	TGM2	protein_coding	three_prime_utr	.	.	Alu	0.222222
20	45077504	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0231023
20	45078237	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0392157
20	45078286	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.037037
20	45079064	A->G	+	ENSG00000101109	STK4	protein_coding	three_prime_utr	.	.	Alu	0.0381356
20	50120782	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	three_prime_utr	.	.	Alu	0.3
20	50122523	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	three_prime_utr	.	.	Alu	0.153846
20	50122537	A->G	-	ENSG00000124208	TMEM189-UBE2V1	protein_coding	three_prime_utr	.	.	Alu	0.230769
20	50876806	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.0869565
20	50877626	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	50878012	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.181818
20	50878201	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.416667
20	50878409	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	50878431	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.333333
20	50881213	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.384615
20	50882068	A->G	+	ENSG00000124243	BCAS4	protein_coding	three_prime_utr	.	.	Alu	0.166667
20	56460327	A->G	+	ENSG00000087589	CASS4	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	33263899	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.36
21	33264059	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.0571429
21	33264081	A->G	+	ENSG00000223799	IL10RB-DT	antisense	three_prime_utr	.	.	Alu	0.0714286
21	33355754	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0526316
21	33355756	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
21	33355762	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.166667
21	33355789	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
21	33355807	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
21	33355909	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
21	33355968	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.1
21	33357713	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	33357727	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.333333
21	33357789	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.285714
21	33357790	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.428571
21	33357802	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.416667
21	33358727	A->G	+	ENSG00000142166	IFNAR1	protein_coding	three_prime_utr	.	.	Alu	0.0625
21	33450422	A->G	-	ENSG00000142188	TMEM50B	protein_coding	three_prime_utr	.	.	Alu	0.0480769
21	42909743	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.416667
21	42909760	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.7
21	42909849	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.416667
21	42909870	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.2
21	42909884	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.272727
21	42909887	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.533333
21	42909937	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.75
21	42909948	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.380952
21	42910141	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	42910143	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.636364
21	42911571	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.181818
21	42911607	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.4
21	42911608	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.285714
21	42911665	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.230769
21	42911666	A->G	+	ENSG00000160194	NDUFV3	protein_coding	three_prime_utr	.	.	Alu	0.153846
21	44224579	A->G	-	ENSG00000160223	ICOSLG	protein_coding	three_prime_utr	.	.	Alu	0.526316
21	44224589	A->G	-	ENSG00000160223	ICOSLG	protein_coding	three_prime_utr	.	.	Alu	0.421053
21	44224636	A->G	-	ENSG00000160223	ICOSLG	protein_coding	three_prime_utr	.	.	Alu	0.157895
22	17110242	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.03125
22	17110248	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.02
22	17110289	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0384615
22	17110322	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0258621
22	17110339	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0220588
22	17110404	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0410959
22	17110419	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.037037
22	17110430	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0638298
22	17110551	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0434783
22	17110684	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.027027
22	17113215	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.393939
22	17113216	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.212121
22	17113247	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.517241
22	17113258	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	17113261	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0869565
22	17113268	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.125
22	17113273	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0645161
22	17113287	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	17113311	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.108108
22	17113342	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0714286
22	17113373	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0769231
22	17113382	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0952381
22	17113383	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.409091
22	17113397	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	17113419	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0571429
22	17113432	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0652174
22	17113436	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0540541
22	17113471	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.254902
22	17113480	A->G	+	ENSG00000177663	IL17RA	protein_coding	three_prime_utr	.	.	Alu	0.0363636
22	17116948	A->G	-	ENSG00000183307	TMEM121B	protein_coding	three_prime_utr	.	.	Alu	0.266667
22	17181086	A->G	-	ENSG00000093072	ADA2	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	18088524	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.08
22	18097788	A->G	+	ENSG00000215193	PEX26	protein_coding	three_prime_utr	.	.	Alu	0.2
22	21685656	A->G	+	ENSG00000100023	PPIL2	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	21685711	A->G	+	ENSG00000100023	PPIL2	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	25724961	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	25724994	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.3
22	25725026	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.3
22	25725027	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.6
22	25725031	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.454545
22	25725099	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.3125
22	25725118	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.1
22	25725119	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.421053
22	25725700	A->G	+	ENSG00000100077	GRK3	protein_coding	three_prime_utr	.	.	Alu	0.2
22	26522897	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.230769
22	26523142	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	26523183	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	26523677	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	26523681	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	26523682	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	26523761	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.272727
22	26523762	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.136364
22	26523763	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	26523764	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.428571
22	26523767	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.166667
22	26523786	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.176471
22	26523801	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.133333
22	26523855	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.1
22	26524398	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.25
22	26524471	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.125
22	26525260	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0645161
22	26525261	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.129032
22	26525381	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0444444
22	26525393	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.05
22	26525396	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.0789474
22	26525415	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.09375
22	26525417	A->G	-	ENSG00000128294	TPST2	protein_coding	three_prime_utr	.	.	Alu	0.151515
22	29506677	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.533333
22	29506887	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	29507126	A->G	-	ENSG00000100296	THOC5	protein_coding	three_prime_utr	.	.	Alu	0.181818
22	30661486	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.142857
22	30662707	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.214286
22	30662798	A->G	-	ENSG00000100036	SLC35E4	protein_coding	three_prime_utr	.	.	Alu	0.6
22	35331326	A->G	+	ENSG00000100284	TOM1	protein_coding	three_prime_utr	.	.	Alu	0.285714
22	35659789	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0224719
22	35659791	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0227273
22	35659793	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.714286
22	35659845	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.025
22	35659860	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.164384
22	35659865	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.027027
22	35659866	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.486486
22	35659869	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.337662
22	35659870	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.038961
22	35659883	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0447761
22	35659891	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.118644
22	35659932	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.119266
22	35659940	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.257353
22	35659956	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0469799
22	35660002	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.112281
22	35660344	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.073913
22	35660345	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.177273
22	35660362	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.24812
22	35660363	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.358779
22	35660431	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0696864
22	35660444	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.589041
22	35660445	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.47331
22	35660446	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.131206
22	35660460	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0899281
22	35660497	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0510949
22	35660499	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.149091
22	35660543	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0507246
22	35660551	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.931655
22	35660583	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0925926
22	35660685	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.490196
22	35660703	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.142405
22	35661199	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0340909
22	35661207	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0694444
22	35661264	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	35661270	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.0909091
22	35661279	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.138889
22	35661283	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.102564
22	35661290	A->G	+	ENSG00000221963	APOL6	protein_coding	three_prime_utr	.	.	Alu	0.05
22	37775528	A->G	+	ENSG00000100106	TRIOBP	protein_coding	three_prime_utr	.	.	Alu	0.117647
22	37775576	A->G	+	ENSG00000100106	TRIOBP	protein_coding	three_prime_utr	.	.	Alu	0.0833333
22	39018725	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0425532
22	39018756	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0444444
22	39018881	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.0555556
22	39019540	A->G	+	ENSG00000244509	APOBEC3C	protein_coding	three_prime_utr	.	.	Alu	0.05
22	41599256	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.625
22	41599288	A->G	-	ENSG00000100418	DESI1	protein_coding	three_prime_utr	.	.	Alu	0.347826
22	41922382	A->G	-	ENSG00000159958	TNFRSF13C	protein_coding	three_prime_utr	.	.	Alu	0.178571
22	41922412	A->G	-	ENSG00000159958	TNFRSF13C	protein_coding	three_prime_utr	.	.	Alu	0.125
22	42383533	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.16129
22	42383534	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.206897
22	42383618	A->G	-	ENSG00000235568	NFAM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
22	45193983	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.565217
22	45194408	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.583333
22	45194413	A->G	-	ENSG00000100364	KIAA0930	protein_coding	three_prime_utr	.	.	Alu	0.545455
1	100024063	A->G	+	ENSG00000117620	SLC35A3	protein_coding	three_prime_utr	.	.	Alu	0.4375
1	109594844	A->G	+	ENSG00000065135	GNAI3	protein_coding	three_prime_utr	.	.	Alu	0.0384615
1	109596415	A->G	+	ENSG00000225113	AL355310.1	sense_overlapping	three_prime_utr	.	.	Alu	0.3
1	109596589	A->G	+	ENSG00000225113	AL355310.1	sense_overlapping	three_prime_utr	.	.	Alu	0.272727
1	109597035	A->G	+	ENSG00000225113	AL355310.1	sense_overlapping	three_prime_utr	.	.	Alu	0.538462
1	109597036	A->G	+	ENSG00000225113	AL355310.1	sense_overlapping	three_prime_utr	.	.	Alu	0.615385
1	109597419	A->G	+	ENSG00000225113	AL355310.1	sense_overlapping	three_prime_utr	.	.	Alu	0.727273
1	145745212	A->G	-	ENSG00000265491	RNF115	protein_coding	three_prime_utr	.	.	Alu	0.04
1	145923201	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	145925497	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.0555556
1	145925523	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.117647
1	145925524	A->G	-	ENSG00000265241	RBM8A	protein_coding	three_prime_utr	.	.	Alu	0.125
1	149555580	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	149555610	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.695652
1	149555673	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.6875
1	149555674	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.722222
1	149555744	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.0888889
1	149555749	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.15
1	149555762	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.653846
1	149555763	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.925926
1	149555766	A->G	+	ENSG00000271383	NBPF19	protein_coding	three_prime_utr	.	.	Alu	0.375
1	150308622	A->G	+	ENSG00000266472	MRPS21	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	150731007	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.062069
1	150731018	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.105991
1	150731344	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0360825
1	150732032	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.0431034
1	150732161	A->G	-	ENSG00000163131	CTSS	protein_coding	three_prime_utr	.	.	Alu	0.021978
1	151118851	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	1
1	151118856	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	1
1	151118858	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	151118867	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.285714
1	151119132	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.08
1	151119158	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	151119175	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.176471
1	151119185	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.470588
1	151119201	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151119249	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.294118
1	151119278	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	151119285	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	151119289	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.210526
1	151119291	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.375
1	151119304	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.416667
1	151119403	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	151119417	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	151119418	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	151119433	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.454545
1	151119442	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	151119468	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	151119679	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	151119687	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.3
1	151119688	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.636364
1	151120177	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151120218	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151120280	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.727273
1	151120288	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.3
1	151120289	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	151120475	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	151120516	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
1	151121643	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151121672	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	151121681	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.352941
1	151121699	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.222222
1	151121700	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	151123334	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151123589	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.266667
1	151123669	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	151123686	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.2
1	151124001	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	151124261	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151124262	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.235294
1	151124279	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.125
1	151124291	A->G	+	ENSG00000143458	GABPB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	151874437	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.030303
1	151874490	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.08
1	151874513	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.047619
1	151874654	A->G	-	ENSG00000159445	THEM4	protein_coding	three_prime_utr	.	.	Alu	0.0408163
1	155881828	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.05
1	155881854	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0888889
1	155881938	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.0645161
1	155881963	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.157895
1	155881991	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.1
1	155882003	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	155883378	A->G	+	ENSG00000132718	SYT11	protein_coding	three_prime_utr	.	.	Alu	0.111111
1	156722834	A->G	-	ENSG00000143319	ISG20L2	protein_coding	three_prime_utr	.	.	Alu	0.021978
1	160486151	A->G	-	ENSG00000162739	SLAMF6	protein_coding	three_prime_utr	.	.	Alu	0.136364
1	160486153	A->G	-	ENSG00000162739	SLAMF6	protein_coding	three_prime_utr	.	.	Alu	0.113636
1	160486154	A->G	-	ENSG00000162739	SLAMF6	protein_coding	three_prime_utr	.	.	Alu	0.0681818
1	160996502	A->G	-	ENSG00000158769	F11R	protein_coding	three_prime_utr	.	.	Alu	0.0277778
1	168244440	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0277778
1	168251299	A->G	+	ENSG00000213064	SFT2D2	protein_coding	three_prime_utr	.	.	Alu	0.0338983
1	173898490	A->G	+	ENSG00000185278	ZBTB37	protein_coding	three_prime_utr	.	.	Alu	0.230769
1	173898524	A->G	+	ENSG00000185278	ZBTB37	protein_coding	three_prime_utr	.	.	Alu	0.5
1	179073347	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.45
1	179073678	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	179073770	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179075198	A->G	+	ENSG00000116199	FAM20B	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	179357283	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.125
1	179357303	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.5
1	179357320	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	179357332	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.25
1	179357364	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.4
1	179357369	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.105263
1	179357475	A->G	+	ENSG00000057252	SOAT1	protein_coding	three_prime_utr	.	.	Alu	0.166667
1	179860449	A->G	-	ENSG00000169905	TOR1AIP2	protein_coding	three_prime_utr	.	.	Alu	0.5
1	179920390	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	179920393	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	three_prime_utr	.	.	Alu	0.2
1	179920429	A->G	+	ENSG00000143337	TOR1AIP1	protein_coding	three_prime_utr	.	.	Alu	0.142857
1	184792173	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0434783
1	184793434	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0277778
1	184793474	A->G	-	ENSG00000135842	FAM129A	protein_coding	three_prime_utr	.	.	Alu	0.0273973
1	202582644	A->G	+	ENSG00000077157	PPP1R12B	protein_coding	three_prime_utr	.	.	Alu	0.153846
1	203775346	A->G	+	ENSG00000122188	LAX1	protein_coding	three_prime_utr	.	.	Alu	0.0740741
1	203776113	A->G	+	ENSG00000122188	LAX1	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	205769494	A->G	-	ENSG00000117280	RAB29	protein_coding	three_prime_utr	.	.	Alu	0.0201342
1	220058717	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.133333
1	220058756	A->G	-	ENSG00000162813	BPNT1	protein_coding	three_prime_utr	.	.	Alu	0.272727
1	225983579	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0272727
1	225984125	A->G	-	ENSG00000143751	SDE2	protein_coding	three_prime_utr	.	.	Alu	0.0263158
1	228177583	A->G	+	ENSG00000181873	IBA57	protein_coding	three_prime_utr	.	.	Alu	0.181818
1	228180077	A->G	+	ENSG00000181873	IBA57	protein_coding	three_prime_utr	.	.	Alu	0.363636
1	228180141	A->G	+	ENSG00000181873	IBA57	protein_coding	three_prime_utr	.	.	Alu	0.2
1	228180746	A->G	+	ENSG00000181873	IBA57	protein_coding	three_prime_utr	.	.	Alu	0.2
1	228180893	A->G	+	ENSG00000181873	IBA57	protein_coding	three_prime_utr	.	.	Alu	0.277778
1	247878052	A->G	+	ENSG00000162722	TRIM58	protein_coding	three_prime_utr	.	.	Alu	0.0588235
2	101271413	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.025974
2	101271462	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0247934
2	101271510	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0206897
2	101271550	A->G	-	ENSG00000163162	RNF149	protein_coding	three_prime_utr	.	.	Alu	0.0211268
2	112531049	A->G	+	ENSG00000114999	TTL	protein_coding	three_prime_utr	.	.	Alu	0.08
2	112576795	A->G	+	ENSG00000125630	POLR1B	protein_coding	three_prime_utr	.	.	Alu	0.3
2	112576796	A->G	+	ENSG00000125630	POLR1B	protein_coding	three_prime_utr	.	.	Alu	0.2
2	112576829	A->G	+	ENSG00000125630	POLR1B	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	113203798	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	113205188	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	113205190	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	113205202	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	113205203	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	113205229	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.25
2	113205230	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.423077
2	113205242	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.685714
2	113205366	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.533333
2	113205374	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.8125
2	113205375	A->G	+	ENSG00000125637	PSD4	protein_coding	three_prime_utr	.	.	Alu	0.8125
2	128193273	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	128193937	A->G	+	ENSG00000136731	UGGT1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	130159538	A->G	-	ENSG00000136699	SMPD4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	130159555	A->G	-	ENSG00000136699	SMPD4	protein_coding	three_prime_utr	.	.	Alu	0.2
2	130159594	A->G	-	ENSG00000136699	SMPD4	protein_coding	three_prime_utr	.	.	Alu	0.7
2	130374420	A->G	+	ENSG00000072135	PTPN18	protein_coding	three_prime_utr	.	.	Alu	0.0263158
2	151477495	A->G	+	ENSG00000080345	RIF1	protein_coding	three_prime_utr	.	.	Alu	0.25
2	152120296	A->G	-	ENSG00000115145	STAM2	protein_coding	three_prime_utr	.	.	Alu	0.571429
2	159770082	A->G	-	ENSG00000136536	7-Mar	protein_coding	three_prime_utr	.	.	Alu	0.5
2	175924645	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.1875
2	175924750	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.782609
2	175926454	A->G	-	ENSG00000144320	LNPK	protein_coding	three_prime_utr	.	.	Alu	0.4
2	177219923	A->G	+	ENSG00000170144	HNRNPA3	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	190933943	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.060241
2	190934866	A->G	+	ENSG00000115419	GLS	protein_coding	three_prime_utr	.	.	Alu	0.370787
2	200826817	A->G	+	ENSG00000082153	BZW1	protein_coding	three_prime_utr	.	.	Alu	0.0843373
2	200978643	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.142857
2	200978647	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.0952381
2	200978650	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.136364
2	200978655	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.0909091
2	200978656	A->G	-	ENSG00000183308	AC005037.1	antisense	three_prime_utr	.	.	Alu	0.421053
2	201154281	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.1
2	201154341	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	201164041	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0483871
2	201164087	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0363636
2	201164174	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0218978
2	201165370	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.031746
2	201165400	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.09375
2	201165410	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0322581
2	201165412	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0333333
2	201165428	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0384615
2	201165436	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.031746
2	201165445	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0517241
2	201165451	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.111111
2	201165481	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0888889
2	201165515	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	201165533	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0666667
2	201165534	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.266667
2	201165546	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	201165555	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	201173616	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.125
2	201173703	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	201173935	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	201174583	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	201174603	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	201174618	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.6
2	201174619	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.2
2	201175414	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.230769
2	201175418	A->G	+	ENSG00000003402	CFLAR	protein_coding	three_prime_utr	.	.	Alu	0.272727
2	201217939	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0517241
2	201218043	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0512821
2	201219014	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0454545
2	201219036	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0344828
2	201219093	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0350877
2	201219252	A->G	+	ENSG00000003400	CASP10	protein_coding	three_prime_utr	.	.	Alu	0.0769231
2	201286666	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.125
2	201286881	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	201287275	A->G	+	ENSG00000064012	CASP8	protein_coding	three_prime_utr	.	.	Alu	0.1
2	202880336	A->G	-	ENSG00000138442	WDR12	protein_coding	three_prime_utr	.	.	Alu	0.2
2	203297388	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	203297404	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.2
2	203297449	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	203297450	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.333333
2	203297524	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.153846
2	203297682	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	203297906	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.142857
2	203297935	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.125
2	203298130	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	203305460	A->G	+	ENSG00000119004	CYP20A1	protein_coding	three_prime_utr	.	.	Alu	0.15
2	203735962	A->G	+	ENSG00000178562	CD28	protein_coding	three_prime_utr	.	.	Alu	0.0236686
2	206122595	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.315789
2	206122616	A->G	-	ENSG00000023228	NDUFS1	protein_coding	three_prime_utr	.	.	Alu	0.833333
2	207754527	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.130435
2	207754528	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.208333
2	207754807	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.647059
2	207754861	A->G	+	ENSG00000284079	MIR4775	miRNA	three_prime_utr	.	.	Alu	0.4
2	207755016	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.166667
2	207755050	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
2	207755351	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
2	207755405	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.6875
2	207755419	A->G	+	ENSG00000163249	CCNYL1	protein_coding	three_prime_utr	.	.	Alu	0.65
2	216038707	A->G	-	ENSG00000115425	PECR	protein_coding	three_prime_utr	.	.	Alu	0.181818
2	216038759	A->G	-	ENSG00000115425	PECR	protein_coding	three_prime_utr	.	.	Alu	0.0625
2	219075484	A->G	-	ENSG00000187736	NHEJ1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
2	219075490	A->G	-	ENSG00000187736	NHEJ1	protein_coding	three_prime_utr	.	.	Alu	0.08
2	219075512	A->G	-	ENSG00000187736	NHEJ1	protein_coding	three_prime_utr	.	.	Alu	0.117647
2	233205623	A->G	+	ENSG00000168918	INPP5D	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	101766954	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.125
3	101766955	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	101766956	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	101767027	A->G	+	ENSG00000182504	CEP97	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	101823520	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	101823545	A->G	+	ENSG00000144815	NXPE3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	101823930	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0909091
3	101823931	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.0909091
3	101824379	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.2
3	101824452	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.1
3	101824467	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.125
3	101824542	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.181818
3	101824588	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.2
3	101824592	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.2
3	101824644	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.153846
3	101824678	A->G	+	ENSG00000249474	AC020651.1	antisense	three_prime_utr	.	.	Alu	0.142857
3	128071406	A->G	+	ENSG00000175792	RUVBL1	protein_coding	three_prime_utr	.	.	Alu	0.138298
3	138161807	A->G	-	ENSG00000138231	DBR1	protein_coding	three_prime_utr	.	.	Alu	0.028169
3	141946808	A->G	-	ENSG00000114126	TFDP2	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	142160857	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.0952381
3	142160922	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.1
3	142160954	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.125
3	142161225	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	142161296	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	142161833	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.0869565
3	142161988	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	142162046	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142162067	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.117647
3	142162079	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.294118
3	142162747	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.5
3	142162753	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.214286
3	142162754	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.357143
3	142162772	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.285714
3	142162830	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.444444
3	142162833	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	142162839	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.466667
3	142162866	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.3
3	142163452	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	142163453	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	142163454	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.454545
3	142163468	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.25
3	142163488	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.3
3	142163519	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	142163537	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142163542	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.190476
3	142163751	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.133333
3	142163778	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.368421
3	142163779	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.157895
3	142163799	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.111111
3	142163824	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.136364
3	142163830	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.565217
3	142184720	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.181818
3	142184753	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.294118
3	142184754	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.176471
3	142184829	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.166667
3	142185168	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.272727
3	142185201	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142185240	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.142857
3	142185331	A->G	-	ENSG00000175066	GK5	protein_coding	three_prime_utr	.	.	Alu	0.25
3	150627664	A->G	+	ENSG00000198843	SELENOT	protein_coding	three_prime_utr	.	.	Alu	0.1875
3	156540457	A->G	-	ENSG00000114850	SSR3	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	161073083	A->G	+	ENSG00000163590	PPM1L	protein_coding	three_prime_utr	.	.	Alu	0.714286
3	170089699	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.0666667
3	170089835	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.12
3	170092022	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.1
3	170092062	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.0526316
3	170092067	A->G	-	ENSG00000173889	PHC3	protein_coding	three_prime_utr	.	.	Alu	0.105263
3	179337584	A->G	+	ENSG00000121864	ZNF639	protein_coding	three_prime_utr	.	.	Alu	0.2
3	179397623	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.114286
3	179397934	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.3
3	179397975	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.2
3	179398428	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.3
3	179398501	A->G	-	ENSG00000242539	AC007620.2	antisense	three_prime_utr	.	.	Alu	0.2
3	179399225	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.037037
3	179399250	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0434783
3	179399475	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0377358
3	179399476	A->G	-	ENSG00000114450	GNB4	protein_coding	three_prime_utr	.	.	Alu	0.0555556
3	188879039	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.514286
3	188880270	A->G	+	ENSG00000145012	LPP	protein_coding	three_prime_utr	.	.	Alu	0.833333
3	195527806	A->G	-	ENSG00000184203	PPP1R2	protein_coding	three_prime_utr	.	.	Alu	0.0625
3	196352513	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.153846
3	196353002	A->G	-	ENSG00000163960	UBXN7	protein_coding	three_prime_utr	.	.	Alu	0.129032
3	197784540	A->G	+	ENSG00000122068	FYTTD1	protein_coding	three_prime_utr	.	.	Alu	0.2
4	102753853	A->G	-	ENSG00000109323	MANBA	protein_coding	three_prime_utr	.	.	Alu	0.0689655
4	123316032	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.2
4	123316054	A->G	+	ENSG00000145375	SPATA5	protein_coding	three_prime_utr	.	.	Alu	0.125
4	139045616	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0204082
4	139045646	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0272727
4	139045698	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0258621
4	139045701	A->G	+	ENSG00000151014	NOCT	protein_coding	three_prime_utr	.	.	Alu	0.0363636
4	152622853	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.166667
4	152622904	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.5
4	152622909	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.307692
4	152622939	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.4
4	152622981	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.666667
4	152622985	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	152622988	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.461538
4	152623049	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.153846
4	152623068	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.125
4	152623662	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.235294
4	152623683	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.75
4	152623687	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.625
4	152624382	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	152624428	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	152624479	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	152624493	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0740741
4	152624562	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.157895
4	152625518	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.133333
4	152625540	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0666667
4	152625575	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0555556
4	152625598	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0857143
4	152625608	A->G	-	ENSG00000170006	TMEM154	protein_coding	three_prime_utr	.	.	Alu	0.0769231
4	165076867	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.142857
4	165077073	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.333333
4	165077074	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.230769
4	165077484	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.125
4	165077540	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.117647
4	165077542	A->G	-	ENSG00000170088	TMEM192	protein_coding	three_prime_utr	.	.	Alu	0.2
4	176330020	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.058104
4	176331087	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.314815
4	176331099	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0509554
4	176331175	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.398305
4	176331176	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.588235
4	176331183	A->G	+	ENSG00000129128	SPCS3	protein_coding	three_prime_utr	.	.	Alu	0.0820896
5	115206036	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.3
5	115206616	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.923077
5	115206632	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.416667
5	115206780	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.294118
5	115206791	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	115207624	A->G	-	ENSG00000164219	PGGT1B	protein_coding	three_prime_utr	.	.	Alu	0.666667
5	115830603	A->G	-	ENSG00000145782	ATG12	protein_coding	three_prime_utr	.	.	Alu	0.0283019
5	119394816	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.173913
5	119394841	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.0769231
5	119394842	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.0769231
5	119394869	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.285714
5	119396737	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	119396807	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.4
5	119396915	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.2
5	119396922	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	119396935	A->G	+	ENSG00000145779	TNFAIP8	protein_coding	three_prime_utr	.	.	Alu	0.133333
5	122027184	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.206897
5	122027265	A->G	+	ENSG00000151304	SRFBP1	protein_coding	three_prime_utr	.	.	Alu	0.08
5	126625557	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.08
5	126625727	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	126626836	A->G	+	ENSG00000164902	PHAX	protein_coding	three_prime_utr	.	.	Alu	0.142857
5	131201136	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.125
5	131201259	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.130435
5	131201640	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	131202544	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.105263
5	131202559	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.125
5	131202575	A->G	+	ENSG00000186687	LYRM7	protein_coding	three_prime_utr	.	.	Alu	0.2
5	131953357	A->G	-	ENSG00000234758	AC034228.3	antisense	three_prime_utr	.	.	Alu	0.272727
5	131953363	A->G	-	ENSG00000234758	AC034228.3	antisense	three_prime_utr	.	.	Alu	1
5	131953409	A->G	-	ENSG00000234758	AC034228.3	antisense	three_prime_utr	.	.	Alu	0.133333
5	134155855	A->G	-	ENSG00000113558	SKP1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
5	134402194	A->G	-	ENSG00000237190	CDKN2AIPNL	protein_coding	three_prime_utr	.	.	Alu	0.0540541
5	143225353	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.333333
5	143225363	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.263158
5	143225441	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.241379
5	143225450	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.0588235
5	143225451	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.117647
5	143225871	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.111111
5	143226218	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.125
5	143226224	A->G	+	ENSG00000145819	ARHGAP26	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	149983749	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.185185
5	149983860	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0666667
5	149984382	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	149984410	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.176471
5	149984504	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.08
5	149984581	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	149984582	A->G	+	ENSG00000155850	SLC26A2	protein_coding	three_prime_utr	.	.	Alu	0.0869565
5	150402141	A->G	-	ENSG00000019582	CD74	protein_coding	three_prime_utr	.	.	Alu	0.070532
5	151268176	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.2
5	151268178	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.09375
5	151268188	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.210526
5	151268256	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0277778
5	151268320	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.039604
5	151268355	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.027027
5	151268584	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.130841
5	151268664	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0892857
5	151268670	A->G	+	ENSG00000196743	GM2A	protein_coding	three_prime_utr	.	.	Alu	0.0964912
5	151745927	A->G	-	ENSG00000177556	ATOX1	protein_coding	three_prime_utr	.	.	Alu	0.181818
5	151806824	A->G	+	ENSG00000145907	G3BP1	protein_coding	three_prime_utr	.	.	Alu	0.0350877
5	154054883	A->G	+	ENSG00000037749	MFAP3	protein_coding	three_prime_utr	.	.	Alu	1
5	157477823	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.65
5	157477845	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.214286
5	157477914	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.590909
5	157477942	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.273973
5	157477944	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.148649
5	157477945	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.16
5	157477957	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.466667
5	157478374	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.138889
5	157478388	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.571429
5	157478389	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.5
5	157478390	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.2
5	157478397	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	157478403	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.157895
5	157478492	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.0833333
5	157478552	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.59375
5	157478553	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.166667
5	157478558	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.344828
5	157478559	A->G	-	ENSG00000135074	ADAM19	protein_coding	three_prime_utr	.	.	Alu	0.419355
5	172043137	A->G	-	ENSG00000072786	STK10	protein_coding	three_prime_utr	.	.	Alu	0.128205
5	172043223	A->G	-	ENSG00000072786	STK10	protein_coding	three_prime_utr	.	.	Alu	0.03125
5	172210363	A->G	-	ENSG00000168246	UBTD2	protein_coding	three_prime_utr	.	.	Alu	0.6
5	175528097	A->G	+	ENSG00000164466	SFXN1	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	106970848	A->G	-	ENSG00000272398	CD24	protein_coding	three_prime_utr	.	.	Alu	0.213115
6	108042167	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.416667
6	108042172	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.125
6	108042197	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.111111
6	108042212	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.1
6	108042214	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.142857
6	108042239	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.6875
6	108042249	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.642857
6	108042252	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.2
6	108042260	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.4
6	108042554	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.15
6	108042610	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.08
6	108042615	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.304348
6	108042617	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0833333
6	108042640	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
6	108042685	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.7
6	108042693	A->G	-	ENSG00000081087	OSTM1	protein_coding	three_prime_utr	.	.	Alu	0.52381
6	109463084	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.0714286
6	109464684	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.3
6	109464694	A->G	-	ENSG00000112365	ZBTB24	protein_coding	three_prime_utr	.	.	Alu	0.166667
6	116244443	A->G	+	ENSG00000236326	AL050331.2	antisense	three_prime_utr	.	.	Alu	0.409091
6	116439867	A->G	+	ENSG00000285446	Z84488.2	protein_coding	three_prime_utr	.	.	Alu	0.257143
6	116440398	A->G	+	ENSG00000285446	Z84488.2	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	118813772	A->G	-	ENSG00000111877	MCM9	protein_coding	three_prime_utr	.	.	Alu	1
6	119178352	A->G	-	ENSG00000111885	MAN1A1	protein_coding	three_prime_utr	.	.	Alu	0.0933333
6	149448100	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.290323
6	149448108	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.0666667
6	149448125	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.0689655
6	149448481	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.0769231
6	149448502	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	149449082	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.47619
6	149449357	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.15625
6	149449361	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.354839
6	149449362	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.357143
6	149449376	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.105263
6	149449382	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.1875
6	149449403	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.8
6	149449711	A->G	-	ENSG00000178199	ZC3H12D	protein_coding	three_prime_utr	.	.	Alu	0.333333
6	149591023	A->G	+	ENSG00000055211	GINM1	protein_coding	three_prime_utr	.	.	Alu	0.0571429
7	102449639	A->G	+	ENSG00000160991	ORAI2	protein_coding	three_prime_utr	.	.	Alu	0.0606061
7	102637154	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.25
7	102637155	A->G	-	ENSG00000267368	UPK3BL1	protein_coding	three_prime_utr	.	.	Alu	0.125
7	106906386	A->G	+	ENSG00000105851	PIK3CG	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	106907006	A->G	+	ENSG00000105851	PIK3CG	protein_coding	three_prime_utr	.	.	Alu	0.0246914
7	128309374	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	128309376	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	128309388	A->G	-	ENSG00000106344	RBM28	protein_coding	three_prime_utr	.	.	Alu	0.25
7	128502839	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	128502843	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.133333
7	128502848	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.4
7	128502863	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.142857
7	128503182	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.210526
7	128503212	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.1875
7	128503281	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.181818
7	128503552	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.363636
7	128503564	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.2
7	128504264	A->G	+	ENSG00000165055	METTL2B	protein_coding	three_prime_utr	.	.	Alu	0.272727
7	139047445	A->G	-	ENSG00000105939	ZC3HAV1	protein_coding	three_prime_utr	.	.	Alu	0.0620155
7	150331699	A->G	+	ENSG00000188707	ZBED6CL	protein_coding	three_prime_utr	.	.	Alu	0.230769
7	156970049	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	156970162	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.153846
7	156971457	A->G	+	ENSG00000146909	NOM1	protein_coding	three_prime_utr	.	.	Alu	0.25
8	103399818	A->G	-	ENSG00000164933	SLC25A32	protein_coding	three_prime_utr	.	.	Alu	0.0363636
8	144880646	A->G	-	ENSG00000196150	ZNF250	protein_coding	three_prime_utr	.	.	Alu	0.2
9	112684270	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0909091
9	112684379	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.263158
9	112685252	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.142857
9	112686645	A->G	-	ENSG00000148153	INIP	protein_coding	three_prime_utr	.	.	Alu	0.0952381
9	113407461	A->G	-	ENSG00000148229	POLE3	protein_coding	three_prime_utr	.	.	Alu	0.403101
9	120817552	A->G	-	ENSG00000095261	PSMD5	protein_coding	three_prime_utr	.	.	Alu	0.0555556
9	128308186	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	128309306	A->G	-	ENSG00000167112	TRUB2	protein_coding	three_prime_utr	.	.	Alu	0.0833333
9	133362696	A->G	-	ENSG00000148248	SURF4	protein_coding	three_prime_utr	.	.	Alu	0.143713
9	134906030	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.153846
9	134906097	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.117647
9	134906139	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
9	134906145	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0909091
9	134906190	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	134906213	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0769231
9	134906845	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0967742
9	134906854	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0454545
9	134906948	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.130435
9	134906964	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.0714286
9	134907010	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.166667
9	134907020	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.428571
9	134907025	A->G	-	ENSG00000085265	FCN1	protein_coding	three_prime_utr	.	.	Alu	0.214286
9	137204418	A->G	-	ENSG00000187713	TMEM203	protein_coding	three_prime_utr	.	.	Alu	0.415094
10	119573281	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.375
10	119573300	A->G	-	ENSG00000151923	TIAL1	protein_coding	three_prime_utr	.	.	Alu	0.363636
10	131912596	A->G	+	ENSG00000175470	PPP2R2D	protein_coding	three_prime_utr	.	.	Alu	1
10	133300332	A->G	-	ENSG00000130640	TUBGCP2	protein_coding	three_prime_utr	.	.	Alu	0.142857
11	108365786	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.1
11	108365852	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0327869
11	108365870	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0405405
11	108367007	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.057971
11	108367031	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0298507
11	108367163	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0512821
11	108367169	A->G	+	ENSG00000149311	ATM	protein_coding	three_prime_utr	.	.	Alu	0.0625
11	118748643	A->G	-	ENSG00000255422	AP002954.1	antisense	three_prime_utr	.	.	Alu	0.0514019
11	119001779	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.1
11	119001795	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.125
11	119001801	A->G	+	ENSG00000186166	CCDC84	protein_coding	three_prime_utr	.	.	Alu	0.555556
11	120488294	A->G	+	ENSG00000196914	ARHGEF12	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	108591203	A->G	-	ENSG00000183160	TMEM119	protein_coding	three_prime_utr	.	.	Alu	0.294118
12	108591205	A->G	-	ENSG00000183160	TMEM119	protein_coding	three_prime_utr	.	.	Alu	0.294118
12	108785188	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0655738
12	108785196	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0338983
12	108785217	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0441176
12	108785245	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0384615
12	108786643	A->G	-	ENSG00000084112	SSH1	protein_coding	three_prime_utr	.	.	Alu	0.0952381
12	112932922	A->G	+	ENSG00000089127	OAS1	protein_coding	three_prime_utr	.	.	Alu	0.291667
12	112932934	A->G	+	ENSG00000089127	OAS1	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	112932943	A->G	+	ENSG00000089127	OAS1	protein_coding	three_prime_utr	.	.	Alu	0.137931
12	113817972	A->G	-	ENSG00000122965	RBM19	protein_coding	three_prime_utr	.	.	Alu	0.133333
12	116714663	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0689655
12	116714673	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.0645161
12	116715184	A->G	-	ENSG00000111412	C12orf49	protein_coding	three_prime_utr	.	.	Alu	0.24
12	120461276	A->G	+	ENSG00000257218	GATC	protein_coding	three_prime_utr	.	.	Alu	0.125
12	121186755	A->G	+	ENSG00000089041	P2RX7	protein_coding	three_prime_utr	.	.	Alu	0.15
12	121186812	A->G	+	ENSG00000089041	P2RX7	protein_coding	three_prime_utr	.	.	Alu	0.0857143
12	121186814	A->G	+	ENSG00000089041	P2RX7	protein_coding	three_prime_utr	.	.	Alu	0.111111
12	121186824	A->G	+	ENSG00000089041	P2RX7	protein_coding	three_prime_utr	.	.	Alu	0.075
12	121186845	A->G	+	ENSG00000089041	P2RX7	protein_coding	three_prime_utr	.	.	Alu	0.0444444
12	121186852	A->G	+	ENSG00000089041	P2RX7	protein_coding	three_prime_utr	.	.	Alu	0.0444444
12	121776866	A->G	-	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.214286
12	121777041	A->G	-	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.1875
12	121777058	A->G	-	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.235294
12	121777280	A->G	-	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.2
12	121777394	A->G	-	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	121777396	A->G	-	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.08
12	121777404	A->G	-	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.0869565
12	121777410	A->G	-	ENSG00000188735	TMEM120B	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	123626021	A->G	-	ENSG00000111361	EIF2B1	protein_coding	three_prime_utr	.	.	Alu	0.411765
12	123626024	A->G	-	ENSG00000111361	EIF2B1	protein_coding	three_prime_utr	.	.	Alu	0.526316
12	123626033	A->G	-	ENSG00000111361	EIF2B1	protein_coding	three_prime_utr	.	.	Alu	0.25
12	123626050	A->G	-	ENSG00000111361	EIF2B1	protein_coding	three_prime_utr	.	.	Alu	0.230769
12	123626064	A->G	-	ENSG00000111361	EIF2B1	protein_coding	three_prime_utr	.	.	Alu	0.25
12	123662022	A->G	+	ENSG00000111358	GTF2H3	protein_coding	three_prime_utr	.	.	Alu	0.423077
12	132721299	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.166667
12	132721437	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0425532
12	132721653	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0714286
12	132722524	A->G	+	ENSG00000247077	PGAM5	protein_coding	three_prime_utr	.	.	Alu	0.0344828
12	132769976	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0606061
12	132770098	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.1
12	132770111	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	132770121	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.105263
12	132772309	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.117647
12	132772326	A->G	-	ENSG00000090615	GOLGA3	protein_coding	three_prime_utr	.	.	Alu	0.0967742
14	100279554	A->G	+	ENSG00000100811	YY1	protein_coding	three_prime_utr	.	.	Alu	0.0697674
14	105049500	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.142857
14	105049513	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.037037
14	105049697	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.0355191
14	105049718	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.0247678
14	105049774	A->G	-	ENSG00000183484	GPR132	protein_coding	three_prime_utr	.	.	Alu	0.0401606
15	101070687	A->G	+	ENSG00000154237	LRRK1	protein_coding	three_prime_utr	.	.	Alu	0.2